A Visual Identification Key to Orchidaceae of Korea
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A Comparative Study on the Reproductive Success of Two Rewarding Habenaria Species
Zhang and Gao BMC Plant Biology (2021) 21:187 https://doi.org/10.1186/s12870-021-02968-w RESEARCH ARTICLE Open Access A comparative study on the reproductive success of two rewarding Habenaria species (Orchidaceae) occurring in roadside verge habitats Wenliu Zhang1,2 and Jiangyun Gao1,2* Abstract Background: Most orchid species have been shown to be severely pollination limited, and the factors affecting reproductive success have been widely studied. However, the factors determining the reproductive success vary from species to species. Habenaria species typically produce nectar but exhibit variable fruit set and reproductive success among species. Here, we investigated the influence of the flowering plant density, inflorescence size, breeding system, and pollinator behaviour on the reproductive success of two rewarding Habenaria species. Results: Our observations indicated that Habenaria limprichtii and H. petelotii co-occur in roadside verge habitats and present overlapping flowering periods. Both species were pollination limited, although H. limprichtii produced more fruits than H. petelotii under natural conditions during the 3-year investigation. H. petelotii individuals formed distinct patches along roadsides, while nearly all H. limprichtii individuals clustered together. The bigger floral display and higher nectar sugar concentration in H. limprichtii resulted in increased attraction and visits from pollinators. Three species of effective moths pollinated for H. limprichtii, while Thinopteryx delectans (Geometridae) was the exclusive pollinator of H. petelotii. The percentage of viable seeds was significantly lower for hand geitonogamy than for hand cross-pollination in both species. However, H. limprichtii may often be geitonogamously pollinated based on the behaviours of the pollinators and viable embryo assessment. -
Bletilla Striata (Orchidaceae) Seed Coat Restricts the Invasion of Fungal Hyphae at the Initial Stage of Fungal Colonization
plants Article Bletilla striata (Orchidaceae) Seed Coat Restricts the Invasion of Fungal Hyphae at the Initial Stage of Fungal Colonization Chihiro Miura 1, Miharu Saisho 1, Takahiro Yagame 2, Masahide Yamato 3 and Hironori Kaminaka 1,* 1 Faculty of Agriculture, Tottori University, 4-101 Koyama Minami, Tottori 680-8553, Japan 2 Mizuho Kyo-do Museum, 316-5 Komagatafujiyama, Mizuho, Tokyo 190-1202, Japan 3 Faculty of Education, Chiba University, 1-33 Yayoicho, Inage-ku, Chiba 263-8522, Japan * Correspondence: [email protected]; Tel.: +81-857-31-5378 Received: 24 June 2019; Accepted: 8 August 2019; Published: 11 August 2019 Abstract: Orchids produce minute seeds that contain limited or no endosperm, and they must form an association with symbiotic fungi to obtain nutrients during germination and subsequent seedling growth under natural conditions. Orchids need to select an appropriate fungus among diverse soil fungi at the germination stage. However, there is limited understanding of the process by which orchids recruit fungal associates and initiate the symbiotic interaction. This study aimed to better understand this process by focusing on the seed coat, the first point of fungal attachment. Bletilla striata seeds, some with the seed coat removed, were prepared and sown with symbiotic fungi or with pathogenic fungi. The seed coat-stripped seeds inoculated with the symbiotic fungi showed a lower germination rate than the intact seeds, and proliferated fungal hyphae were observed inside and around the stripped seeds. Inoculation with the pathogenic fungi increased the infection rate in the seed coat-stripped seeds. The pathogenic fungal hyphae were arrested at the suspensor side of the intact seeds, whereas the seed coat-stripped seeds were subjected to severe infestation. -
Phylogenetic Placement of the Enigmatic Orchid Genera Thaia and Tangtsinia: Evidence from Molecular and Morphological Characters
TAXON 61 (1) • February 2012: 45–54 Xiang & al. • Phylogenetic placement of Thaia and Tangtsinia Phylogenetic placement of the enigmatic orchid genera Thaia and Tangtsinia: Evidence from molecular and morphological characters Xiao-Guo Xiang,1 De-Zhu Li,2 Wei-Tao Jin,1 Hai-Lang Zhou,1 Jian-Wu Li3 & Xiao-Hua Jin1 1 Herbarium & State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, P.R. China 2 Key Laboratory of Biodiversity and Biogeography, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650204, P.R. China 3 Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun Township, Mengla County, Yunnan province 666303, P.R. China Author for correspondence: Xiao-Hua Jin, [email protected] Abstract The phylogenetic position of two enigmatic Asian orchid genera, Thaia and Tangtsinia, were inferred from molecular data and morphological evidence. An analysis of combined plastid data (rbcL + matK + psaB) using Bayesian and parsimony methods revealed that Thaia is a sister group to the higher epidendroids, and tribe Neottieae is polyphyletic unless Thaia is removed. Morphological evidence, such as plicate leaves and corms, the structure of the gynostemium and the micromorphol- ogy of pollinia, also indicates that Thaia should be excluded from Neottieae. Thaieae, a new tribe, is therefore tentatively established. Using Bayesian and parsimony methods, analyses of combined plastid and nuclear datasets (rbcL, matK, psaB, trnL-F, ITS, Xdh) confirmed that the monotypic genus Tangtsinia was nested within and is synonymous with the genus Cepha- lanthera, in which an apical stigma has evolved independently at least twice. -
57. CEPHALANTHERA Richard, De Orchid. Eur. 21, 29, 38. 1817. 头蕊兰属 Tou Rui Lan Shu Chen Xinqi (陈心启 Chen Sing-Chi); Stephan W
Flora of China 25: 174–177. 2009. 57. CEPHALANTHERA Richard, De Orchid. Eur. 21, 29, 38. 1817. 头蕊兰属 tou rui lan shu Chen Xinqi (陈心启 Chen Sing-chi); Stephan W. Gale, Phillip J. Cribb Callithronum Ehrhart; Dorycheile Reichenbach; Eburophyton A. Heller; Xiphophyllum Ehrhart. Herbs, terrestrial, autotrophic or holomycotrophic. Rhizome creeping, cylindric, slender; roots fasciculate, filiform, fleshy, usually numerous though few in holomycotrophic species. Stem erect, unbranched, leafy, with 1 to a few subcymbiform or cylindric basal sheaths. Leaves alternate, plicate, sessile, directly sheathing stem at base, reduced to membranous sheaths in holomycotrophic species. Inflorescence terminal, racemose, many or few flowered, rarely 1-flowered; proximal floral bracts foliaceous and usually longer than flowers, distal ones much shorter. Flowers resupinate, suberect, weakly spreading and campanulate, or rarely widely spreading, white, pink, or yellow; ovary slightly twisted, glabrous. Sepals free, similar to each other, subequal. Petals slightly shorter than sepals, ± connivent with sepals; lip adnate to base of column, 2-partite or rarely simple and not distinct from petals in peloric forms; hypochile with erect lateral lobes embracing column, saccate or with a short spur at base; epichile spreading, ovate-elliptic, apex obtuse or acute; disk with 3–7 longitudinal lamellae, or unornamented in peloric forms. Column erect, usually with 2 narrow lateral wings; anther erect, hinged, 2-locular; pollinia 2, each 2-partite, granular-farinaceous, lacking caudicles and viscidia; stigma concave, rounded; rostellum inconspicuous or absent. Capsule erect. About 15 species: mainly in Europe, N Africa, and E Asia, but also in the Himalayas, SE Asia, and extending to the west coast of North America; nine species (four endemic) in China. -
Phylogenetic Relationships of Rhizoctonia Fungi Within the Cantharellales
fungal biology 120 (2016) 603e619 journal homepage: www.elsevier.com/locate/funbio Phylogenetic relationships of Rhizoctonia fungi within the Cantharellales Dolores GONZALEZa,*, Marianela RODRIGUEZ-CARRESb, Teun BOEKHOUTc, Joost STALPERSc, Eiko E. KURAMAEd, Andreia K. NAKATANIe, Rytas VILGALYSf, Marc A. CUBETAb aInstituto de Ecologıa, A.C., Red de Biodiversidad y Sistematica, Carretera Antigua a Coatepec No. 351, El Haya, 91070 Xalapa, Veracruz, Mexico bDepartment of Plant Pathology, North Carolina State University, Center for Integrated Fungal Research, Campus Box 7251, Raleigh, NC 27695, USA cCBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands dDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO/KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands eUNESP, Faculdade de Ci^encias Agronomicas,^ CP 237, 18603-970 Botucatu, SP, Brazil fDepartment of Biology, Duke University, Durham, NC 27708, USA article info abstract Article history: Phylogenetic relationships of Rhizoctonia fungi within the order Cantharellales were studied Received 2 January 2015 using sequence data from portions of the ribosomal DNA cluster regions ITS-LSU, rpb2, tef1, Received in revised form and atp6 for 50 taxa, and public sequence data from the rpb2 locus for 165 taxa. Data sets 1 January 2016 were analysed individually and combined using Maximum Parsimony, Maximum Likeli- Accepted 19 January 2016 hood, and Bayesian Phylogenetic Inference methods. All analyses supported the mono- Available online 29 January 2016 phyly of the family Ceratobasidiaceae, which comprises the genera Ceratobasidium and Corresponding Editor: Thanatephorus. Multi-locus analysis revealed 10 well-supported monophyletic groups that Joseph W. Spatafora were consistent with previous separation into anastomosis groups based on hyphal fusion criteria. -
Review of Selected Species Subject to Long- Standing Import Suspensions
UNEP-WCMC technical report Review of selected species subject to long- standing import suspensions Part II: Asia and Oceania (Version edited for public release) Review of selected species subject to long-standing import suspensions. Part II: Asia and Oceania Prepared for The European Commission, Directorate General Environment, Directorate E - Global & Regional Challenges, LIFE ENV.E.2. – Global Sustainability, Trade & Multilateral Agreements, Brussels, Belgium Prepared February 2016 Copyright European Commission 2016 Citation UNEP-WCMC. 2016. Review of selected species subject to long-standing import suspensions. Part II: Asia and Oceania. UNEP-WCMC, Cambridge. The UNEP World Conservation Monitoring Centre (UNEP-WCMC) is the specialist biodiversity assessment of the United Nations Environment Programme, the world’s foremost intergovernmental environmental organization. The Centre has been in operation for over 30 years, combining scientific research with policy advice and the development of decision tools. We are able to provide objective, scientifically rigorous products and services to help decision- makers recognize the value of biodiversity and apply this knowledge to all that they do. To do this, we collate and verify data on biodiversity and ecosystem services that we analyze and interpret in comprehensive assessments, making the results available in appropriate forms for national and international level decision-makers and businesses. To ensure that our work is both sustainable and equitable we seek to build the capacity of partners -
Fungal Diversity Driven by Bark Features Affects Phorophyte
www.nature.com/scientificreports OPEN Fungal diversity driven by bark features afects phorophyte preference in epiphytic orchids from southern China Lorenzo Pecoraro1*, Hanne N. Rasmussen2, Sofa I. F. Gomes3, Xiao Wang1, Vincent S. F. T. Merckx3, Lei Cai4 & Finn N. Rasmussen5 Epiphytic orchids exhibit varying degrees of phorophyte tree specifcity. We performed a pilot study to investigate why epiphytic orchids prefer or avoid certain trees. We selected two orchid species, Panisea unifora and Bulbophyllum odoratissimum co-occurring in a forest habitat in southern China, where they showed a specifc association with Quercus yiwuensis and Pistacia weinmannifolia trees, respectively. We analysed a number of environmental factors potentially infuencing the relationship between orchids and trees. Diference in bark features, such as water holding capacity and pH were recorded between Q. yiwuensis and P. weinmannifolia, which could infuence both orchid seed germination and fungal diversity on the two phorophytes. Morphological and molecular culture-based methods, combined with metabarcoding analyses, were used to assess fungal communities associated with studied orchids and trees. A total of 162 fungal species in 74 genera were isolated from bark samples. Only two genera, Acremonium and Verticillium, were shared by the two phorophyte species. Metabarcoding analysis confrmed the presence of signifcantly diferent fungal communities on the investigated tree and orchid species, with considerable similarity between each orchid species and its host tree, suggesting that the orchid-host tree association is infuenced by the fungal communities of the host tree bark. Epiphytism is one of the most common examples of commensalism occurring in terrestrial environments, which provides advantages, such as less competition and increased access to light, protection from terrestrial herbivores, and better fower exposure to pollinators and seed dispersal 1,2. -
Chapter 4 Phytogeography of Northeast Asia
Chapter 4 Phytogeography of Northeast Asia Hong QIAN 1, Pavel KRESTOV 2, Pei-Yun FU 3, Qing-Li WANG 3, Jong-Suk SONG 4 and Christine CHOURMOUZIS 5 1 Research and Collections Center, Illinois State Museum, 1011 East Ash Street, Springfield, IL 62703, USA, e-mail: [email protected]; 2 Institute of Biology and Soil Science, Russian Academy of Sciences, Vladivostok, 690022, Russia, e-mail: [email protected]; 3 Institute of Applied Ecology, Chinese Academy of Sciences, P.O. Box 417, Shenyang 110015, China; 4 Department of Biological Science, College of Natural Sciences, Andong National University, Andong 760-749, Korea, e-mail: [email protected]; 5 Department of Forest Sciences, University of British Columbia, 3041-2424 mail Mall, Vancouver, B.C., V6T 1Z4, Canada, e-mail: [email protected] Abstract: Northeast Asia as defined in this study includes the Russian Far East, Northeast China, the northern part of the Korean Peninsula, and Hokkaido Island (Japan). We determined the species richness of Northeast Asia at various spatial scales, analyzed the floristic relationships among geographic regions within Northeast Asia, and compared the flora of Northeast Asia with surrounding floras. The flora of Northeast Asia consists of 971 genera and 4953 species of native vascular plants. Based on their worldwide distributions, the 971 gen- era were grouped into fourteen phytogeographic elements. Over 900 species of vascular plants are endemic to Northeast Asia. Northeast Asia shares 39% of its species with eastern Siberia-Mongolia, 24% with Europe, 16.2% with western North America, and 12.4% with eastern North America. -
Alternative Translation Initiation Codons for the Plastid Maturase Matk: Unraveling the Pseudogene Misconception in the Orchidaceae Michelle M
Barthet et al. BMC Evolutionary Biology (2015) 15:210 DOI 10.1186/s12862-015-0491-1 RESEARCH ARTICLE Open Access Alternative translation initiation codons for the plastid maturase MatK: unraveling the pseudogene misconception in the Orchidaceae Michelle M. Barthet1,2* , Keenan Moukarzel3, Kayla N. Smith1, Jaimin Patel3 and Khidir W. Hilu3 Abstract Background: The plastid maturase MatK has been implicated as a possible model for the evolutionary “missing link” between prokaryotic and eukaryotic splicing machinery. This evolutionary implication has sparked investigations concerning the function of this unusual maturase. Intron targets of MatK activity suggest that this is an essential enzyme for plastid function. The matK gene, however, is described as a pseudogene in many photosynthetic orchid species due to presence of premature stop codons in translations, and its high rate of nucleotide and amino acid substitution. Results: Sequence analysis of the matK gene from orchids identified an out-of-frame alternative AUG initiation codon upstream from the consensus initiation codon used for translation in other angiosperms. We demonstrate translation from the alternative initiation codon generates a conserved MatK reading frame. We confirm that MatK protein is expressed and functions in sample orchids currently described as having a matK pseudogene using immunodetection and reverse-transcription methods. We demonstrate using phylogenetic analysis that this alternative initiation codon emerged de novo within the Orchidaceae, with several reversal events at the basal lineage and deep in orchid history. Conclusion: These findings suggest a novel evolutionary shift for expression of matK in the Orchidaceae and support the function of MatK as a group II intron maturase in the plastid genome of land plants including the orchids. -
Orchid Historical Biogeography, Diversification, Antarctica and The
Journal of Biogeography (J. Biogeogr.) (2016) ORIGINAL Orchid historical biogeography, ARTICLE diversification, Antarctica and the paradox of orchid dispersal Thomas J. Givnish1*, Daniel Spalink1, Mercedes Ames1, Stephanie P. Lyon1, Steven J. Hunter1, Alejandro Zuluaga1,2, Alfonso Doucette1, Giovanny Giraldo Caro1, James McDaniel1, Mark A. Clements3, Mary T. K. Arroyo4, Lorena Endara5, Ricardo Kriebel1, Norris H. Williams5 and Kenneth M. Cameron1 1Department of Botany, University of ABSTRACT Wisconsin-Madison, Madison, WI 53706, Aim Orchidaceae is the most species-rich angiosperm family and has one of USA, 2Departamento de Biologıa, the broadest distributions. Until now, the lack of a well-resolved phylogeny has Universidad del Valle, Cali, Colombia, 3Centre for Australian National Biodiversity prevented analyses of orchid historical biogeography. In this study, we use such Research, Canberra, ACT 2601, Australia, a phylogeny to estimate the geographical spread of orchids, evaluate the impor- 4Institute of Ecology and Biodiversity, tance of different regions in their diversification and assess the role of long-dis- Facultad de Ciencias, Universidad de Chile, tance dispersal (LDD) in generating orchid diversity. 5 Santiago, Chile, Department of Biology, Location Global. University of Florida, Gainesville, FL 32611, USA Methods Analyses use a phylogeny including species representing all five orchid subfamilies and almost all tribes and subtribes, calibrated against 17 angiosperm fossils. We estimated historical biogeography and assessed the -
PC22 Doc. 22.1 Annex (In English Only / Únicamente En Inglés / Seulement En Anglais)
Original language: English PC22 Doc. 22.1 Annex (in English only / únicamente en inglés / seulement en anglais) Quick scan of Orchidaceae species in European commerce as components of cosmetic, food and medicinal products Prepared by Josef A. Brinckmann Sebastopol, California, 95472 USA Commissioned by Federal Food Safety and Veterinary Office FSVO CITES Management Authorithy of Switzerland and Lichtenstein 2014 PC22 Doc 22.1 – p. 1 Contents Abbreviations and Acronyms ........................................................................................................................ 7 Executive Summary ...................................................................................................................................... 8 Information about the Databases Used ...................................................................................................... 11 1. Anoectochilus formosanus .................................................................................................................. 13 1.1. Countries of origin ................................................................................................................. 13 1.2. Commercially traded forms ................................................................................................... 13 1.2.1. Anoectochilus Formosanus Cell Culture Extract (CosIng) ............................................ 13 1.2.2. Anoectochilus Formosanus Extract (CosIng) ................................................................ 13 1.3. Selected finished -
Phylogeny, Character Evolution and the Systematics of Psilochilus (Triphoreae)
THE PRIMITIVE EPIDENDROIDEAE (ORCHIDACEAE): PHYLOGENY, CHARACTER EVOLUTION AND THE SYSTEMATICS OF PSILOCHILUS (TRIPHOREAE) A Dissertation Presented in Partial Fulfillment of the Requirements for The Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Erik Paul Rothacker, M.Sc. ***** The Ohio State University 2007 Doctoral Dissertation Committee: Approved by Dr. John V. Freudenstein, Adviser Dr. John Wenzel ________________________________ Dr. Andrea Wolfe Adviser Evolution, Ecology and Organismal Biology Graduate Program COPYRIGHT ERIK PAUL ROTHACKER 2007 ABSTRACT Considering the significance of the basal Epidendroideae in understanding patterns of morphological evolution within the subfamily, it is surprising that no fully resolved hypothesis of historical relationships has been presented for these orchids. This is the first study to improve both taxon and character sampling. The phylogenetic study of the basal Epidendroideae consisted of two components, molecular and morphological. A molecular phylogeny using three loci representing each of the plant genomes including gap characters is presented for the basal Epidendroideae. Here we find Neottieae sister to Palmorchis at the base of the Epidendroideae, followed by Triphoreae. Tropidieae and Sobralieae form a clade, however the relationship between these, Nervilieae and the advanced Epidendroids has not been resolved. A morphological matrix of 40 taxa and 30 characters was constructed and a phylogenetic analysis was performed. The results support many of the traditional views of tribal composition, but do not fully resolve relationships among many of the tribes. A robust hypothesis of relationships is presented based on the results of a total evidence analysis using three molecular loci, gap characters and morphology. Palmorchis is placed at the base of the tree, sister to Neottieae, followed successively by Triphoreae sister to Epipogium, then Sobralieae.