73 Screening for Root-Knot Nematode Response In
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Molecular Identification of Fungi
Molecular Identification of Fungi Youssuf Gherbawy l Kerstin Voigt Editors Molecular Identification of Fungi Editors Prof. Dr. Youssuf Gherbawy Dr. Kerstin Voigt South Valley University University of Jena Faculty of Science School of Biology and Pharmacy Department of Botany Institute of Microbiology 83523 Qena, Egypt Neugasse 25 [email protected] 07743 Jena, Germany [email protected] ISBN 978-3-642-05041-1 e-ISBN 978-3-642-05042-8 DOI 10.1007/978-3-642-05042-8 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2009938949 # Springer-Verlag Berlin Heidelberg 2010 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilm or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Cover design: WMXDesign GmbH, Heidelberg, Germany, kindly supported by ‘leopardy.com’ Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Dedicated to Prof. Lajos Ferenczy (1930–2004) microbiologist, mycologist and member of the Hungarian Academy of Sciences, one of the most outstanding Hungarian biologists of the twentieth century Preface Fungi comprise a vast variety of microorganisms and are numerically among the most abundant eukaryotes on Earth’s biosphere. -
Ecological Variability and Rule-Making Processes for Forest Management 1145 Different Rules And, Consequently, Institutions for Forests Management
International Journal of the Commons Vol. 10, no 2 2016, pp. 1144–1171 Publisher: Uopen Journals URL:http://www.thecommonsjournal.org DOI: 10.18352/ijc.672 Copyright: content is licensed under a Creative Commons Attribution 3.0 License ISSN: 1875-0281 Ecological variability and rule-making processes for forest management institutions: a social-ecological case study in the Jalisco coast, Mexico Sofía Monroy-Sais Instituto de Investigaciones en Ecosistemas y Sustentabilidad (IIES), Universidad Nacional Autónoma de México, México [email protected] Alicia Castillo Instituto de Investigaciones en Ecosistemas y Sustentabilidad (IIES), Universidad Nacional Autónoma de México, México [email protected] Eduardo García-Frapolli Instituto de Investigaciones en Ecosistemas y Sustentabilidad (IIES), Universidad Nacional Autónoma de México, México [email protected] Guillermo Ibarra-Manríquez Instituto de Investigaciones en Ecosistemas y Sustentabilidad (IIES), Universidad Nacional Autónoma de México, México [email protected] Abstract: Analysis of social-ecological systems is becoming increasingly used since the framework provides a valuable set of variables for understanding rela- tionships between people and ecosystems. This interaction focuses on the use and management of natural resources that, in many cases, are common-pool resources. In Mexico, common-pool resources have long been explored since at least 60% of the forested lands in the country are held under the legal figure of ‘ejidos’ and indigenous communities, which aimed at driving the collective use of lands and resources. However, few studies incorporate ecological processes for an integrated understanding of social-ecological systems. In this study, we seek to understand how ecological variability influences the creation and functioning of Ecological variability and rule-making processes for forest management 1145 different rules and, consequently, institutions for forests management. -
In Vitro Organogenesis and Plant Regeneration from Leaves of Solanum Candidum Lindl., S
In vitro organogenesis and plant regeneration from leaves of Solanum candidum Lindl., S. quitoense Lam. (naranjilla) and S. sessiliflorum Dunal By: ROSE C. HENDRIX1, RICHARD E. LITZ1* and BRUCE K. KIRCHOFF2 Hendrix, R. C., R. E. Litz and B. K. Kirchoff. 1987. In vitro organogenesis and plant regeneration from leaves of Solanum candidum Lindl., S. quitoense Lam. (Naranjilla) and S. sessiliflorum Dunal. Plant Cell, Tissue and Organ Culture 11: 67- 73. Made available courtesy of Springer Verlag. The original publication is available at www.springerlink.com ***Note: Figures may be missing from this format of the document Abstract: Adventitious shoots and roots were regenerated from leaf segments of 3 Solanum species: S. candidum Lindl., S. quitoense Lam. and S. sessiliflorum Dunal. Leaf explants differentiated shoots on modified MS medium supplemented with 23-163 μm kinetin and 0-5.7 μm indoleacetic acid (IAA). Excised shoots were induced to form roots by transfer to media with benzyladenine (BA) and naphthaleneacetic acid (NAA) at 0.09 and 0.11/2 μM respectively for S. qultoense and 0.01 μm NAA for S. candidum and S. sessiliflorum. Adventitious roots were produced directly from leaf explants with 0-140 μm kinetin and 0-5.7μm IAA in combination. Rooted plants were successfully established in the greenhouse. Key words: naranjilla, organogenesis, Solanum candidum, Solanum qultoense, Solanum sessiliforum, tissue culture Article: INTRODUCTION The naranjilla (Solanum quitoense Lam.) is a large, lignescent perennial that is cultivated for the juice of its fruit in Andean South America and in some Central American countries [13]. Its cultivation is severely limited by climatic requirements and susceptibility to diseases and pests, particularly the rootknot nematode [6]. -
Plant Biotechnol. 36: 19.0317A (2019) [Adv.Pub.]
Advance Publication by J-STAGE Plant BiotechnologyPlant 36,Biotechnology 1–7 (2019) http://www.jstage.jst.go.jp DOI: 10.5511/plantbiotechnology.19.0317a Original Paper Micropropagation of Solanum quitoense var. quitoense by apical bud, petiole and hypocotyl culture Bernardo Gutiérrez1, María Mercedes Cobo1, Miguel Orellana1, Joely Vega1, Venancio Arahana1, Viviana Jaramillo1,2, María de Lourdes Torres1,* 1 Universidad San Francisco de Quito USFQ, Laboratorio de Biotecnología Vegetal, Colegio de Ciencias Biológicas y Ambientales COCIBA, Cumbayá-Ecuador; 2 Wageningen UR Plant Breeding, Wageningen University, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands * E-mail: [email protected] Tel: +593-2-297-1746 Fax: +593-2-2890-070 Received November 21, 2018; accepted March 17, 2019 (Edited by Y. Hoshino) Abstract The development of in vitro propagation methods can improve the current commercial use and conservation of plants like naranjilla (Solanum quitoense), a distinctive Andean crop and key emerging agricultural product. In the present study, we report in vitro culture protocols for naranjilla apical buds, hypocotyls and petioles. In apical bud culture, MS medium supplemented with 0.10 mg l−1 1-naphtaleneacetic acid (NAA) produced longer plantlets with greater number of leaves. Hypocotyl culture yielded higher number of shoots when using older explants in MS medium supplemented with different combinations of NAA, 6-benzylaminopurine (BAP) and gibberellic acid (GA3). Petiole culture produced a significantly higher number of shoots per explant, with more abundant and bigger leaves, when using MS medium −1 −1 −1 supplemented with 0.02 mg l NAA, 4.50 mg l BAP and 1.00 mg l GA3. -
Revision of Solanum Section Cyphomandropsis (Solanaceae) Author(S): Lynn Bohs Source: Systematic Botany Monographs, Vol
Revision of Solanum Section Cyphomandropsis (Solanaceae) Author(s): Lynn Bohs Source: Systematic Botany Monographs, Vol. 61, Revision of Solanum Section Cyphomandropsis ( Solanaceae) (Aug. 30, 2001), pp. 1-85 Published by: American Society of Plant Taxonomists Stable URL: http://www.jstor.org/stable/25027891 Accessed: 02-03-2016 19:03 UTC Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at http://www.jstor.org/page/ info/about/policies/terms.jsp JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. American Society of Plant Taxonomists is collaborating with JSTOR to digitize, preserve and extend access to Systematic Botany Monographs. http://www.jstor.org This content downloaded from 169.237.45.23 on Wed, 02 Mar 2016 19:03:20 UTC All use subject to JSTOR Terms and Conditions REVISION OF SOLANUM SECTION CYPHOMANDROPSIS (SOLANACEAE) Lynn Bohs Department of Biology University of Utah Salt Lake City, Utah 84112 ABSTRACT. Solanum section Cyphomandropsis (Solanaceae) includes 13 species native to South Amer ica. Plants of this section are woody shrubs to small trees that lack spines, are glabrous to pubescent with un branched or dendritically branched trichomes, and have tapered anthers with small terminal pores. Section Cyphomandropsis is closely related to Solanum sect. Pachyphylla (formerly genus Cyphomandra), from which it differs by lacking discrete, enlarged connectives on the abaxial anther surfaces. -
Missing the Boat to Ancient America . . . Just Plain Missing the Boat
Review of Books on the Book of Mormon 1989–2011 Volume 17 Number 1 Article 5 1-1-2005 Missing the Boat to Ancient America . Just Plain Missing the Boat Ryan Parr Follow this and additional works at: https://scholarsarchive.byu.edu/msr BYU ScholarsArchive Citation Parr, Ryan (2005) "Missing the Boat to Ancient America . Just Plain Missing the Boat," Review of Books on the Book of Mormon 1989–2011: Vol. 17 : No. 1 , Article 5. Available at: https://scholarsarchive.byu.edu/msr/vol17/iss1/5 This Book of Mormon is brought to you for free and open access by the Journals at BYU ScholarsArchive. It has been accepted for inclusion in Review of Books on the Book of Mormon 1989–2011 by an authorized editor of BYU ScholarsArchive. For more information, please contact [email protected], [email protected]. Title Missing the Boat to Ancient America . Just Plain Missing the Boat Author(s) Ryan Parr Reference FARMS Review 17/1 (2005): 83–106. ISSN 1550-3194 (print), 2156-8049 (online) Abstract Review of Losing a Lost Tribe: Native Americans, DNA, and the Mormon Church, by Simon G. Southerton. Copyright © 005 FARMS. May not be copied or reproduced without permission. Missing the Boat to Ancient America . Just Plain Missing the Boat Ryan Parr Ryan Parr has a PhD in biological anthropology from the University of Utah and is cur- rently vice president of Research and Development at Genesis Genomics, a Canadian biotechnical company exploring the use of mitochondrial DNA as a “biosensor” for the early detection of prostate and breast cancer. -
Transcriptional, Microscopic and Macroscopic Investigations Into Monogenic and Polygenic Interactions of Tomato and Powdery Mildew
Transcriptional, microscopic and macroscopic investigations into monogenic and polygenic interactions of tomato and powdery mildew Chengwei Li Promotor: Prof. dr. R. G. F. Visser Hoogleraar in de Plantenveredeling, Wageningen Universiteit Co-promotor: Dr. ir. A. B. Bonnema Onderzoeker, Laboratorium voor Plantenveredeling Promotiecommissie: Prof. dr. ir. P.J.G.M. de Wit, Wageningen Universiteit Prof. dr. T. Bisseling, Wageningen Universiteit Prof. dr. X. Zhang, Chinese Academy of Agricultural Sciences Dr. G. vanden Ackervecken, Universiteit van Utrecht Dit onderzoek is uitgevoerd binnen de onderzoeksschool Experimental Plant Sciences en de onderzoekschool van de Chinese Academy of Agricultural Sciences Transcriptional, microscopic and macroscopic investigations into monogenic and polygenic interactions of tomato and powdery mildew Chengwei Li Proefschrift ter verkrijging van de graad van doctor op gezag van de rector magnificus van Wageningen Universiteit, Prof. dr. M. J. Kropff, in het openbaar te verdedigen op maandag 3 oktober 2005 des middags om half twee in de Aula CIP-DATA Koninklijke bibliotheek, Den Haag Li C. Transcriptional, microscopic and macroscopic investigations into monogenic and polygenic interactions of tomato and powdery mildew Thesis Wageningen University (2005), the Netherlands. - with references- with summary in English, Chinese and Dutch. Laboratory of Plant Breeding, P.O. Box 386, 6700 AJ, Wageningen, NL ISBN : 90-8504-307-7 Keywords: basal defense, cDNA-AFLP, differentially expressed transcript fragment (DE-TDF), -
Solanum Melongena)-Related Germplasm: Morphological and AFLP Data Contribute to Phylogenetic Interpretations and Germplasm Utilization
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by MPG.PuRe Theor Appl Genet (2004) 108:197–208 DOI 10.1007/s00122-003-1439-1 ORIGINAL PAPER A. Furini · J. Wunder Analysis of eggplant (Solanum melongena)-related germplasm: morphological and AFLP data contribute to phylogenetic interpretations and germplasm utilization Received: 13 February 2003 / Accepted: 12 August 2003 / Published online: 16 October 2003 Springer-Verlag 2003 Abstract A total of 94 Solanum accessions, including Introduction eggplants and related species, were morphologically characterized based on greenhouse observations, and Several economically important species such as eggplant, molecularly analysed by the AFLP technique. Morpho- potato, tomato, tobacco and pepper belong to the Sola- logical parameters were helpful in assessing similarities naceae family. At the beginning of the 20th century, G. or differences among accessions, and molecular data were Bitter, amongst others studied the Solanaceae, focusing used to support morphological conclusions. A dendro- on the largest genus Solanum (Daunay et al. 2001). Other gram was computed based on the Dice genetic distances taxonomists have also contributed to the characterization using the neighbour-joining method. The analysis was of this genus, considering particular characters of taxo- efficient in the assignment of a species name for eight out nomic significance (e.g. Correll 1962; Seithe and Ander- of nine accessions that were not previously classified, and son 1982; Whalen 1984; Bohs 1999). The vast amount of revealed that 14 further accessions were misnamed in the available literature has, however, led to a considerable collection originally received. The results indicate that the confusion surrounding the genus, for which 1,000 to taxonomy of Solanum sections and subgenera including 1,400 Solanum species have been associated to more than several species should be reconsidered. -
Note by Scott Mori (14 August 2014): Only General Information and Information Specifically About the Cannon Ball Tree (Couroupit
Note by Scott Mori (14 August 2014): only general information and information specifically about the cannon ball tree (Couroupita guianensis) have been extracted from the online article Scientific Evidence for Pre-Columbian Transoceanic Voyages to and from the Americas John L. Sorenson1 and Carl L. Johannessen2 Introduction This paper is an expanded version of a presentation given at a conference, "Contact and Exchange in the Ancient World," held at the University of Pennsylvania, Philadelphia, May 5, 2001. The conference was organized by Victor H. Mair of the Department of Asian and Middle Eastern Studies at the University of Pennsylvania. He is also editor of the volume of papers from that conference in press at the University of Hawaii Press in 2004. Since our initial paper was submitted for inclusion in that volume, we have made further discoveries. The present book incorporates the new materials, constituting a revision and extension of the original paper. Because much of the literature that enters into our argument in the extended paper is interpreted here in ways other than biologists conventionally do, for readers' convenience we give in the appendix précis of our reference materials on each species discussed. Selected illustrations and a bibliography for both the text proper and the appendix follow. Support for the preparation and presentation of the original paper was provided by the Institute for the Study and Preservation of Ancient Religious Texts, at Brigham Young University, and the Center for Ancient Studies of the University of Pennsylvania. We express gratitude to those organizations, but, of course, we authors alone are responsible for the views expressed and for any errors. -
Supplementary Information
Supplementary information Susy Echeverr´ıa-Londono˜ *, Tiina Sarkinen¨ 1, Isabel S Fenton1, Sandra Knapp1, and Andy Purvis1 *[email protected] Extended methods for correcting for non-random taxon sampling We used the maximum clade credibility of the (1) phylogeny as the “backbone” to define the general relationships among the main sections of the genus. Monophyletic constraints were used only for well-supported nodes (i.e., posterior probability > 0.95%, see Table1). Clades with poorly-supported nodes were left unconstrained (i.e., the Torva, African Non-spiny and Erythrotrichum clades). One of the nodes in the (1) phylogeny within the Dulcamaroid clade had negative branch lengths; this can occur when a clade is poorly sampled across the posterior distribution (i.e., when there is a low support of a direct ancestor-descendant relationship). Since setting negative branch lengths to zero would create a non-ultrametric tree, we decided to drop all the tips from this weakly supported node from the backbone and include them in the PASTIS analysis as unconstrained. We then assigned each accepted name of Solanum to one of the clades or sections which are shown in Table1, following the taxonomic treatment of Solanum species in Solanaceae Source and expert opinion (S. Knapp, pers. comm.). For each clade or subclade, PASTIS creates an output file in a nexus format, which contains the full set of tree constraints ready to be executed in MrBayes. Therefore, posterior distributions of phylogenies for each clade were then inferred in MrBayes 3.2.3 (2) using a relaxed clock model (independent branch rates – igr prior), with the default (exponential) prior on the distribution of branching rates. -
Redalyc.Listado Anotado De Solanum L. (Solanaceae) En El Perú
Revista Peruana de Biología ISSN: 1561-0837 [email protected] Universidad Nacional Mayor de San Marcos Perú Särkinen, Tiina; Baden, Maria; Gonzáles, Paúl; Cueva, Marco; Giacomin, Leandro L.; Spooner, David M.; Simon, Reinhard; Juárez, Henry; Nina, Pamela; Molina, Johanny; Knapp, Sandra Listado anotado de Solanum L. (Solanaceae) en el Perú Revista Peruana de Biología, vol. 22, núm. 1, abril, 2015, pp. 3-62 Universidad Nacional Mayor de San Marcos Lima, Perú Disponible en: http://www.redalyc.org/articulo.oa?id=195038591001 Cómo citar el artículo Número completo Sistema de Información Científica Más información del artículo Red de Revistas Científicas de América Latina, el Caribe, España y Portugal Página de la revista en redalyc.org Proyecto académico sin fines de lucro, desarrollado bajo la iniciativa de acceso abierto Revista peruana de biología 22(1): 003 - 062 (2015) ISSN-L 1561-0837 Listado anotado de SOLANUM L. (Solanaceae) en el Perú doi: http://dx.doi.org/10.15381/rpb.v22i1.11121 Facultad de Ciencias Biológicas UNMSM TRABAJOS ORIGINALES Listado anotado de Solanum L. (Solanaceae) en el Perú Annotated checklist of Solanum L. (Solanaceae) for Peru Tiina Särkinen1, Maria Baden2, Paúl Gonzáles3, Marco Cueva4, Leandro L. Giacomin5,6,7, David M. Spooner8, Reinhard Simon9, Henry Juárez9, Pamela Nina3, Johanny Molina3 and Sandra Knapp10 1 Royal Botanic Garden Edinburgh, 20A Inverleith Row, EH3 5LR Edinburgh, United Kingdom. 2 Department of Biology, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark. 3 Laboratorio de Florística, Departamento de Dicotiledóneas, Museo de Historia Natural - Universidad Nacional Mayor de San Marcos, Avenida Arenales 1256, Apartado Postal 14-0434, Lima, Perú. -
Comparative Evidence for the Correlated Evolution of Polyploidy and Self-Compatibility in Solanaceae
ORIGINAL ARTICLE doi:10.1111/j.1558-5646.2010.01099.x COMPARATIVE EVIDENCE FOR THE CORRELATED EVOLUTION OF POLYPLOIDY AND SELF-COMPATIBILITY IN SOLANACEAE Kelly Robertson,1,2 Emma E. Goldberg,1,3 and Boris Igic´1,4 1Department of Biological Sciences, 840 West Taylor St., M/C 067, University of Illinois at Chicago, Chicago, Illinois 60607 2E-mail: [email protected] 3E-mail: [email protected] 4E-mail: [email protected] Received March 4, 2010 Accepted June 18, 2010 Breakdown of self-incompatibility occurs repeatedly in flowering plants with important evolutionary consequences. In plant families in which self-incompatibility is mediated by S-RNases, previous evidence suggests that polyploidy may often directly cause self-compatibility through the formation of diploid pollen grains. We use three approaches to examine relationships between self- incompatibility and ploidy. First, we test whether evolution of self-compatibility and polyploidy is correlated in the nightshade family (Solanaceae), and find the expected close association between polyploidy and self-compatibility. Second, we compare the rate of breakdown of self-incompatibility in the absence of polyploidy against the rate of breakdown that arises as a byproduct of polyploidization, and we find the former to be greater. Third, we apply a novel extension to these methods to show that the relative magnitudes of the macroevolutionary pathways leading to self-compatible polyploids are time dependent. Over small time intervals, the direct pathway from self-incompatible diploids is dominant, whereas the pathway through self-compatible diploids prevails over longer time scales. This pathway analysis is broadly applicable to models of character evolution in which sequential combinations of rates are compared.