The Evolution of Multicellular Complexity: the Role of Relatedness And
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The Evolution of Cooperation a White Paper Prepared for the John Templeton Foundation
The evolution of cooperation A white paper prepared for the John Templeton foundation Contents Introduction - Darwin’s theory of design - The puzzle of cooperation - This review Cooperation across the tree of life - What is cooperation? - Explanations for Cooperation - The success of inclusive fitness - The debate over inclusive fitness - Alternative ways to measure cooperation - Cooperation between species - The social amoeba: the perfect test case for cooperation Cooperation in Humans - What’s special about humans? - Explanations for cooperation in humans - Cooperative games - Inter-personal and cross-cultural differences in cooperation - Psychological systems designed for cooperation - The origins of cooperation in humans - The How: The mechanism of cooperation Conclusion - The puzzle of cooperation revisited - Open questions in cooperation research 1 Introduction You probably take cooperation for granted. You’d be excused for doing so – cooperation is all around us. Children team up to complete a project on time. Neighbours help each other mend fences. Colleagues share ideas and resources. The very fabric of our society is cooperative. We divide up tasks, with farmers producing food, policemen upholding laws, teachers teaching, so that we may all share the benefits of a functioning society without any one person having to master all domains. What’s more, cooperation is logical, at least to you and me. Two hands are better than one, as the saying goes. If you want something another person has, it makes sense that you might share something of your own. Division of labour efficient. If you have a reputation as a cooperative person, others will likely help you down the line. Cooperation is a straightforward way to achieve more than you ever could on your own. -
Timeline of the Evolutionary History of Life
Timeline of the evolutionary history of life This timeline of the evolutionary history of life represents the current scientific theory Life timeline Ice Ages outlining the major events during the 0 — Primates Quater nary Flowers ←Earliest apes development of life on planet Earth. In P Birds h Mammals – Plants Dinosaurs biology, evolution is any change across Karo o a n ← Andean Tetrapoda successive generations in the heritable -50 0 — e Arthropods Molluscs r ←Cambrian explosion characteristics of biological populations. o ← Cryoge nian Ediacara biota – z ← Evolutionary processes give rise to diversity o Earliest animals ←Earliest plants at every level of biological organization, i Multicellular -1000 — c from kingdoms to species, and individual life ←Sexual reproduction organisms and molecules, such as DNA and – P proteins. The similarities between all present r -1500 — o day organisms indicate the presence of a t – e common ancestor from which all known r Eukaryotes o species, living and extinct, have diverged -2000 — z o through the process of evolution. More than i Huron ian – c 99 percent of all species, amounting to over ←Oxygen crisis [1] five billion species, that ever lived on -2500 — ←Atmospheric oxygen Earth are estimated to be extinct.[2][3] Estimates on the number of Earth's current – Photosynthesis Pong ola species range from 10 million to 14 -3000 — A million,[4] of which about 1.2 million have r c been documented and over 86 percent have – h [5] e not yet been described. However, a May a -3500 — n ←Earliest oxygen 2016 -
Studies of the Laboulbeniomycetes: Diversity, Evolution, and Patterns of Speciation
Studies of the Laboulbeniomycetes: Diversity, Evolution, and Patterns of Speciation The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:40049989 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA ! STUDIES OF THE LABOULBENIOMYCETES: DIVERSITY, EVOLUTION, AND PATTERNS OF SPECIATION A dissertation presented by DANNY HAELEWATERS to THE DEPARTMENT OF ORGANISMIC AND EVOLUTIONARY BIOLOGY in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the subject of Biology HARVARD UNIVERSITY Cambridge, Massachusetts April 2018 ! ! © 2018 – Danny Haelewaters All rights reserved. ! ! Dissertation Advisor: Professor Donald H. Pfister Danny Haelewaters STUDIES OF THE LABOULBENIOMYCETES: DIVERSITY, EVOLUTION, AND PATTERNS OF SPECIATION ABSTRACT CHAPTER 1: Laboulbeniales is one of the most morphologically and ecologically distinct orders of Ascomycota. These microscopic fungi are characterized by an ectoparasitic lifestyle on arthropods, determinate growth, lack of asexual state, high species richness and intractability to culture. DNA extraction and PCR amplification have proven difficult for multiple reasons. DNA isolation techniques and commercially available kits are tested enabling efficient and rapid genetic analysis of Laboulbeniales fungi. Success rates for the different techniques on different taxa are presented and discussed in the light of difficulties with micromanipulation, preservation techniques and negative results. CHAPTER 2: The class Laboulbeniomycetes comprises biotrophic parasites associated with arthropods and fungi. -
A Critique of Phanerozoic Climatic Models Involving Changes in The
Earth-Science Reviews 56Ž. 2001 1–159 www.elsevier.comrlocaterearscirev A critique of Phanerozoic climatic models involving changes in the CO2 content of the atmosphere A.J. Boucot a,), Jane Gray b,1 a Department of Zoology, Oregon State UniÕersity, CorÕallis, OR 97331, USA b Department of Biology, UniÕersity of Oregon, Eugene, OR 97403, USA Received 28 April 1998; accepted 19 April 2001 Abstract Critical consideration of varied Phanerozoic climatic models, and comparison of them against Phanerozoic global climatic gradients revealed by a compilation of Cambrian through Miocene climatically sensitive sedimentsŽ evaporites, coals, tillites, lateritic soils, bauxites, calcretes, etc.. suggests that the previously postulated climatic models do not satisfactorily account for the geological information. Nor do many climatic conclusions based on botanical data stand up very well when examined critically. Although this account does not deal directly with global biogeographic information, another powerful source of climatic information, we have tried to incorporate such data into our thinking wherever possible, particularly in the earlier Paleozoic. In view of the excellent correlation between CO2 present in Antarctic ice cores, going back some hundreds of thousands of years, and global climatic gradient, one wonders whether or not the commonly postulated Phanerozoic connection between atmospheric CO2 and global climatic gradient is more coincidence than cause and effect. Many models have been proposed that attempt to determine atmospheric composition and global temperature through geological time, particularly for the Phanerozoic or significant portions of it. Many models assume a positive correlation between atmospheric CO2 and surface temperature, thus viewing changes in atmospheric CO2 as playing the critical role in r regulating climate temperature, but none agree on the levels of atmospheric CO2 through time. -
How the Evolution of Multicellularity Set the Stage for Cancer’
www.nature.com/bjc CORRESPONDENCE Comment on ‘How the evolution of multicellularity set the stage for cancer’ British Journal of Cancer (2018) 119:133–134; https://doi.org/ multicellular and multicellular evolutionary origins rather than 10.1038/s41416-018-0091-0 pure unicellular evolutionary origin. Ceaseless proliferation is the most characteristic feature of cancer. But, this behaviour is rarely adopted by unicellular organisms in nature. In addition to cell communication, cell-to- We read the paper “How the evolution of multicellularity set the substrate and cell-to-cell adhesions, earlier unicellular organisms stage for cancer” with interest, which was published in a recent (prokaryotes and protists) acquired a variety of anti-proliferative issue of the British Journal of Cancer.1 In this paper, the authors capabilities (cell cycle negative regulation, programmed cell underlined that disruption of gene regulatory networks, which death, contact-dependent inhibition, toxin-antitoxin, etc.) through maintain the multicellular state, induces cancer. The atavistic the pseudo-multicellular mode of life and responses to selective model of cancer is undoubtedly effective in integrating many pressure.6,7 Indeed, exponential growth may lead to species parameters in a performing heuristic framework. It hypothesises extinction due to starvation or destruction of the protective that cancer results from a transition from multicellularity to biofilm. Earlier prokaryotes inevitably faced this problem and unicellularity, through an active constrained process. In this natural evolution proposed different solutions to circumvent schema, dysregulation of a set of fundamental points of them, which were thereafter fixed by heredity. vulnerability, which govern multicellularity maintenance, is Trigos et al.1 underlined that many hallmarks of the malignant sufficient to model carcinogenesis. -
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2 State of the World’s Fungi State of the World’s Fungi 2018 2. Fungal tree of life Ester Gayaa , Pepijn W. Kooija , Bryn T. M. Dentingerb, Igor V. Grigorievc, László G. Nagyd, Jason Stajiche, Timothy Cokera, Ilia J. Leitcha a Royal Botanic Gardens, Kew, UK; b Natural History Museum of Utah & School of Biological Sciences, University of Utah, USA; c U.S. Department of Energy Joint Genome Institute, USA; d Biological Research Centre, Hungarian Academy of Sciences, Hungary; e University of California-Riverside, USA 12 Describing the world’s fungi Fungal tree of life How are different species of fungi related to each other? What do we know about the major steps in fungal evolution and when they occurred? What are we doing about filling the knowledge gaps in the fungal tree of life? stateoftheworldsfungi.org/2018/fungal-tree-of-life.html Fungal tree of life 13 DNA data are providing new insights into the major steps that have taken place over the last 1 BILLION YEARS of fungal evolution 14 Describing the world’s fungi phyla[5], which we follow in this volume. In addition, these HOW ARE DIFFERENT SPECIES RELATED data are providing new insights into the major steps that have TO EACH OTHER? THIS SIMPLE YET taken place over the last 1 billion years of fungal evolution[5–7] (see Figure 1). CRITICALLY IMPORTANT QUESTION, 1. The earliest fungi. The earliest fungi are thought to have WHICH IS ROUTINELY ASKED ABOUT evolved around 1 billion years ago and to have been simple, single-celled organisms living in water and reproducing using SPECIES IN ALL KINGDOMS OF LIFE, motile asexual spores (zoospores) propelled by a posterior IS ONE OF THE MOST DIFFICULT TO whip-like structure called the flagellum[8,9]. -
Unit 3 Cells Lesson 6 - Cell Theory What Do Living Things Have in Common?
Unit 3 Cells Lesson 6 - Cell Theory What do living things have in common? Explore and question spontaneous generation, an early belief on the properties of life. Observing Phenomena In the 1600s, this was a recipe for creating mice: Place a dirty shirt in an open container of wheat for 21 days and the wheat will transform into mice. 1) Discuss what you think of this recipe. People may have believed that it worked because they did not notice the mice that were living in and reproducing in the wheat containers and maybe hiding beneath the dirty shirts. Observing Phenomena Another belief of spontaneous generation was that fish formed from the mud of dry river beds. 2) What do you think about the recipe for making fish from the mud of a dried up river bed? Observing Phenomena People believed that these recipes would work because they believed in “spontaneous generation.” 3) Why do you think it is called spontaneous generation? Because a living thing spontaneously came into existence from a mixture of nonliving things. What beliefs about natural phenomena did you have as a young child? For example, some young children might think that clouds are fluffy like cotton balls or the moon is made of cheese. As you have gotten older, how have these beliefs changed as you acquired more knowledge? 4) Discuss why they might have believed these and what has changed people's understanding of living things today. Investigation 1: Categorizing Substances In your notebook, write a list of what you think all living things have in common. -
Cooperation and Conflict During the Unicellular–Multicellular and Prokaryotic–Eukaryotic Transitions
Font-Ch17 8/1/03 6:43 PM Page 195 CHAPTER 17 Cooperation and conflict during the unicellular–multicellular and prokaryotic–eukaryotic transitions Richard E. Michod and Aurora M. Nedelcu Individuals often associate in groups that, under group. Initially, group fitness is taken to be the aver- certain conditions, may evolve into higher-level age of the lower-level fitnesses of its members, but, individuals. It is these conditions and this process as the evolutionary transition proceeds, group fit- of individuation of groups that we wish to under- ness becomes decoupled from the fitness of lower- stand. These groups may involve members of the level components. Witness, for example, colonies of same species or different species. For example, eusocial insects or the cell groups that form organ- under certain conditions bacteria associate to form isms; in these cases, some group members have no a fruiting body, amoebae associate to form a slug- individual fitness (sterile castes, somatic cells) yet like slime mold, solitary cells form a colonial group, this does not detract from the fitness of the group, normally solitary wasps breed cooperatively, birds indeed it is presumed to enhance it. associate to form a colony, and mammals form soci- The essence of an evolutionary transition in indi- eties. Likewise, individuals of different species viduality is that the lower-level individuals must as associate and form symbiotic associations; about it were “relinquish” their “claim” to fitness, that is 2000 million years ago, such an association evolved to flourish and multiply, in favor of the new higher- into the first mitochondriate eukaryotic cell. -
Diversity of Entomopathogens Fungi: Which Groups Conquered
bioRxiv preprint doi: https://doi.org/10.1101/003756; this version posted April 4, 2014. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Diversity of entomopathogens Fungi: Which groups conquered the insect body? João P. M. Araújoa & David P. Hughesb aDepartment of Biology, Penn State University, University Park, Pennsylvania, United States of America. bDepartment of Entomology and Department of Biology, Penn State University, University Park, Pennsylvania, United States of America. [email protected]; [email protected]; Abstract The entomopathogenic Fungi comprise a wide range of ecologically diverse species. This group of parasites can be found distributed among all fungal phyla and as well as among the ecologically similar but phylogenetically distinct Oomycetes or water molds, that belong to a different kingdom (Stramenopila). As a group, the entomopathogenic fungi and water molds parasitize a wide range of insect hosts from aquatic larvae in streams to adult insects of high canopy tropical forests. Their hosts are spread among 18 orders of insects, in all developmental stages such as: eggs, larvae, pupae, nymphs and adults exhibiting completely different ecologies. Such assortment of niches has resulted in these parasites evolving a considerable morphological diversity, resulting in enormous biodiversity, much of which remains unknown. Here we gather together a huge amount of records of these entomopathogens to comparing and describe both their morphologies and ecological traits. These findings highlight a wide range of adaptations that evolved following the evolutionary transition to infecting the most diverse and widespread animals on Earth, the insects. -
Biological Atomism and Cell Theory
Studies in History and Philosophy of Biological and Biomedical Sciences 41 (2010) 202–211 Contents lists available at ScienceDirect Studies in History and Philosophy of Biological and Biomedical Sciences journal homepage: www.elsevier.com/locate/shpsc Biological atomism and cell theory Daniel J. Nicholson ESRC Research Centre for Genomics in Society (Egenis), University of Exeter, Byrne House, St. Germans Road, Exeter EX4 4PJ, UK article info abstract Keywords: Biological atomism postulates that all life is composed of elementary and indivisible vital units. The activ- Biological atomism ity of a living organism is thus conceived as the result of the activities and interactions of its elementary Cell theory constituents, each of which individually already exhibits all the attributes proper to life. This paper sur- Organismal theory veys some of the key episodes in the history of biological atomism, and situates cell theory within this Reductionism tradition. The atomistic foundations of cell theory are subsequently dissected and discussed, together with the theory’s conceptual development and eventual consolidation. This paper then examines the major criticisms that have been waged against cell theory, and argues that these too can be interpreted through the prism of biological atomism as attempts to relocate the true biological atom away from the cell to a level of organization above or below it. Overall, biological atomism provides a useful perspective through which to examine the history and philosophy of cell theory, and it also opens up a new way of thinking about the epistemic decomposition of living organisms that significantly departs from the phys- icochemical reductionism of mechanistic biology. -
Symbiogenesis: the New Principle of Evolution
Symbiogenesis: The New Principle of Evolution Boris Mikhailovich KOZO-POLYANSKY 1924 Translated from Russian and edited by Victor Fet, Marshall University, West Virginia Originally published as Novyi printsip biologii: ocherk teorii simbiogeneza [The New Principle of Biology: An Essay of the Theory of Symbiogenesis], Puchina, Leningrad- Moscow, 147 pp. We have changed the title and taken other liberties with the text with one goal in mind: to communicate Kozo-Polyansky’s brilliant work and to show its relevance to modern biology. Table of Contents Introduction Foreword A few words about Kozo-Polyansky Victor Fet Preface I. Non-cellular organisms (cytodes) and the bioblast 1. Bioblast of bacteria 2. Bioblast of Cyanophyceae, or blue-green “algae” 3. Symbiosis among cytodes 4. Symbiosis of cytodes with unicellular organisms 5. Symbiosis of cytodes with multicellular organisms 6. Cytodes as the ancestral organisms II. Cell and its organelles 1. Chlorophyll granules and other plastids, or trophoplasts (a) Chlorophyll granules in animals [and protists] (b) Chlorophyll granules in plants [and protists] 2. Centrosome 3. Cell nuclei 4. Mitochondria 5. Ergastoplasm 6. Reticular apparatus of Golgi 7. Nerve fibrils of N_mecs 8. Physodes 9. Myofibrils (contractile fibers) 10. Blepharoplast 11. Elaioplasts 12. Aleurone 13. Cytoplasm III. Multicellular organism A. First series of examples Lichens Unions of higher plants Unions of animals Sponge-algae B. Second series of examples Mucous glands in aquatic ferns (Azolla) and hornworts Stem glands of Gunnera Protein leaf glands in plants Coralloid organs of cycads Mycorrhiza (fungus root) in various plants Roots, tubers and flowers of orchids Heather in general, and its root in particular Toxic glands of Lolium temulentum C. -
Intercellular Competition and the Inevitability of Multicellular Aging
Intercellular competition and the inevitability of multicellular aging Paul Nelsona,1 and Joanna Masela aDepartment of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721 Edited by Raghavendra Gadagkar, Indian Institute of Science, Bangalore, India, and approved October 6, 2017 (received for review November 14, 2016) Current theories attribute aging to a failure of selection, due to Aging in multicellular organisms occurs at both the cellular either pleiotropic constraints or declining strength of selection and intercellular levels (17). Multicellular organisms, by definition, after the onset of reproduction. These theories implicitly leave require a high degree of intercellular cooperation to maintain open the possibility that if senescence-causing alleles could be homeostasis. Often, cellular traits required for producing a viable identified, or if antagonistic pleiotropy could be broken, the multicellular phenotype come at a steep cost to individual cells effects of aging might be ameliorated or delayed indefinitely. (14, 18, 19). Conversely, many mutant cells that do not invest in These theories are built on models of selection between multicel- holistic organismal fitness have a selective advantage over cells lular organisms, but a full understanding of aging also requires that do. If intercellular competition occurs, such “cheater” or examining the role of somatic selection within an organism. “defector” cells may proliferate and displace “cooperating” cells, Selection between somatic cells (i.e., intercellular competition) with detrimental consequences for the multicellular organism can delay aging by purging nonfunctioning cells. However, the (20, 21). Cancer, a leading cause of death in humans at rates that fitness of a multicellular organism depends not just on how increase with age, is one obvious manifestation of cheater pro- functional its individual cells are but also on how well cells work liferation (22–24).