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This Is an Open Access Document Downloaded from ORCA, Cardiff University's Institutional Repository
This is an Open Access document downloaded from ORCA, Cardiff University's institutional repository: http://orca.cf.ac.uk/117055/ This is the author’s version of a work that was submitted to / accepted for publication. Citation for final published version: Jorge, F., White, R.S.A. and Paterson, Rachel A. 2018. Hiding in the swamp: new capillariid nematode parasitizing New Zealand brown mudfish. Journal of Helminthology 92 (3) , pp. 379-386. 10.1017/S0022149X17000530 file Publishers page: http://dx.doi.org/10.1017/S0022149X17000530 <http://dx.doi.org/10.1017/S0022149X17000530> Please note: Changes made as a result of publishing processes such as copy-editing, formatting and page numbers may not be reflected in this version. For the definitive version of this publication, please refer to the published source. You are advised to consult the publisher’s version if you wish to cite this paper. This version is being made available in accordance with publisher policies. See http://orca.cf.ac.uk/policies.html for usage policies. Copyright and moral rights for publications made available in ORCA are retained by the copyright holders. Title: Hiding in the swamp: new capillariid nematode parasitizing New Zealand brown mudfish Authors: Fátima Jorge1, Richard S. A. White2 and Rachel A. Paterson1,3 Addresses: 1Department of Zoology, University of Otago, PO Box 56, Dunedin 9054, New Zealand; 2School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand; 3School of Biosciences, University of Cardiff, Cardiff, CF10 3AX, United Kingdom Running headline: Capillariid nematode parasitizing New Zealand mudfish Corresponding author: Fátima Jorge Department of Zoology, University of Otago, 340 Great King Street, PO Box 56, Dunedin 9054, New Zealand e-mail: [email protected] 1 Abstract The extent of New Zealand’s freshwater fish-parasite diversity has yet to be fully revealed, with host-parasite relationships still to be described from nearly half the known fish community. -
From Skin of Red Snapper, Lutjanus Campechanus (Perciformes: Lutjanidae), on the Texas–Louisiana Shelf, Northern Gulf of Mexico
J. Parasitol., 99(2), 2013, pp. 318–326 Ó American Society of Parasitologists 2013 A NEW SPECIES OF TRICHOSOMOIDIDAE (NEMATODA) FROM SKIN OF RED SNAPPER, LUTJANUS CAMPECHANUS (PERCIFORMES: LUTJANIDAE), ON THE TEXAS–LOUISIANA SHELF, NORTHERN GULF OF MEXICO Carlos F. Ruiz, Candis L. Ray, Melissa Cook*, Mark A. Grace*, and Stephen A. Bullard Aquatic Parasitology Laboratory, Department of Fisheries and Allied Aquacultures, College of Agriculture, Auburn University, 203 Swingle Hall, Auburn, Alabama 36849. Correspondence should be sent to: [email protected] ABSTRACT: Eggs and larvae of Huffmanela oleumimica n. sp. infect red snapper, Lutjanus campechanus (Poey, 1860), were collected from the Texas–Louisiana Shelf (28816036.5800 N, 93803051.0800 W) and are herein described using light and scanning electron microscopy. Eggs in skin comprised fields (1–5 3 1–12 mm; 250 eggs/mm2) of variously oriented eggs deposited in dense patches or in scribble-like tracks. Eggs had clear (larvae indistinct, principally vitelline material), amber (developing larvae present) or brown (fully developed larvae present; little, or no, vitelline material) shells and measured 46–54 lm(x¼50; SD 6 1.6; n¼213) long, 23–33 (27 6 1.4; 213) wide, 2–3 (3 6 0.5; 213) in eggshell thickness, 18–25 (21 6 1.1; 213) in vitelline mass width, and 36–42 (39 6 1.1; 213) in vitelline mass length with protruding polar plugs 5–9 (7 6 0.6; 213) long and 5–8 (6 6 0.5; 213) wide. Fully developed larvae were 160–201 (176 6 7.9) long and 7–8 (7 6 0.5) wide, had transverse cuticular ridges, and were emerging from some eggs within and beneath epidermis. -
Fishery Resources
SSESSMENT OF AASSESSMENT OF ONG ONG S HHONG KKONG’’S NSHORE IINSHORE FFIISSHHEERRYY RREESSOOUURRCCEESS bbyy TToonnyy JJ.. PPiittcchheerr RReegg WWaattssoonn AAnntthhoonnyy CCoouurrttnneeyy && DDaanniieell PPaauullyy Fisheries Centre University of British Columbia July 1997 ASSESSMENT OF HONG KONG’S INSHORE FISHERY RESOURCES by Tony J. Pitcher Reg Watson Anthony Courtney & Daniel Pauly FISHERIES CENTRE, UNIVERSITY OF BRITISH COLUMBIA JANUARY 1998 Assessment of Hong Kong Inshore Fishery Resources, Page 2 TABLE OF CONTENTS Executive Summary .......................................................................................................................3 Introduction ...................................................................................................................................4 Methods..........................................................................................................................................5 Biomass estimation methods ...........................................................................................5 Catch estimation methods................................................................................................7 Single species assessment methods .................................................................................8 Length weight relationship .................................................................................8 Growth rates ........................................................................................................9 Mortality rates -
Huffmanela Huffmani: Life Cycle, Natural History, And
HUFFMANELA HUFFMANI: LIFE CYCLE, NATURAL HISTORY, AND BIOGEOGRAPHY by McLean Worsham, B.S. A thesis submitted to the Graduate Council of Texas State University in partial fulfillment of the requirements for the degree of Master of Science with a Major in Biology May 2015 Committee Members: David Huffman, Chair Chris Nice Randy Gibson COPYRIGHT by McLean Worsham 2015 FAIR USE AND AUTHOR’S PERMISSION STATEMENT Fair Use This work is protected by the Copyright Laws of the United States (Public Law 94-553, section 107). Consistent with fair use as defined in the Copyright Laws, brief quotations from this material are allowed with proper acknowledgment. Use of this material for financial gain without the author’s express written permission is not allowed. Duplication Permission As the copyright holder of this work I, McLean Worsham, authorize duplication of this work, in whole or in part, for educational or scholarly purposes only. ACKNOWLEDGEMENTS I would like to acknowledge Harlan Nicols, Stephen Harding, Eric Julius, Helen Wukasch, and Sungyoung Kim for invaluable help in the field and/or the lab. I would like to acknowledge Dr. David Huffman for incredible and dedicated mentorship. I would like to thank Randy Gibson for his invaluable help in trying to understand the taxonomy and ecology of aquatic invertebrates. I would like to acknowledge Drs. Chris Nice, Weston Nowlin, and Ben Schwartz for invaluable insight and mentorship throughout my research and the graduate student process. I would like to thank my good friend Alex Zalmat for always offering everything he has when a friend is in a time of need. -
New Capillariid Nematode Parasitizing New Zealand Brown Mudfish Authors
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Online Research @ Cardiff Title: Hiding in the swamp: new capillariid nematode parasitizing New Zealand brown mudfish Authors: Fátima Jorge1, Richard S. A. White2 and Rachel A. Paterson1,3 Addresses: 1Department of Zoology, University of Otago, PO Box 56, Dunedin 9054, New Zealand; 2School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand; 3School of Biosciences, University of Cardiff, Cardiff, CF10 3AX, United Kingdom Running headline: Capillariid nematode parasitizing New Zealand mudfish Corresponding author: Fátima Jorge Department of Zoology, University of Otago, 340 Great King Street, PO Box 56, Dunedin 9054, New Zealand e-mail: [email protected] 1 Abstract The extent of New Zealand’s freshwater fish-parasite diversity has yet to be fully revealed, with host-parasite relationships still to be described from nearly half the known fish community. Whilst advancements in the number of fish species examined and parasite taxa described are being made; some parasite groups, such as nematodes, remain poorly understood. In the present study we combined morphological and molecular analyses to characterize a capillariid nematode found infecting the swim bladder of the brown mudfish Neochanna apoda, an endemic New Zealand fish from peat-swamp-forests. Morphologically, the studied nematodes are distinct from other Capillariinae taxa by the features of the male posterior end, namely the shape of the bursa lobes, and shape of spicule distal end. Male specimens were classified in three different types according to differences in shape of the bursa lobes at the posterior end, but only one was successfully molecularly characterized. -
Huffmanela Paronai Sp. N. (Nematoda: Trichosomoididae), a New Parasite from the Skin of Swordfish Xiphias Gladius in the Ligurian Sea (Western Mediterranean)
FOLIA PARASITOLOGICA 47: 309-313, 2000 Huffmanela paronai sp. n. (Nematoda: Trichosomoididae), a new parasite from the skin of swordfish Xiphias gladius in the Ligurian Sea (Western Mediterranean) František Moravec1 and Fulvio Garibaldi2 1Institute of Parasitology, Academy of Sciences of the Czech Republic, Branišovská 31, 370 05 České Budějovice, Czech Republic; 2Dipartimento per lo Studio del Territorio e delle sue Risorse (DIP.TE.RIS.), Laboratori di Biologia Marina ed Ecologia Animale, Università di Genova, Via Balbi 5, 16126 Genova, Italy Key words: parasitic nematode, Huffmanela, epidermis, fish, Xiphias, Ligurian Sea, Italy Abstract. A new species of trichosomoidid nematode, Huffmanela paronai sp. n., is established on the basis of its egg morphology and biological characters. The dark-shelled, embryonated eggs of this histozoic parasite occur in masses in the epidermis of the swordfish Xiphias gladius L. (Xiphiidae, Perciformes) from the Ligurian Sea in northern Italy. The eggs are concentrated in groups appearing as black spots in the skin of the fish host, being distributed mainly on the lower part of its body (lower jaw, gill covers, pectoral, anal and caudal fins, lower half of body). The parasite’s eggs are characterised mainly by their shape and markedly small size (48-51 × 21-24 µm), an aspinose surface, relatively small polar plugs, and thick egg wall (3 µm). This is the first Huffmanela species reported from fish in Europe. During studies on the fishery and biology of the routine paraffin technique, sectioned at 5 µm, and stained with swordfish, Xiphias gladius L., carried out by the junior Harris’ haematoxylin and eosin. All measurements are in µm, author (F. -
The Life Cycle of Huffmanela Huffmani Moravec, 1987 (Nematoda: Trichosomoididae), an Endemic Marine-Relict Parasite of Centrarchidae from a Central Texas Spring
© Institute of Parasitology, Biology Centre CAS Folia Parasitologica 2016, 63: 020 doi: 10.14411/fp.2016.020 http://folia.paru.cas.cz Research Article The life cycle of Huffmanela huffmani Moravec, 1987 (Nematoda: Trichosomoididae), an endemic marine-relict parasite of Centrarchidae from a Central Texas spring McLean L. D. Worsham1, David G. Huffman1, František Moravec2 and J. Randy Gibson3 1 Freeman Aquatic Biology, Texas State University, San Marcos, TX, USA; 2 Institute of Parasitology, Biology Centre of the Czech Academy of Sciences, České Budějovice, Czech Republic; 3 U.S. Fish and Wildlife Service, Aquatic Resources Center, San Marcos, TX, USA Abstract: The life cycle of the swim bladder nematode Huffmanela huffmani Moravec, 1987 (Trichinelloidea: Trichosomoididae), an endemic parasite of centrarchid fishes in the upper spring run of the San Marcos River in Hays County, Texas, USA, was experi- mentally completed. The amphipods Hyalella cf. azteca (Saussure), Hyalella sp. and Gammarus sp. were successfully infected with larvated eggs of Huffmanela huffmani. After ingestion of eggs of H. huffmani by experimental amphipods, the first-stage larvae hatch from their eggshells and penetrate through the digestive tract to the hemocoel of the amphipod. Within about 5 days in the hemocoel of the experimental amphipods at 22 °C, the larvae presumably attained the second larval stage and were infective for the experimen- tal centrarchid definitive hosts, Lepomis spp. The minimum incubation period before adult nematodes began laying eggs in the swim bladders of the definitive hosts was found to be about 7.5 months at 22 °C. This is the first experimentally completed life cycle within the Huffmanelinae. -
PHD Dissertaiton by Zhen Tao.Pdf (3.618Mb)
Vibrios associated with marine samples from the Northern Gulf of Mexico: implications for human health by Zhen Tao A dissertation submitted to the Graduate Faculty of Auburn University in partial fulfillment of the requirements for the Degree of Doctor of Philosophy Auburn, Alabama August 3, 2013 Keywords: recreational fishing, Vibrio vulnificus, public health Copyright 2013 by Zhen Tao Approved by Covadonga R. Arias, Chair, Full Professor of Fisheries and Allied Aquacultures Thomas A. McCaskey, Professor of Animal Science Calvin M. Johnson, Professor of Pathology Stephen A. Bullard, Assistant Professor of Fisheries and Allied Aquacultures Abstract In this dissertation, I investigated the distribution and prevalence of two human- pathogenic Vibrio species (V. vulnificus and V. parahaemolyticus) in non-shellfish samples including fish, bait shrimp, water, sand and crude oil material released by the Deepwater Horizon oil spill along the Northern Gulf of Mexico (GoM) coast. In my study, the Vibrio counts were enumerated in samples by using the most probable number procedure or by direct plate counting. In general, V. vulnificus isolates recovered from different samples were genotyped based on the polymorphism present in 16S rRNA or the vcg (virulence correlated gene) locus. Amplified fragment length polymorphism (AFLP) was used to resolve the genetic diversity within V. vulnificus population isolated from fish. PCR analysis was used to screen for virulence factor genes (trh and tdh) in V. parahaemolyticus isolates yielded from bait shrimp. A series of laboratory microcosm experiments and an allele-specific quantitative PCR (ASqPCR) technique were designed and utilized to reveal the relationship between two V. vulnificus 16S rRNA types and environmental factors (temperature and salinity). -
Chinese Red Swimming Crab (Portunus Haanii) Fishery Improvement Project (FIP) in Dongshan, China (August-December 2018)
Chinese Red Swimming Crab (Portunus haanii) Fishery Improvement Project (FIP) in Dongshan, China (August-December 2018) Prepared by Min Liu & Bai-an Lin Fish Biology Laboratory College of Ocean and Earth Sciences, Xiamen University March 2019 Contents 1. Introduction........................................................................................................ 5 2. Materials and Methods ...................................................................................... 6 2.1. Study site and survey frequency .................................................................... 6 2.2. Sample collection .......................................................................................... 7 2.3. Species identification................................................................................... 10 2.4. Sample measurement ................................................................................... 11 2.5. Interviews.................................................................................................... 13 2.6. Estimation of annual capture volume of Portunus haanii ............................. 15 3. Results .............................................................................................................. 15 3.1. Species diversity.......................................................................................... 15 3.1.1. Species composition .............................................................................. 15 3.1.2. ETP species ......................................................................................... -
Xiphias Gladius, Linnaeus, 1758) and Comprehensive Overview
SCRS/2020/058 Collect. Vol. Sci. Pap. ICCAT, 77(3): 343-374 (2020) ADDITIONS TO THE ITALIAN ANNOTATED BIBLIOGRAPHY ON SWORDFISH (XIPHIAS GLADIUS, LINNAEUS, 1758) AND COMPREHENSIVE OVERVIEW Antonio Di Natale1 SUMMARY After the very first attempt to list together the many papers published so far on swordfish (Xiphias gladius) by Italian scientists, concerning the biology of this species, the fisheries and many other scientific and cultural issues, it was necessary to prepare an addition to the annotated bibliography published in 2019. Therefore, the present paper provides 185 additional papers, all annotated with specific keywords, which brings the available papers on this species up to 715, all duly annotated. This paper also provides an overview of the papers published over the centuries and decades, the main authors and the score of the main topics and themes included in the papers. This updated bibliography was set together to serve the scientists and to help them in finding some rare references that might be useful for their work. RÉSUMÉ Après la première tentative d’établir une liste des nombreux articles publiés à ce jour sur l'espadon (Xiphias gladius) par des scientifiques italiens, concernant la biologie de cette espèce, la pêche et bien d'autres questions scientifiques et culturelles, un complément à la bibliographie annotée publiée en 2019 s’est avéré nécessaire. Par conséquent, le présent document fournit 185 articles supplémentaires, tous annotés avec des mots clés spécifiques, ce qui porte à 715 le nombre d'articles disponibles sur cette espèce, tous dûment annotés. Ce document fournit également un aperçu des articles publiés au cours des siècles et des décennies, les principaux auteurs et la note des principaux sujets et thèmes inclus dans ceux-ci. -
Egg Shell Ultrastructure of the Fish Nematode Huffmanela Huffmani (Trichosomoididae)
FOLIA PARASITOLOGICA 48: 231-234, 2001 Egg shell ultrastructure of the fish nematode Huffmanela huffmani (Trichosomoididae) Zdeňka Žďárská1, David G. Huffman2, František Moravec1 and Jana Nebesářová1 1Institute of Parasitology, Academy of Sciences of the Czech Republic, Branišovská 31, 370 05 České Budějovice, Czech Republic; 2Freeman Aquatic Station, Southwest Texas State University, San Marcos, Texas 78666-4616, USA Key words: Nematoda, Trichosomoididae, Huffmanela, egg shell, ultrastructure Abstract. The egg shell of Huffmanela huffmani Moravec, 1987 forms three main layers: an outer vitelline layer, a middle chitinous layer, and an inner lipid layer. The vitelline layer, forming the superficial projections of the egg shell, comprises two parts: an outer electron-dense, and an inner electron-lucid part. The chitinous layer is differentiated into three parts: an outer homogenous electron-dense part, a lamellated part, and an inner electron-dense net-like part. The lipid layer comprises an outer net-like electron-lucid part, and an inner homogenous electron-lucid part. The polar plugs are formed by electron-lucid material with fine electron-dense fibrils. At present, the trichinelloid genus Huffmanela eggs; neither young eggs nor adult nematodes were detected. Moravec, 1987 comprises eight species of histozoic Infected parts of the swimbladder were rinsed in saline, fixed parasites of fishes, of which seven are known only by in 3% glutaraldehyde in 0.1 M cacodylate buffer (pH 7.2) at their characteristic eggs (Moravec 2001). The adult 4°C for 2 h, postfixed in 1% osmium tetroxide at 4°C for 2 h, nematodes have been described only in the type species, dehydrated in an ethanol series and embedded in Durcupan via Huffmanela huffmani Moravec, 1987. -
Diversité Ichtyologique En Méditerranée
UNIVERSITE MONTPELLIER II UNIVERSITE DU 7 NOVEMBRE A CARTHAGE SCIENCES ET TECHNIQUES DU LANGUEDOC INSTITUT NATIONAL AGRONOMIQUE DE TUNISIE THESE EN COTUTELLE pour obtenir le grade de DOCTEUR DE L'UNIVERSITE & DOCTEUR DE L’INSTITUT NATIONAL MONTPELLIER II AGRONOMIQUE DE TUNISIE Discipline : Ecosystèmes Discipline : Sciences Halieutiques Ecole Doctorale : Ecole Doctorale : Systèmes Intégrés en Biologie, Agronomie, Sciences Agronomiques Géosciences, Hydrosciences et Environnement présentée et soutenue publiquement par Frida BEN RAIS LASRAM A Montpellier, le 5 janvier 2009 Titre Diversité ichtyologique en Méditerranée : patrons, modélisation et projections dans un contexte de réchauffement global JURY Dr. Benjamin PLANQUE, Institute of Marine Research (Norvège) Rapporteur Dr. Ridha M’RABET, INSTM (Tunisie) Rapporteur Dr. Philippe CURY, IRD (France) Examinateur Pr. David MOUILLOT, Université Montpellier II (France) Examinateur Pr. Thang DO CHI, Université Montpellier II (France) Directeur de thèse Pr. Mohamed Salah ROMDHANE, INAT (Tunisie) Co-Directeur de thèse JURY Benjamin PLANQUE Senior Scientist, Institute of Marine Research (Norvège) Ridha M’RABET Directeur de recherche, Institut National des Sciences et Technologies de la Mer (Tunisie) Philippe CURY Directeur de recherche, Institut de Recherche pour le Développement (France) David MOUILLOT Professeur, Université Montpellier II (France) Thang DO CHI Professeur, Université Montpellier II (France) Mohamed Salah ROMDHANE Professeur, Institut National Agronomique de Tunisie (Tunisie) Résumé La mer Méditerranée est un écosystème particulier de par son isolement, sa grande richesse spécifique, son fort taux d’endémisme et les invasions exotiques qui y surviennent. Malgré l’intérêt qui a été porté à la Méditerranée depuis l’antiquité, aucune étude des patrons de diversité ichtyologique n’a été menée à grande échelle et sur l’ensemble des espèces et n’a proposé de simulations de scénarii face au changement global.