The “F” from FAIR and NARCIS

Total Page:16

File Type:pdf, Size:1020Kb

The “F” from FAIR and NARCIS The “F” from FAIR and NARCIS Pathways to make your data Findable in a generic national cataloging system Cees H.J. Hof @CeesH_DANS 18 September 2018, Data Federation Hub meet-up, UMC Groningen dans.knaw.nl DANS is an institute of KNAW and NWO Short intro……. (Why am I here?) • At DANS: • Project acquisition • Liaison life sciences • European Open Science Cloud • Software sustainability • Background in Biology (taxonomy & systematics) • +10 years involved in development of Global Biodiversity Information System (GBIF) • FAIR data avant la lettre • Cataloguing biodiversity data • Developing and implementing the DarwinCore data standard • Community building www.gbif.org The data deluge…. Numbers of (easy) accessible publications and datasets only growing…… Launched 4 September 2018 To find your way through the publications & data forest…. Catalogues are finding tools …. NARCIS: catalogue of Dutch research information National Academic Research and Collaborations Information System NARCIS: origin and evolution 1992: Nederlandse Onderzoek Databank (NOD) 2003: Berlin Declaration Open Access 2003: Dare Programme with DAREnet and NARCIS 2007: NOD and DAREnet merged into NARCIS (KNAW Bureau) 2011: NARCIS as one of the technical core services of DANS - Ongoing integration of research information - Increasing number of linked repositories - Improved search and visualization facilities https://www.narcis.nl NARCIS harvests metadata from 43 repositories NARCIS: catalogue of Dutch research information Access to: • Publications • Datasets • Research • People • Organisations NARCIS: Access to almost 300.000 datasets Take care….. • DANS provides back- up to Dryad (currently not only Dutch data in NARCIS) • Classification is subjective • Range from spreadsheets to GigaBites NARCIS & FAIR data The FAIR Guiding Principles To be Findable: F1. (meta)data are assigned a globally unique and persistent identifier F2. data are described with rich metadata (related to Reusable…) F3. metadata clearly and explicitly include the identifier of the data it describes F4. (meta)data are registered or indexed in a searchable resource Source: Mark D. Wilkinson et al. (2016) The FAIR Guiding Principles for scientific data management and stewardship NARCIS & FAIR data The FAIR Guiding Principles To be Findable: F1. (meta)data are assigned a globally unique and persistent identifier F2. data are described with rich metadata (related to Reusable…) F3. metadata clearly and explicitly include the identifier of the data it describes F4. (meta)data are registered or indexed in a searchable resource FAIR NARCIS NARCIS developments - Not only to show data end-products, also providing an overview of dynamic datasets relevant to science: long term monitoring, cohort studies, research collections, etc. - Include richer and better metadata - Interlinking of data – publications – researchers – projects – funders - Cover all domains of science - NARCIS as a gateway to full text and data harvesting… The NARCIS holy triplet: Dublincore or DataCite Metadata standards Exchange protocol Identifiers OAI-PMH DOI Open Archives Initiative Handle Protocol for Metadata Harvesting Etc. Case study: “zorggegevens” RIVM Dublincore Title In the end: DataCite But… much richer (15 terms) Creator The ultimate (19 terms) because of the use of Subject Choice has to sub-properties. Description For example: Publisher be made….. Contributor Coverage 18: GeoLocation Date “open” fields versus 18.1: geoLocationPoint Type more structured 18.2: geoLocationBox Format 18.3: geoLocationPlace Identifier 18.4: geoLocationPolygon Source Language Relation Rights Case study: “zorggegevens” RIVM - There is no rule of law in the mapping process - Focus on the potential “searchers” of your data - Best practical means to start with…. - Agile process - Rethink your database structure and set-up - Consider the addition of “new” fields in your database to facilitate optimal findability and interoperability - Identifiers… is usually an issue - NARCIS can be fine tuned for your purpose Case study: “zorggegevens” RIVM Case study: “zorggegevens” RIVM NARCIS: other routes…. Harvesting from international aggregators NARCIS: other routes…. Harvesting from international aggregators IPT toolkit harvesting rich biodiversity data www.gbif.org OAI-PMH + Filter on Dutch data providers NARCIS Dutch Biodiversity data providers In NARCIS and further on…. Plans for the future… (in the life sciences) Try to get the major life science databases and aggregators in NARCIS - Working with BBMRI (Biobanks) - In touch with “Zorginstituut” - In touch with Ministry “VWS” - Talking to ZonMw - What about the FAIR Data Point (DTL) - Workshops “Pimp your Metadata” - Possibly deploy metadata supporting services like the inclusion of DarwinCore metadata and Taxonomic services - What you would like…… Thanks for your attention! Cees Hof, with the help of Elly Dijk & Chris Baars [email protected] @CeesH_DANS dans.knaw.nl DANS is an institute of KNAW en NWO.
Recommended publications
  • Confronting Antisemitism in Modern Media, the Legal and Political Worlds an End to Antisemitism!
    Confronting Antisemitism in Modern Media, the Legal and Political Worlds An End to Antisemitism! Edited by Armin Lange, Kerstin Mayerhofer, Dina Porat, and Lawrence H. Schiffman Volume 5 Confronting Antisemitism in Modern Media, the Legal and Political Worlds Edited by Armin Lange, Kerstin Mayerhofer, Dina Porat, and Lawrence H. Schiffman ISBN 978-3-11-058243-7 e-ISBN (PDF) 978-3-11-067196-4 e-ISBN (EPUB) 978-3-11-067203-9 DOI https://10.1515/9783110671964 This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. For details go to https://creativecommons.org/licenses/by-nc-nd/4.0/ Library of Congress Control Number: 2021931477 Bibliographic information published by the Deutsche Nationalbibliothek The Deutsche Nationalbibliothek lists this publication in the Deutsche Nationalbibliografie; detailed bibliographic data are available on the Internet at http://dnb.dnb.de. © 2021 Armin Lange, Kerstin Mayerhofer, Dina Porat, Lawrence H. Schiffman, published by Walter de Gruyter GmbH, Berlin/Boston The book is published with open access at www.degruyter.com Cover image: Illustration by Tayler Culligan (https://dribbble.com/taylerculligan). With friendly permission of Chicago Booth Review. Printing and binding: CPI books GmbH, Leck www.degruyter.com TableofContents Preface and Acknowledgements IX LisaJacobs, Armin Lange, and Kerstin Mayerhofer Confronting Antisemitism in Modern Media, the Legal and Political Worlds: Introduction 1 Confronting Antisemitism through Critical Reflection/Approaches
    [Show full text]
  • De Introductie Van Onze Cultuurplanten En Hun Begeleiders, Van Het Neolithicum Tot 1500A D
    tfb t^C~o3 De introductie van onze cultuurplanten en hun begeleiders, van het Neolithicum tot 1500A D A.C. Zeven (red.) met bijdragen van CC. Bakels H. van Haaster J.-P.Pal s A.C. Zeven Vereniging voor Landbouwgeschiedenis, Wageningen, 1997 REFERAAT A.C. Zeven (red.), C.C. Bakels, H. van Haaster &J.-P . Pals (1997).De introductie van onze cultuurplanten enhun begeleiders, vanhet Neolithicum tot 1500 AD. Wageningen, Vereniging voor Landbouwgeschiedenis. 107blz . Historisch overzicht van de introductie van cultuurgewassen in het gebied van het huidige Nederland. In het inleidende hoofdstuk geeft A.C. Zeven een overzicht van de factoren die introductie en eventueel weerverdwijne n van gewassen bepalen en van de naamgeving van gewassen. Vervolgens behandelt C.C. Bakels de cultuurgewassen van de Nederlandse Prehistorie, vanaf het Neolithicum (ca 5400v.C. )to t aan de komst van de Romeinen. De Romeinse tijd wordt behandeld door J.-P. Pais, de Middeleeuwen door H. van Haaster. Elk afzonderlijk hoofdstuk bevat een literatuuroverzicht. De publikatie als geheel wordt ontsloten door een index op botanisch- wetenschappelijke plantennamen. Trefwoorden: cultuurplanten, Nederland, Prehistorie, Romeinse tijd, Middeleeuwen, introductie, landbouw, tuinbouw ISBN 90-800522-3-X ©Vereniging voor Landbouwgeschiedenis, Wageningen, 1997 Inhoud biz. Woor d vooraf 5 1 Introductie van nieuwe plantensoorten: een inleiding (A.C. Zeven) 7 1.1 Inleiding 7 1.2 Introductie vanland - en tuinbouwgewassen 8 1.3 Klimaatwijzigingen 8 1.4 Naamgeving 8 1.5 Herkomstnamen 9 1.6 Verdwijnen van gewassen 10 1.7 Nieuwe gewassen 10 1.8 Indeling in perioden 10 1.9 Indelingva n het boek 11 Literatuur 12 2 De cultuurgewassen van de Nederlandse Prehistorie,540 0v.C-1 2 v.C.
    [Show full text]
  • Emergent Computing Joint ERCIM Actions: ‘Beyond the Horizon’ Anticipating Future and Emerging Information Society Technologies
    European Research Consortium for Informatics and Mathematics Number 64, January 2006 www.ercim.org Special: Emergent Computing Joint ERCIM Actions: ‘Beyond the Horizon’ Anticipating Future and Emerging Information Society Technologies European Scene: Routes to Open Access Publishing CONTENTS JOINT ERCIM ACTIONS THE EUROPEAN SCENE 4 Fourth ERCIM Soft Computing Workshop The Routes to Open Access by Petr Hajek, Institute of Computer Science, Academy of 16 Open Access: An Introduction Sciences / CRCIM, Czech Republic by Keith G Jeffery, Director IT, CCLRC and ERCIM president 4 Cor Baayen Award 2006 18 Publish or Perish — Self-Archive to Flourish: The Green Route to Open Access 5 Second ERCIM Workshop ‘Rapid Integration of Software by Stevan Harnad, University of Southampton, UK Engineering Techniques’ by Nicolas Guelfi, University of Luxembourg 19 The Golden Route to Open Access by Jan Velterop 5 Grid@Asia: European-Asian Cooperation Director of Open Access, Springer in Grid Research and Technology by Bruno Le Dantec , ERCIM Office 20 ERCIM Statement on Open Access 6 GFMICS 2005 — 10th International Workshop on Formal 21 Managing Licenses in an Open Access Community Methods for Industrial Critical Systems by Renato Iannella National ICT Australia by Mieke Massink and Tiziana Margaria 22 W3C at the Forefront of Open Access Beyond-The-Horizon Project by Rigo Wenning, W3C 7 Bits, Atoms and Genes Beyond the Horizon 23 Cream of Science by Dimitris Plexousakis, ICS-FORTH, Greece by Wouter Mettrop, CWI, The Netherlands 8 Thematic Group 1: Pervasive Computing and Communications SPECIAL THEME: by Alois Ferscha, University of Linz, Austria EMERGENT COMPUTING 24 Introduction to the Special Theme 9 Thematic Group 2: by Heather J.
    [Show full text]
  • Grey Literature in Library and Information Studies Dominic Farace, Joachim Schöpfel
    Grey Literature in Library and Information Studies Dominic Farace, Joachim Schöpfel To cite this version: Dominic Farace, Joachim Schöpfel. Grey Literature in Library and Information Studies. 2010, 9783598441493. hal-01981296 HAL Id: hal-01981296 https://hal.archives-ouvertes.fr/hal-01981296 Submitted on 14 Jan 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution - NonCommercial - NoDerivatives| 4.0 International License Grey Literature in Library and Information Studies Grey Literature in Library and Information Studies Edited by Dominic J. Farace and Joachim Schöpfel De Gruyter Saur An electronic version of this book is freely available, thanks to the support of libra- ries working with Knowledge Unlatched. KU is a collaborative initiative designed to make high quality books Open Access. More information about the initiative can be found at www.knowledgeunlatched.org An electronic version of this book is freely available, thanks to the support of libra- ries working with Knowledge Unlatched. KU is a collaborative initiative designed to make high quality books Open Access. More information about the initiative can be found at www.knowledgeunlatched.org ISBN 978-3-11-021808-4 e-ISBN (PDF) 978-3-11-021809-1 e-ISBN (EPUB) 978-3-11-021806-2 ISSN 0179-0986 e-ISSN 0179-3256 This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 License, as of February 23, 2017.
    [Show full text]
  • Notes on Operations
    104 LRTS 56(2) Notes on Operations Integration of a Research Management System and an OAI-PMH Compatible ETDs Repository at the University of Novi Sad, Republic of Serbia Lidija Ivanović, Dragan Ivanović, and Dušan Surla This paper discusses the extension of the Current Research Information System (CRIS) at the University of Novi Sad, Republic of Serbia, to incorporate elec- tronic theses and dissertations (ETDs). Data describing ETDs is entered using a web application that enables researchers to input their own data through a webpage without knowing the standards on which the system is based. The ETDs repository can exchange data with CRIS institutional repositories and Networked Digital Library of Theses and Dissertations members. In this way, the interna- tional visibility of theses and dissertations created at the University of Novi Sad is enhanced without duplicating data entry in various systems. This approach has been verified and tested on a dataset of theses and dissertations at the University of Novi Sad. ublic access to theses and dissertations via the Internet is important for the P development of a knowledge-based society. A knowledge-based society relies on the knowledge of its citizens to drive entrepreneurship, innovation, and vitality of that society’s economy. A knowledge-based society possesses a community of scholars, researchers, research networks, engineers, technicians, and businesses engaged in research and the production of high-technology goods and provision Lidija Ivanović ([email protected]. ac.rs) is a teaching assistant, Faculty of of services. It forms a national innovation and production system, which is inte- Education, University of Novi Sad, Som- grated into international networks of knowledge production.
    [Show full text]
  • Netherlands Country Report | SGI Sustainable Governance Indicators
    Netherlands report Robert Hoppe, Thomas Hoppe, Jaap Woldendorp, Nils C. Bandelow Netherlands report SGI 2011 | 2 Netherlands report Robert Hoppe, Thomas Hoppe, Jaap Woldendorp, Nils C. Bandelow Prof. Robert Hoppe, University of Twente Prof. Thomas Hoppe, University of Twente Dr. Jaap Woldendorp, VU University, Amsterdam Prof. Nils C. Bandelow, Technical University of Braunschweig Netherlands report SGI 2011 | 3 Executive Summary The nature of Dutch democracy, once considered a highly stable product of cooperation, compromise and consensus-seeking practices across socioeconomic and sociocultural lines, has changed. Whereas the accessibility and levels (not forms) of participation have changed little, autocratically led protest parties have won ground and in the polls draw support from a stable 15% – 17% of the electorate. Corruption prevention in politics, especially regarding party finances, appears to fall under the bar of international standards. Political rhetoric has grown increasingly polarized (or politicized) as the political middle is waning and extreme positions on either side are on the rise. The Dutch media landscape remains highly pluralistic, although there are some concerns about the growing concentration of media ownership, a situation aggravated by the present financial economic crisis, rapid commercialization, and international ownership of national media outlets. In legal arrangements, citizens‟ right to privacy is subject to pressures from the information revolution and the massive use of information technology (IT) in all kinds of policy fields, primarily relating to internal and external security. In addition, some conspicuous miscarriages of justice have spawned a public debate on the quality of the justice system, including the need for a special court charged with handling mistrials.
    [Show full text]
  • De Introductie Van Onze Cultuurplanten En Hun Begeleiders
    UvA-DARE (Digital Academic Repository) Archeobotanica uit 's-Hertogenbosch. Milieuomstandigheden, bewoningsgeschiedenis en economische ontwikkelingen in en rond een (post)middeleeuwse stad van Haaster, H. Publication date 2003 Link to publication Citation for published version (APA): van Haaster, H. (2003). Archeobotanica uit 's-Hertogenbosch. Milieuomstandigheden, bewoningsgeschiedenis en economische ontwikkelingen in en rond een (post)middeleeuwse stad. in eigen beheer. General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:06 Oct 2021 Dee introductie van onze cultuurplanten en hun begeleiders, vann het Neolithicum tot 1500 AD A.C.. Zeven (red.) mett bijdragen van CC.. Bakels H.. van Haaster J.-P.. Pais A.C.. Zeven Verenigingg voor Landbouwgeschiedenis, Wageningen, 1997 44 De introductie van cultuurgewassen in de Nederlanden tijdenss de Middeleeuwen H.
    [Show full text]
  • Interdisciplinarity Between Humanities and Science and Science
    & Hermans (eds) & Hermans Kootker Kluiving, INTERDISCIPLINARITY BETWEEN HUMANITIES INTERDISCIPLINARITY BETWEEN HUMANITIES AND SCIENCE AND HUMANITIES BETWEEN INTERDISCIPLINARITY AND SCIENCE Henk Kars was appointed as first Chair of Archaeometry in The Netherlands in 1994. From 2002 he was full time professor at the Vrije Universiteit Amsterdam, interim Director of CLUE, and founder and Managing Director of the Institute for Geo- and Bioarchaeology. This festschrift volume incorporates original publications in the field straddling the Sciences and Humanities produced by various former PhD-students, post-docs and colleagues. Landscape archaeology is described in the first cultural landscapes of Europe as a mysterious outcome, while the historical record of surface water flow of the central Netherlands is reviewed. The south-western Netherlands are historically analysed since military inundations during the Eighty Year’s War. The palaeolandscapes of the eastern Netherlands are reconstructed to locate the origins of the river Linge. The long time scale is considered in a 220.000 year overview of landscape development and habitation history in Flevoland. Bioarchaeology is represented in a review of the current state of isotope research in The Netherlands and a correlation between bio- and geochemistry meets an analysis of organic residues in copper corrosion products. Archaeometry reveals the colour of Dutch archaeological textures. The relevance of a quartzite Neolithic axe found near to Huizen, The Netherlands is described. INTERDISCIPLINARITY BETWEEN CLUES is an international scientific series covering research in the field of culture, history and heritage which have been written by, or were performed under the supervision of members of the research HUMANITIES AND SCIENCE institute CLUE+.
    [Show full text]
  • National Report of the Netherlands
    UNEP/CMS/Inf.10.12.59 Convention on the Conservation of Migratory Species of Wild Animals FORMAT FOR NATIONAL REPORT OF PARTIES ON THE IMPLEMENTATION OF THE CONVENTION ON THE CONSERVATION OF MIGRATORY SPECIES OF WILD ANIMALS Reporting format agreed by the Standing Committee at its 32nd Meeting (Bonn, November 2007) for mandatory use by Parties, for reports submitted to the Tenth Meeting of the Conference of the Parties (COP10) (Norway, 2011). The questions below combine elements of Resolution 4.1 (Party Reports) adopted by the Fourth Meeting of the Conference of the Parties (Nairobi, June 1994) and Resolution 6.4 (Strategic Plan for the Convention on Migratory Species 2000-2005), adopted by the Sixth Meeting of the Conference of the Parties (Cape Town, November 1999), the COP8 Strategic Plan 2006-2011 and Resolution 8.24 adopted by the Conference of the Parties (Nairobi 2005), as well as commitments arising from other operational Resolutions and Recommendations of the Conference of the Parties. COP Resolution 9.4 adopted at Rome called upon the Secretariats and Parties of CMS Agreements to collaborate in the implementation and harmonization of online reporting implementation. If the development of an online reporting system advances sufficiently, Parties may have the option of reporting in this manner. There are however no guarantees at this stage that this will be the case. Parties are encouraged to respond to all questions. Parties are also requested to provide comprehensive answers, including, where appropriate, a summary of activities, information on factors limiting action and details of any assistance required. This document has been designed with semi-automated text-form fields.
    [Show full text]
  • Grey Foundations in Information Landscape NINTH INTERNATIONAL CONFERENCE on GREY LITERATURE
    Grey Foundations in Information Landscape NINTH INTERNATIONAL CONFERENCE ON GREY LITERATURE Conference Host House of the Province, Antwerp, Belgium, 10 -11 December 2007 Conference Proceedings Department of Economy, Science and Innovation, Flemish Government Belgium ISSN 1386-2316 Conference Sponsors EBSCO GESIS INIST-CNRS NYAM OPOCE Information Services German Social Science Institute for Scientific & New York Academy Office for Official Publications United States Infrastructure Services Technical Information of Medicine of the European Communities Germany France United States Luxembourg Program Committee EWI Department of Economy, Science and Innovation, Flemish Government Belgium CNR National Research Council Italy euroCRIS Current Research Information Systems Norway GESIS German Social Science Infrastructure Services Germany GreyNet Grey Literature Network Service Netherlands INIST-CNRS Institute for Scientific and Technical Information France OSTI-DOE Office of Scientific and Technical Information USA UCI University of California, Irvine USA Program and Conference Bureau Javastraat 194-HS, 1095 CP Amsterdam, Netherlands TextRelease www.textrelease.com ŀ [email protected] T/F +31 (0) 20-331.2420 CIP GL9 Conference Proceedings Ninth International Conference on Grey Literature : Grey Foundations in Information Landscape, 10-11 December 2007, House of the Province, Antwerp, Belgium / ed. by Dominic J. Farace and Jerry Frantzen ; GreyNet, Grey Literature Network Service. - Amsterdam : TextRelease, February 2008. – 153 p. ; 30 cm. – Author Index. – (GL-conference series, ISSN 1385-2316 ; No. 9) INIST-CNRS and NYAM are corporate authors and associate members of GreyNet. These conference proceedings contain the full text of over twenty papers presented during the two days of Plenary, Panel, and Poster Sessions. The papers appear in the same order as the conference program.
    [Show full text]
  • Annual Report 2018 Report Radboud University 2
    Annual report 2018 www.ru.nl/annual report radboud university 2 Preface Our students gave Radboud University a score of 8.0 in 2018. Even though that is nothing new to us — this has also been the case in previous years — it is once again an important achievement on the part of our staff members. Students and staff with different backgrounds and hundreds of different nationalities motivate and inspire each other across the boundaries of academic disciplines. In turn, new insights are developed that regularly lead to new discoveries and contributions to the social issues of today and the future. The quality of our research has been recognised in various ways, including a successful Vidi grant round with 16 grants awarded: the best result Radboud has ever achieved. 2018 was dedicated to the 95-year anniversary of Radboud University. During Radboud Kids, one of the many different anniversary activities, 95 professors hopped on their bicycles in full cap and gown and headed to various primary schools in Nijmegen. Together, they introduced 2.433 children to the world of science. Hopefully, this aroused their interest in academics and we will see them later in the seats of our lecture halls. This annual report is an account of the operational and financial activities at the university in 2018. It enables us to take a good look at our past, while also laying a foundation for the knowledge of the future. Daniël Wigboldus – President Wilma de Koning – Vice President Han van Krieken – Rector Magnificus www.ru.nl/annual report radboud university 3
    [Show full text]
  • Description of Work
    THEME [CIP-ICT-PSP.2012.2.1] [Europeana and creativity] Grant agreement for: CIP-Best Practice Network Annex I - "Description of Work" Project acronym: eCloud Project full title: " Europeana Cloud: Unlocking Europe’s Research via The Cloud " Grant agreement no: 325091 Version date: 2015-02-17 Table of Contents Part A A.1 Project summary ......................................................................................................................................3 A.2 List of beneficiaries ..................................................................................................................................4 A.3 Overall budget breakdown for the project ............................................................................................... 6 Workplan Tables WT1 List of work packages ............................................................................................................................1 WT2 List of deliverables .................................................................................................................................2 WT3 Work package descriptions ................................................................................................................... 6 Work package 1......................................................................................................................................6 Work package 2....................................................................................................................................11 Work package
    [Show full text]