Risk and Precaution Salmon Farming
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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Fish and Fishery Products Hazards and Controls Guidance Fourth Edition – APRIL 2011
SGR 129 Fish and Fishery Products Hazards and Controls Guidance Fourth Edition – APRIL 2011 DEPARTMENT OF HEALTH AND HUMAN SERVICES PUBLIC HEALTH SERVICE FOOD AND DRUG ADMINISTRATION CENTER FOR FOOD SAFETY AND APPLIED NUTRITION OFFICE OF FOOD SAFETY Fish and Fishery Products Hazards and Controls Guidance Fourth Edition – April 2011 Additional copies may be purchased from: Florida Sea Grant IFAS - Extension Bookstore University of Florida P.O. Box 110011 Gainesville, FL 32611-0011 (800) 226-1764 Or www.ifasbooks.com Or you may download a copy from: http://www.fda.gov/FoodGuidances You may submit electronic or written comments regarding this guidance at any time. Submit electronic comments to http://www.regulations. gov. Submit written comments to the Division of Dockets Management (HFA-305), Food and Drug Administration, 5630 Fishers Lane, Rm. 1061, Rockville, MD 20852. All comments should be identified with the docket number listed in the notice of availability that publishes in the Federal Register. U.S. Department of Health and Human Services Food and Drug Administration Center for Food Safety and Applied Nutrition (240) 402-2300 April 2011 Table of Contents: Fish and Fishery Products Hazards and Controls Guidance • Guidance for the Industry: Fish and Fishery Products Hazards and Controls Guidance ................................ 1 • CHAPTER 1: General Information .......................................................................................................19 • CHAPTER 2: Conducting a Hazard Analysis and Developing a HACCP Plan -
Twenty Thousand Parasites Under The
ADVERTIMENT. Lʼaccés als continguts dʼaquesta tesi queda condicionat a lʼacceptació de les condicions dʼús establertes per la següent llicència Creative Commons: http://cat.creativecommons.org/?page_id=184 ADVERTENCIA. El acceso a los contenidos de esta tesis queda condicionado a la aceptación de las condiciones de uso establecidas por la siguiente licencia Creative Commons: http://es.creativecommons.org/blog/licencias/ WARNING. The access to the contents of this doctoral thesis it is limited to the acceptance of the use conditions set by the following Creative Commons license: https://creativecommons.org/licenses/?lang=en Departament de Biologia Animal, Biologia Vegetal i Ecologia Tesis Doctoral Twenty thousand parasites under the sea: a multidisciplinary approach to parasite communities of deep-dwelling fishes from the slopes of the Balearic Sea (NW Mediterranean) Tesis doctoral presentada por Sara Maria Dallarés Villar para optar al título de Doctora en Acuicultura bajo la dirección de la Dra. Maite Carrassón López de Letona, del Dr. Francesc Padrós Bover y de la Dra. Montserrat Solé Rovira. La presente tesis se ha inscrito en el programa de doctorado en Acuicultura, con mención de calidad, de la Universitat Autònoma de Barcelona. Los directores Maite Carrassón Francesc Padrós Montserrat Solé López de Letona Bover Rovira Universitat Autònoma de Universitat Autònoma de Institut de Ciències Barcelona Barcelona del Mar (CSIC) La tutora La doctoranda Maite Carrassón Sara Maria López de Letona Dallarés Villar Universitat Autònoma de Barcelona Bellaterra, diciembre de 2016 ACKNOWLEDGEMENTS Cuando miro atrás, al comienzo de esta tesis, me doy cuenta de cuán enriquecedora e importante ha sido para mí esta etapa, a todos los niveles. -
Salmon Aquaculture Dialogue Working Group Report on Salmon Disease
Salmon Aquaculture Dialogue Working Group Report on Salmon Disease Larry Hammell - Atlantic Veterinary College, University of Prince Edward Island, Canada Craig Stephen- Centre for Coastal Health, University of Calgary, Canada Ian Bricknell- School of Marine Sciences, University of Maine, USA Øystein Evensen- Norwegian School of Veterinary Medicine, Oslo, Norway Patricio Bustos- ADL Diagnostic Chile Ltda., Chile With Contributions by: Ricardo Enriquez- University of Austral, Chile 1 Citation: Hammell, L., Stephen, C., Bricknell, I., Evensen Ø., and P. Bustos. 2009 “Salmon Aquaculture Dialogue Working Group Report on Salmon Disease” commissioned by the Salmon Aquaculture Dialogue, available at http://wwf.worldwildlife.org/site/PageNavigator/SalmonSOIForm Corresponding author: Larry Hammell, email: [email protected] This report was commissioned by the Salmon Aquaculture Dialogue. The Salmon Dialogue is a multi-stakeholder, multi-national group which was initiated by the World Wildlife Fund in 2004. Participants include salmon producers and other members of the market chain, NGOs, researchers, retailers, and government officials from major salmon producing and consuming countries. The goal of the Dialogue is to credibly develop and support the implementation of measurable, performance-based standards that minimize or eliminate the key negative environmental and social impacts of salmon farming, while permitting the industry to remain economically viable The Salmon Aquaculture Dialogue focuses their research and standard development on seven key areas of impact of salmon production including: social; feed; disease; salmon escapes; chemical inputs; benthic impacts and siting; and, nutrient loading and carrying capacity. Funding for this report and other Salmon Aquaculture Dialogue supported work is provided by the members of the Dialogue‘s steering committee and their donors. -
Mote Marine Laboratory Red Tide Studies
MOTE MARINE LABORATORY RED TIDE STUDIES FINAL REPORT FL DEP Contract MR 042 July 11, 1994 - June 30, 1995 Submitted To: Dr. Karen Steidinger Florida Marine Research Institute FL DEPARTMENT OF ENVIRONMENTAL PROTECTION 100 Eighth Street South East St. Petersburg, FL 33701-3093 Submitted By: Dr. Richard H. Pierce Director of Research MOTE MARINE LABORATORY 1600 Thompson Parkway Sarasota, FL 34236 Mote Marine Laboratory Technical Report No. 429 June 20, 1995 This document is printed on recycled paper Suggested reference Pierce RH. 1995. Mote Marine Red Tide Studies July 11, 1994 - June 30, 1995. Florida Department of Environmental Pro- tection. Contract no MR 042. Mote Marine Lab- oratory Technical Report no 429. 64 p. Available from: Mote Marine Laboratory Library. TABLE OF CONTENTS I. SUMMARY. 1 II. CULTURE MAINTENANCE AND GROWTH STUDIES . 1 Ill. ECOLOGICAL INTERACTION STUDIES . 2 A. Brevetoxin Ingestion in Black Seabass B. Evaluation of Food Carriers C. First Long Term (14 Day) Clam Exposure With Depuration (2/6/95) D. Second Long Term (14 Day) Clam Exposure (3/21/95) IV. RED TIDE FIELD STUDIES . 24 A. 1994 Red Tide Bloom (9/16/94 - 1/4/95) B. Red Tide Bloom (4/13/94 - 6/16/95) C. Red Tide Pigment D. Bacteriological Studies E. Brevetoxin Analysis in Marine Organisms Exposed to Sublethal Levels of the 1994 Natural Red Tide Bloom V. REFERENCES . 61 Tables Table 1. Monthly Combined Production and Use of Laboratory C. breve Culture. ....... 2 Table 2. Brevetoxin Concentration in Brevetoxin Spiked Shrimp and in Black Seabass Muscle Tissue and Digestive Tract Following Ingestion of the Shrimp ............... -
Catching the Complexity of Salmon-Louse Interactions
Fish and Shellfish Immunology 90 (2019) 199–209 Contents lists available at ScienceDirect Fish and Shellfish Immunology journal homepage: www.elsevier.com/locate/fsi Full length article Catching the complexity of salmon-louse interactions T ∗ Cristian Gallardo-Escáratea, , Valentina Valenzuela-Muñoza, Gustavo Núñez-Acuñaa, Crisleri Carreraa, Ana Teresa Gonçalvesa, Diego Valenzuela-Mirandaa, Bárbara P. Benaventea, Steven Robertsb a Interdisciplinary Center for Aquaculture Research, Laboratory of Biotechnology and Aquatic Genomics, Department of Oceanography, Universidad de Concepción, Concepción, Chile b School of Aquatic and Fishery Sciences (SAFS), University of Washington, Seattle, USA ABSTRACT The study of host-parasite relationships is an integral part of the immunology of aquatic species, where the complexity of both organisms has to be overlayed with the lifecycle stages of the parasite and immunological status of the host. A deep understanding of how the parasite survives in its host and how they display molecular mechanisms to face the immune system can be applied for novel parasite control strategies. This review highlights current knowledge about salmon and sea louse, two key aquatic animals for aquaculture research worldwide. With the aim to catch the complexity of the salmon-louse interactions, molecular information gleaned through genomic studies are presented. The host recognition system and the chemosensory receptors found in sea lice reveal complex molecular components, that in turn, can be disrupted through specific molecules such as non-coding RNAs. 1. Introduction worldwide the most studied sea lice species are Lepeophtheirus salmonis and Caligus rogercresseyi [8–10]. Annually the salmon industry presents Host-parasite interactions are a complex relationship where one estimated losses of US $ 480 million, representing between 4 and 10% organism benefits the other and often where there is a negative impact of production costs [10]. -
The Florida Red Tide Dinoflagellate Karenia Brevis
G Model HARALG-488; No of Pages 11 Harmful Algae xxx (2009) xxx–xxx Contents lists available at ScienceDirect Harmful Algae journal homepage: www.elsevier.com/locate/hal Review The Florida red tide dinoflagellate Karenia brevis: New insights into cellular and molecular processes underlying bloom dynamics Frances M. Van Dolah a,*, Kristy B. Lidie a, Emily A. Monroe a, Debashish Bhattacharya b, Lisa Campbell c, Gregory J. Doucette a, Daniel Kamykowski d a Marine Biotoxins Program, NOAA Center for Coastal Environmental Health and Biomolecular Resarch, Charleston, SC, United States b Department of Biological Sciences and Roy J. Carver Center for Comparative Genomics, University of Iowa, Iowa City, IA, United States c Department of Oceanography, Texas A&M University, College Station, TX, United States d Department of Marine, Earth and Atmospheric Sciences, North Carolina State University, Raleigh, NC, United States ARTICLE INFO ABSTRACT Article history: The dinoflagellate Karenia brevis is responsible for nearly annual red tides in the Gulf of Mexico that Available online xxx cause extensive marine mortalities and human illness due to the production of brevetoxins. Although the mechanisms regulating its bloom dynamics and toxicity have received considerable attention, Keywords: investigation into these processes at the cellular and molecular level has only begun in earnest during Bacterial–algal interactions the past decade. This review provides an overview of the recent advances in our understanding of the Cell cycle cellular and molecular biology on K. brevis. Several molecular resources developed for K. brevis, including Dinoflagellate cDNA and genomic DNA libraries, DNA microarrays, metagenomic libraries, and probes for population Florida red tide genetics, have revolutionized our ability to investigate fundamental questions about K. -
Piscirickettsia Salmonis and the Sea Louse Caligus Rogercresseyi
Disease Resistance in Atlantic Salmon (Salmo salar): Coinfection of the Intracellular Bacterial Pathogen Piscirickettsia salmonis and the Sea Louse Caligus rogercresseyi Jean Paul Lhorente1, Jose´ A. Gallardo2*, Beatriz Villanueva3, Marı´a J. Caraban˜ o3, Roberto Neira1,4 1 Aquainnovo S.A, Puerto Montt, Chile, 2 Pontificia Universidad Cato´lica de Valparaı´so, Valparaı´so, Chile, 3 Departamento de Mejora Gene´tica Animal, INIA, Madrid, Spain, 4 Departamento de Produccio´n Animal, Facultad de Ciencias Agrono´micas, Universidad de Chile, Santiago, Chile Abstract Background: Naturally occurring coinfections of pathogens have been reported in salmonids, but their consequences on disease resistance are unclear. We hypothesized that 1) coinfection of Caligus rogercresseyi reduces the resistance of Atlantic salmon to Piscirickettsia salmonis; and 2) coinfection resistance is a heritable trait that does not correlate with resistance to a single infection. Methodology: In total, 1,634 pedigreed Atlantic salmon were exposed to a single infection (SI) of P. salmonis (primary pathogen) or coinfection with C. rogercresseyi (secondary pathogen). Low and high level of coinfection were evaluated (LC = 44 copepodites per fish; HC = 88 copepodites per fish). Survival and quantitative genetic analyses were performed to determine the resistance to the single infection and coinfections. Main Findings: C. rogercresseyi significantly increased the mortality in fish infected with P. salmonis (SI mortality = 251/545; LC mortality = 544/544 and HC mortality = 545/545). Heritability estimates for resistance to P. salmonis were similar and of 2 2 2 medium magnitude in all treatments (h SI = 0.2360.07; h LC = 0.1760.08; h HC = 0.2460.07). A large and significant genetic correlation with regard to resistance was observed between coinfection treatments (rg LC-HC = 0.9960.01) but not between the single and coinfection treatments (rg SI-LC = 20.1460.33; rg SI-HC = 0.3260.34). -
Ciguatera: Current Concepts
Ciguatera: Current concepts DAVID Z. LEVINE, DO Ciguatera poisoning develops unraveling the diagnosis may prove difficult. after ingestion of certain coral reef-asso Although the syndrome has been known for at ciated fish. With travel to and from the least hundreds of years, its mechanisms are tropics and importation of tropical food only beginning to be elucidated. Effective treat fish increasing, ciguatera has begun to ments have just begun to emerge. appear in temperate countries with more Ciguatera is a major public health prob frequency. The causative agents are cer lem in the tropics, with probably more than tain varieties of the protozoan dinofla 30,000 poisonings yearly in Puerto Rico and gellate Gambierdiscus toxicus, but bacte the US Virgin Islands alone. The endemic area ria associated with these protozoa may is bounded by latitudes 37° north and south. have a role in toxin elaboration. A specif Ciguatera in temperate countries is a concern ic "ciguatoxin" seems to cause the symptoms, because people returning from business trips, but toxicosis may also be a result of a fam vacations, or living in the tropics may have ily of toxins. Toxicosis develops from 10 been poisoned through food they had eaten. minutes to 30 hours after ingestion of poi The development of worldwide marketing of soned fish, and the syndrome can include fish from a variety of ecosystems creates a dan gastrointestinal and neurologic symptoms, ger of ciguatera intoxication in climates far as well as chills, sweating, pruritus, brady removed from sandy beaches and waving·palms. cardia, tachycardia, and long-lasting weak Outbreaks have been reported in Vermont, ness and fatigue. -
Host-Parasite Interaction of Atlantic Salmon (Salmo Salar) and the Ectoparasite Neoparamoeba Perurans in Amoebic Gill Disease
ORIGINAL RESEARCH published: 31 May 2021 doi: 10.3389/fimmu.2021.672700 Host-Parasite Interaction of Atlantic salmon (Salmo salar) and the Ectoparasite Neoparamoeba perurans in Amoebic Gill Disease † Natasha A. Botwright 1*, Amin R. Mohamed 1 , Joel Slinger 2, Paula C. Lima 1 and James W. Wynne 3 1 Livestock and Aquaculture, CSIRO Agriculture and Food, St Lucia, QLD, Australia, 2 Livestock and Aquaculture, CSIRO Agriculture and Food, Woorim, QLD, Australia, 3 Livestock and Aquaculture, CSIRO Agriculture and Food, Hobart, TAS, Australia Marine farmed Atlantic salmon (Salmo salar) are susceptible to recurrent amoebic gill disease Edited by: (AGD) caused by the ectoparasite Neoparamoeba perurans over the growout production Samuel A. M. Martin, University of Aberdeen, cycle. The parasite elicits a highly localized response within the gill epithelium resulting in United Kingdom multifocal mucoid patches at the site of parasite attachment. This host-parasite response Reviewed by: drives a complex immune reaction, which remains poorly understood. To generate a model Diego Robledo, for host-parasite interaction during pathogenesis of AGD in Atlantic salmon the local (gill) and University of Edinburgh, United Kingdom systemic transcriptomic response in the host, and the parasite during AGD pathogenesis was Maria K. Dahle, explored. A dual RNA-seq approach together with differential gene expression and system- Norwegian Veterinary Institute (NVI), Norway wide statistical analyses of gene and transcription factor networks was employed. A multi- *Correspondence: tissue transcriptomic data set was generated from the gill (including both lesioned and non- Natasha A. Botwright lesioned tissue), head kidney and spleen tissues naïve and AGD-affected Atlantic salmon [email protected] sourced from an in vivo AGD challenge trial. -
Assessing the Potential for Range Expansion of the Red Tide Algae Karenia Brevis
Nova Southeastern University NSUWorks All HCAS Student Capstones, Theses, and Dissertations HCAS Student Theses and Dissertations 8-7-2020 Assessing the Potential for Range Expansion of the Red Tide Algae Karenia brevis Edward W. Young Follow this and additional works at: https://nsuworks.nova.edu/hcas_etd_all Part of the Marine Biology Commons Share Feedback About This Item NSUWorks Citation Edward W. Young. 2020. Assessing the Potential for Range Expansion of the Red Tide Algae Karenia brevis. Capstone. Nova Southeastern University. Retrieved from NSUWorks, . (13) https://nsuworks.nova.edu/hcas_etd_all/13. This Capstone is brought to you by the HCAS Student Theses and Dissertations at NSUWorks. It has been accepted for inclusion in All HCAS Student Capstones, Theses, and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Capstone of Edward W. Young Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science Marine Science Nova Southeastern University Halmos College of Arts and Sciences August 2020 Approved: Capstone Committee Major Professor: D. Abigail Renegar, Ph.D. Committee Member: Robert Smith, Ph.D. This capstone is available at NSUWorks: https://nsuworks.nova.edu/hcas_etd_all/13 Nova Southeastern Univeristy Halmos College of Arts and Sciences Assessing the Potential for Range Expansion of the Red Tide Algae Karenia brevis By Edward William Young Submitted to the Faculty of Halmos College of Arts and Sciences in partial fulfillment of the requirements for the degree of Masters of Science with a specialty in: Marine Biology Nova Southeastern University September 8th, 2020 1 Table of Contents 1. -
Detection and Identification of Fish Pathogens: What Is the Future?
The Israeli Journal of Aquaculture – Bamidgeh 60(4), 2008, 213-229. 213 Detection and Identification of Fish Pathogens: What is the Future? A Review I. Frans1,2†, B. Lievens1,2*†, C. Heusdens1,2 and K.A. Willems1,2 1 Scientia Terrae Research Institute, B-2860 Sint-Katelijne-Waver, Belgium 2 Research Group Process Microbial Ecology and Management, Department Microbial and Molecular Systems, Katholieke Universiteit Leuven Association, De Nayer Campus, B-2860 Sint-Katelijne-Waver, Belgium, and Leuven Food Science and Nutrition Research Centre (LfoRCe), Katholieke Universiteit Leuven, B-3001 Heverlee-Leuven, Belgium (Received 1.8.08, Accepted 20.8.08) Key words: biosecurity, diagnosis, DNA array, multiplexing, real-time PCR Abstract Fish diseases pose a universal threat to the ornamental fish industry, aquaculture, and public health. They can be caused by many organisms, including bacteria, fungi, viruses, and protozoa. The lack of rapid, accurate, and reliable means of detecting and identifying fish pathogens is one of the main limitations in fish pathogen diagnosis and disease management and has triggered the search for alternative diagnostic techniques. In this regard, the advent of molecular biology, especially polymerase chain reaction (PCR), provides alternative means for detecting and iden- tifying fish pathogens. Many techniques have been developed, each requiring its own protocol, equipment, and expertise. A major challenge at the moment is the development of multiplex assays that allow accurate detection, identification, and quantification of multiple pathogens in a single assay, even if they belong to different superkingdoms. In this review, recent advances in molecular fish pathogen diagnosis are discussed with an emphasis on nucleic acid-based detec- tion and identification techniques.