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Ctenophore Relationships and Their Placement As the Sister Group to All Other Animals
ARTICLES DOI: 10.1038/s41559-017-0331-3 Ctenophore relationships and their placement as the sister group to all other animals Nathan V. Whelan 1,2*, Kevin M. Kocot3, Tatiana P. Moroz4, Krishanu Mukherjee4, Peter Williams4, Gustav Paulay5, Leonid L. Moroz 4,6* and Kenneth M. Halanych 1* Ctenophora, comprising approximately 200 described species, is an important lineage for understanding metazoan evolution and is of great ecological and economic importance. Ctenophore diversity includes species with unique colloblasts used for prey capture, smooth and striated muscles, benthic and pelagic lifestyles, and locomotion with ciliated paddles or muscular propul- sion. However, the ancestral states of traits are debated and relationships among many lineages are unresolved. Here, using 27 newly sequenced ctenophore transcriptomes, publicly available data and methods to control systematic error, we establish the placement of Ctenophora as the sister group to all other animals and refine the phylogenetic relationships within ctenophores. Molecular clock analyses suggest modern ctenophore diversity originated approximately 350 million years ago ± 88 million years, conflicting with previous hypotheses, which suggest it originated approximately 65 million years ago. We recover Euplokamis dunlapae—a species with striated muscles—as the sister lineage to other sampled ctenophores. Ancestral state reconstruction shows that the most recent common ancestor of extant ctenophores was pelagic, possessed tentacles, was bio- luminescent and did not have separate sexes. Our results imply at least two transitions from a pelagic to benthic lifestyle within Ctenophora, suggesting that such transitions were more common in animal diversification than previously thought. tenophores, or comb jellies, have successfully colonized from species across most of the known phylogenetic diversity of nearly every marine environment and can be key species in Ctenophora. -
Title BOLINOPSIS RUBRIPUNCTATA N. SP., a NEW LOBATEAN
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Kyoto University Research Information Repository BOLINOPSIS RUBRIPUNCTATA N. SP., A NEW Title LOBATEAN CTENOPHORE FROM SETO Author(s) Tokioka, Takasi PUBLICATIONS OF THE SETO MARINE BIOLOGICAL Citation LABORATORY (1964), 12(1): 93-99 Issue Date 1964-06-30 URL http://hdl.handle.net/2433/175350 Right Type Departmental Bulletin Paper Textversion publisher Kyoto University BOLINOPSIS RUBRIPUNCTATA N. SP., A NEW LOBATEAN CTENOPHORE FROM SETO l) TAKAS! TOKIOKA Seto Marine Biological Laboratory With 3 Text-figures On the early afternoon of January 6 this year Mr. Torao YAMAMOTO brought me a perfect living Cyanea nozakii KrsHINOUYE of a medium-size caught inside the wharf at the fishing port of Seto about 1 km east of the laboratory and told me that many ctenophores were gathered near the northwest corner of the port together with some cyaneas. In a hope to get another good specimen of Cyanea or to find out some interesting medusae, I followed him to the port by bicycle and made a close observation there. The swarm there formed was composed mainly of Bolinopsis mikado (MosER), a significant number of Ocyropsis fusca RANG and some of Leucothea japonica KoMAr, Cestum amphitrites MERTENS and Beroe cucumis FABRICIUS, besides a considerable amount of Noctiluca and some hydromedusae. Among those ctenophores I found two specimens of a lobatean of a moderate size which were respectively marked distinctly with scarlet lines and large bright red spots up to about 15 in number. One of them was caught by bucket and the other by polyethylene bag, and then both specimens were carried to the laboratory on foot. -
The Ctenophore Mnemiopsis Leidyi A. Agassiz 1865 in Coastal Waters of the Netherlands: an Unrecognized Invasion?
Aquatic Invasions (2006) Volume 1, Issue 4: 270-277 DOI 10.3391/ai.2006.1.4.10 © 2006 The Author(s) Journal compilation © 2006 REABIC (http://www.reabic.net) This is an Open Access article Research article The ctenophore Mnemiopsis leidyi A. Agassiz 1865 in coastal waters of the Netherlands: an unrecognized invasion? Marco A. Faasse1 and Keith M. Bayha2* 1National Museum of Natural History Naturalis, P.O.Box 9517, 2300 RA Leiden, The Netherlands E-mail: [email protected] 2Dauphin Island Sea Lab, 101 Bienville Blvd., Dauphin Island, AL, 36528, USA E-mail: [email protected] *Corresponding author Received 3 December 2006; accepted in revised form 11 December 2006 Abstract The introduction of the American ctenophore Mnemiopsis leidyi to the Black Sea was one of the most dramatic of all marine bioinvasions and, in combination with eutrophication and overfishing, resulted in a total reorganization of the pelagic food web and significant economic losses. Given the impacts this animal has exhibited in its invaded habitats, the spread of this ctenophore to additional regions has been a topic of much consternation. Here, we show the presence of this invader in estuaries along the Netherlands coast, based both on morphological observation and molecular evidence (nuclear internal transcribed spacer region 1 [ITS-1] sequence). Furthermore, we suggest the possibility that this ctenophore may have been present in Dutch waters for several years, having been misidentified as the morphologically similar Bolinopsis infundibulum. Given the level of shipping activity in nearby ports (e.g. Antwerp and Rotterdam), we find it likely that M. leidyi found its way to the Dutch coast in the ballast water of cargo ships, as is thought for Mnemiopsis in the Black and Caspian Seas. -
Escape of the Ctenophore Mnemiopsis Leidyi from the Scyphomedusa Predator Chrysaora Quinquecirrha
Marine Biology (1997) 128: 441–446 Springer-Verlag 1997 T. A. Kreps · J. E. Purcell · K. B. Heidelberg Escape of the ctenophore Mnemiopsis leidyi from the scyphomedusa predator Chrysaora quinquecirrha Received: 14 November 1996 / Accepted: 4 December 1996 Abstract The ctenophore Mnemiopsis leidyi A. Agassiz, bay, and effects of medusa predation on ctenophore 1865 is known to be eaten by the scyphomedusan populations could be seen at lower trophic levels (Fe- Chrysaora quinquecirrha (Desor, 1948), which can con- igenbaum and Kelly 1984; Purcell and Cowan 1995). trol populations of ctenophores in the tributaries of Recently, Purcell and Cowan (1995) documented that Chesapeake Bay. In the summer of 1995, we videotaped Mnemiopsis leidyi may occur in situ with one or both interactions in large aquaria in order to determine lobes reduced in size by 80% or more. Lobe reduction whether M. leidyi was always captured after contact was not caused by starvation, and other predators ap- with medusae. Surprisingly, M. leidyi escaped in 97.2% parently were absent. In laboratory experiments, small of 143 contacts. The ctenophores increased swimming Chrysaora quinquecirrha (≤20 mm diameter) partially speed by an average of 300% immediately after contact consumed small ctenophores (≤20 mm in length) that with tentacles and 600% by mid-escape. When caught in were larger than themselves. Therefore, Purcell and the tentacles of C. quinquecirrha, the ctenophores fre- Cowan (1995) concluded that the short-lobed condition quently lost a portion of their body, which allowed them was caused by C. quinquecirrha partially consuming the to escape. Lost parts regenerated within a few days. -
Running Head: B. ABYSSICOLA PATTERNS of PREDATION 1
Running head: B. ABYSSICOLA PATTERNS OF PREDATION 1 Beroe abyssicola Patterns of Predation: A Behavioral Analysis Jacob L. Beemer1 FHL 470 1Friday Harbor Laboratories, University of Washington, Friday Harbor, WA 98250 Contact information: Jacob Beemer Marine Biology Department University of Washington 620 University Road Friday Harbor, WA 98250 [email protected] B. ABYSSICOLA PATTERNS OF PREDATION 2 Abstract Ctenophores play an important role in many marine ecosystems worldwide and affect multiple trophic levels. They consume large amounts of plankton while, in turn, are also consumed by fish. Beroe abyssicola is a carnivorous ctenophore that preys upon Bolinopsis infundibulum, a planktivorous carnivore. While many studies exist on the feeding behaviors of other ctenophore genera, research on the genus Beroe is lacking. This study aimed to discern the patterns of predatory behavior of B. abyssicola and found that size was a significant factor in feeding behavior. We also tested whether seawater conditioned with the chemical signature of B. infundibulum would cause a change in the behavior of B. abyssicola but found no significant effect. Lastly, we tested whether B. abyssicola would consume a species of Pleurobrachia but found no evidence for this. B. ABYSSICOLA PATTERNS OF PREDATION 3 Introduction Pelagic and nearshore trophic systems are highly variable both temporally and spatially. Within these environments, certain groups of organisms create limits on population size which, left unchecked, could shift the ecological balance (Kozloff 1990). One such animal is Bolinopsis infundibulum, a planktivorous ctenophore. This species goes through annual cycles of population growth followed by rapid decline, consuming large amounts of copepods in the interim (Båmstedt & Martinussen 2015). -
The Sound Biodiversity, Threats, and Transboundary Protection.Indd
2017 The Sound: Biodiversity, threats, and transboundary protection 2 Windmills near Copenhagen. Denmark. © OCEANA/ Carlos Minguell Credits & Acknowledgments Authors: Allison L. Perry, Hanna Paulomäki, Tore Hejl Holm Hansen, Jorge Blanco Editor: Marta Madina Editorial Assistant: Ángeles Sáez Design and layout: NEO Estudio Gráfico, S.L. Cover photo: Oceana diver under a wind generator, swimming over algae and mussels. Lillgrund, south of Øresund Bridge, Sweden. © OCEANA/ Carlos Suárez Recommended citation: Perry, A.L, Paulomäki, H., Holm-Hansen, T.H., and Blanco, J. 2017. The Sound: Biodiversity, threats, and transboundary protection. Oceana, Madrid: 72 pp. Reproduction of the information gathered in this report is permitted as long as © OCEANA is cited as the source. Acknowledgements This project was made possible thanks to the generous support of Svenska PostkodStiftelsen (the Swedish Postcode Foundation). We gratefully acknowledge the following people who advised us, provided data, participated in the research expedition, attended the October 2016 stakeholder gathering, or provided other support during the project: Lars Anker Angantyr (The Sound Water Cooperation), Kjell Andersson, Karin Bergendal (Swedish Society for Nature Conservation, Malmö/Skåne), Annelie Brand (Environment Department, Helsingborg municipality), Henrik Carl (Fiskeatlas), Magnus Danbolt, Magnus Eckeskog (Greenpeace), Søren Jacobsen (Association for Sensible Coastal Fishing), Jens Peder Jeppesen (The Sound Aquarium), Sven Bertil Johnson (The Sound Fund), Markus Lundgren -
Zooplankton of the Baltic Sea
Irena Telesh, Sergei Skarlato, Sandra Kube, Henning Rohde and Hendrik Schubert Zooplankton of the Baltic Sea: Introduction to the Distant Learning Module Rostock & St. Petersburg 2015 Irena Telesh Zoological Institute of the Russian Academy of Sciences, Institute of Cytology of the Russian Academy of Sciences, St. Petersburg, Russia Sergei Skarlato Institute of Cytology of the Russian Academy of Sciences, St. Petersburg, Russia Sandra Kube Leibniz-Institute for Baltic Sea Research Warnemünde, Rostock, Germany Henning Rohde Aquatic Ecology, University of Rostock, Rostock, Germany Hendrik Schubert Aquatic Ecology, University of Rostock, Rostock, Germany Front cover illustrations: Upper panel: left picture: Bosmina longirostris (photo courtesy of L. Postel); middle picture: Keratella quadrata (photo courtesy of P. Snoeijs Leijonmalm); right picture: Pseudocalanus elongatus (photo courtesy of P. Snoeijs Leijonmalm). Middle panel: left picture: Temora longicornis, female (photo courtesy of L. Postel); middle picture: Synchaeta sp. (photo courtesy of H. Sandberg); right picture: Podon leuckarti (photo courtesy of L. Postel). Lower panel: left picture: above – Bosmina longirostris, below – planktonic larvae of a bivalve mollusk (photo courtesy of P. Snoeijs Leijonmalm); middle picture: Eurytemora affinis, female (photo courtesy of L. Postel); right picture: Evadne nordmanni, female with a resting egg (photo courtesy of H. Sandberg). © Universität Rostock, 18051 Rostock This book is the first printed edition of the guiding material for the online-based Zooplankton Distant Learning Module, developed in collaboration between Russian and German scientists in the framework of the “Ulrich Schiewer Laboratory for Experimental Aquatic Ecology” (USELab). ISBN 978-3-860009-441-9 Rostock & St. Petersburg 2015 Preface Zooplankton is an important biotic component of aquatic ecosystems. -
First Record of Mnemiopsis Leidyi A. Agassiz 1865 in the Baltic Sea
Aquatic Invasions (2006) Volume 1, Issue 4: 299-302 DOI 10.3391/ai.2006.1.4.17 © 2006 The Author(s) Journal compilation © 2006 REABIC (http://www.reabic.net) This is an Open Access article Short communication First record of Mnemiopsis leidyi A. Agassiz 1865 in the Baltic Sea Jamileh Javidpour1, Ulrich Sommer1 and Tamara Shiganova2* 1Leibniz-Institute of Marine Sciences, Düsternbrooker Weg 20, 24105 Kiel, Germany E-mail: [email protected] 2P.P.Shirshov Institute of Oceanology RAS, Nakhimovsky avenue, 36, 117997 Moscow, Russia E-mail: [email protected] *Corresponding author Received 9 December 2006; accepted in revised form 14 December 2006 Abstract The invasive ctenophore Mnemiopsis leidyi was first recorded in the Kiel Bight (western Baltic Sea) on 17 October 2006 during a regular weekly sampling program. The M. leidyi abundance gradually increased from 29.5±12.7 ind.m-3 in mid-October to 92.3±22.4 ind.m-3 in late November 2006. The occurrence of M. leidyi in the Baltic Sea is of great concern as this invader has caused negative impacts in the southern seas of Europe. Key words: ctenophores, alien species, Mnemiopsis leidyi, Bolinopsis infundibulum, ballast water, first record The ctenophore Mnemiopsis leidyi A. Agassiz oligotrophic Aegean Sea (Shiganova et al. 2001, 1865 was introduced into the Black Sea in the Shiganova et al. 2004a, b). 1980s (Vinogradov et al. 1989). It showed an M. leidyi has not been observed along western explosive mass development there since 1988 and northern European waters until recently, and expanded to the Azov, Marmara, and eastern although its wide tolerance to salinity (4-38‰) Mediterranean Seas and in 1999 it was and temperature (4-32°C) (reviewed in introduced into the Caspian Sea likely with GESAMP, 1997) make most of the Baltic Sea a ballast water of oil tankers (Studenikina et al. -
Revisiting the Phylogeny of Phylum Ctenophora: a Molecular Perspective [Version 1; Referees: 1 Approved with Reservations, 3 Not Approved] Luis A
F1000Research 2016, 5:2881 Last updated: 03 APR 2017 RESEARCH NOTE Revisiting the phylogeny of phylum Ctenophora: a molecular perspective [version 1; referees: 1 approved with reservations, 3 not approved] Luis A. Arteaga-Figueroa1, Valentina Sánchez-Bermúdez1, Nicolás D. Franco-Sierra 1-3 1Semillero de Biologıa Computacional, Departamento de Ciencias Biologicas, Escuela de Ciencias, Universidad EAFIT, Medellin, Colombia 2Grupo CIBIOP (Ciencias Biologicas y Bioprocesos), Departamento de Ciencias Biologicas, Escuela de Ciencias, Universidad EAFIT, Medellin, Colombia 3Grupo BEC (Biodiversidad, Evolucion y Conservacion), Departamento de Ciencias Biologicas, Escuela de Ciencias, Universidad EAFIT, Medellın, Colombia v1 First published: 20 Dec 2016, 5:2881 (doi: 10.12688/f1000research.10426.1) Open Peer Review Latest published: 20 Dec 2016, 5:2881 (doi: 10.12688/f1000research.10426.1) Referee Status: Abstract The phylogenetic relationships of deep metazoans, specifically in the phylum Ctenophora, are not totally understood. Previous studies have been developed Invited Referees on this subject, mostly based on morphology and single gene analyses (rRNA 1 2 3 4 sequences). Several loci (protein coding and ribosomal RNA) from taxa belonging to this phylum are currently available on public databases (e.g. version 1 GenBank). Here we revisit Ctenophora molecular phylogeny using public published report report report report sequences and probabilistic methods (Bayesian inference and maximum 20 Dec 2016 likelihood). To get more reliable results multi-locus analyses were performed using 5.8S, 28S, ITS1, ITS2 and 18S, and IPNS and GFP-like proteins. Best Martin Dohrmann, topologies, consistent with both methods for each data set, are shown and 1 analysed. Comparing the results of the pylogenetic reconstruction with previous Ludwig-Maximilians-Universität München research, most clades showed the same relationships as the ones found with Germany morphology and single gene analyses, consistent with hypotheses made in Steven H.D. -
Ctenophora) and a Hydromedusa (Cnidaria)
DISEASES OF AQUATIC ORGANISMS Published May 8 Dis. aquat. Org. Ectoparasitism by a dinoflagellate (Dinoflagellata: Oodinidae) on 5 ctenophores (Ctenophora) and a hydromedusa (Cnidaria) Claudia E. Mills1,Norman Mc~ean',~ ' Friday Harbor Laboratories, University of Washington, 620 University Road, Friday Harbor, Washington 98250, USA Department of Biology, San Diego State University, San Diego, California 92182-0057, USA ABSTRACT: Oodiniurn sp., an ectoparasitic oodinid dinoflagellate that closely resembles Oodinium jordani McLean & Nielsen, 1989 described from Sagitta elegans Verrill, 1873 (Phylum Chaetognatha), has been seen to parasitize Beroe abyssjcola Mortensen, 1927, Bolinopsis ?infundibulum (0.F. Miiller, 1776), Euplokamis dunlapae Mills, 1987, Dryodora glandiformis (Mertens, 1833), and Pleurobrachia bachei A. Agassiz, 1860, which represent 3 orders of the phylum Ctenophora, and the hydromedusa Euphysa sp. (phylum Cnidaria) in marine waters of the San Juan Archipelago, Washington State, USA. Up to several hundred trophozoites may be found on a single ctenophore, although most ctenophore hosts carry less than 50; the hydromedusa never carried more than 4. The parasites occurred on their ctenophore and medusan hosts from late October through early April, and not in the warmer months. These are the first reported instances of parasitism by a dinoflagellate on the Ctenophora, and by an Oodinium on the Cnidaria. INTRODUCTION kamis dunlapae Mills, 1987, Dryodora glandiformis (Mertens, 1833), Pleurobrachia bachei A. Agassiz, A recent study (McLean & Nielsen 1989) described 1860, Euphysa sp., and (for comparison) Sagitta ele- Oodinium jordani, a new species of oodinid dinoflagel- gans Verrill, 1873, were hand-collected in beakers from late ectoparasitic on a member of the phylum Chaeto- the floating docks of the Friday Harbor Laboratories, gnatha from northwest Washington State, USA. -
Maya Nabipoor, Stacia Krause Ledbetter, Erik Thuesen A
Ecophysiology of Ctenophora: Biochemical Analysis Maya Nabipoor, Stacia Krause Ledbetter, Erik Thuesen The Evergreen State College, Olympia, WA INTRODUCTION BIOCHEMICAL ANALYSES CONT’D. These Summer Undergraduate Research Fellowships, entitled ‘Ecophysiol- DEEPC collaborators at the Monterey Bay Aquarium Research Institute ogy of Ctenophores’, focused on supporting the DEEPC project, that is cloned pyruvate kinase (PK) from two ctenophore species, Beroe forskalii funded by the National Science Foundation. DEEPC is seeking to under- and Beroe abyssicola, which are closely related shallow- and deep-living stand the phylogenetic diversity, genetic diversity, and functional diversity of species, respectively. These cloned enzymes were analyzed at The ctenophores, also known as comb jellies. Evergreen State College using a high pressure cuvette system to characterize PK under 3 different hydrostatic pressures (1, 200, and 400 The phylum Ctenophora is comprised of gelatinous marine invertebrates B atm). that utilize rows of cilia called combs to swim. They are the largest species A of animal to move via ciliary action. Evolutionary evidence suggests cteno- The SURF students also worked with a visiting scientist from Argentina, phores were the first group of animals to split away from all other animals Esteban Paolucci, Ph.D., to measure enzymatic activities in the invasive and are even older than sponges. Extant species of ctenophores occupy New Zealand mud snail collected from Capitol Lake. oceans worldwide at a variety of depths and habitats. Transitions to life in the deep sea require adaptations in the genetic code to maintain the struc- ture and function of proteins. In this project, ctenophore enzymes were characterized from both distant and closely related ctenophore species that live in shallow waters and deep environments. -
Chemical Composition and Oxygen Consumption Rates of Ctenophore Bolinopsis Infundibulum from the Gulf of Maine
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1994 Oxford University Press. This is an electronic version of an article published in Journal of Plankton Research, http://plankt.oxfordjournals.org/, and may be cited as: Bailey, T. G., Youngbluth, M. J., & Owen, G. P. (1994). Chemical composition and oxygen consumption rates of ctenophore Bolinopsis infundibulum from the Gulf of Maine. Journal of Plankton Research, 16(6), 673- 689. doi:10.1093/plankt/16.6.673 ~ "\J~ Journal of Plankton Research Vol. 16 no.6 pp.673-6g9. 199.+ \ Chemical composition and oxygen consumption rates of the ctenophore Bolinopsis infundibulum from the Gulf of Maine TG.Bailey, M.J.Youngbluth and G.P.Owen Harbor Branch Oceanographic Institution, 5600 U.S. I North, Fort Pierce, FL 34946, USA Abstract. Quantitative determinations of chemical composition and oxygen consumption rates were made for a deep-living population of the lobate ctenophore Bolinopsis infundibulum. Animals were collected in the Gulf of Maine with the submersible 'Johnson-Sea-Link' during September 1999 at depths ranging from 120 to 240 m. Carbon and nitrogen contents were similar to values reported for cpipelagic ctenophores. Lipid and protein levels were lower than values typical of epipelagic ctenophores, hut higher than those of mesopelagic species. Carbohydrate was nearly an order of magnitude higher than previously recorded for B.infundihulum. Oxygen consumption rates ranged from 0.004 to 0.215 u.l 0, mg -I dry weight h-I at temperatures ranging from 5 to 7°C.