CHAPTER 5 Mass Spectrometry
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About Magnetic Sector Mass Spec- Trometers
About Magnetic Sector Mass Spec- trometers Double-focusing magnetic sector mass spectrometers provide high sensitivity, high resolution, and a reproducibility that is unmatched in any other kind of mass analyzer. A double-focusing magnetic sector mass spectrometer has at least four components: . An ion source in which ions are formed and accelerated to energies of up to as high as 10 kilovolts. A magnetic sector with a magnetic field that exerts a force perpendicular to the ion mo- tion to deflect ions according to their momentum. An electric sector with an electric field that exerts a force perpendicular to the ion mo- tion to deflect ions according to their kinetic energy. A detector that produces a response that is proportional to the number of ions. Slits are placed in the ion path to define the positions and energies of the ions that strike the detector. In general, decreasing the slit widths increases the mass resolution but re- duces the number of ions that are detected. Additional electrostatic lenses are com- monly used to shape and deflect the ion beam to optimize peak shape and maximize ion beam transmission from the source to the detector. JEOL uses octapole and quadrupole focusing lenses to simplify the ion optical design. Collision chambers in the first field-free region (just after the ion source) and second field-free region (just after the magnet and before the electric sector) are used to induce ions to fragment in collision-induced-dissociation experiments (MS/MS). The term "double-focusing" refers to the fact that the combination of electric and mag- netic sectors focuses ions according to both direction and energy to provide higher reso- lution than can be obtained with a single magnetic sector. -
ADVANCED SPECTROMETER Introduction
ADVANCED SPECTROMETER Introduction In principle, a spectrometer is the simplest of scientific very sensitive detection and precise measurement, a real instruments. Bend a beam of light with a prism or diffraction spectrometer is a bit more complicated. As shown in Figure grating. If the beam is composed of more than one color of 1, a spectrometer consists of three basic components; a light, a spectrum is formed, since the various colors are collimator, a diffracting element, and a telescope. refracted or diffracted to different angles. Carefully measure The light to be analyzed enters the collimator through a the angle to which each color of light is bent. The result is a narrow slit positioned at the focal point of the collimator spectral "fingerprint," which carries a wealth of information lens. The light leaving the collimator is therefore a thin, about the substance from which the light emanates. parallel beam, which ensures that all the light from the slit In most cases, substances must be hot if they are to emit strikes the diffracting element at the same angle of inci- light. But a spectrometer can also be used to investigate cold dence. This is necessary if a sharp image is to be formed. substances. Pass white light, which contains all the colors of The diffracting element bends the beam of light. If the beam the visible spectrum, through a cool gas. The result is an is composed of many different colors, each color is dif- absorption spectrum. All the colors of the visible spectrum fracted to a different angle. are seen, except for certain colors that are absorbed by the gas. -
Spectrum 100 Series User's Guide
MOLECULAR SPECTROSCOPY SPECTRUM 100 SERIES User’s Guide 2 . Spectrum 100 Series User’s Guide Release History Part Number Release Publication Date L1050021 A October 2005 Any comments about the documentation for this product should be addressed to: User Assistance PerkinElmer Ltd Chalfont Road Seer Green Beaconsfield Bucks HP9 2FX United Kingdom Or emailed to: [email protected] Notices The information contained in this document is subject to change without notice. Except as specifically set forth in its terms and conditions of sale, PerkinElmer makes no warranty of any kind with regard to this document, including, but not limited to, the implied warranties of merchantability and fitness for a particular purpose. PerkinElmer shall not be liable for errors contained herein for incidental consequential damages in connection with furnishing, performance or use of this material. Copyright Information This document contains proprietary information that is protected by copyright. All rights are reserved. No part of this publication may be reproduced in any form whatsoever or translated into any language without the prior, written permission of PerkinElmer, Inc. Copyright © 2005 PerkinElmer, Inc. Trademarks Registered names, trademarks, etc. used in this document, even when not specifically marked as such, are protected by law. PerkinElmer is a registered trademark of PerkinElmer, Inc. Spectrum, Spectrum 100, and Spectrum 100N are trademarks of PerkinElmer, Inc. Spectrum 100 Series User’s Guide . 3 Contents Contents............................................................................................... -
Experiment 2 Radiation in the Visible Spectrum Emission Spectra Can Be
Experiment 2 Radiation in the Visible Spectrum Emission spectra can be a unique fingerprint of an atom or molecule. The photon energies and wavelengths are directly related to the allowed quantum energy states of the system. In the following experiments we will examine the radiation given off by sources radiating in the visible region. We will be using a spectrometer produced by Ocean Optics. Light enters the spectrometer via a fiber optic cable. Inside the spectrometer a diffraction grating diffracts the different frequencies onto a CCD. The CCD basically ”counts” the photons according to wavelength. The data is transferred via a usb port to a PC. The Ocean Optics software displays the spectrum as counts versus wavelength. We will examine the spectra given off by the following sources: incandescent light filament, hydrogen, helium, various light emitting diodes and a laser pointer. You will also be given an unknown gas discharge tube and will need to identify the gas via its spectral emissions Pre Lab 1) Obtain a spectrum for hydrogen, mercury, sodium and neon gas emissions. The spectrum must contain an accurate listing of major emission lines (in nm), not simply a color photo of the emission. 2) Make yourself familiar with the manual for the spectrometer and the software. These are available via the following links: http://www.oceanoptics.com/technical/hr4000.pdf http://www.oceanoptics.com/technical/SpectraSuite.pdf These documents are also available on Black Board. 3) How does the Ocean Optics spectrometer work? In your answer list its three main components and describe what each component does. -
An Introduction to Mass Spectrometry
An Introduction to Mass Spectrometry by Scott E. Van Bramer Widener University Department of Chemistry One University Place Chester, PA 19013 [email protected] http://science.widener.edu/~svanbram revised: September 2, 1998 © Copyright 1997 TABLE OF CONTENTS INTRODUCTION ........................................................... 4 SAMPLE INTRODUCTION ....................................................5 Direct Vapor Inlet .......................................................5 Gas Chromatography.....................................................5 Liquid Chromatography...................................................6 Direct Insertion Probe ....................................................6 Direct Ionization of Sample ................................................6 IONIZATION TECHNIQUES...................................................6 Electron Ionization .......................................................7 Chemical Ionization ..................................................... 9 Fast Atom Bombardment and Secondary Ion Mass Spectrometry .................10 Atmospheric Pressure Ionization and Electrospray Ionization ....................11 Matrix Assisted Laser Desorption/Ionization ................................ 13 Other Ionization Methods ................................................13 Self-Test #1 ...........................................................14 MASS ANALYZERS .........................................................14 Quadrupole ............................................................15 -
Orbitrap Fusion Tribrid Mass Spectrometer
MASS SPECTROMETRY Product Specifications Thermo Scientific Orbitrap Fusion Tribrid Mass Spectrometer Unmatched analytical performance, revolutionary MS architecture The Thermo Scientific™ Orbitrap Fusion™ mass spectrometer combines the best of quadrupole, Orbitrap, and linear ion trap mass analysis in a revolutionary Thermo Scientific™ Tribrid™ architecture that delivers unprecedented depth of analysis. It enables life scientists working with even the most challenging samples—samples of low abundance, high complexity, or difficult-to-analyze chemical structure—to identify more compounds faster, quantify them more accurately, and elucidate molecular composition more thoroughly. • Tribrid architecture combines quadrupole, followed by ETD or EThCD for glycopeptide linear ion trap, and Orbitrap mass analyzers characterization or HCD followed by CID • Multiple fragmentation techniques—CID, for small-molecule structural analysis. HCD, and optional ETD and EThCD—are available at any stage of MSn, with The ultrahigh resolution of the Orbitrap mass subsequent mass analysis in either the ion analyzer increases certainty of analytical trap or Orbitrap mass analyzer results, enabling molecular-weight • Parallelization of MS and MSn acquisition determination for intact proteins and confident to maximize the amount of high-quality resolution of isobaric species. The unsurpassed data acquired scan rate and resolution of the system are • Next-generation ion sources and ion especially useful when dealing with complex optics increase system ease of operation and robustness and low-abundance samples in proteomics, • Innovative instrument control software metabolomics, glycomics, lipidomics, and makes setup easier, methods more similar applications. powerful, and operation more intuitive The intuitive user interface of the tune editor The Orbitrap Fusion Tribrid MS can perform and method editor makes instrument calibration a wide variety of analyses, from in-depth and method development easier. -
Mass Spectrometer
CLASSICAL CONCEPT REVIEW 6 Mass Spectrometer One of several devices currently used to measure the charge-to-mass ratio q m of charged atoms and molecules is the mass spectrometer. The mass spectrometer is used to find the charge-to-mass ratio of ions of known charge by measuring> the radius of their circular orbits in a uniform magnetic field. Equation 3-2 gives the radius of R for the circular orbit of a particle of mass m and charge q moving with speed u in a magnetic field B that is perpendicular to the velocity of the particle. Figure MS-1 shows a simple schematic drawing of a mass spectrometer. Ions from an ion source are accelerated by an electric field and enter a uniform magnetic field produced by an electromagnet. If the ions start from rest and move through a poten- tial DV, their kinetic energy when they enter the magnetic field equals their loss in potential energy, qDV: B out 1 mu2 = qDV MS-1 2 R The ions move in a semicircle of radius R given by Equation 3-2 and exit through a P P narrow aperture into an ion detector (or, in earlier times, a photographic plate) at point 1 u 2 P2, a distance 2R from the point where they enter the magnet. The speed u can be eliminated from Equations 3-2 and MS-1 to find q m in terms of DV, B, and R. The + + q result is Source > – + q 2DV ∆V = 2 2 MS-2 m B R MS-1 Schematic drawing of a mass spectrometer. -
Hydrogen Abstraction from Titanium and Zirconium Oxides
The Pennsylvania State University The Graduate School Eberly College of Science NEW INSIGHTS IN THE GAS-PHASE ION CHEMISTRY OF GROUP IVB TRANSITION METAL OXIDES: CLUSTER MODELS FOR CATALYSIS A Dissertation in Chemistry by Christopher L. Harmon © 2016 Christopher L. Harmon Submitted in Partial Fulfillment Of the Requirements For the Degree of Doctor of Philosophy August 2016 The dissertation of Christopher L. Harmon was reviewed and approved* by the following: A. W. Castleman, Jr. Evan Pugh Professor of Chemistry and Physics Eberly Distinguished Chair in Science Dissertation Adviser Chair of Committee Nicholas Winograd Evan Pugh Professor of Chemistry Lasse Jensen Associate Professor of Chemistry Robert M. Rioux Friedrich G. Helfferich Associate Professor of Chemical Engineering Professor of Chemistry Kenneth S. Feldman Professor of Chemistry Graduate Program Chair *Signatures are on file in the Graduate School. ii Abstract The study of gas-phase cluster models has emerged as a useful tool to model catalytic active sites on surfaces. By observing how the reactivity of TMO clusters changes with cluster size, active site, and metal composition, we draw insights about the molecular factors governing reactivity and selectivity. The aim is to provide a conceptual framework to drive the development of improved catalysts with higher activity and selectivity. As group IVB transition metal oxides (TMOs) are widely used as catalysts and supports, we have undertaken mass spectrometric reactivity studies of titanium, zirconium, and hafnium oxide clusters with small organic molecules of interest in catalysis. We particularly note the differences in reactivity observed as the identity of the + metal in the cluster changes. We report the reactivity of MxO2x (M = Ti, Zr) clusters that contain radical atomic oxygen, O•−, with methane, ethane, propane, ethylene, and propylene. -
Development and Applications of a Real-Time Magnetic Electron
Louisiana State University LSU Digital Commons LSU Doctoral Dissertations Graduate School 12-13-2017 Development and Applications of a Real-time Magnetic Electron Energy Spectrometer for Use with Medical Linear Accelerators Paul Ethan Maggi Louisiana State University and Agricultural and Mechanical College, [email protected] Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_dissertations Part of the Health and Medical Physics Commons Recommended Citation Maggi, Paul Ethan, "Development and Applications of a Real-time Magnetic Electron Energy Spectrometer for Use with Medical Linear Accelerators" (2017). LSU Doctoral Dissertations. 4180. https://digitalcommons.lsu.edu/gradschool_dissertations/4180 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Doctoral Dissertations by an authorized graduate school editor of LSU Digital Commons. For more information, please [email protected]. DEVELOPMENT AND APPLICATIONS OF A REAL-TIME MAGNETIC ELECTRON ENERGY SPECTROMETER FOR USE WITH MEDICAL LINEAR ACCELERATORS A Dissertation Submitted to the Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College in partial fulfillment of the requirements for the degree of Doctor in Philosophy in The Department of Physics and Astronomy by Paul Ethan Maggi B.S., California Polytechnic State University, San Luis Obispo, 2012 May 2018 ACKNOWLEDGEMENTS I thank Kenneth Hogstrom for providing the initial idea for this project, as well as partial funding support. I thank Edison Liang of Rice University for providing the magnet block and measurements of the magnetic field. I thank my adviser, Kip Matthews for his advice, guidance, and patience during my tenure at LSU. -
MASS SPECTROSCOPY APPLIED to GAS LEAK DETECTION and FUEL IONIZATION by JAYANTH POTHIREDDY a THESIS PRESENTED to the GRADUATE
MASS SPECTROSCOPY APPLIED TO GAS LEAK DETECTION AND FUEL IONIZATION By JAYANTH POTHIREDDY A THESIS PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE UNIVERSITY OF FLORIDA 2003 Copyright 2003 by Jayanth Pothireddy To my friends ACKNOWLEDGMENTS I would like to sincerely thank Dr. Corin Segal for giving me this wonderful opportunity and for his unlimited support, understanding and incredible patience without which I would not have successfully completed my thesis. I would also like to thank Dr. David Mikolaitis and Dr. Martin Vala for their support and Dr. Norman Fitz-Coy for his valuable suggestions. Many thanks go to Mr. Jan Szczepanski for giving me “first lessons” on mass spectrometry, invaluable suggestions, tremendous support and help in developing the mass spectrometry system. My heartfelt thanks go to my friends Venkat, Sujith, Gopi, Anand, “Iranian bros” Amir and Omid, Weizhong, Sampath, Harsha, Adil, Anant, Sasidhar, Charan, Danny, Jonas, Nelson, Zhu Wei, Ron, “Dr” Amit, Errol, Anurag, Priya, Amit “Saale” and Balaji for their support and understanding. I thank Ron Brown for constructing a nice model of the Space Shuttle aft compartment and for his help in moving the mass spectrometer cart to and fro from “chemistry” to “aero.” iv TABLE OF CONTENTS Page ACKNOWLEDGMENTS.................................................................................................. iv LIST OF FIGURES...........................................................................................................vii -
Mass Spectrometry (Part-II) Electrostatic Acceleration System
S.O.s. in environmental chemistry Jiwaji university, gwalior Presentation on:- Mass Spectrometry (part-II) Electrostatic Acceleration System:- 1) The positive ions formed in the ionisation chamber are withdrawn by the electric field which exists between the first accelerator plate and the second repeller plate. 2) A strong electrostatic field between accelerator and repeller plate accelerates the ions of masses m1 m2 m3... to their final velocities. 3) The ions which escape through slit having velocities and kinetic energies give. 2 2 2 eV=1/2m1v1 =1/2m2v2 =1/2m3v3 ...... Vacuum system:- 1) A high vacuum is to be maintained. 2) The inlet system is generally maintained at 0.015 torr, the ion source at 10-15 torr and analyzer tube at 10-7 torr or as low as possible. 3) Oil diffusion and mercury diffusion pumps are commonly used in different types of combination Mass analyzers:- 1) Separate ions based on their mass-to-charge ratio (m/z) 2) Operate under high vacuum (keeps ions from bumping into gas molecules) 3) Actually measure mass-to-charge ratio of ions (m/z) Types of mass analyzers:- 1) Quadrupole mass analyzer 2) Time of flight analyzer (TOF) 3) Magnetic sector mass analyzer a) Single focusing b) Double focusing 4) Quadrupole ion trap mass analyzer Quadrupole mass analyzer:- 1) It consists of 4 voltage carrying rods. 2) The ions are pass from one end to another end 3) During this apply the radiofrequency and voltage complex oscillations will takes place. 4) Here the single positive charge ions shows the stable oscillation and the remaining the shows the unstable oscillations Magnetic Sector Mass Analyzer:- In magnetic sector analyzers ions are accelerated through a flight tube, where the ions are separated by charge to mass ratios. -
Compositional Analysis of Complex Organic Mixtures by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Zhigang Wu
Florida State University Libraries Electronic Theses, Treatises and Dissertations The Graduate School 2004 Compositional Analysis of Complex Organic Mixtures by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Zhigang Wu Follow this and additional works at the FSU Digital Library. For more information, please contact [email protected] THE FLORIDA STATE UNIVERSITY COLLEGE OF ARTS AND SCIENCES Compositional Analysis of Complex Organic Mixtures by Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry By Zhigang Wu A Dissertation submitted to the Department of Chemistry and Biochemistry in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Degree Awarded: Spring Semester, 2004 Copyright2004 Zhigang Wu All Rights Reserved The members of the Committee approve the Dissertation of Zhigang Wu Defended on April 7, 2004. Alan G. Marshall Professor Directing Dissertation William M. Landing Outside Committee Member William T. Cooper Committee Member Timothy A. Cross Committee Member Ryan P. Rodgers Committee Member The Office of Graduate Studies has verified and approved the above named committee members. ii To my parents, Xiaohua Wu and Shiping Cao; iii ACKNOWLEDGMENTS First, I need to thank Dr. Alan G. Marshall, my academic graduate advisor and supporter. His deep and broad academic knowledge and great personality are invaluable throughout my graduate career. His wise and forecasting advices has helped me directly cut to the “point” and inspired me to discover more underneath. I also wish to acknowledge Dr. Ryan P. Rodgers, my supervisor, for his expertise, direction, and support. His initiation and development in petroleum applications have led me to a broader and better understanding of this area.