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Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School November 2017 Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E. Hepner University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, Ecology and Evolutionary Biology Commons, and the Other Oceanography and Atmospheric Sciences and Meteorology Commons Scholar Commons Citation Hepner, Megan E., "Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary" (2017). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/7408 This Thesis is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary by Megan E. Hepner A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science Marine Science with a concentration in Marine Resource Assessment College of Marine Science University of South Florida Major Professor: Frank Muller-Karger, Ph.D. Christopher Stallings, Ph.D. Steve Gittings, Ph.D. Date of Approval: October 31st, 2017 Keywords: Species richness, biodiversity, functional diversity, species traits Copyright © 2017, Megan E. Hepner ACKNOWLEDGMENTS I am indebted to my major advisor, Dr. Frank Muller-Karger, who provided opportunities for me to strengthen my skills as a researcher on research cruises, dive surveys, and in the laboratory, and as a communicator through oral and presentations at conferences, and for encouraging my participation as a full team member in various meetings of the Marine Biodiversity Observation Network (MBON) and other science meetings. -
A Practical Handbook for Determining the Ages of Gulf of Mexico And
A Practical Handbook for Determining the Ages of Gulf of Mexico and Atlantic Coast Fishes THIRD EDITION GSMFC No. 300 NOVEMBER 2020 i Gulf States Marine Fisheries Commission Commissioners and Proxies ALABAMA Senator R.L. “Bret” Allain, II Chris Blankenship, Commissioner State Senator District 21 Alabama Department of Conservation Franklin, Louisiana and Natural Resources John Roussel Montgomery, Alabama Zachary, Louisiana Representative Chris Pringle Mobile, Alabama MISSISSIPPI Chris Nelson Joe Spraggins, Executive Director Bon Secour Fisheries, Inc. Mississippi Department of Marine Bon Secour, Alabama Resources Biloxi, Mississippi FLORIDA Read Hendon Eric Sutton, Executive Director USM/Gulf Coast Research Laboratory Florida Fish and Wildlife Ocean Springs, Mississippi Conservation Commission Tallahassee, Florida TEXAS Representative Jay Trumbull Carter Smith, Executive Director Tallahassee, Florida Texas Parks and Wildlife Department Austin, Texas LOUISIANA Doug Boyd Jack Montoucet, Secretary Boerne, Texas Louisiana Department of Wildlife and Fisheries Baton Rouge, Louisiana GSMFC Staff ASMFC Staff Mr. David M. Donaldson Mr. Bob Beal Executive Director Executive Director Mr. Steven J. VanderKooy Mr. Jeffrey Kipp IJF Program Coordinator Stock Assessment Scientist Ms. Debora McIntyre Dr. Kristen Anstead IJF Staff Assistant Fisheries Scientist ii A Practical Handbook for Determining the Ages of Gulf of Mexico and Atlantic Coast Fishes Third Edition Edited by Steve VanderKooy Jessica Carroll Scott Elzey Jessica Gilmore Jeffrey Kipp Gulf States Marine Fisheries Commission 2404 Government St Ocean Springs, MS 39564 and Atlantic States Marine Fisheries Commission 1050 N. Highland Street Suite 200 A-N Arlington, VA 22201 Publication Number 300 November 2020 A publication of the Gulf States Marine Fisheries Commission pursuant to National Oceanic and Atmospheric Administration Award Number NA15NMF4070076 and NA15NMF4720399. -
An Invitation to Monitor Georgia's Coastal Wetlands
An Invitation to Monitor Georgia’s Coastal Wetlands www.shellfish.uga.edu By Mary Sweeney-Reeves, Dr. Alan Power, & Ellie Covington First Printing 2003, Second Printing 2006, Copyright University of Georgia “This book was prepared by Mary Sweeney-Reeves, Dr. Alan Power, and Ellie Covington under an award from the Office of Ocean and Coastal Resource Management, National Oceanic and Atmospheric Administration. The statements, findings, conclusions, and recommendations are those of the authors and do not necessarily reflect the views of OCRM and NOAA.” 2 Acknowledgements Funding for the development of the Coastal Georgia Adopt-A-Wetland Program was provided by a NOAA Coastal Incentive Grant, awarded under the Georgia Department of Natural Resources Coastal Zone Management Program (UGA Grant # 27 31 RE 337130). The Coastal Georgia Adopt-A-Wetland Program owes much of its success to the support, experience, and contributions of the following individuals: Dr. Randal Walker, Marie Scoggins, Dodie Thompson, Edith Schmidt, John Crawford, Dr. Mare Timmons, Marcy Mitchell, Pete Schlein, Sue Finkle, Jenny Makosky, Natasha Wampler, Molly Russell, Rebecca Green, and Jeanette Henderson (University of Georgia Marine Extension Service); Courtney Power (Chatham County Savannah Metropolitan Planning Commission); Dr. Joe Richardson (Savannah State University); Dr. Chandra Franklin (Savannah State University); Dr. Dionne Hoskins (NOAA); Dr. Charles Belin (Armstrong Atlantic University); Dr. Merryl Alber (University of Georgia); (Dr. Mac Rawson (Georgia Sea Grant College Program); Harold Harbert, Kim Morris-Zarneke, and Michele Droszcz (Georgia Adopt-A-Stream); Dorset Hurley and Aimee Gaddis (Sapelo Island National Estuarine Research Reserve); Dr. Charra Sweeney-Reeves (All About Pets); Captain Judy Helmey (Miss Judy Charters); Jan Mackinnon and Jill Huntington (Georgia Department of Natural Resources). -
Integration Drives Rapid Phenotypic Evolution in Flatfishes
Integration drives rapid phenotypic evolution in flatfishes Kory M. Evansa,1, Olivier Larouchea, Sara-Jane Watsonb, Stacy Farinac, María Laura Habeggerd, and Matt Friedmane,f aDepartment of Biosciences, Rice University, Houston, TX 77005; bDepartment of Biology, New Mexico Institute of Mining and Technology, Socorro, NM 87801; cDepartment of Biology, Howard University, Washington, DC 20059; dDepartment of Biology, University of North Florida, Jacksonville, FL 32224; eDepartment of Paleontology, University of Michigan, Ann Arbor, MI 48109; and fDepartment of Earth and Environmental Sciences, University of Michigan, Ann Arbor, MI 48109 Edited by Neil H. Shubin, University of Chicago, Chicago, IL, and approved March 19, 2021 (received for review January 21, 2021) Evolutionary innovations are scattered throughout the tree of life, organisms and is thought to facilitate morphological diversifica- and have allowed the organisms that possess them to occupy tion as different traits are able to fine-tune responses to different novel adaptive zones. While the impacts of these innovations are selective pressures (27–29). Conversely, integration refers to a well documented, much less is known about how these innova- pattern whereby different traits exhibit a high degree of covaria- tions arise in the first place. Patterns of covariation among traits tion (21, 30). Patterns of integration may be the result of pleiot- across macroevolutionary time can offer insights into the gener- ropy or functional coupling (28, 30–33). There is less of a ation of innovation. However, to date, there is no consensus on consensus on the macroevolutionary implications of phenotypic the role that trait covariation plays in this process. The evolution integration. -
Fish and Shellfish of the South Atlantic and Gulf Coasts
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln US Fish & Wildlife Publications US Fish & Wildlife Service 10-1944 Fish and Shellfish of the South tlanticA and Gulf Coasts Rachel L. Carson US Department of the Interior Follow this and additional works at: https://digitalcommons.unl.edu/usfwspubs Part of the Aquaculture and Fisheries Commons, and the Biodiversity Commons Carson, Rachel L., "Fish and Shellfish of the South tlanticA and Gulf Coasts" (1944). US Fish & Wildlife Publications. 19. https://digitalcommons.unl.edu/usfwspubs/19 This Article is brought to you for free and open access by the US Fish & Wildlife Service at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in US Fish & Wildlife Publications by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. UNITED STATES DEPARTMENT OF THE INTERIOR Harold L. Ickes, Secretary OFFICE OF THE COORDINATOR OF FISHERIES Ira N. Gabrielson, Deputy Coordinator UNITED STATES GOVERNMENT PRINTING OFFICE - WASHINGTON - 1944 For sale by the Superintendent of Documents, Washington 25, D. C. - Price 10 cents CONTENTS Introduction ........................................................... The fisheries.......................................................... The fishing grounds- ................................................. The South Atlantic coast. ...................................... The Gulf coast .................................................... Boats, men, and fishing gear ........................................... -
Fishes of the Indian River Lagoon and Adjacent Waters, Florida
FISHES OF THE INDIAN RIVER LAGOON AND ADJACENT WATERS, FLORIDA by R. Grant Gilmore, Jr. Christopher J. Donohoe Douglas W. Cooke Harbor Branch Foundation, Inc. RR 1, Box 196 Fort Pierce, Florida 33450 and David J. Herrema Applied Biology, Inc. 641 DeKalb Industrial Way Decatur, Georgia 30033 Harbor Branch Foundation, Inc. Technical Report No. 41 September 1981 Funding was provided by the Harbor Branch Foundation, Inc. and Florida Power & Light Company, Miami, Florida FISHES OF THE INDIAN RIVER LAGOON AND ADJACENT WATERS, FLORIDA R. Grant Gilmore, Jr. Christopher Donohoe Dougl as Cooke Davi d Herrema INTRODUCTION It is the intent of this presentation to briefly describe regional fish habitats and to list the fishes associated with these habitats in the Indian River lagoon, its freshwater tributaries and the adjacent continental shelf to a depth of 200 m. A brief historical review of other regional ichthyological studies is also given. Data presented here revises the first regional description and checklist of fishes in east central Florida (Gilmore, 1977). The Indian River is a narrow estuarine lagoon system extending from Ponce de Leon Inlet in Vol usia County south to Jupiter Inlet in Palm Beach County (Fig. 1). It lies within the zone of overlap between two well known faunal regimes (i.e. the warm temperate Carolinian and the tropical Caribbean). To the north of the region, Hildebrand and Schroeder (1928), Fowler (1945), Struhsaker (1969), Dahlberg (1971), and others have made major icthyofaunal reviews of the coastal waters of the southeastern United States. McLane (1955) and Tagatz (1967) have made extensive surveys of the fishes of the St. -
Copyrighted Material
Trim Size: 6.125in x 9.25ink Nelson bindex.tex V2 - 03/02/2016 12:09 A.M. Page 651 Index k Aaptosyax, 183 Acanthocleithron, 227 acanthopterygian, 280 k Abactochromis, 344 Acanthoclininae, 336 Acanthopterygii, 264, 265, Abadzekhia, 415 Acanthoclinus, 336, 337 279, 280, 284, 286, Abalistes, 523 Acanthocobitis, 192 302, 303, 353 abas, 160 Acanthocybium, 417 Acanthorhina,51 Abisaadia, 139 Acanthodes, 97, 100, 101 Acanthoscyllium,62 Abisaadichthys, 132 acanthodians, 43, 44, 96 Acanthosphex, 473 Ablabys, 471 ACANTHODIDAE, 101 Acanthostega, 111 Ablennes, 368 ACANTHODIFORMES, 97, Acanthostracion, 522 Aboma, 332 100 ACANTHOTHORACI- Aborichthys, 192 Acanthodii, 36, 40, 95, FORMES, 37 Abramis, 184 96, 98 Acanthuridae, 499, 500, 501 Abramites, 200 Acanthodopsis, 101 ACANTHURIFORMES, 420, Abudefduf, 339 Acanthodoras, 234 430, 452, 495, 497 Abyssoberyx, 310 Acanthodraco, 466 Acanthurinae, 502 Abyssobrotula, 318 Acanthogobius, 330 Acanthurini, 502 Abyssocottinae, 485, 492 Acantholabrus, 428 Acanthuroidei, 453, 462, Abyssocottus, 492 Acantholingua, 247 COPYRIGHTED MATERIAL496, 497, 498, 499 Acanthanectes, 347 Acantholiparis, 495 Acanthaphritis, 425 Acantholumpenus, 480 Acanthurus, 502 Acantharchus, 444, Acanthomorpha, 276, 278, Acantopsis, 190 445, 446 279, 280, 307 Acarobythites, 319 Acanthemblemaria, 351 acanthomorphs, 278 Acaronia, 344 Acanthistius, 446, 447 Acanthonus, 318 Acentrogobius, 332 Acanthobrama, 184 Acanthopagrus, 506 Acentronichthys, 236 Acanthobunocephalus, 233 Acanthophthalmus, 190 Acentronura, 408 Acanthocepola, 461 Acanthoplesiops, -
Isopods (Isopoda: Aegidae, Cymothoidae, Gnathiidae) Associated with Venezuelan Marine Fishes (Elasmobranchii, Actinopterygii)
Isopods (Isopoda: Aegidae, Cymothoidae, Gnathiidae) associated with Venezuelan marine fishes (Elasmobranchii, Actinopterygii) Lucy Bunkley-Williams,1 Ernest H. Williams, Jr.2 & Abul K.M. Bashirullah3 1 Caribbean Aquatic Animal Health Project, Department of Biology, University of Puerto Rico, P.O. Box 9012, Mayagüez, PR 00861, USA; [email protected] 2 Department of Marine Sciences, University of Puerto Rico, P.O. Box 908, Lajas, Puerto Rico 00667, USA; ewil- [email protected] 3 Instituto Oceanografico de Venezuela, Universidad de Oriente, Cumaná, Venezuela. Author for Correspondence: LBW, address as above. Telephone: 1 (787) 832-4040 x 3900 or 265-3837 (Administrative Office), x 3936, 3937 (Research Labs), x 3929 (Office); Fax: 1-787-834-3673; [email protected] Received 01-VI-2006. Corrected 02-X-2006. Accepted 13-X-2006. Abstract: The parasitic isopod fauna of fishes in the southern Caribbean is poorly known. In examinations of 12 639 specimens of 187 species of Venezuelan fishes, the authors found 10 species in three families of isopods (Gnathiids, Gnathia spp. from Diplectrum radiale*, Heteropriacanthus cruentatus*, Orthopristis ruber* and Trachinotus carolinus*; two aegids, Rocinela signata from Dasyatis guttata*, H. cruentatus*, Haemulon auro- lineatum*, H. steindachneri* and O. ruber; and Rocinela sp. from Epinephelus flavolimbatus*; five cymothoids: Anilocra haemuli from Haemulon boschmae*, H. flavolineatum* and H. steindachneri*; Anilocra cf haemuli from Heteropriacanthus cruentatus*; Haemulon bonariense*, O. ruber*, Cymothoa excisa in H. cruentatus*; Cymothoa oestrum in Chloroscombrus chrysurus, H. cruentatus* and Priacanthus arenatus; Cymothoa sp. in O. ruber; Livoneca sp. from H. cruentatus*; and Nerocila fluviatilis from H. cruentatus* and P. arenatus*). The Rocinela sp. and A. -
EN615 Cruise Report
ADEON Recovery/Deployment Cruise Report #EN615 - RV Endeavor 06 – 25 June 2018 San Juan, Puerto Rico to Narragansett, RI Chief Scientist Joseph Warren, Jennifer Miksis-Olds, Carmen Lawrence, Brandyn Lucca, Hannah Blair, Sebastian Velez, Cassandra Fries, Peter Larios, Madison Alstede, Stephen Ell, 1 Jennifer Conyers, Andrew Heaney, Lindsay Olson, and Katharine Coykendall Cruise Summary The objectives for this cruise were to recover bottom landers at seven sites (Figure 1) along the shelfbreak (depths ranging from 200 – 900 m roughly), redeploy a bottom lander at each site after downloading its data, collect CTD profiles to characterize hydrographic conditions at the sites, conduct net sampling to collect biological specimens at each site, and conduct fine-scale (roughly 8 km by 8 km) multi-frequency acoustic surveys at each site (Figure 2). All cruise objectives were completed safely. In addition, we collected animal specimens from net tows for collaborators associated with the DEEP SEARCH project as well as collecting water samples for eDNA analysis for DEEP SEARCH and other collaborators. Water samples were also collected by a UNH undergraduate in support of her capstone paper. We were fortunate to have good weather for much of the cruise which allowed us to complete additional net tows, CTD, and fine-scale acoustic surveys at some sites (Table 1). We appreciate the excellent work of the ship’s Captain and crew (in all aspects on the boat) in helping us to accomplish our cruise objectives. Table 1. Summary of sampling that occurred at each site location during the EN615 research cruise. We were able to accomplish additional sampling at the VAC and HAT sites. -
Generic Amendment for Addressing Essential Fish Habitat Requirements in the Following Fishery Management Plans of the Gulf of Mexico
Generic Amendment for Addressing Essential Fish Habitat Requirements in the following Fishery Management Plans of the Gulf of Mexico: <Shrimp Fishery of the Gulf of Mexico, United States Waters <Red Drum Fishery of the Gulf of Mexico <Reef Fish Fishery of the Gulf of Mexico <Coastal Migratory Pelagic Resources (Mackerels) in the Gulf of Mexico and South Atlantic <Stone Crab Fishery of the Gulf of Mexico < Spiny Lobster in the Gulf of Mexico and South Atlantic <Coral and Coral Reefs of the Gulf of Mexico (Includes Environmental Assessment) Gulf of Mexico Fishery Management Council 3018 U.S. Highway 301 North, Suite 1000 Tampa, Florida 33619-2266 813-228-2815 October 1998 This is a publication of the Gulf of Mexico Fishery Management Council pursuant to National Oceanic and Atmospheric Award No. NA87FC0003. TABLE OF CONTENTS Page TITLE ................................................................................................................... 1 ABBREVIATIONS ............................................................................................... 10 CONVERSION CHART ....................................................................................... 12 GLOSSARY .......................................................................................................... 13 1.0 PREFACE ..................................................................................................... 20 1.1 List of Preparers ........................................................................... 20 1.2 List of Persons and Agencies Consulted -
16 3.0 Description, Distribution, and Use of Essential Fish
3.0 Description, Distribution and Use of Essential Fish Habitat 3.0 DESCRIPTION, DISTRIBUTION, AND USE OF ESSENTIAL FISH HABITAT 3.1 Estuarine and Inshore Habitats 3.1.1 Estuarine 3.1.1.1 Estuarine Emergent (Saltmarsh and Brackish Marsh) 3.1.1.1.1 Description and Ecological Role and Function The saltmarsh is a type of wetland. Wetlands are classified on the basis of their hydrology, vegetation and substrate. One classification system proposed by Cowardin et al., (1979) and used by the USFWS classifies wetlands into five ecological systems. Estuarine emergents fall into two of these systems, the Estuarine and Marine. The Estuarine wetland is described as tidal wetlands in low-wave-energy environments, where the salinity is greater than 0.5 parts per thousand (ppt) and is variable owing to evaporation and the mixing of seawater and freshwater. Marine wetlands are described as tidal wetlands that are exposed to waves and currents of the open ocean and have a salinity of greater than 30 ppt. A saltmarsh, as defined by Beeflink (1977), is a “natural or semi-natural salt tolerant grassland and dwarf brushwood on the alluvial sediments bordering saline water bodies whose water level fluctuates either tidal or nontidally”. The flora comprise of erect, rooted, herbaceous hydrophytes dominated by salt- tolerant perennial plants (Cowardin et al. 1979). Structure and function of a saltmarsh are influenced by tide, salinity, nutrients and temperature. The saltmarsh can be a stressful environment to plants and animals, with rapid changes occurring in these abiotic variables (Gosselink 1980; Gosselink et al. 1974). Although species diversity may be lower than in other systems, the saltmarsh is one of the most biologically productive ecosystems in the world (Teal 1962; Teal and Teal, 1969). -
Perciformes Suborder Percoidei – Carangidae Twenty–Five Species in 13 Genera of the Family Carangidae Occur in the Present Study Area, Either As Adults Or As Larvae
1038 Perciformes Suborder Percoidei – Carangidae Twenty–five species in 13 genera of the family Carangidae occur in the present study area, either as adults or as larvae. The family is distributed worldwide, mostly in tropical and warm temperate waters, and larvae are both more speciose, and more abundant, in waters south of Cape Hatteras. Larvae are reasonably well-described, but the eggs of most species are undescribed. Carangid classification used here follows Smith-Vaniz (1984) and Larocheet al. (1984). A detailed summary of carangid larval characters prepared by Laroche et al. (2006) provided much of the information presented below. That report, and the report by Watson et al. (1996) should be consulted for more critical detail regarding carangid larvae from the tropical western Atlantic and the Eastern Pacific oceans, respectively. Meristic characters: See table of meristic characters in the Introduction to the suborder Percoidei, and the ranges of selected characters in the family Carangidae in the Perciformes Introduction. Meristic characters are fairly conservative in the family, but combinations of all counts are helpful in identifying species. For example, see figures demonstrating distributions of fin rays for species in the genusCaranx (after Berry, 1959a) on "Caranx" Introduction page. Head spines: The characters of 3 head spines are important in carangid larvae: the Supraoccipital Crest (present or ab- sent); the spine at the angle of Preopercle (simple, serrate or secondarily ornamented); and the Supraocular Ridge (composed of a small spine, a serrate ridge, or prominent spines). Other head spines that occur in only a few taxa include the Posttemporal, Supracleithral, Pterotic, and smaller spines along the ascending and anterior limbs of the Preopercle.