Identification and Isolation of a Castellaniella Species Important During Biostimulation of an Acidic Nitrate
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, Aug. 2007, p. 4892–4904 Vol. 73, No. 15 0099-2240/07/$08.00ϩ0 doi:10.1128/AEM.00331-07 Copyright © 2007, American Society for Microbiology. All Rights Reserved. Identification and Isolation of a Castellaniella Species Important during Biostimulation of an Acidic Nitrate- and Uranium-Contaminated Aquiferᰔ Anne M. Spain,1 Aaron D. Peacock,2 Jonathan D. Istok,3 Mostafa S. Elshahed,1† Fares Z. Najar,4 Bruce A. Roe,4 David C. White,2 and Lee R. Krumholz1* Department of Botany and Microbiology, University of Oklahoma, Norman, Oklahoma1; Center for Biomarker Analysis, University of Tennessee, Knoxville, Tennessee2; Department of Civil Engineering, Oregon State University, Corvallis, Oregon3; and Advanced Center for Genome Technology, University of Oklahoma, Norman, Oklahoma4 Received 9 February 2007/Accepted 30 May 2007 Immobilization of uranium in groundwater can be achieved through microbial reduction of U(VI) to U(IV) upon electron donor addition. Microbial community structure was analyzed in ethanol-biostimulated and control sediments from a high-nitrate (>130 mM), low-pH, uranium-contaminated site in Oak Ridge, TN. Analysis of small subunit (SSU) rRNA gene clone libraries and polar lipid fatty acids from sediments revealed that biostimulation resulted in a general decrease in bacterial diversity. Specifically, biostimulation resulted in an increase in the proportion of Betaproteobacteria (10% of total clones in the control sediment versus 50 and 79% in biostimulated sediments) and a decrease in the proportion of Gammaproteobacteria and Acidobacteria. Clone libraries derived from dissimilatory nitrite reductase genes (nirK and nirS) were also dominated by clones related to Betaproteobacteria (98% and 85% of total nirK and nirS clones, respectively).
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