Geographic Distributions of Karyological Races Of
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Biogeography and Evolution of the Carassius Auratus-Complex in East
Takada et al. BMC Evolutionary Biology 2010, 10:7 http://www.biomedcentral.com/1471-2148/10/7 RESEARCH ARTICLE Open Access Biogeography and evolution of the Carassius auratus-complex in East Asia Mikumi Takada1,2*, Katsunori Tachihara1, Takeshi Kon2, Gunji Yamamoto2, Kei’ichiro Iguchi3, Masaki Miya4, Mutsumi Nishida2 Abstract Background: Carassius auratus is a primary freshwater fish with bisexual diploid and unisexual gynogenetic triploid lineages. It is distributed widely in Eurasia and is especially common in East Asia. Although several genetic studies have been conducted on C. auratus, they have not provided clear phylogenetic and evolutionary descriptions of this fish, probably due to selection bias in sampling sites and the DNA regions analysed. As the first step in clarifying the evolutionary entity of the world’s Carassius fishes, we attempted to clarify the phylogeny of C. auratus populations distributed in East Asia. Results: We conducted a detailed analysis of a large dataset of mitochondrial gene sequences [CR, 323 bp, 672 sequences (528 sequenced + 144 downloaded); CR + ND4 + ND5 + cyt b, 4669 bp in total, 53 sequences] obtained from C. auratus in East Asia. Our phylogeographic analysis revealed two superlineages, one distributed mainly among the Japanese main islands and the other in various regions in and around the Eurasian continent, including the Ryukyus and Taiwan. The two superlineages include seven lineages with high regional specificity that are composed of endemic populations indigenous to each region. The divergence time of the seven lineages was estimated to be 0.2 million years ago (Mya) by a fossil-based method and 1.0-1.9 Mya by the molecular clock method. -
Flood Loss Model Model
GIROJ FloodGIROJ Loss Flood Loss Model Model General Insurance Rating Organization of Japan 2 Overview of Our Flood Loss Model GIROJ flood loss model includes three sub-models. Floods Modelling Estimate the loss using a flood simulation for calculating Riverine flooding*1 flooded areas and flood levels Less frequent (River Flood Engineering Model) and large- scale disasters Estimate the loss using a storm surge flood simulation for Storm surge*2 calculating flooded areas and flood levels (Storm Surge Flood Engineering Model) Estimate the loss using a statistical method for estimating the Ordinarily Other precipitation probability distribution of the number of affected buildings and occurring disasters related events loss ratio (Statistical Flood Model) *1 Floods that occur when water overflows a river bank or a river bank is breached. *2 Floods that occur when water overflows a bank or a bank is breached due to an approaching typhoon or large low-pressure system and a resulting rise in sea level in coastal region. 3 Overview of River Flood Engineering Model 1. Estimate Flooded Areas and Flood Levels Set rainfall data Flood simulation Calculate flooded areas and flood levels 2. Estimate Losses Calculate the loss ratio for each district per town Estimate losses 4 River Flood Engineering Model: Estimate targets Estimate targets are 109 Class A rivers. 【Hokkaido region】 Teshio River, Shokotsu River, Yubetsu River, Tokoro River, 【Hokuriku region】 Abashiri River, Rumoi River, Arakawa River, Agano River, Ishikari River, Shiribetsu River, Shinano -
Keys to the Flesh Flies of Japan, with the Description of a New Genus And
〔Med. Entomol. Zool. Vol. 66 No. 4 p. 167‒200 2015〕 167 reference DOI: 10.7601/mez.66.167 Keys to the esh ies of Japan, with the description of a new genus and species from Honshu (Diptera: Sarcophagidae) Hiromu Kurahashi*, 1) and Susumu Kakinuma2) * Corresponding author: [email protected] 1) Department of Medical Entomology, National Institute of Infectious Diseases, Toyama 1‒23‒1, Shinjuku-ku, Tokyo 162‒8640 Japan 2) IDD Yamaguchi Lab., Aobadai 11‒22, Yamaguchi-shi, Yamaguchi 753‒0012 Japan (Received: 9 June 2015; Accepted: 2 October 2015) Abstract: A new genus and species of the Japanese Sarcophagidae, Papesarcophaga kisarazuensis gen. & sp. nov. is described and illustrated from Honshu, Japan. Practical keys to the Japanese 43 genera and 122 species are provided including this new species. A check list and data of specimens examined are also provided. Key words: Diptera, flesh flies, new species, new genus, Sarcophagidae, Japan INTRODUCTION The collection of Sarcophagidae made by the first author was studied during the course of the taxonomical studies on the calypterate muscoid flies from Japan since 1970 (Kurahashi, 1970). This was a revision of the subfamily Miltogramatinae dealing with seven genera and 14 species. Before this, Takano (1950) recorded seven genera and nine species of Japanese Sarcophagidae. Many investigation on the Japanese flesh flies made by Drs. K. Hori, R. Kano and S. Shinonaga beside the present authors. The results of these authors were published in the part of Sacophagidae, Fauna Japanica (Insecta: Diptera) and treated 23 genera and 65 species of the subfamilies of Sarcophaginae and Agriinae (=Paramacronychiinae), but the subfamily Miltogrammatinae was not included (Kano et al., 1967). -
PHYLOGENY and ZOOGEOGRAPHY of the SUPERFAMILY COBITOIDEA (CYPRINOIDEI, Title CYPRINIFORMES)
PHYLOGENY AND ZOOGEOGRAPHY OF THE SUPERFAMILY COBITOIDEA (CYPRINOIDEI, Title CYPRINIFORMES) Author(s) SAWADA, Yukio Citation MEMOIRS OF THE FACULTY OF FISHERIES HOKKAIDO UNIVERSITY, 28(2), 65-223 Issue Date 1982-03 Doc URL http://hdl.handle.net/2115/21871 Type bulletin (article) File Information 28(2)_P65-223.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP PHYLOGENY AND ZOOGEOGRAPHY OF THE SUPERFAMILY COBITOIDEA (CYPRINOIDEI, CYPRINIFORMES) By Yukio SAWADA Laboratory of Marine Zoology, Faculty of Fisheries, Bokkaido University Contents page I. Introduction .......................................................... 65 II. Materials and Methods ............... • • . • . • . • • . • . 67 m. Acknowledgements...................................................... 70 IV. Methodology ....................................•....•.........•••.... 71 1. Systematic methodology . • • . • • . • • • . 71 1) The determinlttion of polarity in the morphocline . • . 72 2) The elimination of convergence and parallelism from phylogeny ........ 76 2. Zoogeographical methodology . 76 V. Comparative Osteology and Discussion 1. Cranium.............................................................. 78 2. Mandibular arch ...................................................... 101 3. Hyoid arch .......................................................... 108 4. Branchial apparatus ...................................•..••......••.. 113 5. Suspensorium.......................................................... 120 6. Pectoral -
FY2018 Results of the Radioactive Material Monitoring in the Water Environment
FY2018 Results of the Radioactive Material Monitoring in the Water Environment March 2020 Ministry of the Environment Contents Outline .......................................................................................................................................................... 1 Part 1: National Radioactive Material Monitoring in the Water Environment throughout Japan (FY2018) . 6 1 Objective and Details ............................................................................................................................. 6 1.1 Objective .................................................................................................................................... 6 1.2 Details ........................................................................................................................................ 6 2 Survey Methods and Analysis Methods .............................................................................................. 19 2.1 Survey methods ....................................................................................................................... 19 2.2 Analysis methods ..................................................................................................................... 20 3 Results ................................................................................................................................................. 22 3.1 Detection of total β radioactivity and γ-ray emitting radionuclides .......................................... 22 (1) Public water -
Bridge Architecture in Japan
International Journal of the Physical Sciences Vol. 6(17), pp. 4302-4310, 2 September, 2011 Available online at http://www.academicjournals.org/IJPS DOI: 10.5897/IJPS11.072 ISSN 1992 - 1950 ©2011 Academic Journals Full Length Research Paper Bridge architecture in Japan Hamed Niroumand1*, M. F. M. Zain2 and Maslina Jamil1 1Department of Architecture, Faculty of Engineering, National University of Malaysia (UKM), Malaysia. 2Deputy Dean, Faculty of Engineering, National University of Malaysia (UKM), Malaysia. Accepted 27 June, 2011 A bridge is a structure built to span physical obstacle such as a body of water, city, or road, for the purpose of providing passage over the obstacle. Bridges are a unique offshoot of architecture and possess their own associated terms, components and styles. This paper presents the second part of Japanese bridges by investigating architectural aspects of its design. Limited usable land in heavily populated areas of Japan has often necessitated the design of unique bridge approaches. One of such design is the spiral viaduct bridge approach. When this design is used, care is taken to make the structures aesthetically appealing. An important reason for the bridge construction will lead into a critical study of bridge aesthetics and structural design. According to the configuration of frameworks, bridges may be described as arched, girdered and cable stayed or suspension. Refereeing to Japanese bridges, those most frequently provided cable stayed in the construction of bridges are important factor in architecture and bridges aesthetic. This paper presents a brief history of bridge design in Japan, and then discusses the influence of technical factors on Japan bridges design. -
A Synopsis of the Parasites from Cyprinid Fishes of the Genus Tribolodon in Japan (1908-2013)
生物圏科学 Biosphere Sci. 52:87-115 (2013) A synopsis of the parasites from cyprinid fishes of the genus Tribolodon in Japan (1908-2013) Kazuya Nagasawa and Hirotaka Katahira Graduate School of Biosphere Science, Hiroshima University Published by The Graduate School of Biosphere Science Hiroshima University Higashi-Hiroshima 739-8528, Japan December 2013 生物圏科学 Biosphere Sci. 52:87-115 (2013) REVIEW A synopsis of the parasites from cyprinid fishes of the genus Tribolodon in Japan (1908-2013) Kazuya Nagasawa1)* and Hirotaka Katahira1,2) 1) Graduate School of Biosphere Science, Hiroshima University, 1-4-4 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8528, Japan 2) Present address: Graduate School of Environmental Science, Hokkaido University, N10 W5, Sapporo, Hokkaido 060-0810, Japan Abstract Four species of the cyprinid genus Tribolodon occur in Japan: big-scaled redfin T. hakonensis, Sakhalin redfin T. sachalinensis, Pacific redfin T. brandtii, and long-jawed redfin T. nakamuraii. Of these species, T. hakonensis is widely distributed in Japan and is important in commercial and recreational fisheries. Two species, T. hakonensis and T. brandtii, exhibit anadromy. In this paper, information on the protistan and metazoan parasites of the four species of Tribolodon in Japan is compiled based on the literature published for 106 years between 1908 and 2013, and the parasites, including 44 named species and those not identified to species level, are listed by higher taxon as follows: Ciliophora (2 named species), Myxozoa (1), Trematoda (18), Monogenea (0), Cestoda (3), Nematoda (9), Acanthocephala (2), Hirudinida (1), Mollusca (1), Branchiura (0), Copepoda (6 ), and Isopoda (1). For each taxon of parasite, the following information is given: its currently recognized scientific name, previous identification used for the parasite occurring in or on Tribolodon spp.; habitat (freshwater, brackish, or marine); site(s) of infection within or on the host; known geographical distribution in Japan; and the published source of each locality record. -
A Checklist and Bibliography of Parasites of Salmonids of Japan
;r c j . 3 $JJ#~,Sci. Rep. Hokkaido Salmon Hatchery, (41) : 1-75 (1987) A Checklist and Bibliography of Parasites of Salmonids of Japan Kazuya NAGASAWA*',Shigehiko URAWA", and Teruhiko AWAKURA*~ Abstract Information on the parasites of salmonids in Japanese waters that was published during the years 1889-1986 is assembled in the form of Parasite-Host and Host- Parasite lists with accompanying bibliography. Ninety-four named species of parasites (18 Protozoa, 5 Monogenea, 21 Trematoda, 7 Cestoidea, 19 Nematoda, 15 Acanthocephala, 1 Hirudinoidea, 1 Mollusca, 1 Branchiura, 5 Copepoda, 1 Isopoda) have been reported, and numerous other parasites not identified to species level are also included. The Parasite-Host list, arranged on a taxonomic basis, includes for each parasite species its currently recognized scientific name, and synonyms oc- curring in the literature, habitat (freshwater or marine), location of infection (site) within the host, species of host(s), known geographical distribution in Japanese waters, and the published source for each host and locality record. Where neces- sary, remarks and footnotes dealing with such topics as taxonomy, nomenclature, and misidentifications are included. The Host-Parasite list summarizes the species of parasites from each species of salmonid and their geographical distributions. Although taxonomic revision is not the aim of the checklist, the following three new combinations and one new synonym are proposed : Microsporidium takedai (Awa- kura, 1974) n. comb. for Nosemu tukedui ; Sterliudochonu ephemeridurum (Linstow, 1872) n. comb. for Cystidicoloides ephemeridurum ; and Salvelinema ishii (Fujita, 1941) new synonym of S. salvelini (Fujita, 1939) n. comb. for Metabronemu salvelini. Con tents Introduction ................................................................................................ 2 Parasite-Host List ...................................................................................... -
Cycling Map Visiting
What is a Sato no Eki? Recommended Areas to See Let’s bike At Sato no Eki, various types of information about the local area is There are lots of areas to see in the four courses. Out of all great places, in Iwakuni! available, from tourism to household living. They are operated by here are some highlighted areas you should check out. Get off your bike, community residents. You may also use them as free rest spaces. relax, and enjoy yourself. Address ☎TEL Open Closed Facilities Iwakuni ●North Course ●Circuit Course ●North Course ●Circuit Course Jakuchikyo Tourist Fukadanikyo Onsen 1 Information Center 2 (Hot spring) Seiryu no Sato Cycling Map Visiting The Tourist Information Center at the entrance of Jakuchikyo Located by the side of the Fukadani River, a limpid stream Sato no Eki Valley, an area known for the Goryu Waterfalls and the that is famous as a spot for "sawa" alpine climbing. Enjoy a Jakuchi River. The Jakuchi River was chosen as one of the best relaxing hot bath and delicious local food. Cottage 100 natural water sources in Japan. A lot of tourists visit here, accommodation is available as well. especially during the beautiful autumn foliage season. Nishikimachi Usa, Iwakuni City ☎0827-74-0776 8:00~17:00 From December 1 to March 31 1075 Nishikimachi Usago, Iwakuni City ☎0827-74-5100 10:00~20:00 (Opens at 9:00 on Sundays Tourism, accommodation facilities, camping site management. and national holidays),Restaurant is open 11:00~13:30 Wednesdays (Open on national holidays) Hot spring, accommodation, restaurant, food, parties http://www.go-rakan.jp/ A. -
San'in Sanyo Guide Book
San'in Sanyo guide book www.into-you.jp www.jnto.go.jp 利用 JR 西日本的 RAIL PASS 巡遊 5 縣! Yonago Airport Yonago-airport Sakaiminato sta. sta. From Kansai International Airport Matsue Tottori sta. San-in Line sta. Yonago to Shin-Osaka sta. Lake Shinji sta. Mizuki Shigeru Museum Izumo Taisha Grand Shrine Kurayoshi sta. Yasugi sta. Train Approx. 50 min. by JR Kansai-Airport Izumoshi sta. Chizukyuko Line Express “Haruka” ¥2,330 Odashi sta. Imbi Line Bus & Train Tsuyama sta. Gotsu sta. By limousine bus to Osaka sta. (approx. 70 min., ¥1,550). By JR Kyoto Line sta. from Tottori Sand Dunes Hakubi Line Kishin Line Osaka sta. to Shin-Osaka sta. (3 min., ¥160) Hamada sta. Here are easy-to-follow routes from Kansai Niimi sta. Tsuyama Line Himeji sta. International Airport and Fukuoka Airport Miyoshi sta. San-yo Line Masuda sta. Okayama ShinkansenSanyo Shin-Kobe sta. San-in Line Airport Kibitsu sta. Aioi sta. Akiyoshido Cave Shin-Osaka sta. Geibi Line Shin-Kurashiki sta. Okayama sta. Shin- Higashi-Hagi Higashihiroshima sta. Onomichi Nishi-Akashi sta. sta. sta. Hiroshima sta. Kurashiki sta. From Fukuoka Airport to Nagatoshi sta. Hakata sta. Fukuyama sta. Kojima sta. Kansai-airport sta. Kansai International Airport Yamaguchi sta. Mihara Onomichi sta. Yamaguchi Line Shin- sta. Shin- Iwakuni sta. Miyajimaguchi sta. Approx. 5 min. by Fukuoka Yamaguchi sta. Subway Kuko Line ¥260 Shin- Shimonoseki Sanyo Shinkansen Iwakuni sta. Hiroshima Airport sta. Shimonoseki Asa sta. Approx. 18 min. by sta. Tokuyama sta. Nishitetsu Bus ¥260 San-yo Line Kokura sta. Okayama Korakuen Garden • Okayama Castle Kurashiki Bikan Historical Quarter Onomichi Kintai-kyo Bridge Miyajima Hakata sta. -
Evaluation of Biodiversity in Estuaries Using Environmental DNA Metabarcoding
bioRxiv preprint doi: https://doi.org/10.1101/2020.03.22.997809; this version posted March 25, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Evaluation of biodiversity in estuaries using environmental DNA metabarcoding 2 (Short title: Biodiversity of five estuaries) 3 4 5 Hyojin Ahn1,2*, Manabu Kume1, Yuki Terashima1, Feng Ye1,3, Satoshi Kameyama3, Masaki 6 Miya4, Yoh Yamashita1, Akihide Kasai2 7 8 9 1Connectivity of Hills, Humans and Oceans Unit, Kyoto University, Oiwake, 10 Kitashirakawa, Sakyo, Kyoto, Japan 11 2Faculty of Fisheries Sciences, Hokkaido University, Minatocho, Hakodate, Hokkaido, 12 Japan 13 3Center for Environmental Biology and Ecosystem, National Institute for Environmental 14 Studies, Onogawa, Tsukuba, Ibaraki, Japan 15 4Department of Ecology and Environmental Sciences, National History Museum and 16 Institute, Aobacho, Chuo, Chiba, Japan 17 18 19 *Corresponding author 20 E-mail: [email protected] 21 22 23 24 25 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.03.22.997809; this version posted March 25, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 26 Funding 27 This study was conducted under the Link Again Program, part of Connectivity of Hills, 28 Humans and Oceans, funded by the Nippon Foundation, attained by YY. The funder had no 29 role in study design, data collection and analysis, decision to publish, or preparation of the 30 manuscript. -
A Rare Freshwater Goby Odontobutis Hikimius Collected from the Nishiki
Biogeography 14. 19-24. Sep. 20, 2012 A rare freshwater goby Odontobutis hikimius collected from the Nishiki River flowing down the southern slope of the drainage divide opposite to the Takatsu River, the type locality Harumi Sakae*, Toshihiro Hatama2 and Akihisa Iwata3 I Department of Aquabiology, National Fisheries University, 2-7-1 Nagata-Honmachi, Shimonoseki, Yamaguchi, 759-6595 Japan 2 Inland Sea Research Division, Yamaguchi Prefectural Fisheries Research Center, 437-77 Aio-Futashima, Yamaguchi, Yamaguchi, 754-0893 Japan 3 Graduate School of Asian and African Area Studies, Kyoto University, Yoshida-Honmachi, Sakyo-ku, Kyoto, 606-8501 Japan Abstract. A rare freshwater goby Odontobutis hikimius Iwata & Sakai, 2002 was collected from the Nishiki River flowing into the Seta Inland Sea. The species was described based on specimens from three rivers flow- ing into the Sea of Japan, the Takatsu, Tama, and Masuda Rivers, as an endemically distributed new species. The Nishiki River flows the southern slope of the drainage divide opposite to the Takatsu River. It is thought that the Fukatani River that was a tributary of the Takatsu River has become a tributary of the Nishiki River due to a stream capture event. Following this event Odontobutis hikimius possibly immigrated to the Nishiki River system from the Takatsu River system. Key words: freshwater goby, Odontobutis hikimius, new locality, stream capture, immigration, morphology Introduction Specimens collected from the Nishiki River are identified with O. hikimius morphologically (Fig. 1). An endemic rare freshwater goby Odontobutis The Nishiki River flows on the opposite slope of the hikimius Iwata & Sakai, 2002 was described as a drainage divide to the Takatsu River and goes into the new species based on specimens collected from three Seto Inland Sea (Fig.