Dairy and Beef) Local Cattle Breed of the Alpine Areas
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Genome-Wide Analysis Reveals Selection Signatures Involved in Meat Traits and Local Adaptation in Semi-Feral Maremmana Cattle
Genome-Wide Analysis Reveals Selection Signatures Involved in Meat Traits and Local Adaptation in Semi-Feral Maremmana Cattle Slim Ben-Jemaa, Gabriele Senczuk, Elena Ciani, Roberta Ciampolini, Gennaro Catillo, Mekki Boussaha, Fabio Pilla, Baldassare Portolano, Salvatore Mastrangelo To cite this version: Slim Ben-Jemaa, Gabriele Senczuk, Elena Ciani, Roberta Ciampolini, Gennaro Catillo, et al.. Genome-Wide Analysis Reveals Selection Signatures Involved in Meat Traits and Local Adaptation in Semi-Feral Maremmana Cattle. Frontiers in Genetics, Frontiers, 2021, 10.3389/fgene.2021.675569. hal-03210766 HAL Id: hal-03210766 https://hal.inrae.fr/hal-03210766 Submitted on 28 Apr 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License ORIGINAL RESEARCH published: 28 April 2021 doi: 10.3389/fgene.2021.675569 Genome-Wide Analysis Reveals Selection Signatures Involved in Meat Traits and Local Adaptation in Semi-Feral Maremmana Cattle Slim Ben-Jemaa 1, Gabriele Senczuk 2, Elena Ciani 3, Roberta -
101889 Sp Vol II 426-427
158 RAZAS EUROPEAS DE GANADO BOVINO CARACTERÍSTICAS FUNCIONALES Esta raza se ha conservado solamente por su aptitud al combate y todas las demás características están subordinadas a ésta. Inclu- sive las hembras de casta han de haber pasado una tienta destinada a determinar su bravura y su agresividad, y cuando las vacas están con sus terneros únicamente cabe acercarse a ellas con cuidado pues detestan a los intrusos y sus reacciones son rápidas y fieras. Mu- chas vacas paren únicamente cada dos arios. Los machos que poseen el vigor y la agresividad necesarios se destinan a la lidia. Los animales de ambos sexos que son más tími- dos y dóciles, se eliminan en unas pruebas especiales y a veces se venden para el matadero. Los rendimientos a la canal son a menudo sorprendentemente buenos y pueden alcanzar hasta el 60 por ciento, pero la canal contiene una gran proporción de cortes delanteros cuya calidad gastronómica es inferior. ORGANIZACIÓN DE LA CRIANZA La Unión de Criadores de Toros de Lidia desapareció durante la guerra civil y más tarde se sustituyó por el Subgrupo de Criadores de Toros de Lidia perteneciente al Sindicato Vertical de Ganadería. Dicho Subgrupo se divide en tres zonas, a saber:Centro, Sur y Salamanca, y los criadores pueden clasificarse en varias categorías según las características de las plazas en donde sus toros tengan que combatir. No esfácil conseguir datos fidedignos sobreel número de animales de esta raza, pero se emplean anualmente unos 7.500 toros en las plazas de toros reconocidas oficialmente en España y la pobla- ción total es probablemente de unos 70.000 animales. -
Harmful Mutational Load in the Mitogenomes of Cattle Breeds
Harmful mutational load in the mitogenomes of cattle breeds Sankar Subramanian GeneCology Research Centre, School of Science and Engineering, The University of the Sunshine Coast, Moreton Bay, QLD 4502, Australia Supporting Information Table S1. List of Mitochondrial genomes used in the study Accession Accession Accession no. Breed no. Breed no. Breed AY676862 Angus-X MN200832 Brahman JN817322 Domiaty AY676863 Angus-X MN200833 Brahman JN817323 Domiaty AY676864 Angus-X MN200834 Brahman JN817324 Domiaty AY676865 Angus-X MN200836 Brahman KT184452 Domiaty AY676866 Angus-X MN200889 Brahman KT184456 Domiaty AY676867 Angus-X EU177840 Cabannina KT184457 Domiaty AY676868 Angus-X EU177850 Cabannina KT184460 Domiaty AY676869 Angus-X EU177851 Cabannina KT184462 Domiaty AY676870 Angus-X EU177866 Cabannina KT184463 Domiaty AY676871 Angus-X EU177867 Cabannina KT184469 Domiaty AY676872 Angus-X HQ184038 Cabannina KT184470 Domiaty AY676873 Angus-X EU177816 Chianina KT184471 Domiaty DQ124387 Beef EU177818 Chianina KT184472 Domiaty DQ124388 Beef EU177819 Chianina DQ124404 Holstein-Friesian DQ124390 Beef EU177820 Chianina DQ124405 Holstein-Friesian DQ124391 Beef EU177822 Chianina DQ124406 Holstein-Friesian DQ124392 Beef EU177825 Chianina DQ124407 Holstein-Friesian DQ124393 Beef EU177828 Chianina DQ124408 Holstein-Friesian DQ124394 Beef EU177841 Chianina DQ124409 Holstein-Friesian DQ124395 Beef EU177845 Chianina DQ124410 Holstein-Friesian DQ124396 Beef EU177846 Chianina DQ124411 Holstein-Friesian DQ124397 Beef EU177853 Chianina DQ124412 Holstein-Friesian DQ124398 -
Current Trends of Enterococci in Dairy Products: a Comprehensive Review of Their Multiple Roles
foods Review Current Trends of Enterococci in Dairy Products: A Comprehensive Review of Their Multiple Roles Maria de Lurdes Enes Dapkevicius 1,2,* , Bruna Sgardioli 1,2 , Sandra P. A. Câmara 1,2, Patrícia Poeta 3,4 and Francisco Xavier Malcata 5,6,* 1 Faculty of Agricultural and Environmental Sciences, University of the Azores, 9700-042 Angra do Heroísmo, Portugal; [email protected] (B.S.); [email protected] (S.P.A.C.) 2 Institute of Agricultural and Environmental Research and Technology (IITAA), University of the Azores, 9700-042 Angra do Heroísmo, Portugal 3 Microbiology and Antibiotic Resistance Team (MicroART), Department of Veterinary Sciences, University of Trás-os-Montes and Alto Douro (UTAD), 5001-801 Vila Real, Portugal; [email protected] 4 Associated Laboratory for Green Chemistry (LAQV-REQUIMTE), University NOVA of Lisboa, 2829-516 Lisboa, Portugal 5 LEPABE—Laboratory for Process Engineering, Environment, Biotechnology and Energy, Faculty of Engineering, University of Porto, 420-465 Porto, Portugal 6 FEUP—Faculty of Engineering, University of Porto, 4200-465 Porto, Portugal * Correspondence: [email protected] (M.d.L.E.D.); [email protected] (F.X.M.) Abstract: As a genus that has evolved for resistance against adverse environmental factors and that readily exchanges genetic elements, enterococci are well adapted to the cheese environment and may reach high numbers in artisanal cheeses. Their metabolites impact cheese flavor, texture, Citation: Dapkevicius, M.d.L.E.; and rheological properties, thus contributing to the development of its typical sensorial properties. Sgardioli, B.; Câmara, S.P.A.; Poeta, P.; Due to their antimicrobial activity, enterococci modulate the cheese microbiota, stimulate autoly- Malcata, F.X. -
Tesi Finale Dottorato
INDICE GENERALE 1. INTRODUZIONE............................................................................................................................3 1.1. La tracciabilità dei prodotti di origine animale: alcuni elementi.........................................3 1.2. Elementi di genetica molecolare..........................................................................................4 1.2.1. I marcatori genetici.......................................................................................................4 1.2.2. Lo stato di avanzamento nello studio del genoma degli animali di interesse zootecnico...............................................................................................................................6 1.3. Tracciabilità dei prodotti di origine animale e genetica molecolare....................................8 1.4. I prodotti “monorazza”.......................................................................................................10 1.5. Genetica e biochimica del colore del mantello: alcuni elementi........................................16 1.6. Genetica molecolare e colore del mantello........................................................................19 1.6.1. Il gene MC1R nella specie bovina.............................................................................21 1.6.2. Il gene MC1R nella specie suina................................................................................26 1.6.3. Il gene KIT nella specie bovina..................................................................................26 -
I Grandi Formaggi Di Sardegna
Per la serie Tradizione ed innovazione presentiamo: I GRANDI FORMAGGI DI SARDEGNA I GRANDI PRODUTTORI DI LATTE NEL MONDO l’Italia è al quinto posto a livello mondiale nella produzione di formaggi ovini e la Sardegna, in particolare, è la regione leader a livello nazionale per la raccolta di latte di ovino e la trasformazione in prodotti D.O.P., ovvero denominazione d’origine protetta IL LATTE OVINO DI SARDEGNA una eccellenza che il mondo ci invidia Da sempre in Sardegna la pastorizia occupa un posto di grande rilievo sociale ed economico. Oltre un milione tra pecore e capre, dalla notte dei tempi, pascolano sui prati secondo natura, ed è proprio questo tipo di allevamento e di pascolo, vario e naturale, che ci regala un latte squisito, genuino ed inimitabile, dalle proprietà organolettiche eccellenti e dal gusto raffinato. Il Latte Ovino di Sardegna unico al mondo Il nostro latte viene ceduto alle catene di distribuzione per la vendita al dettaglio ( molto apprezzato il delicato latte di capra , utilissimo nell'alimentazione dei neonati) , e soprattutto viene conferito alle cooperative di casari ed alle numerose ed avanzate aziende casearie del territorio che con sapienza antica, daranno vita ai celebri, apprezzatissimi, formaggi autoctoni. Ma quali sono i Formaggi Tipici della Sardegna? Vediamone una breve scheda tecnica PECORINO ROMANO D.O.P. Il formaggio Sardo più conosciuto nel mondo fa capolino sull’isola alla fine del 1800, diventando in breve tempo il prodotto più importante per i pastori ed i caseifici della regione. Già nel 1951 il Pecorino Romano, era stato uno dei primi formaggi Italiani, a cui sia stato assegnato un riconoscimento di qualità di livello internazionale. -
Revisiting AFLP Fingerprinting for an Unbiased Assessment of Genetic
Utsunomiya et al. BMC Genetics 2014, 15:47 http://www.biomedcentral.com/1471-2156/15/47 RESEARCH ARTICLE Open Access Revisiting AFLP fingerprinting for an unbiased assessment of genetic structure and differentiation of taurine and zebu cattle Yuri Tani Utsunomiya1†, Lorenzo Bomba2†, Giordana Lucente2, Licia Colli2,3, Riccardo Negrini2, Johannes Arjen Lenstra4, Georg Erhardt5, José Fernando Garcia1,6, Paolo Ajmone-Marsan2,3* and European Cattle Genetic Diversity Consortium Abstract Background: Descendants from the extinct aurochs (Bos primigenius), taurine (Bos taurus) and zebu cattle (Bos indicus) were domesticated 10,000 years ago in Southwestern and Southern Asia, respectively, and colonized the world undergoing complex events of admixture and selection. Molecular data, in particular genome-wide single nucleotide polymorphism (SNP) markers, can complement historic and archaeological records to elucidate these past events. However, SNP ascertainment in cattle has been optimized for taurine breeds, imposing limitations to the study of diversity in zebu cattle. As amplified fragment length polymorphism (AFLP) markers are discovered and genotyped as the samples are assayed, this type of marker is free of ascertainment bias. In order to obtain unbiased assessments of genetic differentiation and structure in taurine and zebu cattle, we analyzed a dataset of 135 AFLP markers in 1,593 samples from 13 zebu and 58 taurine breeds, representing nine continental areas. Results: We found a geographical pattern of expected heterozygosity in European taurine breeds decreasing with the distance from the domestication centre, arguing against a large-scale introgression from European or African aurochs. Zebu cattle were found to be at least as diverse as taurine cattle. -
Effect of Breed on Proximate Composition and Fatty Acid Composition of Meat from Italian Cattle
EFFECT OF BREED ON PROXIMATE COMPOSITION AND FATTY ACID COMPOSITION OF MEAT FROM ITALIAN CATTLE Meo Zilio, D. 1, Contò, M. 1, Ballico, S. 1, Ficco A. 1, Failla, S. 1 1 Center for Research and Experimentation in Agriculture, Department of Meat Production and Genetic Improvement (CRA- PCM), Monterotondo Scalo, 00015, Rome, Italy Abstract — Interest in meat fatty acid profile, even though, due to its multiple purpose composition comes from interest in eating aptitude, other specialized beef breed are often healthier meat, i.e. with a higher ratio of preferred by farmers and traders. On the other polyunsaturated (PUFA) to saturated fatty acids hand the use of Holstein male calves for and a more favourable balance between n6 and n3 fattening and meat production is very common. PUFA. The aim of this study was to compare three different bovine genetic types, Maremmana It is characterized by a fast growth and (MM), Chianina (CH) and Italian Holstein (FR) development and produces carcasses and meat on the base of their nutritional fat properties. fatter than typical beef breeds. In particular dairy Meat fatty acid profile was determined by gas breeds deposit more intramuscular fat in relation chromatography analysis. Main fatty acids and to total fat [1]. This characteristic strongly conjugated linoleic acid (CLA), saturated (SFA), influences consumers who prefer meat with monounsatured (MUFA) and polyunsatured good nutritional and organoleptic properties [2]. (PUFA) total were reported. Analysis of obtained From this point of view it is very important to data showed Maremmana breed as a carrier of reduce the saturated fatty acid intake and an some good features in this sense (e.g., low increase of polyunsaturated fatty acids with saturated fatty acid content and high oleic acid contribution) allowing it to play an important role particular regard to n3 (C18:3, C20:5 and in meat cattle breed. -
Influence of the Casein Composite Genotype on Milk Quality And
animals Article Influence of the Casein Composite Genotype on Milk Quality and Coagulation Properties in the Endangered Agerolese Cattle Breed Sara Albarella 1,* , Maria Selvaggi 2, Emanuele D’Anza 1, Gianfranco Cosenza 3 , Simonetta Caira 4, Andrea Scaloni 4, Annunziata Fontana 5, Vincenzo Peretti 1 and Francesca Ciotola 1 1 Department of Veterinary Medicine and Animal Production, University of Naples Federico II, via Delpino 1, 80137 Naples, Italy; [email protected] (E.D.); [email protected] (V.P.); [email protected] (F.C.); 2 Department of Agricultural and Environmental Science, University of Bari Aldo Moro, 70126 Bari, Italy; [email protected] 3 Department of Agriculture, University of Napoli Federico II, 80055 Portici, Italy; [email protected] 4 Proteomics & Mass Spectrometry Laboratory, ISPAAM, National Research Council, 80147 Naples, Italy; [email protected] (S.C.); [email protected] (A.S.) 5 Laboratory of milk analyses (LSL), Italian Breeders Association (AIA), 00054 Maccarese, Italy; [email protected] * Correspondence: [email protected]; Tel.: +39-081-2536502; Fax: +39-081-292981 Received: 16 April 2020; Accepted: 18 May 2020; Published: 20 May 2020 Simple Summary: Characterization of variants in casein genes allows breeders and researchers to select the most suitable cows for milk production within the same breed. It has been observed that milk from different cattle breeds with the same casein composite genotype shows different chemical and coagulation properties. The aim of this work was to characterize CSN1S1, CSN2 and CSN3 gene variants in Agerolese cattle, an Italian autochthonous breed, milk of which is used to produce “Provolone del Monaco”, a PDO cheese with a relevant economic interest for the Lattari Mountains area and the Sorrento Peninsula (Naples, Italy). -
Meta-Analysis of Mitochondrial DNA Reveals Several Population
Table S1. Haplogroup distributions represented in Figure 1. N: number of sequences; J: banteng, Bali cattle (Bos javanicus ); G: yak (Bos grunniens ). Other haplogroup codes are as defined previously [1,2], but T combines T, T1’2’3’ and T5 [2] while the T1 count does not include T1a1c1 haplotypes. T1 corresponds to T1a defined by [2] (16050T, 16133C), but 16050C–16133C sequences in populations with a high T1 and a low T frequency were scored as T1 with a 16050C back mutation. Frequencies of I are only given if I1 and I2 have not been differentiated. Average haplogroup percentages were based on balanced representations of breeds. Country, Region Percentages per Haplogroup N Reference Breed(s) T T1 T1c1a1 T2 T3 T4 I1 I2 I J G Europe Russia 58 3.4 96.6 [3] Yaroslavl Istoben Kholmogory Pechora type Red Gorbatov Suksun Yurino Ukrain 18 16.7 72.2 11.1 [3] Ukrainian Whiteheaded Ukrainian Grey Estonia, Byelorussia 12 100 [3] Estonian native Byelorussia Red Finland 31 3.2 96.8 [3] Eastern Finncattle Northern Finncattle Western Finncattle Sweden 38 100.0 [3] Bohus Poll Fjall cattle Ringamala Cattle Swedish Mountain Cattle Swedish Red Polled Swedish Red-and-White Vane Cattle Norway 44 2.3 0.0 0.0 0.0 97.7 [1,4] Blacksided Trondheim Norwegian Telemark Westland Fjord Westland Red Polled Table S1. Cont. Country, Region Percentages per Haplogroup N Reference Breed(s) T T1 T1c1a1 T2 T3 T4 I1 I2 I J G Iceland 12 100.0 [1] Icelandic Denmark 32 100.0 [3] Danish Red (old type) Jutland breed Britain 108 4.2 1.2 94.6 [1,5,6] Angus Galloway Highland Kerry Hereford Jersey White Park Lowland Black-Pied 25 12.0 88.0 [1,4] Holstein-Friesian German Black-Pied C Europe 141 3.5 4.3 92.2 [1,4,7] Simmental Evolene Raetian Grey Swiss Brown Valdostana Pezzata Rossa Tarina Bruna Grey Alpine France 98 1.4 6.6 92.0 [1,4,8] Charolais Limousin Blonde d’Aquitaine Gascon 82.57 Northern Spain 25 4 13.4 [8,9] 1 Albera Alistana Asturia Montana Monchina Pirenaica Pallaresa Rubia Gallega Southern Spain 638 0.1 10.9 3.1 1.9 84.0 [5,8–11] Avileña Berrenda colorado Berrenda negro Cardena Andaluzia Table S1. -
Clary-S Menù EN.Pdf
mixed seafood starters € 18.50 *(1-2-3-4-5-6-7-8-9-10-11-12-13-14) roasted octopus on sweet potato compote € 13.50 and mixed vegetables brittle *(1-2-3-4-5-6-7-8-9-10-11-12-13-14) clary's seafood salad € 13.00 *(8-14) tomato mussels soup € 10.00 whith grilled croutons *(2-6-14) tuna tartare and stracciatella cheese € 13.50 seasoned with orange and Pistachios *(4-7-8) Gennargentu prosciutto (ham) € 9.50 and Carasau bread *(1) Roasted Pecorino cheese € 9.50 accompanied by crunchy vegetables (from the garden) *(6-7) Assortment of cured meats € 11.50 mixed seafood starters Sardinian Fregola with sea delicacies € 15.00 *(1-2-4-9-12-13-14) roasted octopus on sweet potato compote and mixed vegetables brittle classic lobster linguine € hg 7 00 (2 people) . spaghetti with clams and bottarga 13 50 clary s seafood salad € . ' *(1-4-14) trofie with scampi, cherry tomatoes € 14.00 tomato mussels soup and lime flavoured zucchini whith grilled croutons *(1-2-4) Homemade Sardinian Gnocchetti 14 00 tuna tartare and stracciatella cheese € . with calamari, red prawns and mussels seasoned with orange and Pistachios *(1-2-3-4-14) Homemade ravioli with tomato sauce and basil € 8.50 *(1-3-7-9) Minced Boar Meat tagliatelle € 10.00 with crunchy pecorino flakes *(1-3-7-9) Ogliastra's Culurgiones with butter and sage € 12.00 *(1-7) Catch of the day € hg 6.00 *(1-4) Grilled Seafood mix € 20.00 *(2-4-6-14) French fries Seared Tuna in almond crust € 18.00 and vegetables Grilled vegetables *(1-4-8-9-10) (based on availability from the garden) Fried seafood Mix € 14.00 -
O041 Genotype by Environment Interactions and Response to Selection for Productive Traits in a Local Cattle Breed O042 Conservat
Italian Journal of Animal Science 2017; volume 16: supplement 1 ANIMAL BREEDING AND GENOMICS – GENETIC DIVERSITY two approaches. These results suggest the importance to include O041 G × E when local breeds are selected. Genotype by environment interactions and Acknowledgements response to selection for productive traits The research was funded by ANARE, Italy. in a local cattle breed Cristina Sartori1, Francesco Tiezzi2, Nadia Guzzo3, O042 Roberto Mantovani1 Conservation status and rates of 1Dipartimento di Agronomia, Animali, Alimenti, Risorse inbreeding of Italian autochthonous beef Naturali e Ambiente, University of Padova, Italy breeds 2 Department of Animal Science, NC State University, Raleigh, USA Maria Chiara Fabbri1, Christos Dadousis1, Stefano 3 Dipartimento di Biomedicina Comparata e Alimentazione, Biffani2,3, Riccardo Negrini3,4, Riccardo Bozzi1 University of Padova, Italy Contact: [email protected] 1Dipartimento di Scienze e Tecnologie Agrarie, Alimentari, Ambientali e Forestali, Sezione di Scienze Genotype by Environment interactions (G × E) happen when Animali, University of Firenze, Italy individuals have diverse adaptations to local conditions. This 2Istituto di Biologia e Biotecnologia Agraria, National Research study aimed to investigate G × E and response to selection (R) Council, Milano, Italy in dairy traits and somatic cells under the diverse environmental 3Associazione Italiana Allevatori, Roma, Italy conditions in which the local Rendena cattle breed is reared. 4Dipartimento di Scienze Animali, della Nutrizione e degli Target traits were milk, fat and protein yields (MY, FY, and PY; Alimenti, Università Cattolica del Sacro Cuore, Piacenza, Italy kg), fat and protein percentage (F% and P%), and somatic cell Contact: [email protected] score (SCS), routinely collected over 12 years as test day data of nearly 10,000 cows daughters of ~600 sires.