A New Checklist of Lichenized Fungi Occurring in Thailand
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Ascomycota, Trypetheliaceae)
A peer-reviewed open-access journal MycoKeys 34: 25–34 (2018)Architrypethelium murisporum (Ascomycota, Trypetheliaceae)... 25 doi: 10.3897/mycokeys.34.23836 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Architrypethelium murisporum (Ascomycota, Trypetheliaceae), a remarkable new lichen species from Thailand challenging ascospore septation as an indicator of phylogenetic relationships Theerapat Luangsuphabool1, H. Thorsten Lumbsch2, Jittra Piapukiew3, Ek Sangvichien1 1 Department of Biology, Faculty of Science, Ramkhamhaeng University, Bangkok, Thailand2 Science & Edu- cation, The Field Museum, Chicago, Illinois, USA 3 Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok, Thailand Corresponding author: H. Thorsten Lumbsch ([email protected]) Academic editor: P. Divakar | Received 23 January 2018 | Accepted 21 April 2018 | Published 10 May 2018 Citation: Luangsuphabool T, Lumbsch HT, Piapukiew J, Sangvichien E (2018) Architrypethelium murisporum (Ascomycota, Trypetheliaceae), a remarkable new lichen species from Thailand challenging ascospore septation as an indicator of phylogenetic relationships. MycoKeys 34: 25–34. https://doi.org/10.3897/mycokeys.34.23836 Abstract Architrypethelium murisporum Luangsuphabool, Lumbsch & Sangvichien is described for a crustose lichen occurring in dry evergreen forest in Thailand. It is characterised by a green to yellow-green corticated thal- lus, perithecia fused in black pseudostromata with white rim surrounding the ostiole and small, hyaline and muriform ascospores. Currently, all species in the genus Architrypethelium have transversely septate ascospores, hence the discovery of this new species indicates that ascospore septation is variable within the genus, similar to numerous other groups of lichen-forming ascomycetes. Phylogenetic analyses of two loci (mtSSU and nuLSU) supported the position of the new species within Architrypethelium. -
Bibliography and Checklist of Foliicolous Lichenized Fungi up to 1992
93 Tropical Bryology 7:93-148, 1993 Bibliography and checklist of foliicolous lichenized fungi up to 1992 Farkas, E. E. Institute of Ecology and Botany, Hungarian Academy of Sciences, Vácrátót, H-2163, Hungary Sipman, H. J. M. Botanischer Garten und Botanisches Museum, Königin-Luise-Strasse 6-8, D- 14191 Berlin, Germany Abstract: Bibliographic records are presented of 324 scientific papers on foliicolous lichenized fungi published subsequent to Santesson’s survey of 1952. The 482 species presently known are listed in an alphabetical checklist, with references to important descriptions, keys and illustrations published by or after Santesson (1952), and an indication of the distribution. Also added are all synonyms used after 1952. Introductory chapters deal with the present state of research on foliicolous lichens and its history. The following new combination is proposed: Strigula smaragdula Fr. var. stellata (Nyl. & Cromb.)Farkas. Introduction In 1952 Santesson published a revision of list was far from complete. Moreover, the yearly the taxonomy of the obligately foliicolous liche- output of publications on the subject was increa- nized fungi, which included a survey of all sing rapidly, so that an updated version of the known taxa and of all relevant literature until bibliography and a checklist seemed necessary. that time. Since then, a large amount of new In this joint account, E. F. has contributed information on taxonomy, distribution, and to a most of the introduction, the bibliography and lesser extent ecology, has been published. This the list of new taxa after 1952 with literature information is contained in many papers in vari- citations, H. S. -
Foliicolous Lichens and Their Lichenicolous Fungi Collected During the Smithsonian International Cryptogamic Expedition to Guyana 1996
45 Tropical Bryology 15: 45-76, 1998 Foliicolous lichens and their lichenicolous fungi collected during the Smithsonian International Cryptogamic Expedition to Guyana 1996 Robert Lücking Lehrstuhl für Pflanzensystematik, Universität Bayreuth, D-95447 Bayreuth, Germany Abstract: A total of 233 foliicolous lichen species and 18 lichenicolous fungi are reported from Guyana as a result of the Smithsonian „International Cryptogamic Expedition to Guyana“ 1996. Three lichens and two lichenicolous fungi are new to science: Arthonia grubei sp.n., Badimia subelegans sp.n., Calopadia pauciseptata sp.n., Opegrapha matzeri sp.n. (lichenicolous on Amazonomyces sprucei), and Pyrenidium santessonii sp.n. (lichenicolous on Bacidia psychotriae). The new combination Strigula janeirensis (Bas.: Phylloporina janeirensis; syn.: Raciborskiella janeirensis) is proposed. Apart from Amazonomyces sprucei and Bacidia psychotriae, Arthonia lecythidicola (with the lichenicolous A. pseudopegraphina) and Byssolecania deplanata (with the lichenicolous Opegrapha cf. kalbii) are reported as new hosts for lichenicolous fungi. Arthonia pseudopegraphina growing on A. lecythidicola is the first known case of adelphoparasitism at generic level in foliicolous Arthonia. Arthonia flavoverrucosa, Badimia polillensis, and Byssoloma vezdanum are new records for the Neotropics, and 115 species are new for Guyana, resulting in a total of c. 280 genuine foliicolous species reported for that country, while Porina applanata and P. verruculosa are excluded from its flora. The foliicolous lichen flora of Guyana is representative for the Guianas (Guyana, Suriname, French Guiana) and has great affinities with the Amazon region, while the degree of endemism is low. A characteristic species for this area is Amazonomyces sprucei. Species composition is typical of Neotropical lowland to submontane humid forests, with a dominance of the genera Porina, Strigula, and Mazosia. -
1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families ⇑ Jolanta Miadlikowska A, , Frank Kauff B,1, Filip Högnabba C, Jeffrey C
Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, Soili Stenroos c,10 a Department of Biology, Duke University, Durham, NC 27708-0338, USA b FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany c Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland d Department of Ecology and Evolutionary Biology, Yale University, 358 ESC, 21 Sachem Street, New Haven, CT 06511, USA e Institut für Botanik, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria f Department of Plant Taxonomy and Nature Conservation, University of Gdan´sk, ul. Wita Stwosza 59, 80-308 Gdan´sk, Poland g Science and Education, The Field Museum, 1400 S. -
H. Thorsten Lumbsch VP, Science & Education the Field Museum 1400
H. Thorsten Lumbsch VP, Science & Education The Field Museum 1400 S. Lake Shore Drive Chicago, Illinois 60605 USA Tel: 1-312-665-7881 E-mail: [email protected] Research interests Evolution and Systematics of Fungi Biogeography and Diversification Rates of Fungi Species delimitation Diversity of lichen-forming fungi Professional Experience Since 2017 Vice President, Science & Education, The Field Museum, Chicago. USA 2014-2017 Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. Since 2014 Curator, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2013-2014 Associate Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2009-2013 Chair, Dept. of Botany, The Field Museum, Chicago, USA. Since 2011 MacArthur Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2006-2014 Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2005-2009 Head of Cryptogams, Dept. of Botany, The Field Museum, Chicago, USA. Since 2004 Member, Committee on Evolutionary Biology, University of Chicago. Courses: BIOS 430 Evolution (UIC), BIOS 23410 Complex Interactions: Coevolution, Parasites, Mutualists, and Cheaters (U of C) Reading group: Phylogenetic methods. 2003-2006 Assistant Curator, Dept. of Botany, The Field Museum, Chicago, USA. 1998-2003 Privatdozent (Assistant Professor), Botanical Institute, University – GHS - Essen. Lectures: General Botany, Evolution of lower plants, Photosynthesis, Courses: Cryptogams, Biology -
One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
Phytotaxa 18: 1–127 (2011) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Monograph PHYTOTAXA Copyright © 2011 Magnolia Press ISSN 1179-3163 (online edition) PHYTOTAXA 18 One hundred new species of lichenized fungi: a signature of undiscovered global diversity H. THORSTEN LUMBSCH1*, TEUVO AHTI2, SUSANNE ALTERMANN3, GUILLERMO AMO DE PAZ4, ANDRÉ APTROOT5, ULF ARUP6, ALEJANDRINA BÁRCENAS PEÑA7, PAULINA A. BAWINGAN8, MICHEL N. BENATTI9, LUISA BETANCOURT10, CURTIS R. BJÖRK11, KANSRI BOONPRAGOB12, MAARTEN BRAND13, FRANK BUNGARTZ14, MARCELA E. S. CÁCERES15, MEHTMET CANDAN16, JOSÉ LUIS CHAVES17, PHILIPPE CLERC18, RALPH COMMON19, BRIAN J. COPPINS20, ANA CRESPO4, MANUELA DAL-FORNO21, PRADEEP K. DIVAKAR4, MELIZAR V. DUYA22, JOHN A. ELIX23, ARVE ELVEBAKK24, JOHNATHON D. FANKHAUSER25, EDIT FARKAS26, LIDIA ITATÍ FERRARO27, EBERHARD FISCHER28, DAVID J. GALLOWAY29, ESTER GAYA30, MIREIA GIRALT31, TREVOR GOWARD32, MARTIN GRUBE33, JOSEF HAFELLNER33, JESÚS E. HERNÁNDEZ M.34, MARÍA DE LOS ANGELES HERRERA CAMPOS7, KLAUS KALB35, INGVAR KÄRNEFELT6, GINTARAS KANTVILAS36, DOROTHEE KILLMANN28, PAUL KIRIKA37, KERRY KNUDSEN38, HARALD KOMPOSCH39, SERGEY KONDRATYUK40, JAMES D. LAWREY21, ARMIN MANGOLD41, MARCELO P. MARCELLI9, BRUCE MCCUNE42, MARIA INES MESSUTI43, ANDREA MICHLIG27, RICARDO MIRANDA GONZÁLEZ7, BIBIANA MONCADA10, ALIFERETI NAIKATINI44, MATTHEW P. NELSEN1, 45, DAG O. ØVSTEDAL46, ZDENEK PALICE47, KHWANRUAN PAPONG48, SITTIPORN PARNMEN12, SERGIO PÉREZ-ORTEGA4, CHRISTIAN PRINTZEN49, VÍCTOR J. RICO4, EIMY RIVAS PLATA1, 50, JAVIER ROBAYO51, DANIA ROSABAL52, ULRIKE RUPRECHT53, NORIS SALAZAR ALLEN54, LEOPOLDO SANCHO4, LUCIANA SANTOS DE JESUS15, TAMIRES SANTOS VIEIRA15, MATTHIAS SCHULTZ55, MARK R. D. SEAWARD56, EMMANUËL SÉRUSIAUX57, IMKE SCHMITT58, HARRIE J. M. SIPMAN59, MOHAMMAD SOHRABI 2, 60, ULRIK SØCHTING61, MAJBRIT ZEUTHEN SØGAARD61, LAURENS B. SPARRIUS62, ADRIANO SPIELMANN63, TOBY SPRIBILLE33, JUTARAT SUTJARITTURAKAN64, ACHRA THAMMATHAWORN65, ARNE THELL6, GÖRAN THOR66, HOLGER THÜS67, EINAR TIMDAL68, CAMILLE TRUONG18, ROMAN TÜRK69, LOENGRIN UMAÑA TENORIO17, DALIP K. -
One Hundred and Seventy-Five New Species of Graphidaceae: Closing the Gap Or a Drop in the Bucket?
Phytotaxa 189 (1): 007–038 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Article PHYTOTAXA Copyright © 2014 Magnolia Press ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.189.1.4 One hundred and seventy-five new species of Graphidaceae: closing the gap or a drop in the bucket? ROBERT LÜCKING1, MARK K. JOHNSTON1, ANDRÉ APTROOT2, EKAPHAN KRAICHAK1, JAMES C. LENDEMER3, KANSRI BOONPRAGOB4, MARCELA E. S. CÁCERES5, DAMIEN ERTZ6, LIDIA ITATI FERRARO7, ZE-FENG JIA8, KLAUS KALB9,10, ARMIN MANGOLD11, LEKA MANOCH12, JOEL A. MERCADO-DÍAZ13, BIBIANA MONCADA14, PACHARA MONGKOLSUK4, KHWANRUAN BUTSATORN PAPONG 15, SITTIPORN PARNMEN16, ROUCHI N. PELÁEZ14, VASUN POENGSUNGNOEN17, EIMY RIVAS PLATA1, WANARUK SAIPUNKAEW18, HARRIE J. M. SIPMAN19, JUTARAT SUTJARITTURAKAN10,18, DRIES VAN DEN BROECK6, MATT VON KONRAT1, GOTHAMIE WEERAKOON20 & H. THORSTEN 1 LUMBSCH 1Science & Education, The Field Museum, 1400 South Lake Shore Drive, Chicago, Illinois 60605-2496, U.S.A.; email: [email protected], [email protected], [email protected], [email protected] 2ABL Herbarium, G.v.d.Veenstraat 107, NL-3762 XK Soest, The Netherlands; email: [email protected] 3Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY 10458-5126, U.S.A.; email: [email protected] 4Lichen Research Unit, Department of Biology, Faculty of Science, Ramkhamhaeng University, Ramkhamhaeng 24 road, Bangkok, 10240 Thailand; email: [email protected] 5Departamento de Biociências, Universidade Federal de Sergipe, CEP: 49500-000, -
Phylogeny, Taxonomy and Diversification Events in the Caliciaceae
Fungal Diversity DOI 10.1007/s13225-016-0372-y Phylogeny, taxonomy and diversification events in the Caliciaceae Maria Prieto1,2 & Mats Wedin1 Received: 21 December 2015 /Accepted: 19 July 2016 # The Author(s) 2016. This article is published with open access at Springerlink.com Abstract Although the high degree of non-monophyly and Calicium pinicola, Calicium trachyliodes, Pseudothelomma parallel evolution has long been acknowledged within the occidentale, Pseudothelomma ocellatum and Thelomma mazaediate Caliciaceae (Lecanoromycetes, Ascomycota), a brunneum. A key for the mazaedium-producing Caliciaceae is natural re-classification of the group has not yet been accom- included. plished. Here we constructed a multigene phylogeny of the Caliciaceae-Physciaceae clade in order to resolve the detailed Keywords Allocalicium gen. nov. Calicium fossil . relationships within the group, to propose a revised classification, Divergence time estimates . Lichens . Multigene . and to perform a dating study. The few characters present in the Pseudothelomma gen. nov available fossil and the complex character evolution of the group affects the interpretation of morphological traits and thus influ- ences the assignment of the fossil to specific nodes in the phy- Introduction logeny, when divergence time analyses are carried out. Alternative fossil assignments resulted in very different time es- Caliciaceae is one of several ascomycete groups characterized timates and the comparison with the analysis based on a second- by producing prototunicate (thin-walled and evanescent) asci ary calibration demonstrates that the most likely placement of the and a mazaedium (an accumulation of loose, maturing spores fossil is close to a terminal node rather than a basal placement in covering the ascoma surface). -
Godere (Ethiopia), Budongo (Uganda) and Kakamega (Kenya)
EFFECTS OF ANTHROPOGENIC DISTURBANCE ON THE DIVERSITY OF FOLIICOLOUS LICHENS IN TROPICAL RAINFORESTS OF EAST AFRICA: GODERE (ETHIOPIA), BUDONGO (UGANDA) AND KAKAMEGA (KENYA) Dissertation Zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaft Fachbereich 3: Mathematik/Naturwissenschaften Universität Koblenz-Landau Vorgelegt am 23. Mai 2008 von Kumelachew Yeshitela geb. am 11. April 1965 in Äthiopien Referent: Prof. Dr. Eberhard Fischer Korreferent: Prof. Dr. Emanuël Sérusiaux In Memory of my late mother Bekelech Cheru i Table of Contents Abstract……………………………………………………………………………….......…...iii Chapter 1. GENERAL INTRODUCTION.................................................................................1 1.1 Tropical Rainforests .........................................................................................................1 1.2 Foliicolous lichens............................................................................................................5 1.3 Objectives .........................................................................................................................8 Chapter 2. GENERAL METHODOLOGY..............................................................................10 2.1 Foliicolous lichen sampling............................................................................................10 2.2 Foliicolous lichen identification.....................................................................................10 2.3 Data Analysis..................................................................................................................12 -
A Multigene Phylogenetic Synthesis for the Class Lecanoromycetes (Ascomycota): 1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families
A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., ... & Stenroos, S. (2014). A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution, 79, 132-168. doi:10.1016/j.ympev.2014.04.003 10.1016/j.ympev.2014.04.003 Elsevier Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, -
Adiciones a La Biota De Líquenes De La Isla Del Coco, Puntarenas, Costa Rica
Adiciones a la biota de líquenes de la Isla del Coco, Puntarenas, Costa Rica Loengrin Alfonso Umaña-Tenorio1 1. Departamento de Historia Natural, Museo Nacional de Costa Rica, Apdo. 749-1000, San José, Costa Rica; [email protected] Recibido 30-I-2019. Corregido 26-IV-2019. Aceptado 20-VI-2019. ABSTRACT. Additions to the lichen biota of Isla del Coco, Puntarenas, Costa Rica. Introduction: The flo- ristic composition of Isla del Coco is relatively well known. While studies have been typically oriented to flow- ering plants, other organisms such as lichens remain understudied. Objective: The purpose of this inventory is to expand the documentation of lichen species found in Isla del Coco, by reviewing literature and herbarium col- lections, as well as new collections, to facilitate the understanding of the diversity of said organisms. Methods: A list of the collections deposited in several herbaria was prepared, complemented with the bibliographical references of previous works. In addition, a field trip to collect and photograph specimens was performed in November 2017. The names of the species were adapted according to the online database Index Fungorum. Results: A total of 284 specimens were studied, corresponding to 173 different taxa, including 40 new records. Twenty-five taxa were identified at the genus level and 148 at the species level. The specimens were distributed in 23 families and 66 genera. The best-represented families are Graphidaceae (37 spp.), Pilocarpaceae (34 spp.) and Collemataceae (8 spp.). Porina (17 spp.) and Strigula (14 spp.) were the most diverse genera. The major- ity (52%) of the 148 species have a pantropical distribution, 34% are Neotropical and 13% are cosmopolitan. -
Tropical Mycology: Volume 2, Micromycetes
Tropical Mycology: Volume 2, Micromycetes Tropical Mycology: Volume 2, Micromycetes Edited by Roy Watling, Juliet C. Frankland, A.M. Ainsworth, Susan Isaac and Clare H. Robinson CABI Publishing CABI Publishing is a division of CAB International CABI Publishing CABI Publishing CAB International 10 E 40th Street Wallingford Suite 3203 Oxon OX10 8DE New York, NY 10016 UK USA Tel: +44 (0)1491 832111 Tel: +1 212 481 7018 Fax: +44 (0)1491 833508 Fax: +1 212 686 7993 Email: [email protected] Email: [email protected] Web site: www.cabi-publishing.org © CAB International 2002. All rights reserved. No part of this publication may be reproduced in any form or by any means, electronically, mechanically, by photocopying, recording or otherwise, without the prior permission of the copyright owners. A catalogue record for this book is available from the British Library, London, UK. Library of Congress Cataloging-in-Publication Data Tropical mycology / edited by Roy Watling ... [et al.]. p. cm. Selected papers of the Millenium Symposium held April 2000 at the Liverpool John Moores University and organized by the British Mycological Society. Includes bibliographical references and index. Contents: v. 1. Macromycetes. ISBN 0-85199-542-X (v. 1 : alk. paper) 1. Mycology--Tropics--Congresses. 2. Fungi--Tropics--Congresses. I. Watling, Roy. QK615.7.T76 2001 616.9¢69¢00913--dc21 2001025877 ISBN 0 85199 543 8 Typeset in Photina by Wyvern 21 Ltd. Printed and bound in the UK by Biddles Ltd, Guildford and King’s Lynn. Contents Dedication vii Contributors ix Preface xi 1 Why Study Tropical Fungi? 1 D.L.