Fate of Organic Compounds Associated with Extractable and Bound Phases of Estuarine Sediments Deposited Under Varying Depositional Regimes
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W&M ScholarWorks Dissertations, Theses, and Masters Projects Theses, Dissertations, & Master Projects 2002 Fate of organic compounds associated with extractable and bound phases of estuarine sediments deposited under varying depositional regimes Krisa Murray Arzayus College of William and Mary - Virginia Institute of Marine Science Follow this and additional works at: https://scholarworks.wm.edu/etd Part of the Biogeochemistry Commons, Environmental Sciences Commons, and the Marine Biology Commons Recommended Citation Arzayus, Krisa Murray, "Fate of organic compounds associated with extractable and bound phases of estuarine sediments deposited under varying depositional regimes" (2002). Dissertations, Theses, and Masters Projects. Paper 1539616552. https://dx.doi.org/doi:10.25773/v5-n2m2-xc64 This Dissertation is brought to you for free and open access by the Theses, Dissertations, & Master Projects at W&M ScholarWorks. It has been accepted for inclusion in Dissertations, Theses, and Masters Projects by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Reproduced with permission ofof thethe copyright owner. Further reproductionreproduction prohibited prohibited withoutwithout permission. permission. FATE OF ORGANIC COMPOUNDS ASSOCIATED WITH EXTRACT ABLE AND BOUND PHASES OF ESTUARINE SEDIMENTS DEPOSITED UNDER VARYING DEPOSITIONAL REGIMES A Dissertation Presented to The Faculty of the School of Marine Science The College of William and Mary in Virginia In Partial Fulfillment Of the Requirements for the Degree of Doctor of Philosophy by Krisa Murray Arzayus 2002 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. APPROVAL SHEET This dissertation is submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy tfiMk to/ W > Krisa M. Arzayus Approved, April 2002 Elizqpeth A. Canuel, Ph.D. Committee Chairperson/Advisor Rebecca M. Dickhut, Ph.D. O u ^ - James N. Bauer, Ph.D. -------- Howard Kator, Ph.D. ' ■ ' . ■ t s y c — ___________ Catherine J. Chisholm-Brause, Ph.D. *"U 1 **— Lawrence M.I. Mayer, Ph.D. University of Maine, Walpole, ME Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. DEDICATION This dissertation is dedicated to my parents, Glenn B. Murray and Janice C. Murray, and my husband, L. Felipe Arzayus, fo r their constant love, support, and encouragement. Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. TABLE OF CONTENTS ACKNOWLEDGEMENTS.................................................................................................. vi LIST OF TABLES................................................................................................................ viii LIST OF FIGURES...............................................................................................................ix ABSTRACT...........................................................................................................................xii CHAPTER 1.............................................................................................................................1 Introduction CHAPTER 2.............................................................................................................................9 Fate of atmospherically deposited polycyclic aromatic hydrocarbons (PAHs) in Chesapeake Bay CHAPTER 3...........................................................................................................................35 Effects of physical mixing on the attenuation of polycyclic aromatic hydrocarbons in estuarine sediments CHAPTER 4...........................................................................................................................75 Effects of biological and physical mixing on degradation of organic matter in estuarine sediments CHAPTER 5.........................................................................................................................130 PAHs and lipid biomarker compounds associated with bound phases in estuarine sediments along an energy gradient CHAPTER 6.........................................................................................................................173 Conclusions APPENDICES.....................................................................................................................181 Appendix A. Surface sediment PAH composition, 1996-1997.........................182 Appendix B. Atmospheric particulate and gaseous PAH composition 184 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. V Appendix C. Elemental and stable isotope composition, 1996-1997 ............... 186 Appendix D. Fatty acid and neutral lipid composition of surface sediments, 1996-1997 .................................................................... 187 Appendix E. Elemental composition of surface sediments, March 2000 .........193 Appendix F. Solvent extractable fatty acid, neutral lipid, and PAH composition of surface sediments, March 2000 ...........................194 Appendix G. Elemental and stable isotope composition, specific surface area, Eh, and water content of York River core sediments ..........197 Appendix H. 2I0Pb and l37Cs activity data for York River core sediments ......204 Appendix I. Solvent extractable PAH composition of York River core sediments.........................................................................................206 Appendix J. Solvent extractable fatty acid and neutral lipid composition of York River core sediments ........................................................ 210 Appendix K. Elemental composition of solvent extracted and base hydrolyzed York River core sediments .........................................217 Appendix L. Base hydrolysable PAH composition of York River surface and core sediments .............................................................219 Appendix M. Base hydrolysable fatty acid, neutral lipid, and hydroxy fatty acid composition of York River surface and core sediments .................................................................................221 Appendix N. Total (extractable+bound) lipids and PAHs ................................ 230 Appendix O. X-radiographs of York River cores ...............................................231 VITA.....................................................................................................................................236 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. ACKNOWLEDGEMENTS I am indebted to many people who have not only helped me develop and complete a challenging and exciting dissertation, but have also shaped my abilities into the marine scientist I am today. First and foremost, I thank my advisor, Dr. Elizabeth Canuel, for being my inspiration and providing professional, financial, and emotional support throughout my tenure at VIMS. I also thank Dr. Rebecca Dickhut, who has served, if not by name, as a second advisor, opening up her lab to me and providing critical input for the PAH portion of my research. Dr. Larry Mayer was instrumental in the early development of my project and provided valuable input. Thanks to Dr. Catherine Chisholm-Brause, who taught me everything I needed to know about surface chemistry and assisted me with my specific surface area measurements. Drs. James Bauer and Howard Kator also helped give me a broader perspective on the implications of this work. Completion of an interdisciplinary project requires the aid of many people and labs, and this dissertation was no exception. Thanks to the isotope geochronology lab (Steve Kuehl, Linda Meneghini, Tara Kniskem) for assistance with collecting and processing the sediment cores, as well as the additional “mudslingers” who helped slice and dice sediment over the years: Libby MacDonald, Rob McDaniel, Shannon Burcham, Melissa Ederington-Hagy, Andy Zimmerman, Padma T.V., Jen Rhode, Beth Hinchey, Kimani Kimbrough, and Felipe Arzayus. Thanks to Linda Schaffiier for use o f the Eh meter and to Beth Hinchey for sharing all of her Eh knowledge and experience with me. In the lab, special thanks to Beth Waterson, who provided the solvent extraction and base hydrolysable M3 sediment data. Thanks to Shelby Walker and Kimani Kimbrough for sharing Rebecca’s GC-MS with me, to Leigh McCallister for shooting samples for me, and to Shannon, Melissa, Andy, Vicki, Leigh, Ai Ning, and Michelle for their expertise and camaraderie in the lab. I also would like to thank F.I.R.S.T. students Melissa Pollock, Shetal Patel, and Megan Fairobent for their contributions to my project and for excellent mentoring experiences. I would like to thank the entire VIMS directory, since I am certain that everyone has helped me out in some way over the years. In brief, thanks to the publications department (Susan, Kay, and Harold) for the countless slides and posters, to the library staff (Diane, Joey, Chuck, and Marilyn) for all of those hard-to-find journal articles, to the vessels department (Durand, Chuck, Charles, and Raymond) for getting me to my study sites in the first place, to the physical sciences secretaries (Cindy, Cynthia, and Beth) for always providing the supplies, to the registrar’s office (Sue, Gloria, and Fonda) for making sure my degree paperwork was on track, to the IT department (Newt and Robert) encouraging my preference