The Application of Scientific Names to Plants in Cultivation: Salix ×Cottetii Lagger Ex A.Kern. (Salicaceae)
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Molecular Phylogenetics of Turkish Salix L. Species A
MOLECULAR PHYLOGENETICS OF TURKISH SALIX L. SPECIES A THESIS SUBMITTED TO THE GRADUATE SCHOOL OF NATURAL AND APPLIED SCIENCES OF MIDDLE EAST TECHNICAL UNIVERSITY BY PELİN ACAR IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN BIOLOGY MAY 2017 Approval of the Thesis: MOLECULAR PHYLOGENETICS OF TURKISH SALIX L. SPECIES Submitted by PELİN ACAR in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biology Department, Middle East Technical University by, Prof. Dr. Gülbin Dural Ünver _______________ Dean, Graduate School of Natural and Applied Sciences Prof. Dr. Orhan Adalı _______________ Head of the Department, Biological Sciences Prof. Dr. Zeki Kaya _______________ Supervisor, Biology Dept., METU Examining Committee Members: Prof.Dr. Musa Doğan _______________ Biology Dept., METU Prof. Dr. Zeki Kaya _______________ Biology Dept., METU Prof. Dr. Sertaç Önde _______________ Biology Dept., METU Prof. Dr. Emine Sümer Aras _______________ Biology Dept., Ankara University Prof. Dr. İrfan Kandemir _______________ Biology Dept., Ankara University Date:05/05/2017 I hereby declare that all information in this document has been obtained and presented in accordance with academic rules and ethical conduct. I also declare that, as required by these rules and conduct, I have fully cited and referenced all material and results that are not original to this work. Name, Last name : Pelin Acar Signature : iv ABSTRACT MOLECULAR PHYLOGENETICS OF TURKISH SALIX L. SPECIES ACAR, Pelin Ph.D., Department of Biological Sciences Supervisor: Prof. Dr. Zeki KAYA May 2017, 123 Pages Chloroplast (trnT-F, matK and rbcL) and nuclear genome (ITS) regions were used to explore the evolutionary relationships of Salix species which are native to Turkey. -
Salix L.) in the European Alps
diversity Review The Evolutionary History, Diversity, and Ecology of Willows (Salix L.) in the European Alps Natascha D. Wagner 1 , Li He 2 and Elvira Hörandl 1,* 1 Department of Systematics, Biodiversity and Evolution of Plants (with Herbarium), University of Goettingen, Untere Karspüle 2, 37073 Göttingen, Germany; [email protected] 2 College of Forestry, Fujian Agriculture and Forestry University, Fuzhou 350002, China; [email protected] * Correspondence: [email protected] Abstract: The genus Salix (willows), with 33 species, represents the most diverse genus of woody plants in the European Alps. Many species dominate subalpine and alpine types of vegetation. Despite a long history of research on willows, the evolutionary and ecological factors for this species richness are poorly known. Here we will review recent progress in research on phylogenetic relation- ships, evolution, ecology, and speciation in alpine willows. Phylogenomic reconstructions suggest multiple colonization of the Alps, probably from the late Miocene onward, and reject hypotheses of a single radiation. Relatives occur in the Arctic and in temperate Eurasia. Most species are widespread in the European mountain systems or in the European lowlands. Within the Alps, species differ eco- logically according to different elevational zones and habitat preferences. Homoploid hybridization is a frequent process in willows and happens mostly after climatic fluctuations and secondary contact. Breakdown of the ecological crossing barriers of species is followed by introgressive hybridization. Polyploidy is an important speciation mechanism, as 40% of species are polyploid, including the four endemic species of the Alps. Phylogenomic data suggest an allopolyploid origin for all taxa analyzed Citation: Wagner, N.D.; He, L.; so far. -
Isoprenoid Emission in Hygrophyte and Xerophyte European Woody Flora: Ecological and Evolutionary Implications
Global Ecology and Biogeography, (Global Ecol. Biogeogr.) (2014) 23, 334–345 bs_bs_banner RESEARCH Isoprenoid emission in hygrophyte and PAPER xerophyte European woody flora: ecological and evolutionary implications Francesco Loreto1*, Francesca Bagnoli2, Carlo Calfapietra3,4, Donata Cafasso5, Manuela De Lillis1, Goffredo Filibeck6, Silvia Fineschi2, Gabriele Guidolotti7, Gábor Sramkó8, Jácint Tökölyi9 and Carlo Ricotta10 1Dipartimento di Scienze Bio-Agroalimentari, ABSTRACT Consiglio Nazionale delle Ricerche, Piazzale Aim The relationship between isoprenoid emission and hygrophily was investi- Aldo Moro 7, 00185 Roma, Italy, 2Istituto per la Protezione delle Piante, Consiglio Nazionale gated in woody plants of the Italian flora, which is representative of European delle Ricerche, Via Madonna del Piano 10, diversity. 50019 Sesto Fiorentino (Firenze), Italy, Methods Volatile isoprenoids (isoprene and monoterpenes) were measured, or 3 Istituto di Biologia Agroambientale e data collected from the literature, for 154 species native or endemic to the Medi- Forestale, Consiglio Nazionale delle Ricerche, terranean. The Ellenberg indicator value for moisture (EIVM) was used to describe Via Marconi 3, Porano (Terni), Italy, plant hygrophily. Phylogenetic analysis was carried out at a broader taxonomic scale 4Global Change Research Centre – CzechGlobe, on 128 species, and then refined on strong isoprene emitters (Salix and Populus Belidla 4a, 603 00 Brno, Czech Republic, species) based on isoprene synthase gene sequences (IspS). 5Dipartimento di Biologia, Università degli Studi di Napoli ‘Federico II, Complesso Results Isoprene emitters were significantly more common and isoprene emis- Universitario di Monte S. Angelo, Via Cinthia, sion was higher in hygrophilous EIVM classes, whereas monoterpene emitters were 80126 Napoli, Italy, 6Dipartimento di Scienze more widespread and monoterpene emission was higher in xeric classes. -
Vliv Obranných Mechanismů Vrb Na Strukturu Společenstev Herbivorního Hmyzu Martin Volf
Jiho česká univerzita v Českých Bud ějovicích Přírodov ědecká fakulta Vliv obranných mechanism ů vrb na strukturu spole čenstev herbivorního hmyzu Diplomová práce Martin Volf Školitel: Mgr. Jan Hr ček České Bud ějovice 2012 MAGISTERSKÁ DIPLOMOVÁ PRÁCE Volf, M. (2012) Vliv obranných mechanism ů vrb na strukturu spole čenstev herbivorního hmyzu . (The impact of deffensive host-plant traits on community structure of herbivorous insects on willows, Mgr. Thesis, in Czech) - 66 pp. Faculty of Science, University of South Bohemia, České Bud ějovice, Czech Republic. ANOTACE This study examines the role of deffensive host-plant traits in structuring the community of leaf-chewing insects living on willows. Host-plant phylogeny was reconstructed and leaf morphology and content of three different groups of secondary metabolites were measured. Relationships between defensive leaf traits were examined and their influence on insect community structure was analyzed. Prohlašuji, že svoji diplomovou práci jsem vypracoval samostatn ě pouze s použitím pramen ů a literatury uvedených v seznamu citované literatury. Prohlašuji, že v souladu s § 47b zákona č. 111/1998 Sb. v platném zn ění souhlasím se zve řejn ěním své diplomové práce, a to v nezkrácené podob ě elektronickou cestou ve ve řejn ě p řístupné části databáze STAG provozované Jiho českou univerzitou v Českých Bud ějovicích na jejích internetových stránkách, a to se zachováním mého autorského práva k odevzdanému textu této kvalifika ční práce. Souhlasím dále s tím, aby toutéž elektronickou cestou byly v souladu s uvedeným ustanovením zákona č. 111/1998 Sb. zve řejn ěny posudky školitele a oponent ů práce i záznam o pr ůběhu a výsledku obhajoby kvalifika ční práce. -
Tri-Trophic Interactions of a Predator- Parasite-Host Assemblage in New Zealand
Tri-trophic interactions of a predator- parasite-host assemblage in New Zealand BY KIRSTY JANE YULE A thesis submitted to Victoria University of Wellington in fulfilment of the requirements for the degree of Doctor of Philosophy Victoria University of Wellington (2016) 1 2 This thesis was conducted under the supervision of Associate Professor Kevin Burns (Primary Supervisor) Victoria University of Wellington, New Zealand 3 4 Abstract Parasites are ubiquitous and the antagonistic relationships between parasites and their hosts shape populations and ecosystems. However, our understanding of complex parasitic interactions is lacking. New Zealand’s largest endemic moth, Aenetus virescens (Lepidoptera: Hepialidae) is a long-lived arboreal parasite. Larvae grow to 100mm, living ~6 years in solitary tunnels in host trees. Larvae cover their tunnel entrance with silk and frass webbing, behind which they feed on host tree phloem. Webbing looks much like the tree background, potentially concealing larvae from predatory parrots who consume larvae by tearing wood from trees. Yet, the ecological and evolutionary relationships between the host tree, the parasitic larvae, and the avian predator remain unresolved. In this thesis, I use a system-based approach to investigate complex parasite-host interactions using A. virescens (hereafter “larvae”) as a model system. First, I investigate the mechanisms driving intraspecific parasite aggregation (Chapter 2). Overall, many hosts had few parasites and few hosts had many, with larvae consistently more abundant in larger hosts. I found no evidence for density- dependent competition as infrapopulation size had no effect on long-term larval growth. Host specificity, the number of species utilised from the larger pool available, reflects parasite niche breadth, risk of extinction and ability to colonise new locations. -
A Guide to Frequent and Typical Plant Communities of the European Alps
- Alpine Ecology and Environments A guide to frequent and typical plant communities of the European Alps Guide to the virtual excursion in lesson B1 (Alpine plant biodiversity) Peter M. Kammer and Adrian Möhl (illustrations) – Alpine Ecology and Environments B1 – Alpine plant biodiversity Preface This guide provides an overview over the most frequent, widely distributed, and characteristic plant communities of the European Alps; each of them occurring under different growth conditions. It serves as the basic document for the virtual excursion offered in lesson B1 (Alpine plant biodiversity) of the ALPECOLe course. Naturally, the guide can also be helpful for a real excursion in the field! By following the road map, that begins on page 3, you can determine the plant community you are looking at. Communities you have to know for the final test are indicated with bold frames in the road maps. On the portrait sheets you will find a short description of each plant community. Here, the names of communities you should know are underlined. The portrait sheets are structured as follows: • After the English name of the community the corresponding phytosociological units are in- dicated, i.e. the association (Ass.) and/or the alliance (All.). The names of the units follow El- lenberg (1996) and Grabherr & Mucina (1993). • The paragraph “site characteristics” provides information on the altitudinal occurrence of the community, its topographical situation, the types of substrata, specific climate conditions, the duration of snow-cover, as well as on the nature of the soil. Where appropriate, specifications on the agricultural management form are given. • In the section “stand characteristics” the horizontal and vertical structure of the community is described. -
New Reports of Melampsora Rust (Pucciniomycetes) on the Salix Retusa Complex in Balkan Countries
(2020) 44 (1): 89-93 DOI: https://doi.org/10.2298/BOTSERB2001089S journal homepage: botanicaserbica.bio.bg.ac.rs Original Scientific Report New reports of Melampsora rust (Pucciniomycetes) on the Salix retusa complex in Balkan countries Miloš Stupar✳, Milica Ljaljević Grbić, Jelena Vukojević and Dmitar Lakušić University of Belgrade, Faculty of Biology, Institute of Botany and Botanical Garden “Jevremovac”, Takovska 43, 11000 Belgrade, Serbia ✳ correspondence: [email protected] Keywords: ABSTRACT: plant pathogen, distribution, Melampsora epitea, known to cause rust on the complex of Salix retusa prostrate Melampsora epitea, basidiomycete, willows distributed in the subalpine and alpine belt of the mountains of Central snow willows Europe, is here documented for the first time in Montenegro and North Macedonia growing at six localities. It is not new for Serbia, but the records come from a newly reported host, namely Salix serpyllifolia. The pathogen’s distribution presumably is UDC: 528.28:582.681.81(234.42) wider than initially believed, and further surveys need to be conducted. Received: 09 January 2020 Revision accepted: 04 February 2020 During field investigation of the complex of Salix retusa were collected, placed in bags and transported to a labo- (family Salicaceae) on the Balkan Peninsula, six popula- ratory in the Department of Algology, Mycology and Li- tions with many individuals infected with rust fungus chenology of Faculty of Biology, University of Belgrade for were documented (Fig. 1). proper screening of symptoms, documented and used for The complex of Salix retusa includes S. retusa L. (s.str), further analyses by light and scanning microscopy. Symp- S. -
How Does Genome Size Affect the Evolution of Pollen Tube Growth Rate, a Haploid
Manuscript bioRxiv preprint doi: https://doi.org/10.1101/462663; this version postedClick April here18, 2019. to The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv aaccess/download;Manuscript;PTGR.genome.evolution.15April20 license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Effects of genome size on pollen performance 2 3 4 5 How does genome size affect the evolution of pollen tube growth rate, a haploid 6 performance trait? 7 8 9 10 11 John B. Reese1,2 and Joseph H. Williams2 12 Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 13 37996, U.S.A. 14 15 16 17 1Author for correspondence: 18 John B. Reese 19 Tel: 865 974 9371 20 Email: [email protected] 21 1 bioRxiv preprint doi: https://doi.org/10.1101/462663; this version posted April 18, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 22 ABSTRACT 23 Premise of the Study – Male gametophytes of most seed plants deliver sperm to eggs via a 24 pollen tube. Pollen tube growth rates (PTGRs) of angiosperms are exceptionally rapid, a pattern 25 attributed to more effective haploid selection under stronger pollen competition. Paradoxically, 26 whole genome duplication (WGD) has been common in angiosperms but rare in gymnosperms. -
Floral Scent in Salix L. and the Role of Olfactory and Visual Cues for Pollinator Attraction of Salix Caprea L
Floral Scent in Salix L. and the Role of Olfactory and Visual Cues for Pollinator Attraction of Salix caprea L. Dissertation zur Erlangung des Doktorgrades Vorgelegt der Fakultät für Biologie, Chemie und Geowissenschaften der Universität Bayreuth von Ulrike Füssel Bayreuth, im Oktober 2007 II Die Arbeit wurde von August 2004 bis Oktober 2007 am Ökologisch-Botanischen Garten der Universität Bayreuth in der Arbeitsgruppe von Herrn PD Dr. Gregor Aas angefertigt. Gefördert wurde die vorliegende Arbeit durch ein Stipendium der Deutschen Forschungsgemeinschaft (Graduiertenkolleg 678 – Ökologische Bedeutung von Wirk- und Signalstoffen bei Insekten – von der Struktur zur Funktion). Vollständiger Abdruck der von der Fakultät für Biologie, Chemie und Geowissenschaften der Universität genehmigten Disseration zur Erlangung des Grades eines Doktors der Naturwissenschaften (Dr. rer. nat.). Tag der Einreichung: 24. Oktober 2007 Tag des Kolloquiums: 09. Januar 2008 Prüfungsausschuss PD Dr. G. Aas (Erstgutachter) Prof. Dr. K. H. Hoffmann (Zweitgutachter) Prof. Dr. K. Dettner (Vorsitzender) Prof. Dr. S. Liede-Schumann Prof. Dr. R. Schobert III This dissertation is submitted as a “Cumulative Thesis“ that includes four (4) publications: two (2) published articles, one (1) submitted article, and one (1) article in preparation for submission. The publications are listed in detail below. Published: • Dötterl S., Füssel U., Jürgens A., and Aas G. (2005): 1,4-Dimethoxybenzene, a floral scent compound in willows that attracts an oligolectic bee. Journal of Chemical Ecology 31:2993-2998 (Part B, Chapter 3). • Füssel U., Dötterl S., Jürgens A., and Aas G. (2007): Inter- and intraspecific variation in floral scent in the genus Salix and its implication for pollination. Journal of Chemical Ecology 33:749-765 (Part B, Chapter 1). -
Illustration Sources
APPENDIX ONE ILLUSTRATION SOURCES REF. CODE ABR Abrams, L. 1923–1960. Illustrated flora of the Pacific states. Stanford University Press, Stanford, CA. ADD Addisonia. 1916–1964. New York Botanical Garden, New York. Reprinted with permission from Addisonia, vol. 18, plate 579, Copyright © 1933, The New York Botanical Garden. ANDAnderson, E. and Woodson, R.E. 1935. The species of Tradescantia indigenous to the United States. Arnold Arboretum of Harvard University, Cambridge, MA. Reprinted with permission of the Arnold Arboretum of Harvard University. ANN Hollingworth A. 2005. Original illustrations. Published herein by the Botanical Research Institute of Texas, Fort Worth. Artist: Anne Hollingworth. ANO Anonymous. 1821. Medical botany. E. Cox and Sons, London. ARM Annual Rep. Missouri Bot. Gard. 1889–1912. Missouri Botanical Garden, St. Louis. BA1 Bailey, L.H. 1914–1917. The standard cyclopedia of horticulture. The Macmillan Company, New York. BA2 Bailey, L.H. and Bailey, E.Z. 1976. Hortus third: A concise dictionary of plants cultivated in the United States and Canada. Revised and expanded by the staff of the Liberty Hyde Bailey Hortorium. Cornell University. Macmillan Publishing Company, New York. Reprinted with permission from William Crepet and the L.H. Bailey Hortorium. Cornell University. BA3 Bailey, L.H. 1900–1902. Cyclopedia of American horticulture. Macmillan Publishing Company, New York. BB2 Britton, N.L. and Brown, A. 1913. An illustrated flora of the northern United States, Canada and the British posses- sions. Charles Scribner’s Sons, New York. BEA Beal, E.O. and Thieret, J.W. 1986. Aquatic and wetland plants of Kentucky. Kentucky Nature Preserves Commission, Frankfort. Reprinted with permission of Kentucky State Nature Preserves Commission. -
Vrba Šedá (Salix Elaeagnos ) V Moravskoslezských Beskydech: Zhodnocení Sou Časného Stavu Druhu
Univerzita Palackého Přírodov ědecké fakulta Katedra botaniky Vrba šedá (Salix elaeagnos ) v Moravskoslezských Beskydech: zhodnocení sou časného stavu druhu. Recent chorological and ecological characteristics od Rosemary willow ( Salix elaeagnos ) in the Moravsko-slezské Beskydy Mts. Bakalá řská práce Lucie Kle čková B1501 Biologie, Systematická biologie a ekologie, Prezen ční studium Vedoucí práce: RNDr. Radim J. Vašut, Ph.D. Srpen 2010 Prohlášení: Prohlašuji, že jsem tuto bakalá řskou práci vypracovala samostatn ě pod vedením vedoucího práce. Uvedla jsem všechny literární prameny, ze kterých jsem čerpala. V Olomouci dne 12 . 8. 2010 Podpis: 2 Pod ěkování: Cht ěla bych pod ěkovat vedoucímu mé práce RNDr. Radimu J. Vašutovi, Ph.D. za odbornou pomoc, cenné rady a hlavn ě za trp ělivost s mými dotazy. Zárove ň bych cht ěla pod ěkovat paní Marii Popelá řové (Správa CHKO Beskydy) a panu Zde ňkovi Ku čerovi (AOPK) za ochotnou spolupráci. 3 Biblografická identifikace Jméno a p říjmení autora: Lucie Kle čková Název práce: Vrba šedá ( Salix elaeagnos ) v Moravskoslezských Beskydech: zhodnocení sou časného stavu druhu. Typ práce: bakalá řská práce Pracovišt ě: Katedra botaniky P řf UP Vedoucí práce: RNDr. Radim J. Vašut, Ph.D. Rok obhajoby: 2010 Abstrakt: Vrba šedá ( Salix elaeagnos ) pat ří v České republice k siln ě ohroženým druh ům. Svým výskytem se soust řeďuje pouze do oblasti Beskyd a Podbeskydské pahorkatiny. Je vázána na vzácný biotop št ěrkových náplav ů. Tato práce se zabývá revizí historických údaj ů rozší ření vrby šedé a zhodnocením sou časného stavu jejího rozší ření v Moravskoslezských Beskydech. V terénním výzkumu jsem se zam ěř ila na situaci na řece Ostravici, kde jsem provedla detailní zmapování výskytu. -
430002282 Bassin Du Drugeon
INVENTAIRE DES ZONES NATURELLES D'INTÉRÊTS ÉCOLOGIQUE, TYPE DE PROCÉDURE 1 FAUNISTIQUE ET FLORISTIQUE Ministère chargé de l'Ecologie / Service du Patrimoine Naturel - MNHN Modernisation de Zone Zone mise à jour le 03/05/2013 -- Document généré le 24/05/2013 RÉGION ADMINISTRATIVE IDENTIFIANT RÉGIONAL et TYPE DE ZONE IDENTIFIANT NATIONAL Franche-Comté Code régional : 01060000 / Zone de type 2 430002282 3-NOM DE LA ZONE 4-ANNÉE DE DESCRIPTION 01/01/1984 BASSIN DU DRUGEON ANNÉE DE MISE A JOUR 01/08/2011 5-LOCALISATION a) Commune(s) : - Mignovillard (39331) - Bief-du-Fourg (39053) - Communailles-en-Montagne (39161) - Bannans (25041) - Bonnevaux (25075) - Bouverans (25085) - Pontarlier (25462) - Bulle (25100) - Chaffois (25110) - Rivière-Drugeon (25493) - Sainte-Colombe (25515) - Dompierre-les-Tilleuls (25202) - Vaux-et-Chantegrue (25592) - Frasne (25259) - Granges-Narboz (25293) - Houtaud (25309) - Malpas (25362) b) Altitude(s): 835 m à 850 m. c) Superficie: 6632 hectares. e) Relation parent/enfant - Znieff Type I enfant : - BOIS DU FORBONNET ET TOURBIERE VIVANTE DE FRASNE (N°NAT : 430009449 - N°REG : 01060001) - ENSEMBLE DES MARAIS ENTRE BOUVERANS, DOMPIERRE-LES-TILLEULS ET FRASNE (N°NAT : 430010456 - N°REG : 01060005) - ETANG DE LA RIVIERE-DRUGEON ET ZONES HUMIDES (N°NAT : 430020021 - N°REG : 01060014) - GRAND ETANG DE FRASNE (N°NAT : 430010454 - N°REG : 01060003) - HAUTE VALLEE DU DRUGEON ET PRÉ VAILLON (N°NAT : 430020020 - N°REG : 01060013) - LA GRANDE SEIGNE ET LES VESPRIES (N°NAT : 430002265 - N°REG : 01060008) - L'ENTONNOIR, ZONES HUMIDES