Gambierdiscus Species Exhibit Different Epiphytic Behaviors Toward
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Toxicity Screening of a Gambierdiscus Australes Strain from the Western Mediterranean Sea and Identification of a Novel Maitotoxin Analogue
marine drugs Article Toxicity Screening of a Gambierdiscus australes Strain from the Western Mediterranean Sea and Identification of a Novel Maitotoxin Analogue Pablo Estevez 1 , David Castro 1, José Manuel Leão-Martins 1 , Manoëlla Sibat 2 , Angels Tudó 3 , Robert Dickey 4, Jorge Diogene 3 , Philipp Hess 2 and Ana Gago-Martinez 1,* 1 Biomedical Research Centre (CINBIO), Department of Analytical and Food Chemistry, University of Vigo, Campus Universitario de Vigo, 36310 Vigo, Spain; [email protected] (P.E.); [email protected] (D.C.); [email protected] (J.M.L.-M.) 2 Laboratoire Phycotoxines, Ifremer, Rue de l’Île d’Yeu, 44311 Nantes, France; [email protected] (M.S.); [email protected] (P.H.) 3 Marine and Continental Waters Programme, Institut de Recerca i Tecnologies Agroalimentàries (IRTA), Ctra. Poble Nou, km. 5.5, 43540 Sant Carles de la Ràpita, Spain; [email protected] (A.T.); [email protected] (J.D.) 4 Department of Marine Science, Marine Science Institute, University of Texas at Austin, Port Aransas, TX 78373, USA; [email protected] * Correspondence: [email protected]; Tel.: +34-64-734-3417 Abstract: Dinoflagellate species of the genera Gambierdiscus and Fukuyoa are known to produce ciguatera poisoning-associated toxic compounds, such as ciguatoxins, or other toxins, such as Citation: Estevez, P.; Castro, D.; maitotoxins. However, many species and strains remain poorly characterized in areas where they Leão-Martins, J.M.; Sibat, M.; Tudó, were recently identified, such as the western Mediterranean Sea. In previous studies carried out by A.; Dickey, R.; Diogene, J.; Hess, P.; our research group, a G. -
Development of a Quantitative PCR Assay for the Detection And
bioRxiv preprint doi: https://doi.org/10.1101/544247; this version posted February 8, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Development of a quantitative PCR assay for the detection and enumeration of a potentially ciguatoxin-producing dinoflagellate, Gambierdiscus lapillus (Gonyaulacales, Dinophyceae). Key words:Ciguatera fish poisoning, Gambierdiscus lapillus, Quantitative PCR assay, Great Barrier Reef Kretzschmar, A.L.1,2, Verma, A.1, Kohli, G.S.1,3, Murray, S.A.1 1Climate Change Cluster (C3), University of Technology Sydney, Ultimo, 2007 NSW, Australia 2ithree institute (i3), University of Technology Sydney, Ultimo, 2007 NSW, Australia, [email protected] 3Alfred Wegener-Institut Helmholtz-Zentrum fr Polar- und Meeresforschung, Am Handelshafen 12, 27570, Bremerhaven, Germany Abstract Ciguatera fish poisoning is an illness contracted through the ingestion of seafood containing ciguatoxins. It is prevalent in tropical regions worldwide, including in Australia. Ciguatoxins are produced by some species of Gambierdiscus. Therefore, screening of Gambierdiscus species identification through quantitative PCR (qPCR), along with the determination of species toxicity, can be useful in monitoring potential ciguatera risk in these regions. In Australia, the identity, distribution and abundance of ciguatoxin producing Gambierdiscus spp. is largely unknown. In this study we developed a rapid qPCR assay to quantify the presence and abundance of Gambierdiscus lapillus, a likely ciguatoxic species. We assessed the specificity and efficiency of the qPCR assay. The assay was tested on 25 environmental samples from the Heron Island reef in the southern Great Barrier Reef, a ciguatera endemic region, in triplicate to determine the presence and patchiness of these species across samples from Chnoospora sp., Padina sp. -
Morphology, Molecular Phylogeny and Toxinology of Coolia And
Botanica Marina 2019; 62(2): 125–140 Maria Cristina de Queiroz Mendes*, José Marcos de Castro Nunes, Santiago Fraga, Francisco Rodríguez, José Mariano Franco, Pilar Riobó, Suema Branco and Mariângela Menezes Morphology, molecular phylogeny and toxinology of Coolia and Prorocentrum strains isolated from the tropical South Western Atlantic Ocean https://doi.org/10.1515/bot-2018-0053 P. emarginatum by mass spectrometry analyses. However, Received 19 May, 2018; accepted 14 February, 2019; online first hemolytic assays in P. emarginatum and both Coolia strains 13 March, 2019 in this study showed positive results. Abstract: The morphology, molecular phylogeny and toxi- Keywords: Coolia malayensis; Coolia tropicalis; hemolytic nology of two Coolia and one Prorocentrum dinoflagellate assay; LC-HRMS; Prorocentrum emarginatum. strains from Brazil were characterized. They matched with Coolia malayensis and Coolia tropicalis morphotypes, while the Prorocentrum strain fitted well with the morphology of Prorocentrum emarginatum. Complementary identification Introduction by molecular analyses was carried out based on LSU and ITS-5.8S rDNA. Phylogenetic analyses of Coolia strains (D1/ Epibenthic dinoflagellate communities harbor potentially D2 region, LSU rDNA), showed that C. malayensis (strain harmful species that attracted great interest in the last UFBA044) segregated together with sequences of this spe- decades due to their apparent expansion from tropical/ cies from other parts of the world, but diverged earlier in subtropical areas to temperate -
Waterborne Pathogens in Agricultural Watersheds
United States Department of Waterborne Pathogens in Agriculture Natural Resources Agricultural Watersheds Conservation Service Watershed Science by Barry H. Rosen Institute NRCS, Watershed Science Institute School of Natural Resources University of Vermont, Burlington Contents Introduction ..................................................... 1 Pathogens of concern ..................................... 3 Pathogens in the environment .....................22 Control methods............................................ 33 Monitoring and evaluation ........................... 43 Anticipated developments ........................... 47 Summary ........................................................ 48 Glossary .......................................................... 49 References...................................................... 52 With contributions by Richard Croft, Natural Resources Conservation Service (retired) Edward R. Atwill, D.V.M., Ph.D., School of Veterinary Medicine, University of California-Davis, 18830 Road 112, Tulare, California Susan Stehman, V.M.D., Senior Extension Veterinarian, New York State Diagnostic Laboratory, College of Veterinary Medicine, Cornell University, Ithaca, New York Susan Wade, Ph.D., Director Parasitology Laboratory, New York State Diagnostic Laboratory, College of Veterinary Medicine, Cornell University, Ithaca, New York Issued June 2000 The United States Department of Agriculture (USDA) prohibits discrimi- nation in all its programs and activities on the basis of race, color, na- tional origin, gender, -
Protistology an International Journal Vol
Protistology An International Journal Vol. 10, Number 2, 2016 ___________________________________________________________________________________ CONTENTS INTERNATIONAL SCIENTIFIC FORUM «PROTIST–2016» Yuri Mazei (Vice-Chairman) Welcome Address 2 Organizing Committee 3 Organizers and Sponsors 4 Abstracts 5 Author Index 94 Forum “PROTIST-2016” June 6–10, 2016 Moscow, Russia Website: http://onlinereg.ru/protist-2016 WELCOME ADDRESS Dear colleagues! Republic) entitled “Diplonemids – new kids on the block”. The third lecture will be given by Alexey The Forum “PROTIST–2016” aims at gathering Smirnov (Saint Petersburg State University, Russia): the researchers in all protistological fields, from “Phylogeny, diversity, and evolution of Amoebozoa: molecular biology to ecology, to stimulate cross- new findings and new problems”. Then Sandra disciplinary interactions and establish long-term Baldauf (Uppsala University, Sweden) will make a international scientific cooperation. The conference plenary presentation “The search for the eukaryote will cover a wide range of fundamental and applied root, now you see it now you don’t”, and the fifth topics in Protistology, with the major focus on plenary lecture “Protist-based methods for assessing evolution and phylogeny, taxonomy, systematics and marine water quality” will be made by Alan Warren DNA barcoding, genomics and molecular biology, (Natural History Museum, United Kingdom). cell biology, organismal biology, parasitology, diversity and biogeography, ecology of soil and There will be two symposia sponsored by ISoP: aquatic protists, bioindicators and palaeoecology. “Integrative co-evolution between mitochondria and their hosts” organized by Sergio A. Muñoz- The Forum is organized jointly by the International Gómez, Claudio H. Slamovits, and Andrew J. Society of Protistologists (ISoP), International Roger, and “Protists of Marine Sediments” orga- Society for Evolutionary Protistology (ISEP), nized by Jun Gong and Virginia Edgcomb. -
Symbiodinium Genomes Reveal Adaptive Evolution of Functions Related to Coral-Dinoflagellate Symbiosis
Corrected: Publisher correction ARTICLE DOI: 10.1038/s42003-018-0098-3 OPEN Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis Huanle Liu1, Timothy G. Stephens1, Raúl A. González-Pech1, Victor H. Beltran2, Bruno Lapeyre3,4,12, Pim Bongaerts5,6, Ira Cooke4, Manuel Aranda7, David G. Bourne2,8, Sylvain Forêt3,9, David J. Miller3,4, Madeleine J.H. van Oppen2,10, Christian R. Voolstra7, Mark A. Ragan1 & Cheong Xin Chan1,11 1234567890():,; Symbiosis between dinoflagellates of the genus Symbiodinium and reef-building corals forms the trophic foundation of the world’s coral reef ecosystems. Here we present the first draft genome of Symbiodinium goreaui (Clade C, type C1: 1.03 Gbp), one of the most ubiquitous endosymbionts associated with corals, and an improved draft genome of Symbiodinium kawagutii (Clade F, strain CS-156: 1.05 Gbp) to further elucidate genomic signatures of this symbiosis. Comparative analysis of four available Symbiodinium genomes against other dinoflagellate genomes led to the identification of 2460 nuclear gene families (containing 5% of Symbiodinium genes) that show evidence of positive selection, including genes involved in photosynthesis, transmembrane ion transport, synthesis and modification of amino acids and glycoproteins, and stress response. Further, we identify extensive sets of genes for meiosis and response to light stress. These draft genomes provide a foundational resource for advancing our understanding of Symbiodinium biology and the coral-algal symbiosis. 1 Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia. 2 Australian Institute of Marine Science, Townsville, QLD 4810, Australia. 3 ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, QLD 4811, Australia. -
Key Factors Influencing the Occurrence and Frequency of Ciguatera
ResearchOnline@JCU This file is part of the following work: Sparrow, Leanne (2017) Key factors influencing the occurrence and frequency of ciguatera. PhD Thesis, James Cook University. Access to this file is available from: https://doi.org/10.25903/5d48bba175630 Copyright © 2017 Leanne Sparrow. The author has certified to JCU that they have made a reasonable effort to gain permission and acknowledge the owners of any third party copyright material included in this document. If you believe that this is not the case, please email [email protected] SPARROW, LEANNE B.Arts – Town Planning B.Sc – Marine Biology; M.App.Sc – Phycology KEY FACTORS INFLUENCING THE OCCURRENCE AND FREQUENCY OF CIGUATERA Doctor of Philosophy College of Science and Engineering James Cook University Submitted: 30 July 2017 Acknowledgements The production of this thesis is the end of a long and challenging journey. While I have endured numerous challenges, I have also gained so much more in experiences along the way – there have been so many wonderful people that I had the fortune to meet through tutoring, work and research. Firstly, I would like to acknowledge my supervisors for their support and contributions to experimental design and editorial advice. In particular I would like to thank Kirsten Heimann, apart from her intellectual guidance and support, she has provided emotional, financial, mentoring and friendship over the years prior and during this research – thank you. I would also like to thank Garry Russ and Leone Bielig for the guidance and the supportive chats that kept me sane towards the end. Out in the field the support and interest of the then managers, Kylie and Rob at Orpheus Island Research Station was greatly appreciated. -
Further Advance of Gambierdiscus Species in the Canary Islands, with the First Report of Gambierdiscus Belizeanus
toxins Article Further Advance of Gambierdiscus Species in the Canary Islands, with the First Report of Gambierdiscus belizeanus Àngels Tudó 1, Greta Gaiani 1, Maria Rey Varela 1 , Takeshi Tsumuraya 2 , Karl B. Andree 1, Margarita Fernández-Tejedor 1 ,Mònica Campàs 1 and Jorge Diogène 1,* 1 Institut de Recerca i Tecnologies Agroalimentàries (IRTA), Ctra. Poble Nou Km 5.5, Sant Carles de la Ràpita, 43540 Tarragona, Spain; [email protected] (À.T.); [email protected] (G.G.); [email protected] (M.R.V.); [email protected] (K.B.A.); [email protected] (M.F.-T.); [email protected] (M.C.) 2 Department of Biological Science, Graduate School of Science, Osaka Prefecture University, Osaka 599-8570, Japan; [email protected] * Correspondence: [email protected] Received: 22 September 2020; Accepted: 27 October 2020; Published: 31 October 2020 Abstract: Ciguatera Poisoning (CP) is a human food-borne poisoning that has been known since ancient times to be found mainly in tropical and subtropical areas, which occurs when fish or very rarely invertebrates contaminated with ciguatoxins (CTXs) are consumed. The genus of marine benthic dinoflagellates Gambierdiscus produces CTX precursors. The presence of Gambierdiscus species in a region is one indicator of CP risk. The Canary Islands (North Eastern Atlantic Ocean) is an area where CP cases have been reported since 2004. In the present study, samplings for Gambierdiscus cells were conducted in this area during 2016 and 2017. Gambierdiscus cells were isolated and identified as G. australes, G. excentricus, G. caribaeus, and G. -
Mixotrophy Among Dinoflagellates1
J Eukaryn Microbiol.. 46(4). 1999 pp. 397-401 0 1999 by the Society of Protozoologists Mixotrophy among Dinoflagellates’ DIANE K. STOECKER University of Maryland Center for Environmentul Science, Horn Point Laboratory, P.O. Box 775, Cambridge, Marylund 21613, USA ABSTRACT. Mixotrophy, used herein for the combination of phototrophy and phagotrophy, is widespread among dinoflagellates. It occurs among most, perhaps all, of the extant orders, including the Prorocentrales, Dinophysiales, Gymnodiniales, Noctilucales, Gon- yaulacales, Peridiniales, Blastodiniales, Phytodiniales, and Dinamoebales. Many cases of mixotrophy among dinoflagellates are probably undocumented. Primarily photosynthetic dinoflagellates with their “own” plastids can often supplement their nutrition by preying on other cells. Some primarily phagotrophic species are photosynthetic due to the presence of kleptochloroplasts or algal endosymbionts. Some parasitic dinoflagellates have plastids and are probably mixotrophic. For most mixotrophic dinoflagellates, the relative importance of photosynthesis, uptake of dissolved inorganic nutrients, and feeding are unknown. However, it is apparent that mixotrophy has different functions in different physiological types of dinoflagellates. Data on the simultaneous regulation of photosynthesis, assimilation of dissolved inorganic and organic nutrients, and phagotophy by environmental parameters (irradiance, availablity of dissolved nutrients, availability of prey) and by life history events are needed in order to understand the diverse -
Scrippsiella Trochoidea (F.Stein) A.R.Loebl
MOLECULAR DIVERSITY AND PHYLOGENY OF THE CALCAREOUS DINOPHYTES (THORACOSPHAERACEAE, PERIDINIALES) Dissertation zur Erlangung des Doktorgrades der Naturwissenschaften (Dr. rer. nat.) der Fakultät für Biologie der Ludwig-Maximilians-Universität München zur Begutachtung vorgelegt von Sylvia Söhner München, im Februar 2013 Erster Gutachter: PD Dr. Marc Gottschling Zweiter Gutachter: Prof. Dr. Susanne Renner Tag der mündlichen Prüfung: 06. Juni 2013 “IF THERE IS LIFE ON MARS, IT MAY BE DISAPPOINTINGLY ORDINARY COMPARED TO SOME BIZARRE EARTHLINGS.” Geoff McFadden 1999, NATURE 1 !"#$%&'(&)'*!%*!+! +"!,-"!'-.&/%)$"-"!0'* 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 2& ")3*'4$%/5%6%*!+1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 7! 8,#$0)"!0'*+&9&6"*,+)-08!+ 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 :! 5%*%-"$&0*!-'/,)!0'* 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 ;! "#$!%"&'(!)*+&,!-!"#$!'./+,#(0$1$!2! './+,#(0$1$!-!3+*,#+4+).014!1/'!3+4$0&41*!041%%.5.01".+/! 67! './+,#(0$1$!-!/&"*.".+/!1/'!4.5$%"(4$! 68! ./!5+0&%!-!"#$!"#+*10+%,#1$*10$1$! 69! "#+*10+%,#1$*10$1$!-!5+%%.4!1/'!$:"1/"!'.;$*%."(! 6<! 3+4$0&41*!,#(4+)$/(!-!0#144$/)$!1/'!0#1/0$! 6=! 1.3%!+5!"#$!"#$%.%! 62! /0+),++0'* 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111<=! -
Molecular Identification of Gambierdiscus and Fukuyoa
marine drugs Short Note Molecular Identification of Gambierdiscus and Fukuyoa (Dinophyceae) from Environmental Samples Kirsty F. Smith 1,*, Laura Biessy 1, Phoebe A. Argyle 1,2, Tom Trnski 3, Tuikolongahau Halafihi 4 and Lesley L. Rhodes 1 1 Coastal & Freshwater Group, Cawthron Institute, Private Bag 2, 98 Halifax Street East, Nelson 7042, New Zealand; [email protected] (L.B.); [email protected] (P.A.A.); [email protected] (L.L.R.) 2 School of Biological Sciences, University of Canterbury, Private Bag 4800, 20 Kirkwood Avenue, Christchurch 8041, New Zealand 3 Auckland War Memorial Museum, Private Bag 92018, Victoria Street West, Auckland 1142, New Zealand; [email protected] 4 Ministry of Fisheries, P.O. Box 871, Nuku’alofa, Tongatapu, Tonga; [email protected] * Correspondence: [email protected]; Tel.: +64-3-548-2319 Received: 30 March 2017; Accepted: 28 July 2017; Published: 2 August 2017 Abstract: Ciguatera Fish Poisoning (CFP) is increasing across the Pacific and the distribution of the causative dinoflagellates appears to be expanding. Subtle differences in thecal plate morphology are used to distinguish dinoflagellate species, which are difficult to determine using light microscopy. For these reasons we sought to develop a Quantitative PCR assay that would detect all species from both Gambierdiscus and Fukuyoa genera in order to rapidly screen environmental samples for potentially toxic species. Additionally, a specific assay for F. paulensis was developed as this species is of concern in New Zealand coastal waters. Using the assays we analyzed 31 samples from three locations around New Zealand and the Kingdom of Tonga. -
A New Marine Benthic Dinoflagellate from Martinique Island, Eastern
European Journal of Phycology Archimer April 2014, Volume 49, Issue 2, Pages 165-178 http://archimer.ifremer.fr http://dx.doi.org/10.1080/09670262.2014.898797 © 2014 British Phycological Society The original publication is available at http://www.tandf.co.uk/journals/ is available on the publisher Web site Web publisher the on available is Madanidinium loirii gen. et sp. nov. (Dinophyceae), a new marine benthic dinoflagellate from Martinique Island, Eastern Caribbean Nicolas Chomérat* and Gwenaël Bilien authenticated version authenticated - IFREMER, LER Bretagne-Occidentale, Station de biologie marine, Place de la Croix, 29900 Concarneau, France *: Corresponding author : Nicolas Chomérat, email address : [email protected] Abstract: review. The definitive publisher definitive The review. A new benthic phototrophic dinoflagellate is described from sediments of a tropical marine cove at Martinique Island and its micromorphology is studied by means of light and electron microscopy. The cell contains small golden-brown chloroplasts and the oval nucleus is posterior. It is laterally compressed, almost circular in shape when viewed laterally. It consists of a small epitheca tilted toward the right lateral side and a larger hypotheca. In the left view, the cingulum is more anterior and the epitheca is reduced. The cingulum is displaced and left-handed. This organism is peculiar in having no apical pore and its thecal plate arrangement is 2′ 1a 7′′ 5c 3s 5′′′ 1′′′′. The plates are smooth with small groups of pores scattered on their surface. An area with 60–80 densely arranged pores is found near the centre of the 2′′′ plate, on the left lateral side.