Comparison of Biogenic Volatile Organic Compound Emissions from Broad Leaved and Coniferous Trees in Turkey
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Molecular Regulation of Plant Monoterpene Biosynthesis in Relation to Fragrance
Molecular Regulation of Plant Monoterpene Biosynthesis In Relation To Fragrance Mazen K. El Tamer Promotor: Prof. Dr. A.G.J Voragen, hoogleraar in de Levensmiddelenchemie, Wageningen Universiteit Co-promotoren: Dr. ir. H.J Bouwmeester, senior onderzoeker, Business Unit Celcybernetica, Plant Research International Dr. ir. J.P Roozen, departement Agrotechnologie en Voedingswetenschappen, Wageningen Universiteit Promotiecommissie: Dr. M.C.R Franssen, Wageningen Universiteit Prof. Dr. J.H.A Kroeze, Wageningen Universiteit Prof. Dr. A.J van Tunen, Swammerdam Institute for Life Sciences, Universiteit van Amsterdam. Prof. Dr. R.G.F Visser, Wageningen Universiteit Mazen K. El Tamer Molecular Regulation Of Plant Monoterpene Biosynthesis In Relation To Fragrance Proefschrift ter verkrijging van de graad van doctor op gezag van de rector magnificus van Wageningen Universiteit, Prof. dr. ir. L. Speelman, in het openbaar te verdedigen op woensdag 27 november 2002 des namiddags te vier uur in de Aula Mazen K. El Tamer Molecular Regulation Of Plant Monoterpene Biosynthesis In Relation To Fragrance Proefschrift Wageningen Universiteit ISBN 90-5808-752-2 Cover and Invitation Design: Zeina K. El Tamer This thesis is dedicated to my Family & Friends Contents Abbreviations Chapter 1 General introduction and scope of the thesis 1 Chapter 2 Monoterpene biosynthesis in lemon (Citrus limon) cDNA isolation 21 and functional analysis of four monoterpene synthases Chapter 3 Domain swapping of Citrus limon monoterpene synthases: Impact 57 on enzymatic activity and -
Meet Lycopene Prostate Cancer Is One of the Leading Causes of Cancer Death Among Men in the United States
UCLA Nutrition Noteworthy Title Lycopene and Mr. Prostate: Best Friends Forever Permalink https://escholarship.org/uc/item/5ks510rw Journal Nutrition Noteworthy, 5(1) Author Simzar, Soheil Publication Date 2002 Peer reviewed eScholarship.org Powered by the California Digital Library University of California Meet Lycopene Prostate cancer is one of the leading causes of cancer death among men in the United States. Dietary factors are considered an important risk factor for the development of prostate cancer in addition to age, genetic predisposition, environmental factors, and other lifestyle factors such as smoking. Recent studies have indicated that there is a direct correlation between the occurrence of prostate cancer and the consumption of tomatoes and tomato-based products. Lycopene, one of over 600 carotenoids, is one of the main carotenoids found in human plasma and it is responsible for the red pigment found in tomatoes and other foods such as watermelons and red grapefruits. It has been shown to be a very potent antioxidant, with oxygen-quenching ability greater than any other carotenoid. Recent research has indicated that its antioxidant effects help lower the risk of heart disease, atherosclerosis, and different types of cancer-especially prostate cancer. Lycopene's Characteristics Lycopene is on of approximately 600 known carotenoids. Carotenoids are red, yellow, and orange pigments which are widely distributed in nature and are especially abundant in yellow- orange fruits and vegetables and dark green, leafy vegetables. They absorb light in the 400- 500nm region which gives them a red/yellow color. Only green plants and certain microorganisms such as fungi and algae can synthesize these pigments. -
And Their OH Reactivity in Various Agro-Ecosystems Sandy Bsaibes
Characterization of biogenic volatile organic compounds (BVOCs) and their OH reactivity in various agro-ecosystems Sandy Bsaibes To cite this version: Sandy Bsaibes. Characterization of biogenic volatile organic compounds (BVOCs) and their OH reactivity in various agro-ecosystems. Global Changes. Université Paris-Saclay, 2019. English. NNT : 2019SACLV093. tel-02614381 HAL Id: tel-02614381 https://tel.archives-ouvertes.fr/tel-02614381 Submitted on 20 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Characterization of biogenic volatile organic compounds and their OH reactivity in various : 2019SACLV093 agro-ecosystems NNT Thèse de doctorat de l’Université Paris-Saclay Préparée à l’Université de Versailles Saint-Quentin-en-Yvelines Ecole doctorale n°129 Sciences de l’Environnement d’île-de-France (SEIF) Spécialité de doctorat : chimie atmosphérique Thèse présentée et soutenue à Gif-sur-Yvette, le 12 Décembre 2019 par Sandy Bsaibes Composition du Jury : Didier Hauglustaine Directeur de Recherche, LSCE, CNRS Président Agnès Borbon Chargée de Recherche, LaMP, CNRS Rapporteur Jonathan Williams Senior Scientist, MPIC Rapporteur Corinne Jambert Maître de conférences, LA Examinateur Benjamin Loubet Directeur de Recherche, Ecosys, INRA Examinateur Valérie Gros Directeur de Recherche, LSCE, CNRS Directeur de thèse Contents Acknowledgements .............................................................................................................................. -
Hinokitiol Production in Suspension Cells of Thujopsis Dolabrata Var
55 Original Papers Plant Tissue Culture Letters, 12(1), 55-61(1995) Hinokitiol Production in Suspension Cells of Thujopsis dolabrata var. hondai Makino Ryo FUJII, Kazuo OZAKI, Migifumi INO and Hitoshi WATANABE Integrated Technology Laboratories, Takeda Chemical Industries, Ltd. 11, Ichijoji-takenouchi-cho, Sakyo-ku, Kyoto 606 Japan (Received May 19, 1994) (Accepted October 8, 1994) Suspension cells of Thujopsis dolabrata var. hondai Makino were used as the material for studying the culture conditions by a two-step culture method (cell growth step and secondary metabolite production step) for the production of hinokitiol (Q-thujaplicin). Murashige and Skoog's (MS) medium containing N03-N and NH4-N in the ratio 3-5:1 (total nitrogen 30-75 mM) with 1.0mg/l NAA and 0.2mg/l TDZ was most desirable for cell growth (MS-O medium). The growth showed 14-fold increase after 30 days of culture in this medium. A higher ratio of NH4-N to total nitrogen resulted in hinokitiol accumulation in the cells. When the cells were transferred to the modified MS-O medium with the ratio of N03-N:NH4-N changed to 1:2 (MS-PC medium), an increase of hinokitiol level was observed. Also feeding acetates to the medium enhanced hinokitiol accumula- tion considerably. The highest hinokitiol content of 422tg/g FW was obtained when the cells were cultured in MS-O medium supplemented with 4.3mM acetic acid. Introduction An irregular monoterpene hinokitiol (B-thujaplicin) is widely present in the heartwood of the families Cupressaceae1). Hinokitiol has antimicrobial properties, and recently it has been indicated that hinokitiol suppresses ethylene synthesis and respiration of some fruits and vegetables. -
33 34 35 Lipid Synthesis Laptop
BI/CH 422/622 Liver cytosol ANABOLISM OUTLINE: Photosynthesis Carbohydrate Biosynthesis in Animals Biosynthesis of Fatty Acids and Lipids Fatty Acids Triacylglycerides contrasts Membrane lipids location & transport Glycerophospholipids Synthesis Sphingolipids acetyl-CoA carboxylase Isoprene lipids: fatty acid synthase Ketone Bodies ACP priming 4 steps Cholesterol Control of fatty acid metabolism isoprene synth. ACC Joining Reciprocal control of b-ox Cholesterol Synth. Diversification of fatty acids Fates Eicosanoids Cholesterol esters Bile acids Prostaglandins,Thromboxanes, Steroid Hormones and Leukotrienes Metabolism & transport Control ANABOLISM II: Biosynthesis of Fatty Acids & Lipids Lipid Fat Biosynthesis Catabolism Fatty Acid Fatty Acid Synthesis Degradation Ketone body Utilization Isoprene Biosynthesis 1 Cholesterol and Steroid Biosynthesis mevalonate kinase Mevalonate to Activated Isoprenes • Two phosphates are transferred stepwise from ATP to mevalonate. • A third phosphate from ATP is added at the hydroxyl, followed by decarboxylation and elimination catalyzed by pyrophospho- mevalonate decarboxylase creates a pyrophosphorylated 5-C product: D3-isopentyl pyrophosphate (IPP) (isoprene). • Isomerization to a second isoprene dimethylallylpyrophosphate (DMAPP) gives two activated isoprene IPP compounds that act as precursors for D3-isopentyl pyrophosphate Isopentyl-D-pyrophosphate all of the other lipids in this class isomerase DMAPP Cholesterol and Steroid Biosynthesis mevalonate kinase Mevalonate to Activated Isoprenes • Two phosphates -
Enhanced Lycopene Production in Escherichia Coli by Expression of Two MEP Pathway Enzymes from Vibrio Sp
catalysts Article Enhanced Lycopene Production in Escherichia coli by Expression of Two MEP Pathway Enzymes from Vibrio sp. Dhg 1, 1, 1 1, Min Jae Kim y, Myung Hyun Noh y , Sunghwa Woo , Hyun Gyu Lim * and Gyoo Yeol Jung 1,2,* 1 Department of Chemical Engineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk 37673, Korea; [email protected] (M.J.K.); [email protected] (M.H.N.); [email protected] (S.W.) 2 School of Interdisciplinary Bioscience and Bioengineering, Pohang University of Science and Technology, 77 Cheongam-Ro, Nam-Gu, Pohang, Gyeongbuk 37673, Korea * Correspondence: [email protected] (H.G.L.); [email protected] (G.Y.J.); Tel.: +82-54-279-2391 (G.Y.J.) These authors contributed equally to this work. y Received: 28 October 2019; Accepted: 26 November 2019; Published: 29 November 2019 Abstract: Microbial production is a promising method that can overcome major limitations in conventional methods of lycopene production, such as low yields and variations in product quality. Significant efforts have been made to improve lycopene production by engineering either the 2-C-methyl-d-erythritol 4-phosphate (MEP) pathway or mevalonate (MVA) pathway in microorganisms. To further improve lycopene production, it is critical to utilize metabolic enzymes with high specific activities. Two enzymes, 1-deoxy-d-xylulose-5-phosphate synthase (Dxs) and farnesyl diphosphate synthase (IspA), are required in lycopene production using MEP pathway. Here, we evaluated the activities of Dxs and IspA of Vibrio sp. dhg, a newly isolated and fast-growing microorganism. -
Development and Applications of Proton Transfer Reaction-Mass Spectrometry for Homeland Security: Trace Detection of Explosives
DEVELOPMENT AND APPLICATIONS OF PROTON TRANSFER REACTION-MASS SPECTROMETRY FOR HOMELAND SECURITY: TRACE DETECTION OF EXPLOSIVES by Ramón González-Méndez, MSc A thesis submitted to the University of Birmingham for the degree of DOCTOR OF PHILOSOPHY School of Physics and Astronomy The University of Birmingham, UK February 2017 University of Birmingham Research Archive e-theses repository This unpublished thesis/dissertation is copyright of the author and/or third parties. The intellectual property rights of the author or third parties in respect of this work are as defined by The Copyright Designs and Patents Act 1988 or as modified by any successor legislation. Any use made of information contained in this thesis/dissertation must be in accordance with that legislation and must be properly acknowledged. Further distribution or reproduction in any format is prohibited without the permission of the copyright holder. Abstract This thesis investigates the challenging task of sensitive and selective trace detection of explosive compounds by means of proton transfer reaction mass spectrometry (PTR-MS). In order to address this, new analytical strategies and hardware improvements, leading to new methodologies and analytical tools, have been developed and tested. These are, in order of the Chapters presented in this thesis, the switching of reagent ions, the implementation of a novel thermal desorption unit, and the use of an ion funnel drift tube or fast reduced electric field switching to modify the ion chemistry. In addition to these, a more fundamental study has been undertaken to investigate the reactions of picric acid (PiA) with a number of different reagent ions. The novel approaches described in this thesis have improved the PTR-MS technique by making it more versatile in terms of its analytical performance, namely providing assignment of chemical compounds with high confidence. -
Determination of Terpenoid Content in Pine by Organic Solvent Extraction and Fast-Gc Analysis
ORIGINAL RESEARCH published: 25 January 2016 doi: 10.3389/fenrg.2016.00002 Determination of Terpenoid Content in Pine by Organic Solvent Extraction and Fast-GC Analysis Anne E. Harman-Ware1* , Robert Sykes1 , Gary F. Peter2 and Mark Davis1 1 National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, USA, 2 School of Forest Resources and Conservation, University of Florida, Gainesville, FL, USA Terpenoids, naturally occurring compounds derived from isoprene units present in pine oleoresin, are a valuable source of chemicals used in solvents, fragrances, flavors, and have shown potential use as a biofuel. This paper describes a method to extract and analyze the terpenoids present in loblolly pine saplings and pine lighter wood. Various extraction solvents were tested over different times and temperatures. Samples were analyzed by pyrolysis-molecular beam mass spectrometry before and after extractions to monitor the extraction efficiency. The pyrolysis studies indicated that the optimal extraction method used a 1:1 hexane/acetone solvent system at 22°C for 1 h. Extracts from the hexane/acetone experiments were analyzed using a low thermal mass modular accelerated column heater for fast-GC/FID analysis. The most abundant terpenoids from Edited by: the pine samples were quantified, using standard curves, and included the monoter- Subba Rao Chaganti, University of Windsor, Canada penes, α- and β-pinene, camphene, and δ-carene. Sesquiterpenes analyzed included Reviewed by: caryophyllene, humulene, and α-bisabolene. Diterpenoid resin acids were quantified in Yu-Shen Cheng, derivatized extractions, including pimaric, isopimaric, levopimaric, palustric, dehydroabi- National Yunlin University of Science and Technology, Taiwan etic, abietic, and neoabietic acids. -
Estimation of Biogenic Volatile Organic Compounds (Bvocs)
1 Estimation of biogenic volatile organic compound (BVOC) 2 emissions from the terrestrial ecosystem in China using real-time 3 remote sensing data 4 M. Li, X. Huang, J. Li and Y. Song* 5 State Key Joint Laboratory of Environmental Simulation and Pollution Control, 6 Department of Environmental Science, Peking University, Beijing 100871, China 7 * Corresponding author: [email protected] 8 Abstract 9 Because of the high emission rate and reactivity, biogenic volatile organic 10 compounds (BVOCs) play a significant role in the terrestrial ecosystems, human health, 11 secondary pollution, global climate change and the global carbon cycle. Past 12 estimations of BVOC emissions in China on the national scale were based on outdated 13 empirical algorithms suggested around 10 years ago and coarsely-resolved 14 meteorological data, and there have been significant aging of the land surface 15 parameters in dynamic meteorological models and BVOC estimation models, leading 16 to large inaccuracies in the estimated results. To refine BVOC emission estimations for 17 China, we used the latest algorithms of MEGAN (Model of Emissions of Gases and 18 Aerosols from Nature), with modified MM5 (the Fifth-Generation Mesoscale Model) 19 providing highly resolved meteorological data, to estimate the biogenic emissions of 20 VOCs for China in 2006. Real-time MODIS (Moderate Resolution Imaging 21 Spectroradiometer) land-use and vegetative cover data were introduced in MM5 to 22 replace the land surface parameters and to improve the simulation performance of 23 MM5. Highly-resolved 8-day MODIS leaf area index (LAI) data were also used to 24 determine the influence of LAI and leaf age deviation from standard conditions. -
Investigation of Antifungal Mechanisms of Thymol in the Human Fungal Pathogen, Cryptococcus Neoformans
molecules Article Investigation of Antifungal Mechanisms of Thymol in the Human Fungal Pathogen, Cryptococcus neoformans Kwang-Woo Jung 1,*, Moon-Soo Chung 1, Hyoung-Woo Bai 1,2 , Byung-Yeoup Chung 1 and Sungbeom Lee 1,2,* 1 Radiation Research Division, Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute, Jeongeup-si 56212, Jeollabuk-do, Korea; [email protected] (M.-S.C.); [email protected] (H.-W.B.); [email protected] (B.-Y.C.) 2 Department of Radiation Science and Technology, University of Science and Technology, Daejeon 34113, Yuseong-gu, Korea * Correspondence: [email protected] (K.-W.J.); [email protected] (S.L.) Abstract: Due to lifespan extension and changes in global climate, the increase in mycoses caused by primary and opportunistic fungal pathogens is now a global concern. Despite increasing attention, limited options are available for the treatment of systematic and invasive mycoses, owing to the evo- lutionary similarity between humans and fungi. Although plants produce a diversity of chemicals to protect themselves from pathogens, the molecular targets and modes of action of these plant-derived chemicals have not been well characterized. Using a reverse genetics approach, the present study re- vealed that thymol, a monoterpene alcohol from Thymus vulgaris L., (Lamiaceae), exhibits antifungal Cryptococcus neoformans activity against by regulating multiple signaling pathways including cal- cineurin, unfolded protein response, and HOG (high-osmolarity glycerol) MAPK (mitogen-activated protein kinase) pathways. Thymol treatment reduced the intracellular concentration of Ca2+ by Citation: Jung, K.-W.; Chung, M.-S.; Bai, H.-W.; Chung, B.-Y.; Lee, S. -
TERPENES : Structural Classification and Biological Activities
IOSR Journal Of Pharmacy And Biological Sciences (IOSR-JPBS) e-ISSN:2278-3008, p-ISSN:2319-7676. Volume 16, Issue 3 Ser. I (May – June 2021), PP 25-40 www.Iosrjournals.Org TERPENES : structural classification and biological activities Florence Déclaire Mabou1*, Irma Belinda Nzeuwa Yossa2 1Department of Chemistry, Faculty of Science, University of Dschang, P.O. Box 96 Dschang, Cameroon 2Department of Pharmaceutical Sciences, Faculty of Medicine and Pharmaceutical Sciences, University of Dschang, P.O. Box 96 Dschang, Cameroon Corresponding author : (F.D. Mabou) Abstract Terpenes is a large group of compounds found in flowers, stems, leaves, roots and other parts of numerous plant species. They are built up from isoprene units with the general formula (C5H8)n. They can be grouped into classes according to the number of isoprene units (n) in the molecule: hemiterpenes (C5H8), monoterpenes (C10H16), sesquiterpenes (C15H24), diterpenes (C20H32), triterpenes (C30H48), tetraterpenes (C40H64), and polyterpenes (C5H8)n. Most of the terpenoids with the variation in their structures are biologically active and are used worldwide for the treatment of many diseases. Many terpenoids inhibited different human cancer cells and are used as anticancer drugs such as Taxol and its derivatives. Many flavorings and nice fragrances are consisting on terpenes because of its nice aroma. Terpenes and its derivatives are used as antimalarial drugs such as artemisinin and related compounds. Meanwhile, terpenoids play a diverse role in the field of foods, drugs, cosmetics, hormones, vitamins, and so on. This chapterprovides classification, biological activities and distribution of terpenes isolated currently from different natural sources. --------------------------------------------------------------------------------------------------------------------------------------- Date of Submission: 04-05-2021 Date of Acceptance: 17-05-2021 --------------------------------------------------------------------------------------------------------------------------------------- I. -
What Is Coenzyme Q10 (Coq10)?
What is Coenzyme Q10 (CoQ10)? CoQ10 is a benzoquinone containing 10 isoprene units, which allows it to diffuse rapidly through the inner mitochondrial membrane. In this setting, the molecule works as a lipophilic electron carrier for the respiratory chai n, transferring electrons from NADH, succinate and fatty acid oxidation intermediates to cytochromes. In other words, CoQ10 functions as an intermediary between two -electron carriers and the one -electron cytochromes (1). CoQ10 may also act as an antioxidan t (2). protecting cell structures (3). and other cell membranes (4). from oxidative damage by preventing lipid peroxidation. Since congestive heart failure is often accompanied by oxidative damage to the myocardium (5). and since CoQ10 levels are often dec reased in the myocardial cells of advanced heart failure patients (6). it is possible that supplementing CoQ10 levels could help alleviate the severity of heart disease. This hypothesis is bolstered by the fact that myocardial CoQ10 deficiency correlates with heart failure severity (6,7). To test the validity of this idea, let us examine the effects of CoQ10 in treating hypertrophic cardiomyopathy and congestive heart failure. Hypertrophic Cardiomyopathy (HCM) HCM is characterized primarily by a thickenin g of the left ventricle walls (usually the septal), as well as by significant impairment of left ventricular filling. Although standard disease treatment calls for negative inotropic drugs, this regimen relieves pain and palpitations without decreasing wal l thickness, and generally leads to worse fatigue and dyspnea. Given the decreased CoQ10 levels in diseased heart tissue, it is possible that the heart wall thickens in response to decreased myocardial energy production, such that cells become larger to co mpensate for reduced contractile efficiency.