Cladistic Analyses of Combined Traditional and Moleculardata
Proc. Natl. Acad. Sci. USA Vol. 92, pp. 244-248, January 1995 Evolution Cladistic analyses of combined traditional and molecular data sets reveal an algal lineage (18S rRNA/chromophyte/chrysophyte/diatom/phylogeny) GARY W. SAUNDERSt, DANIEL POTrERt, MICHAEL P. PASKIND§, AND ROBERT A. ANDERSENt$ tBotany School, University of Melbourne, Parkville, Victoria 3052, Australia; tBigelow Laboratory for Ocean Sciences, West Boothbay Harbor, ME 04575; and §BASF Research Corporation, Worcester, MA 01605 Communicated by Hewson Swift, University of Chicago, Chicago, IL, September 12, 1994 ABSTRACT The chromophyte algae are a large and bio- ultrastructural features, especially those of the flagellar appa- logically diverse assemblage of brown seaweeds, diatoms, and ratus. The eukaryotic flagellum (including cilium) probably other golden algae classified in 13 taxonomic classes. One evolved only once, and regardless of life stage, flagella are subgroup (diatoms, pedinellids, pelagophytes, silicoflagel- considered homologous; i.e., a flagellum of a sperm cell is lates, and certain enigmatic genera) is characterized by a considered homologous to that of a flagellate phytoplankter or highly reduced flagellar apparatus. The flagellar apparatus an asexual zoospore (10). Microtubular roots often anchor the lacks microtubular and fibrous roots, and the flagellum basal flagellum or flagella, and they are the major component of the body is attached directly to the nucleus. We hypothesize that cell's cytoskeleton (17), often being active in specific cell the flagellar reduction is the result of a single evolutionary activities [e.g., phagocytosis (18-20) and scale formation (21- series of events. Cladistic analysis of ultrastructural and 23)]. The flagellar apparatus in many chromophyte classes has biochemical data reveals a monophyletic group that unites all four microtubular roots, and in some cases a system II fiber or taxa with a reduced flagellar apparatus, supporting our rhizoplast is also present (Fig.
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