Tropical Mycology: Volume 2, Micromycetes
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Downy Mildew of Pearl Millet and Its Management
Downy Mildew of Pearl Millet and its Management HS Shetty, S Niranjan Raj, KR Kini, HR Bishnoi, R Sharma BS Rajpurohit, RS Mahala, HP Yadav, SK Gupta and OP Yadav All India Coordinated Research Project on Pearl Millet (Indian Council of Agricultural Research) Mandor, Jodhpur 342 304, Rajasthan, India Correct Citation: Shetty HS, Raj Niranjan S, Kini KR, Bishnoi HR, Sharma R, Rajpurohit BS, Mahala RS, Yadav HP, Gupta SK and Yadav OP. 2016. Downy Mildew of Pearl Millet and its Management. All In- dia Coordinated Research Project on Pearl Millet (Indian Council of Agricultural Research), Mandor, Jodhpur – 342 304. 53 pp. Lasertypeset & printed at M/s Royal Offset Printers, A-89/1, Naraina Industrial Area, Phase-I, New Delhi-110028 Downy Mildew of Pearl Millet and its Management Content Chapter Page No. 1. Introduction 1 2. Diseases of pearl millet 1 3. Downy mildew 2 3.1 Host range 2 3.2 Symptoms 3 3.3 Yield losses 4 3.4 Pathogen biology 5 3.5 Disease cycle 7 3.6 Establishment of pathogen culture and maintenance of isolates 9 3.7 Epidemiology 11 3.8 Screening techniques 13 3.9 Variability in pathogen 18 4. Downy mildew management 30 4.1 Host - plant resistance 30 4.2 Genetic diversification of hybrids 34 4.3 Chemical control 35 4.4 Cultural methods 37 4.5 Biological control 38 4.6 Integrated disease management 41 5. Future thrust 42 6. References 44 v vi Tables Table 1 Downy mildew incidence (%) in PMDMVN-2014 at soft dough stage across 11 locations in India Table 2 On-farm surveys conducted in India to monitor the prevalence of downy mildew -
INHERITANCE of AVIRULENCE in Sclerospora Graminicola (Schroet) and RESISTANCE in PEARL MILLET to the PATHOGEN
INHERITANCE OF AVIRULENCE IN Sclerospora graminicola (Schroet) AND RESISTANCE IN PEARL MILLET TO THE PATHOGEN CHANDRAMANI RAJ M.Sc. (Ag.) DOCTOR OF PHILOSOPHY IN AGRICULTURE (PLANT PATHOLOGY) 2017 INHERITANCE OF AVIRULENCE IN Sclerospora graminicola (Schroet) AND RESISTANCE IN PEARL MILLET TO THE PATHOGEN BY CHANDRAMANI RAJ M.Sc. (Ag.) THESIS SUBMITTED TO THE PROFESSOR JAYASHANKAR TELANGANA STATE AGRICULTURAL UNIVERSITY IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE AWARD OF THE DEGREE OF DOCTOR OF PHILOSOPHY IN AGRICULTURE (PLANT PATHOLOGY) CHAIRPERSON: Dr. B. PUSHAPAVATHI DEPARTMENT OF PLANT PATHOLOGY COLLEGE OF AGRICULTURE RAJENDRANAGAR HYDERABAD-500 030 PROFESSOR JAYASHANKAR TELANGANA STATE AGRICULTURAL UNIVERSITY 2017 DECLARATION I, CHANDRAMANI RAJ, hereby declare that the thesis entitled “INHERITANCE OF AVIRULENCE IN Sclerospora graminicola (SCHROET) AND RESISTANCE IN PEARL MILLET TO THE PATHOGEN” submitted to the Professor Jayashankar Telangana State Agricultural University for the degree of DOCTOR OF PHILOSOPHY IN AGRICULTURE is the result of original research work done by me. I also declare that no material contained in this thesis has been published earlier in any manner. Place: Rajendranagar (CHANDRAMANI RAJ) Date: I. D. No. RAD/12-19 CERTIFICATE Mr. CHANDRAMANI RAJ has satisfactorily prosecuted the course of research and that thesis entitled “INHERITANCE OF AVIRULENCE IN Sclerospora graminicola (SCHROET) AND RESISTANCE IN PEARL MILLET TO THE PATHOGEN” submitted is the result of original research and is of sufficiently high -
Revision of the Verrucaria Elaeomelaena Species Complex and Morphologically Similar Freshwater Lichens (Verrucariaceae, Ascomycota)
Phytotaxa 197 (3): 161–185 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.197.3.1 Revision of the Verrucaria elaeomelaena species complex and morphologically similar freshwater lichens (Verrucariaceae, Ascomycota) THÜS, H.1, ORANGE, A.2, GUEIDAN, C.1,3, PYKÄLÄ, J.4, RUBERti, C.5, Lo SCHIAVO, F.5 & NAscimBENE, J.5 1Life Sciences Department, The Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom. [email protected] 2Department of Biodiversity and Systematic Biology, National Museum Wales, Cathays Park, Cardiff CF10 3NP, United Kingdom. 3CSIRO, NRCA, Australian National Herbarium, GPO Box 1600, Canberra ACT 2601 Australia (current address) 4Finnish Environment Institute, Natural Environment Centre, P.O. Box 140, FI-00251 Helsinki, Finland. 5Department of Biology, University of Padua, via Ugo Bassi 58/b, 35121, Padova Abstract The freshwater lichens Verrucaria elaeomelaena, V. alpicola, and V. funckii (Verrucariaceae/Ascomycota) have long been confused with V. margacea and V. placida and conclusions on the substratum preference and distribution have been obscured due to misidentifications. Independent phylogenetic analyses of a multigene dataset (RPB1, mtSSU, nuLSU) and an ITS- dataset combined with morphological and ecological characters confirm that the Verrucaria elaeomelaena agg. consists of several cryptic taxa. It includes V. elaeomelaena s.str. with mostly grey to mid-brown thalli and transparent exciple base which cannot be distinguished morphologically from several other unnamed clades from low elevations, the semi-cryptic V. humida spec. nov., which is characterised by smaller perithecia, shorter and more elongated spores compared to other species in this group and V. -
A Five-Gene Phylogeny of Pezizomycotina
Mycologia, 98(6), 2006, pp. 1018–1028. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 A five-gene phylogeny of Pezizomycotina Joseph W. Spatafora1 Burkhard Bu¨del Gi-Ho Sung Alexandra Rauhut Desiree Johnson Department of Biology, University of Kaiserslautern, Cedar Hesse Kaiserslautern, Germany Benjamin O’Rourke David Hewitt Maryna Serdani Harvard University Herbaria, Harvard University, Robert Spotts Cambridge, Massachusetts 02138 Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 97331 Wendy A. Untereiner Department of Botany, Brandon University, Brandon, Franc¸ois Lutzoni Manitoba, Canada Vale´rie Hofstetter Jolanta Miadlikowska Mariette S. Cole Vale´rie Reeb 2017 Thure Avenue, St Paul, Minnesota 55116 Ce´cile Gueidan Christoph Scheidegger Emily Fraker Swiss Federal Institute for Forest, Snow and Landscape Department of Biology, Duke University, Box 90338, Research, WSL Zu¨ rcherstr. 111CH-8903 Birmensdorf, Durham, North Carolina 27708 Switzerland Thorsten Lumbsch Matthias Schultz Robert Lu¨cking Biozentrum Klein Flottbek und Botanischer Garten der Imke Schmitt Universita¨t Hamburg, Systematik der Pflanzen Ohnhorststr. 18, D-22609 Hamburg, Germany Kentaro Hosaka Department of Botany, Field Museum of Natural Harrie Sipman History, Chicago, Illinois 60605 Botanischer Garten und Botanisches Museum Berlin- Dahlem, Freie Universita¨t Berlin, Ko¨nigin-Luise-Straße Andre´ Aptroot 6-8, D-14195 Berlin, Germany ABL Herbarium, G.V.D. Veenstraat 107, NL-3762 XK Soest, The Netherlands Conrad L. Schoch Department of Botany and Plant Pathology, Oregon Claude Roux State University, Corvallis, Oregon 97331 Chemin des Vignes vieilles, FR - 84120 MIRABEAU, France Andrew N. Miller Abstract: Pezizomycotina is the largest subphylum of Illinois Natural History Survey, Center for Biodiversity, Ascomycota and includes the vast majority of filamen- Champaign, Illinois 61820 tous, ascoma-producing species. -
H. Thorsten Lumbsch VP, Science & Education the Field Museum 1400
H. Thorsten Lumbsch VP, Science & Education The Field Museum 1400 S. Lake Shore Drive Chicago, Illinois 60605 USA Tel: 1-312-665-7881 E-mail: [email protected] Research interests Evolution and Systematics of Fungi Biogeography and Diversification Rates of Fungi Species delimitation Diversity of lichen-forming fungi Professional Experience Since 2017 Vice President, Science & Education, The Field Museum, Chicago. USA 2014-2017 Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. Since 2014 Curator, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2013-2014 Associate Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2009-2013 Chair, Dept. of Botany, The Field Museum, Chicago, USA. Since 2011 MacArthur Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2006-2014 Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2005-2009 Head of Cryptogams, Dept. of Botany, The Field Museum, Chicago, USA. Since 2004 Member, Committee on Evolutionary Biology, University of Chicago. Courses: BIOS 430 Evolution (UIC), BIOS 23410 Complex Interactions: Coevolution, Parasites, Mutualists, and Cheaters (U of C) Reading group: Phylogenetic methods. 2003-2006 Assistant Curator, Dept. of Botany, The Field Museum, Chicago, USA. 1998-2003 Privatdozent (Assistant Professor), Botanical Institute, University – GHS - Essen. Lectures: General Botany, Evolution of lower plants, Photosynthesis, Courses: Cryptogams, Biology -
Molecular Identification of Fungi
Molecular Identification of Fungi Youssuf Gherbawy l Kerstin Voigt Editors Molecular Identification of Fungi Editors Prof. Dr. Youssuf Gherbawy Dr. Kerstin Voigt South Valley University University of Jena Faculty of Science School of Biology and Pharmacy Department of Botany Institute of Microbiology 83523 Qena, Egypt Neugasse 25 [email protected] 07743 Jena, Germany [email protected] ISBN 978-3-642-05041-1 e-ISBN 978-3-642-05042-8 DOI 10.1007/978-3-642-05042-8 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2009938949 # Springer-Verlag Berlin Heidelberg 2010 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilm or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Cover design: WMXDesign GmbH, Heidelberg, Germany, kindly supported by ‘leopardy.com’ Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Dedicated to Prof. Lajos Ferenczy (1930–2004) microbiologist, mycologist and member of the Hungarian Academy of Sciences, one of the most outstanding Hungarian biologists of the twentieth century Preface Fungi comprise a vast variety of microorganisms and are numerically among the most abundant eukaryotes on Earth’s biosphere. -
Chytridiomycosis Causes Amphibian Mortality Associated with Population Declines in the Rain Forests of Australia and Central America
Proc. Natl. Acad. Sci. USA Vol. 95, pp. 9031–9036, July 1998 Population Biology Chytridiomycosis causes amphibian mortality associated with population declines in the rain forests of Australia and Central America LEE BERGERa,b,c,RICK SPEAREa,PETER DASZAKd,D.EARL GREENe,ANDREW A. CUNNINGHAMf,C.LOUISE GOGGINg, RON SLOCOMBEh,MARK A. RAGANi,ALEX D. HYATTb,KEITH R. MCDONALDj,HARRY B. HINESk,KAREN R. LIPSl, GERRY MARANTELLIm, AND HELEN PARKESb aSchool of Public Health and Tropical Medicine, James Cook University, Townsville, Queensland 4811, Australia; bAustralian Animal Health Laboratory, Commonwealth Scientific and Industrial Research Organization, Ryrie Street, Geelong, Victoria 3220, Australia; dSchool of Life Sciences, Kingston University, Kingston-upon-Thames, Surrey KT1 2EE, United Kingdom; eMaryland Animal Health Laboratory, College Park, MD 20740; fInstitute of Zoology, Zoological Society of London, Regent’s Park, London NW1 4RY, United Kingdom; gCommonwealth Scientific and Industrial Research Organization, Marine Research, Hobart, Tasmania 7001, Australia; hVeterinary Clinical Centre, University of Melbourne, Werribee, Victoria 3030, Australia; iCanadian Institute for Advanced Research, Program in Evolutionary Biology, National Research Council of Canada, Halifax, NS Canada B3H 3Z1; jConservation Strategy Branch, Queensland Department of Environment, Atherton, Queensland 4883, Australia; kConservation Resource Unit, Queensland Department of Environment, Moggill, Queensland 4070, Australia; lDepartment of Zoology, Southern Illinois University, Carbondale, IL 62901-6501; and mAmphibian Research Centre, 15 Suvla Grove, Nth Coburg, Victoria 3058, Australia Edited by Robert May, University of Oxford, Oxford, United Kingdom, and approved May 18, 1998 (received for review March 9, 1998) ABSTRACT Epidermal changes caused by a chytridiomy- primary degraders or saprobes, using substrates such as chitin, cete fungus (Chytridiomycota; Chytridiales) were found in plant detritus, and keratin. -
Bioimaging Structural Signatures of the Oomycete Pathogen Sclerospora Graminicola in Pearl Millet Using Different Microscopic Te
www.nature.com/scientificreports OPEN Bioimaging structural signatures of the oomycete pathogen Sclerospora graminicola in pearl millet using diferent microscopic techniques Hunthrike Shekar Shetty1, Sharada Mysore Suryanarayan2, Sudisha Jogaiah3*, Aditya Rao Shimoga Janakirama1, Michael Hansen4, Hans Jørgen Lyngs Jørgensen 4 & Lam-Son Phan Tran5,6* In this case study, the mycelium growth of Sclerospora graminicola in the infected tissues of pearl millet and the process of sporulation and liberation of sporangia and zoospores were observed using four diferent microscopic techniques. The cotton blue-stained samples observed under light microscope revealed the formation of zoospores with germ tubes, appressoria and initiation of haustorium into the host cells, while the environmental scanning electron microscopy showed the rapid emergence of sporangiophores with dispersed sporangia around the stomata. For fuorescence microscopy, the infected leaf samples were stained with Fluorescent Brightener 28 and Calcofuor White, which react with β-glucans present in the mycelial walls, sporangiophores and sporangia. Calcofour White was found to be the most suitable for studying the structural morphology of the pathogen. Therefore, samples observed by confocal laser scanning microscopy (CLSM) were pre-treated with Calcofuor White, as well as with Syto-13 that can stain the cell nuclei. Among the four microscopic techniques, CLSM is ideal for observing live host-pathogen interaction and studying the developmental processes of the pathogen in the host tissues. The use of diferent microscopic bioimaging techniques to study pathogenesis will enhance our understanding of the morphological features and development of the infectious propagules in the host. Many oomycete plant pathogens cause a considerable loss in food crops, including cereals, legumes, oil seeds, vegetables, and fruit crops1. -
Supplemental Material
Supplemental material Supplementary Figures ........................................................................................................................................... 2 Figure S1: GC distribution per origin for all nine diatom species. ......................................................................................... 2 Figure S2: Distribution of HGT genes across chromosome-level diatom genomes. .............................................................. 3 Figure S3: CDS length per age category per origin across species. ........................................................................................ 4 Figure S4: Gene ontology enrichment of HGT genes across diatoms. ................................................................................... 5 Figure S5: Functional domain enrichment of HGT genes across diatoms.............................................................................. 6 Figure S6: Correlation between diatom gene abundance and nitrate concentration at surface depth. ............................... 7 Figure S7: Correlation between diatom gene abundance and sampling day length at surface depth. ................................. 8 Figure S8: Correlation between diatom gene abundance and water temperature at surface depth. .................................. 9 Figure S9: Correlation between diatom gene abundance and iron concentration at surface depth. ................................. 10 Figure S10: Gene organization of the bifid shunt operon. ................................................................................................. -
October-2009-Inoculum.Pdf
Supplement to Mycologia Vol. 60(5) October 2009 Newsletter of the Mycological Society of America — In This Issue — Feature Article Fungal zoospores are valuable food Fungal zoospores are valuable food resources in aquatic ecosystems resources in aquatic ecosystems MSA Business President’s Corner By Frank H. Gleason, Maiko Kagami, Secretary’s Email Express Agostina V. Marano and Telesphore Simi-Ngando MSA Officers 2009 –2010 MSA 2009 Annual Reports Fungal zoospores are known to contain large quantities Minutes of the 2009 MSA Annual Council Meeting Minutes of the MSA 2009 Annual Business Meeting of glycogen and lipids in the form of endogenous reserves. MSA 2009 Award Winners Lipids are considered to be high energy compounds, some of MSA 2009 Abstracts (Additional) which are important for energy storage. Lipids can be con - Mycological News A North American Flora for Mushroom-Forming Fungi tained in membrane bound vesicles called lipid globules Marine Mycology Class which can easily be seen in the cytoplasm of fungal Mycohistorybytes Peripatetic Mycology zoospores with both the light and electron microscopes Student Research Opportunities in Thailand (Munn et al . 1981; Powell 1993; Barr 2001). Koch (1968) MSA Meeting 2010 MycoKey version 3.2 and Bernstein (1968) both noted variation in the size and MycoRant numbers of lipoid globules within zoospores in the light mi - Dr Paul J Szaniszlo croscope. The ultrastructure of the lipid globule complex Symposium : Gondwanic Connections in Fungi Mycologist’s Bookshelf was carefully examined by Powell and Roychoudhury A Preliminary Checklist of Micromycetes in Poland (1992). Fungal Pathogenesis in Plants and Crops Pathogenic Fungi in the Cryphonectriaceae Preliminary studies reviewed by Cantino and Mills Recently Received Books (1976) revealed a rich supply of lipids in the cells of Blasto - Take a Break cladiella emersonii . -
Australasian Lichenology Australasian Lichenology Number 45, July 1999 Number 45, July 1999
Australasian Lichenology Australasian Lichenology Number 45, July 1999 Number 45, July 1999 Byssoloma sublmdulatllm lmm Byssoloma subdiscordans lmm ANNOUNCEMENTS Dampier 300, Biodiversity in Australia, Perth, 1999 .................................. ....... 2 14th meeting of Australasian lichenologists, Melbourne, 1999 ......................... 2 4th IAL Symposium, Barcelona, 2000 ..... .. .......................................................... 2 The Southern Connection, Christchurch, 2000 .. ............................ ..................... 3 ADDITIONAL LICHEN RECORDS FROM AUSTRALIA Archer, AW (40}-Pertusaria knightiana MUll. Arg........................................... 4 Elix, JA; Streimann, H (41}-Parmeliaceae. .................................... .. ................ 5 ADDITIONAL LICHEN RECORDS FROM NEW ZEALAND Galloway, DJ; Knight, A; Johnson, PN; Hayward, BW (30)-Polycoccum galli genum .. ............................................................................................................... 8 ARTICLES Lumbsch, HT-Notes on some genera erroneously reported for Australia ........ 10 Elix, JA; McCaffery, LF-Three new tridepsides in the lichenPseudocyphellaria billardierei ................................................................................ .. ................ ..... 12 Trinkaus, U; Mayrhofer, H; Matzer, M-Rinodinagennarii (Physciaceae), a wide spread species in the temperate regions of the Southern Hemisphere ........ 15 Malcolm, WM; Vezda, A; McCarthy, PM; Kantvilas, G-Porina subapplanata, a new species from -
Delimitation of Neonectria and Cylindrocarpon (Nectriaceae, Hypocreales, Ascomycota) and Related Genera with Cylindrocarpon-Like Anamorphs
available online at www.studiesinmycology.org StudieS in Mycology 68: 57–78. 2011. doi:10.3114/sim.2011.68.03 Delimitation of Neonectria and Cylindrocarpon (Nectriaceae, Hypocreales, Ascomycota) and related genera with Cylindrocarpon-like anamorphs P. Chaverri1*, C. Salgado1, Y. Hirooka1, 2, A.Y. Rossman2 and G.J. Samuels2 1University of Maryland, Department of Plant Sciences and Landscape Architecture, 2112 Plant Sciences Building, College Park, Maryland 20742, USA; 2United States Department of Agriculture, Agriculture Research Service, Systematic Mycology and Microbiology Laboratory, Rm. 240, B-010A, 10300 Beltsville Avenue, Beltsville, Maryland 20705, USA *Correspondence: Priscila Chaverri, [email protected] Abstract: Neonectria is a cosmopolitan genus and it is, in part, defined by its link to the anamorph genusCylindrocarpon . Neonectria has been divided into informal groups on the basis of combined morphology of anamorph and teleomorph. Previously, Cylindrocarpon was divided into four groups defined by presence or absence of microconidia and chlamydospores. Molecular phylogenetic analyses have indicated that Neonectria sensu stricto and Cylindrocarpon sensu stricto are phylogenetically congeneric. In addition, morphological and molecular data accumulated over several years have indicated that Neonectria sensu lato and Cylindrocarpon sensu lato do not form a monophyletic group and that the respective informal groups may represent distinct genera. In the present work, a multilocus analysis (act, ITS, LSU, rpb1, tef1, tub) was applied to representatives of the informal groups to determine their level of phylogenetic support as a first step towards taxonomic revision of Neonectria sensu lato. Results show five distinct highly supported clades that correspond to some extent with the informal Neonectria and Cylindrocarpon groups that are here recognised as genera: (1) N.