Biocatalysis and Pharmaceuticals a Smart Tool for Sustainable Development
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Sodium Dodecyl Sulfate
Catalog Number: 102918, 190522, 194831, 198957, 811030, 811032, 811033, 811034, 811036 Sodium dodecyl sulfate Structure: Molecular Formula: C12H25NaSO4 Molecular Weight: 288.38 CAS #: 151-21-3 Synonyms: SDS; Lauryl sulfate sodium salt; Dodecyl sulfate sodium salt; Dodecyl sodium sulfate; Sodium lauryl sulfate; Sulfuric acid monododecyl ester sodium salt Physical Appearance: White granular powder Critical Micelle Concentration (CMC): 8.27 mM (Detergents with high CMC values are generally easy to remove by dilution; detergents with low CMC values are advantageous for separations on the basis of molecular weight. As a general rule, detergents should be used at their CMC and at a detergent-to-protein weight ratio of approximately ten. 13,14 Aggregation Number: 62 Solubility: Soluble in water (200 mg/ml - clear, faint yellow solution), and ethanol (0.1g/10 ml) Description: An anionic detergent3 typically used to solubilize8 and denature proteins for electrophoresis.4,5 SDS has also been used in large-scale phenol extraction of RNA to promote the dissociation of protein from nucleic acids when extracting from biological material.12 Most proteins bind SDS in a ratio of 1.4 grams SDS to 1 gram protein. The charges intrinsic to the protein become insignificant compared to the overall negative charge provided by the bound SDS. The charge to mass ratio is essentially the same for each protein and will migrate in the gel based only on protein size. Typical Working Concentration: > 10 mg SDS/mg protein Typical Buffer Compositions: SDS Electrophoresis -
Sodium Dodecyl Sulfate-Coated Alumina and C18 Cartridge for The
J. Braz. Chem. Soc., Vol. 19, No. 8, 1523-1530, 2008. Printed in Brazil - ©2008 Sociedade Brasileira de Química 0103 - 5053 $6.00+0.00 Article Sodium Dodecyl Sulfate-Coated Alumina and C18 Cartridge for the Separation and Preconcentration of Cationic Surfactants Prior to their Quantitation by Spectrophotometric Method Mohammad Ali Karimi,*,a,b Reza Behjatmanesh-Ardakani,b Ali Aghaei Goudi b and Sara Zali b aDepartment of Chemistry, Faculty of Science, Payame Noor University (PNU), Sirjan, Iran bDepartment of Chemistry, Faculty of Science, Payame Noor University (PNU), Ardakan, Iran Um novo método de extração em fase sólida foi desenvolvido para separar e pré-concentrar traços de tensoativos catiônicos, tais como, brometo de dodeciltrimetilamônio (DTAB), brometo de cetiltrimetilamônio (CTAB) e cloreto de cetilpiridínio (CPC). Esse método é baseado na sorção do tensoativo aniônico (AS−), dodecilssulfato de sódio (SDS), sobre a superfície de γ-alumina, + enquanto um cartucho C18 é utilizado para a pré-concentração dos tensoativos catiônicos (CS ). O método espectrofotométrico, utilizado para a determinação dos tensoativos catiônicos, baseia-se na competição entre o corante catiônico, azul de metileno (MB+), e o CS+, para associação e formação do complexo SDS. O íon complexo formado (MB+) pode ser quantitativamente substituído pelo CS+, levando a um aumento da absorvância medida em 662 nm. Foram estabelecidas ótimas condições experimentais para a separação, pré-concentração e determinação dos tensoativos catiônicos. Sob essas condições otimizadas, realizou-se a pré-concentração (2×) e os resultados mostraram que a determinação do CPC, DTAB e CTAB poderia ser realizada nas faixas de concentração de 1×10-5-2×10-4, 4×10-5-5×10-4 and 5×10-5-5×10-4 mol L-1, respectivamente. -
Naturally Occurring Aurones and Chromones- a Potential Organic Therapeutic Agents Improvisingnutritional Security +Rajesh Kumar Dubey1,Priyanka Dixit2, Sunita Arya3
ISSN: 2319-8753 International Journal of Innovative Research in Science, Engineering and Technology (An ISO 3297: 2007 Certified Organization) Vol. 3, Issue 1, January 2014 Naturally Occurring Aurones and Chromones- a Potential Organic Therapeutic Agents ImprovisingNutritional Security +Rajesh Kumar Dubey1,Priyanka Dixit2, Sunita Arya3 Director General, PERI, M-2/196, Sector-H, Aashiana, Lucknow-226012,UP, India1 Department of Biotechnology, SVU Gajraula, Amroha UP, India1 Assistant Professor, MGIP, Lucknow, UP, India2 Assistant Professor, DGPG College, Kanpur,UP, India3 Abstract: Until recently, pharmaceuticals used for the treatment of diseases have been based largely on the production of relatively small organic molecules synthesized by microbes or by organic chemistry. These include most antibiotics, analgesics, hormones, and other pharmaceuticals. Increasingly, attention has focused on larger and more complex protein molecules as therapeutic agents. This publication describes the types of biologics produced in plants and the plant based organic therapeutic agent's production systems in use. KeyWords: Antecedent, Antibiotics; Anticancer;Antiparasitic; Antileishmanial;Antifungal Analgesics; Flavonoids; Hormones; Pharmaceuticals. I. INTRODUCTION Naturally occurring pharmaceutical and chemical significance of these compounds offer interesting possibilities in exploring their more pharmacological and biocidal potentials. One of the main objectives of organic and medicinal chemistry is the design, synthesis and production of molecules having value as human therapeutic agents [1]. Flavonoids comprise a widespread group of more than 400 higher plant secondary metabolites. Flavonoids are structurally derived from parent substance flavone. Many flavonoids are easily recognized as water soluble flower pigments in most flowering plants. According to their color, Flavonoids pigments have been classified into two groups:(a) The red-blue anthocyanin's and the yellow anthoxanthins,(b)Aurones are a class of flavonoids called anthochlor pigments[2]. -
Adaptive Radiations: from Field to Genomic Studies
Adaptive radiations: From field to genomic studies Scott A. Hodges and Nathan J. Derieg1 Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106 Adaptive radiations were central to Darwin’s formation of his phenotype–environment correlation, (iii) trait utility, and (iv) theory of natural selection, and today they are still the centerpiece rapid speciation. Monophyly and rapid speciation for many of for many studies of adaptation and speciation. Here, we review the the classic examples of adaptive radiation have been established advantages of adaptive radiations, especially recent ones, for by using molecular techniques [e.g., cichlids (4), Galapagos detecting evolutionary trends and the genetic dissection of adap- finches (5, 6), and Hawaiian silverswords (7)]. Ecological and tive traits. We focus on Aquilegia as a primary example of these manipulative experiments are used to identify and test pheno- advantages and highlight progress in understanding the genetic type–environmental correlations and trait utility. Ultimately, basis of flower color. Phylogenetic analysis of Aquilegia indicates such studies have pointed to the link between divergent natural that flower color transitions proceed by changes in the types of selection and reproductive isolation and, thus, speciation (3). anthocyanin pigments produced or their complete loss. Biochem- Studies of adaptive radiations have exploded during the last 20 ical, crossing, and gene expression studies have provided a wealth years. In a search of the ISI Web of Science with ‘‘adaptive of information about the genetic basis of these transitions in radiation’’ (limited to the subject area of evolutionary biology) Aquilegia. To obtain both enzymatic and regulatory candidate we found 80 articles published in 2008 compared with only 1 in genes for the entire flavonoid pathway, which produces antho- 1990. -
Sodium Lauryl Sulfate 1 Sodium Lauryl Sulfate
Sodium lauryl sulfate 1 Sodium lauryl sulfate Sodium dodecyl sulfate Identifiers [1] CAS number 151-21-3 [2] ATC code A06 AG11 Properties Molecular formula NaC H SO 12 25 4 Molar mass 288.38 g mol−1 Density 1.01 g/cm³ Melting point 206 °C [3] (what is this?) (verify) Except where noted otherwise, data are given for materials in their standard state (at 25 °C, 100 kPa) Infobox references Sodium lauryl sulfate (SLS), sodium laurilsulfate or sodium dodecyl sulfate (SDS or NaDS) (C H SO Na) is 12 25 4 an anionic surfactant used in many cleaning and hygiene products. The molecule has a tail of 12 carbon atoms, attached to a sulfate group, giving the molecule the amphiphilic properties required of a detergent. SLS is a highly effective surfactant and is used in any task requiring the removal of oily stains and residues. For example, it is found in higher concentrations with industrial products including engine degreasers, floor cleaners, and car wash soaps. It is used in lower concentrations with toothpastes, shampoos, and shaving foams. It is an important component in bubble bath formulations for its thickening effect and its ability to create a lather. Research showed that SLS is not carcinogenic when either applied directly to skin or consumed.[4] It has however been shown to irritate the skin of the face with prolonged and constant exposure (more than an hour) in young adults.[5] A clinical study found SLS toothpaste caused a higher frequency of aphthous ulcers than both cocoamidopropyl betaine or a detergent-free paste, on 30 patients with frequent occurrences of such ulcers.[6] A clinical study comparing toothpastes with and without SLS found that it had no significant effect on ulcer patterns.[7] Sodium lauryl sulfate 2 Applications SLS is a highly effective surfactant and is used in any task requiring the removal of oily stains and residues. -
Amplitaq and Amplitaq Gold DNA Polymerase
AmpliTaq and AmpliTaq Gold DNA Polymerase The Most Referenced Brand of DNA Polymerase in the World Date: 2005-05 Notes: Authors are listed alphabetically J. Biol. Chem. (223) Ezoe, S., I. Matsumura, et al. (2005). "GATA Transcription Factors Inhibit Cytokine-dependent Growth and Survival of a Hematopoietic Cell Line through the Inhibition of STAT3 Activity." J. Biol. Chem. 280(13): 13163-13170. http://www.jbc.org/cgi/content/abstract/280/13/13163 Although GATA-1 and GATA-2 were shown to be essential for the development of hematopoietic cells by gene targeting experiments, they were also reported to inhibit the growth of hematopoietic cells. Therefore, in this study, we examined the effects of GATA-1 and GATA-2 on cytokine signals. A tamoxifen-inducible form of GATA-1 (GATA-1/ERT) showed a minor inhibitory effect on interleukin-3 (IL-3)-dependent growth of an IL-3-dependent cell line Ba/F3. On the other hand, it drastically inhibited TPO-dependent growth and gp130-mediated growth/survival of Ba/F3. Similarly, an estradiol-inducible form of GATA-2 (GATA-2/ER) disrupted thrombopoietin (TPO)-dependent growth and gp130-mediated growth/survival of Ba/F3. As for this mechanism, we found that both GATA-1 and GATA-2 directly bound to STAT3 both in vitro and in vivo and inhibited its DNA-binding activity in gel shift assays and chromatin immunoprecipitation assays, whereas they hardly affected STAT5 activity. In addition, endogenous GATA-1 was found to interact with STAT3 in normal megakaryocytes, suggesting that GATA-1 may inhibit STAT3 activity in normal hematopoietic cells. -
Surfen, a Small Molecule Antagonist of Heparan Sulfate
Surfen, a small molecule antagonist of heparan sulfate Manuela Schuksz*†, Mark M. Fuster‡, Jillian R. Brown§, Brett E. Crawford§, David P. Ditto¶, Roger Lawrence*, Charles A. Glass§, Lianchun Wang*, Yitzhak Torʈ, and Jeffrey D. Esko*,** *Department of Cellular and Molecular Medicine, Glycobiology Research and Training Center, †Biomedical Sciences Graduate Program, ‡Department of Medicine, Division of Pulmonary and Critical Care Medicine and Veteran’s Administration San Diego Medical Center, ¶Moores Cancer Center, and ʈDepartment of Chemistry and Biochemistry, University of California at San Diego, La Jolla, CA 92093; and §Zacharon Pharmaceuticals, Inc, 505 Coast Blvd, South, La Jolla, CA 92037 Communicated by Carolyn R. Bertozzi, University of California, Berkeley, CA, June 18, 2008 (received for review May 26, 2007) In a search for small molecule antagonists of heparan sulfate, Surfen (bis-2-methyl-4-amino-quinolyl-6-carbamide) was first we examined the activity of bis-2-methyl-4-amino-quinolyl-6- described in 1938 as an excipient for the production of depot carbamide, also known as surfen. Fluorescence-based titrations insulin (16). Subsequent studies have shown that surfen can indicated that surfen bound to glycosaminoglycans, and the extent block C5a receptor binding (17) and lethal factor (LF) produced of binding increased according to charge density in the order by anthrax (18). It was also reported to have modest heparin- heparin > dermatan sulfate > heparan sulfate > chondroitin neutralizing effects in an oral feeding experiments in rats (19), sulfate. All charged groups in heparin (N-sulfates, O-sulfates, and but to our knowledge, no further studies involving heparin have carboxyl groups) contributed to binding, consistent with the idea been conducted, and its effects on HS are completely unknown. -
Hazard Communication Chemical Inventory Form
Hazard Communication Chemical Inventory Form ESTIM. CAS STATE QTY. USAGE ROOM SDS DATE OF CHEMICAL NAME COMMON NAME MANUFACTURER NUMBER S,L,G ON HAND PER YEAR CAMPUS NO. DEPARTMENT ? INV. 90wGear Oil NAPA L 5 gal 1 Gal AVC Auto shop Facilities Y 4/2/2018 Acetylene Gas Airgas USA G 33 cu ft 4 cu ft AVC Auto shop Facilities Y 4/2/2018 Antifreeze (Ethylene Glycol) NAPA L 1 gal 2 Gal AVC Auto shop Facilities Y 4/2/2018 Brakleen CRC Industries G 8 cans 12 Cans AVC Auto shop Facilities Y 4/2/2018 CBC Plus Bowl Cleaner ECOLAB L 60 72 AVC Auto shop Facilities Y 4/2/2018 DOT3 Brake Fluid NAPA Mixture L 1 QT 1 QT AVC Auto shop Facilities Y 4/2/2018 Hydraulic Oil NAPA L 10 gal 4 gal AVC Auto shop Facilities Y 4/2/2018 Motor Oil NAPA L 48 Qt 32 Qt AVC Auto shop Facilities Y 4/2/2018 Oxygen Gas Airgas USA G 33 cu ft 10 cu ft AVC Auto shop Facilities Y 4/2/2018 Toluidine Blue 2% Carolina 92-31-9 L 20mL 0mL AVC B112 Science SDS 1/22/2018 Isopropyl Alcohol 2-Propanol, Isopropanol JT Baker(Avantor) 67-63-0 L 75mL 5mL AVC B112 Science SDS 1/22/2018 Ammonium Molybdate ammonium molybdate(VI), tetrahydrate, molybdicFlinn acid 12027-67-7 S 15g 10g AVC B112 Science SDS 1/22/2018 Ammonium Chloride ammonium muriate, sal ammoniac Flinn 12125-02-9 S 40g 5g AVC B112 Science SDS 1/22/2018 Ethylene Glycol Anti-Freeze JT Baker(Avantor) 107-21-1 L 1.25L 10mL AVC B112 Science SDS 1/22/2018 Sodium Bicarbonate Baking Soda VWR (Wards) 144-55-8 S 1,020g 10g AVC B112 Science No 1/22/2018 Sodium Borate Borax VWR 1303-96-4 S 225g 10g AVC B112 Science SDS 1/22/2018 Calcium Metal -
Dermatan Sulfate Composition
Europäisches Patentamt *EP000671414B1* (19) European Patent Office Office européen des brevets (11) EP 0 671 414 B1 (12) EUROPEAN PATENT SPECIFICATION (45) Date of publication and mention (51) Int Cl.7: C08B 37/00, A61K 31/715 of the grant of the patent: 02.01.2002 Bulletin 2002/01 (86) International application number: PCT/JP94/01643 (21) Application number: 94927827.9 (87) International publication number: (22) Date of filing: 30.09.1994 WO 95/09188 (06.04.1995 Gazette 1995/15) (54) DERMATAN SULFATE COMPOSITION AS ANTITHROMBOTIC DERMATANSULFATEZUSAMMENSETZUNG ALS ANTITHROMOTISCHES MITTEL COMPOSITION DE DERMATANE SULFATE UTILISE COMME ANTITHROMBOTIQUE (84) Designated Contracting States: • YOSHIDA, Keiichi AT BE CH DE DK ES FR GB IT LI NL PT SE Tokyo 189 (JP) (30) Priority: 30.09.1993 JP 26975893 (74) Representative: Davies, Jonathan Mark Reddie & Grose 16 Theobalds Road (43) Date of publication of application: London WC1X 8PL (GB) 13.09.1995 Bulletin 1995/37 (56) References cited: (60) Divisional application: EP-A- 0 112 122 EP-A- 0 199 033 01201321.5 / 1 125 977 EP-A- 0 238 994 WO-A-93/05074 JP-A- 59 138 202 JP-B- 2 100 241 (73) Proprietor: SEIKAGAKU KOGYO KABUSHIKI JP-B- 6 009 042 KAISHA Tokyo 103 (JP) • CARBOHYDRATE RESEARCH , vol. 131, no. 2, 1984 NL, pages 301-314, K. NAGASAWA ET AL. (72) Inventors: ’The structure of rooster-comb dermatan • TAKADA, Akikazu sulfate. Characterization and quantitative Shizuoka 431-31 (JP) determination of copolymeric, isomeric tetra- • ONAYA, Junichi and hexa-saccharides’ Higashiyamato-shi Tokyo 207 (JP) • ARAI, Mikio Remarks: Higashiyamato-shi Tokyo 207 (JP) The file contains technical information submitted • MIYAUCHI, Satoshi after the application was filed and not included in this Tokyo 208 (JP) specification • KYOGASHIMA, Mamoru Tokyo 207 (JP) Note: Within nine months from the publication of the mention of the grant of the European patent, any person may give notice to the European Patent Office of opposition to the European patent granted. -
CYP2A6) by P53
Transcriptional Regulation of Human Stress Responsive Cytochrome P450 2A6 (CYP2A6) by p53 Hao Hu M.Biotech. (Biotechnology) 2012 The University of Queensland B.B.A. 2009 University of Electronic Science and Technology of China B.Sc. (Pharmacy) 2009 University of Electronic Science and Technology of China A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2016 School of Medicine ABSTRACT Human cytochrome P450 (CYP) 2A6 is highly expressed in the liver and the encoding gene is regulated by various stress activated transcription factors, such as the nuclear factor (erythroid-derived 2)-like 2 (Nrf-2). Unlike the other xenobiotic metabolising CYP enzymes (XMEs), CYP2A6 only plays a minor role in xenobiotic metabolism. The CYP2A6 is highly induced by multiple forms of cellular stress conditions, where XMEs expression is normally inhibited. Recent findings suggest that the CYP2A6 plays an important role in regulating BR homeostasis. A computer based sequence analysis on the 3 kb proximate CYP2A6 promoter revealed several putative binding sites for p53, a protein that mediates regulation of antioxidant and apoptosis pathways. In this study, the role of p53 in CYP2A6 gene regulation is demonstrated. The site closest to transcription start site (TSS) is highly homologous with the p53 consensus sequence. The p53 responsiveness of this site was confirmed by transfections with various stepwise deleted of CYP2A6-5’-Luc constructs containing the putative p53RE. Deletion of the putative p53RE resulted in a total abolishment of p53 responsiveness of CYP2A6 promoter. Specific binding of p53 to the putative p53RE was detected by electrophoresis mobility shift assay. -
Characterisation of Bilirubin Metabolic Pathway in Hepatic Mitochondria Siti Nur Fadzilah Muhsain M.Sc
Characterisation of Bilirubin Metabolic Pathway in Hepatic Mitochondria Siti Nur Fadzilah Muhsain M.Sc. (Medical Research) 2005 Universiti Sains Malaysia Postgrad. Dip. (Toxicology) 2003 University of Surrey B.Sc.(Biomed. Sc.) 2000 Universiti Putra Malaysia A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2014 School of Medicine ABSTRACT Bilirubin (BR), a toxic waste product of degraded haem, is a potent antioxidant at physiological concentrations. To achieve the maximum benefit of BR, its intracellular level needs to be carefully regulated. A system comprising of two enzymes, haem oxygenase-1 (HMOX1) and cytochrome P450 2A5 (CYP2A5) exists in the endoplasmic reticulum (ER), responsible for regulating BR homeostasis. This system is induced in response to oxidative stress. In this thesis, oxidative stress caused accumulation of these enzymes in mitochondria — major producers and targets of reactive oxygen species (ROS) — is demonstrated. To understand the significance of this intracellular targeting, properties of microsomal and mitochondrial BR metabolising enzymes were compared and the capacity of mitochondrial CYP2A5 to oxidise BR in response to oxidative stress is reported. Microsomes and mitochondrial fractions were isolated from liver homogenates of DBA/2J mice, administered with sub-toxic dose of pyrazole, an oxidant stressor. The purity of extracted organelles was determined by analysing the expressions and activities of their respective marker enzymes. HMOX1 and CYP2A5 were significantly increased in microsomes and even more so in mitochondria in response to pyrazole-induced oxidative stress. By contrast, the treatment did not increase either microsomes or mitochondrial Uridine-diphosphate-glucuronosyltransferase 1A1 (UGT1A1), the sole enzyme that catalyses BR elimination through glucuronidation. -
Molecular Breeding of Novel Yellow Flowers by Engineering the Aurone Biosynthetic Pathway
Transgenic Plant Journal ©2007 Global Science Books Molecular Breeding of Novel Yellow Flowers by Engineering the Aurone Biosynthetic Pathway Eiichiro Ono1* • Toru Nakayama2 1 Institute for Health Care Science, Suntory Ltd., Suntory Research Center, 1-1-1 Wakayamadai, Shimamoto, Mishima, Osaka 618-8503, Japan 2 Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-11 Aoba, Sendai, Miyagi 980-8579, Japan Corresponding author : * [email protected] ABSTRACT Aurone flavonoids confer a bright yellow color to flowers, such as snapdragon (Antirrhinum majus). A. majus aureusidin synthase (AmAS1), a polyphenol oxidase, was identified as the key enzyme catalyzing the oxidative formation of aurones from chalcones. To date, all known PPOs have been found to be localized in plastids, whereas flavonoid biosynthesis is thought to take place on the cytoplasmic surface of the endoplasmic reticulum. Interestingly, AmAS1 is transported to the vacuole lumen, but not to the plastid, via ER-to-Golgi trafficking. A sequence-specific vacuolar sorting determinant is encoded in the 53-residue N-terminal sequence of the precursor, demonstrating the first example of the biosynthesis of a flavonoid skeleton in vacuoles. Transgenic flowers overexpressing AmAS1, however, failed to produce aurones. The identification of A. majus chalcone 4'-O-glucosyltransferase (UGT88D3) showed that the glucosylation of chalcone by cytosolic UGT88D3 followed by oxidative cyclization by vacuolar aureusidin synthase is the biochemical basis of the formation of aurone 6-O-glucosides in vivo. Co-expression of the UGT88D3 and AmAS1 genes was sufficient for the accumulation of aurone 6-O-glucoside in transgenic flowers, suggesting that glucosylation facilitates vacuolar transport of chalcones.