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Molecular Phylogeny and Morphological
Zootaxa 3390: 1–18 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot GEOFFREY M. KAY & J. SCOTT KEOGH 1 Division of Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia 1 Corresponding author. E-mail: [email protected] Abstract Ctenotus is the largest and most diverse genus of skinks in Australia with at least 97 described species. We generated large mitochondrial and nuclear DNA data sets for 70 individuals representing all available species in the C. labillardieri species- group to produce the first comprehensive phylogeny for this clade. The widespread C. labillardieri was sampled extensively to provide the first detailed phylogeographic data set for a reptile in the southwestern Australian biodiversity hotspot. We supplemented our molecular data with a comprehensive morphological dataset for the entire group, and together these data are used to revise the group and describe a new species. The morphologically highly variable species C. labillardieri comprises seven well-supported genetic clades that each occupy distinct geographic regions. The phylogeographic patterns observed in this taxon are consistent with studies of frogs, plants and invertebrates, adding strength to emerging biogeographic hypotheses in this iconic region. The species C. catenifer, C. youngsoni, and C. gemmula are well supported, and despite limited sampling both C. catenifer and C. gemmula show substantial genetic structure. -
Gliding Dragons and Flying Squirrels: Diversifying Versus Stabilizing Selection on Morphology Following the Evolution of an Innovation
vol. 195, no. 2 the american naturalist february 2020 E-Article Gliding Dragons and Flying Squirrels: Diversifying versus Stabilizing Selection on Morphology following the Evolution of an Innovation Terry J. Ord,1,* Joan Garcia-Porta,1,† Marina Querejeta,2,‡ and David C. Collar3 1. Evolution and Ecology Research Centre and the School of Biological, Earth and Environmental Sciences, University of New South Wales, Kensington, New South Wales 2052, Australia; 2. Institute of Evolutionary Biology (CSIC–Universitat Pompeu Fabra), Passeig Marítim de la Barceloneta, 37–49, Barcelona 08003, Spain; 3. Department of Organismal and Environmental Biology, Christopher Newport University, Newport News, Virginia 23606 Submitted August 1, 2018; Accepted July 16, 2019; Electronically published December 17, 2019 Online enhancements: supplemental material. Dryad data: https://doi.org/10.5061/dryad.t7g227h. fi abstract: Evolutionary innovations and ecological competition are eral de nitions of what represents an innovation have been factors often cited as drivers of adaptive diversification. Yet many offered (reviewed by Rabosky 2017), this classical descrip- innovations result in stabilizing rather than diversifying selection on tion arguably remains the most useful (Galis 2001; Stroud morphology, and morphological disparity among coexisting species and Losos 2016; Rabosky 2017). Hypothesized innovations can reflect competitive exclusion (species sorting) rather than sympat- have drawn considerable attention among ecologists and ric adaptive divergence (character displacement). We studied the in- evolutionary biologists because they can expand the range novation of gliding in dragons (Agamidae) and squirrels (Sciuridae) of ecological niches occupied within communities. In do- and its effect on subsequent body size diversification. We found that gliding either had no impact (squirrels) or resulted in strong stabilizing ing so, innovations are thought to be important engines of selection on body size (dragons). -
Driving in Wa • a Guide to Rest Areas
DRIVING IN WA • A GUIDE TO REST AREAS Driving in Western Australia A guide to safe stopping places DRIVING IN WA • A GUIDE TO REST AREAS Contents Acknowledgement of Country 1 Securing your load 12 About Us 2 Give Animals a Brake 13 Travelling with pets? 13 Travel Map 2 Driving on remote and unsealed roads 14 Roadside Stopping Places 2 Unsealed Roads 14 Parking bays and rest areas 3 Litter 15 Sharing rest areas 4 Blackwater disposal 5 Useful contacts 16 Changing Places 5 Our Regions 17 Planning a Road Trip? 6 Perth Metropolitan Area 18 Basic road rules 6 Kimberley 20 Multi-lingual Signs 6 Safe overtaking 6 Pilbara 22 Oversize and Overmass Vehicles 7 Mid-West Gascoyne 24 Cyclones, fires and floods - know your risk 8 Wheatbelt 26 Fatigue 10 Goldfields Esperance 28 Manage Fatigue 10 Acknowledgement of Country The Government of Western Australia Rest Areas, Roadhouses and South West 30 Driver Reviver 11 acknowledges the traditional custodians throughout Western Australia Great Southern 32 What to do if you breakdown 11 and their continuing connection to the land, waters and community. Route Maps 34 Towing and securing your load 12 We pay our respects to all members of the Aboriginal communities and Planning to tow a caravan, camper trailer their cultures; and to Elders both past and present. or similar? 12 Disclaimer: The maps contained within this booklet provide approximate times and distances for journeys however, their accuracy cannot be guaranteed. Main Roads reserves the right to update this information at any time without notice. To the extent permitted by law, Main Roads, its employees, agents and contributors are not liable to any person or entity for any loss or damage arising from the use of this information, or in connection with, the accuracy, reliability, currency or completeness of this material. -
Figure 8. Location of Potential Nest Trees As Classified According to Hollow-Score
Bindoon Bypass Fauna Assessment Figure 8. Location of potential nest trees as classified according to hollow-score. See Appendix 11 for four finer scale maps. BAMFORD Consulting Ecologists | 41 Bindoon Bypass Fauna Assessment Figure 9. DBH profile of the potential black-cockatoo nesting trees surveyed. 4.3.1.1 Extrapolation of tree data The VSA areas presented in Table 7 were multiplied by the mean tree densities (Table 11) to estimate the total numbers of each (major) hollow-bearing tree species in the survey area. These values are presented in Table 13. Approximately 18 000 trees may support black-cockatoo nests within the entire survey area. Table 13. The estimated number of potential hollow-bearing trees (± SE) in the survey area. Note that not all VSAs were sampled. Vegetation and Substrate Jarrah Marri Wandoo Total Association > 500mm DBH > 500mm DBH >300mm DBH VSA 3. Marri-Jarrah woodland. 1664 ± 260 1366 ± 327 0 3030 ± 587 VSA 4. Marri-Jarrah woodland with little to no remnant 1702 ± 187 915 ± 46 0 2617 ± 233 understorey (e.g. grazed). VSA 5. Wandoo woodland (with 26 ± 26 1010 ± 616 2497 ± 700 3533 ± 1342 or without understorey). VSA 8. Paddocks with large 4535 ± 3354 3402 ± 1174 916 ± 916 8853 ± 5444 remnant trees. Overall 7927 ± 3827 6693 ± 2163 3413 ± 1616 18033 ± 7606 BAMFORD Consulting Ecologists | 42 Bindoon Bypass Fauna Assessment 4.3.2 Foraging The distribution of foraging habitat is mapped for Carnaby’s Black-Cockatoo and Forest Red-tailed Black-Cockatoo in Figure 10 and Figure 11 respectively (with finer scale maps presented in Appendix 12 and Appendix 13 respectively). -
Level 2 Fauna Survey MEELUP REGIONAL PARK
Level 2 Fauna Survey MEELUP REGIONAL PARK APRIL 2015 suite 1, 216 carp st (po box 470) bega nsw 2550 australia t (02) 6492 8333 www.nghenvironmental.com.au e [email protected] unit 18, level 3, 21 mary st suite 1, 39 fitzmaurice st (po box 5464) surry hills nsw 2010 australia wagga wagga nsw 2650 australia t (02) 8202 8333 t (02) 6971 9696 unit 17, 27 yallourn st (po box 62) room 15, 341 havannah st (po box 434) fyshwick act 2609 australia bathurst nsw 2795 australia t (02) 6280 5053 0488 820 748 Document Verification Project Title: MEELUP REGIONAL PARK Project Number: 5354 Project File Name: Meelup Regional Park Level 2 Fauna Survey v20150115 Revision Date Prepared by (name) Reviewed by (name) Approved by (name) DRAFT 27/03/15 Shane Priddle Nick Graham-Higgs Nick Graham-Higgs (SW Environmental) and Greg Harewood Final 17/04/15 Shane Priddle Shane Priddle Shane Priddle (SW Environmental) (SW Environmental) (SW Environmental) nghenvironmental prints all documents on environmentally sustainable paper including paper made from bagasse (a by- product of sugar production) or recycled paper. nghenvironmental is a registered trading name of NGH Environmental Pty Ltd; ACN: 124 444 622. ABN: 31 124 444 622 suite 1, 216 carp st (po box 470) bega nsw 2550 australia t (02) 6492 8333 www.nghenvironmental.com.au e [email protected] unit 18, level 3, 21 mary st suite 1, 39 fitzmaurice st (po box 5464) surry hills nsw 2010 australia wagga wagga nsw 2650 australia t (02) 8202 8333 t (02) 6971 9696 unit 17, 27 yallourn st (po box 62) room 15, 341 havannah st (po box 434) fyshwick act 2609 australia bathurst nsw 2795 australia t (02) 6280 5053 0488 820 748 Level 2 Fauna Survey MEELUP REGIONAL PARK CONTENTS LEVEL 2 FAUNA SURVEY ..................................................................................................................... -
Australia's National Programme of Action for the Protection of The
case study 21: the geographe bay region 2 Australia’s National Programme of Action for the Protection of the Marine Environment from Land-Based Activities case study 21: the geographe bay region executive summary The Geographe Bay region, like many other Western Australian coastal areas, is facing the stress of excess nutrient loading to the coastal waterways and the adjacent marine ecosystem. Also like several other regions, the symptoms of this are the highly damaging toxic algal blooms that occur frequently in the fresh and estuarine waters of the region, and the major impacts for agriculture, tourism, public health and biodiversity. These issues were first recognised in the Geographe Bay region in the 1990s, and a community-led process was initiated to develop and implement an integrated catchment management plan designed to reduce nutrient inputs and restore environmental values to their former levels. The catchment management plan is now implemented by Geographe Catchment Council (GeoCatch), a small community-based organisation established for this purpose. The catchment management plan is a voluntary instrument designed to re-orient rural and urban management practices towards more desirable objectives through education and awareness raising, through demonstrated examples of best practice, and through promotion of specific measures for adoption by local and state government agencies. A large number of important strategies have been developed and implemented, and new strategies are being developed. However, although the catchment management plan provides for monitoring and evaluation to be conducted, there appear to be very few examples that demonstrate the success of the plan in facilitating improved catchment health (such as by reducing nutrient loading to rivers or the bay). -
The Fauna of Boonanarring Nature Reserve
The Fauna of Boonanarring Nature Reserve. Tracey Moore, Tracy Sonneman, Alice Reaveley, Karen Bettink, Barbara Wilson. i Department of Parks and Wildlife Locked Bag 104, Bentley Delivery Centre, 6983 Western Australia Telephone: +61-8-9442 0300 Facsimile: +61-8-9386 6399 www.dpaw.wa.gov.au © Government of Western Australia, May 2015 This work is copyright. You may download, display, print and reproduce this material in unaltered form only (retaining this notice) for your personal, non-commercial use or use within your organisation. Apart from any use as permitted under the Copyright Act 1968, all other rights are reserved. Requests and inquiries concerning reproduction and rights should be addressed to the Department of Parks and Wildlife. Project team: Karen Bettink, Nicole Godfrey, Ben Kreplins, Tracey Moore, Craig Olejnik, Tracy Sonneman, Alice Reaveley, Barbara Wilson Acknowledgements: Astron Environmental Consulting Project contact: Tracey Moore; [email protected] i Table of Contents The fauna of Boonanarring Nature Reserve. ........................................ Error! Bookmark not defined. Introduction and Background ................................................................................................................. 1 Methods .................................................................................................................................................. 2 Location and vegetation ..................................................................................................................... -
Scientific Name Common Name Victorian A
Table 1: Species present in a 2km radius of Crib Point (VBA database search 13 Aug 2020) Scientific Name Common Name Victorian Advisory List Austrolestes analis Slender Ringtail Microcarbo melanoleucos Little Pied Cormorant Calamanthus fuliginosus Striated Fieldwren Acacia verticillata Prickly Moses Poa labillardierei Common Tussock-grass Selliera radicans Shiny Swamp-mat Phyllostachys spp. Bamboo Eudyptula minor Little Penguin Turnix varius Painted Button-quail Phaps chalcoptera Common Bronzewing Phaps elegans Brush Bronzewing Ocyphaps lophotes Crested Pigeon Lewinia pectoralis Lewin's Rail Vulnerable Hypotaenidia philippensis Buff-banded Rail Poliocephalus poliocephalus Hoary-headed Grebe Ardenna tenuirostris Short-tailed Shearwater Thalassarche melanophris Black-browed Albatross Vulnerable Thalassarche cauta Shy Albatross Vulnerable Phalacrocorax carbo Great Cormorant Phalacrocorax sulcirostris Little Black Cormorant Phalacrocorax fuscescens Black-faced Cormorant Near threatened Phalacrocorax varius Pied Cormorant Near threatened Morus serrator Australasian Gannet Pelecanus conspicillatus Australian Pelican Hydroprogne caspia Caspian Tern Near threatened Thalasseus bergii Crested Tern Sternula nereis Fairy Tern Endangered Chroicocephalus novaehollandiae Silver Gull Haematopus longirostris Pied Oystercatcher Vanellus miles Masked Lapwing Pluvialis fulva Pacific Golden Plover Vulnerable Charadrius bicinctus Double-banded Plover Charadrius ruficapillus Red-capped Plover Numenius madagascariensis Eastern Curlew Vulnerable Limosa lapponica -
2020 KALAMUNDA LOCAL BIODIVERSITY STRATEGY Technical Report October 2020
Public Agenda Briefing Forum 8 December 2020 Attachments Attachment 10.2.1.2 City of Kalamunda Biodiversity Conservation Action Plan 2020 – 2030 2020 KALAMUNDA LOCAL BIODIVERSITY STRATEGY Technical Report October 2020 Prepared by Nam Natura Consulting 0 City of Kalamunda 852 Public Agenda Briefing Forum 8 December 2020 Attachments Attachment 10.2.1.2 Document Tracking Item Detail Project Name Review and update of the City of Kalamunda Local Biodiversity Strategy Client City of Kalamunda Prepared by Renata Zelinova Status Draft Technical Report Version 4 Number Last saved on Disclaimer This document may only be used for the purpose for which it was commissioned and in accordance with the contract between the City of Kalamunda and Nam Natura Consulting. The scope of services was defined in consultation with the client, by time and budgetary constraints imposed by the client, and the availability of reports and other data on the subject area. Changes to available information, legislation and schedules are made on an ongoing basis and readers should obtain up to date information. Nam Natura Consulting accepts no liability or responsibility whatsoever for or in respect of any use of or reliance upon this report and its supporting material by any third party. Information provided is not intended to be a substitute for site specific assessment or legal advice in relation to any matter. Unauthorised use of this report in any form is prohibited. 1 City of Kalamunda 853 Public Agenda Briefing Forum 8 December 2020 Attachments Attachment 10.2.1.2 PURPOSE .................................................................................................................... 4 1 INTRODUCTION – WHY HAVE A LOCAL BIODIVERSITY STRATEGY? .............. -
Reptiles in and Around the House Identification and Distribution Reptiles Inhabit Every Environment in Australia
Reptiles in and around the house Identification and Distribution Reptiles inhabit every environment in Australia. Common reptiles found in Western Australian backyards include: Tiger snakes Notechis scutatus occur in southwest WA, and are often seen near water, including rivers, dams, drains and wetlands. Unlike most other Australian elapids, tiger snakes climb well. They can range from grey, olive, brown to black in colour and often have yellow and black cross-bands, but not all have this pattern. Venomous Dugite. Photo: R. Lloyd/Fauna Track Dugites Pseudonaja affinis occur in southwest WA and Gwarda Pseudonaja nuchalis occur from Perth northwards. They live in a wide variety of habitats including coastal dunes, heathlands, shrublands, woodlands and forests. They are long and slender, with relatively large scales that have a semi-glossy appearance. They can range from brown, olive to grey in colour, and can have irregular black/dark grey spotting, but patterning varies. Venomous Mulga snakes Pseudechis australis occur in a wide variety of habitats, northwards from Perth and Narrogin. They are quite robust, with a broad, deep head and bulbous cheeks. They can range from pale brown, dark olive to reddish-brown in colour, and darker snakes often have two-toned scales with a lighter colour that contrasts with the darker colour to produce a reticulated effect. The belly is cream to salmon-coloured. Venomous There are two subspecies of carpet pythons found in a large variety of habitats in WA: Morelia spilota imbricata occurs in the southwest and Morelia spilota variegata occurs in the Kimberley. They are 1-4m in length, tend to be pale to dark brown with black blotches that sometimes have a Carpet python. -
Venemous Snakes
WASAH WESTERN AUSTRALIAN SOCIETY of AMATEUR HERPETOLOGISTS (Inc) K E E P I N G A D V I C E S H E E T Venomous Snakes Southern Death Adder (Acanthophis Southern Death antarcticus) – Maximum length 100 cm. Adder Category 5. Desert Death Adder (Acanthophis pyrrhus) – Acanthophis antarcticus Maximum length 75 cm. Category 5. Pilbara Death Adder (Acanthophis wellsi) – Maximum length 70 cm. Category 5. Western Tiger Snake (Notechis scutatus) - Maximum length 160 cm. Category 5. Mulga Snake (Pseudechis australis) – Maximum length 300 cm. Category 5. Spotted Mulga Snake (Pseudechis butleri) – Maximum length 180 cm. Category 5. Dugite (Pseudonaja affinis affinis) – Maximum Desert Death Adder length 180 cm. Category 5. Acanthophis pyrrhus Gwardar (Pseudonaja nuchalis) – Maximum length 100 cm. Category 5. NOTE: All species listed here are dangerously venomous and are listed as Category 5. Only the experienced herpetoculturalist should consider keeping any of them. One must be over 18 years of age to hold a category 5 license. Maintaining a large elapid carries with 1 it a considerable responsibility. Unless you are Pilbara Death Adder confident that you can comply with all your obligations and licence requirements when Acanthophis wellsi keeping dangerous animals, then look to obtaining a non-venomous species instead. NATURAL HABITS: Venomous snakes occur in a wide variety of habitats and, apart from death adders, are highly mobile. All species are active day and night. HOUSING: In all species listed except death adders, one adult (to 150 cm total length) can be kept indoors in a lockable, top-ventilated, all glass or glass-fronted wooden vivarium of Western Tiger Snake at least 90 x 45 cm floor area. -
Special Issue3.7 MB
Volume Eleven Conservation Science 2016 Western Australia Review and synthesis of knowledge of insular ecology, with emphasis on the islands of Western Australia IAN ABBOTT and ALLAN WILLS i TABLE OF CONTENTS Page ABSTRACT 1 INTRODUCTION 2 METHODS 17 Data sources 17 Personal knowledge 17 Assumptions 17 Nomenclatural conventions 17 PRELIMINARY 18 Concepts and definitions 18 Island nomenclature 18 Scope 20 INSULAR FEATURES AND THE ISLAND SYNDROME 20 Physical description 20 Biological description 23 Reduced species richness 23 Occurrence of endemic species or subspecies 23 Occurrence of unique ecosystems 27 Species characteristic of WA islands 27 Hyperabundance 30 Habitat changes 31 Behavioural changes 32 Morphological changes 33 Changes in niches 35 Genetic changes 35 CONCEPTUAL FRAMEWORK 36 Degree of exposure to wave action and salt spray 36 Normal exposure 36 Extreme exposure and tidal surge 40 Substrate 41 Topographic variation 42 Maximum elevation 43 Climate 44 Number and extent of vegetation and other types of habitat present 45 Degree of isolation from the nearest source area 49 History: Time since separation (or formation) 52 Planar area 54 Presence of breeding seals, seabirds, and turtles 59 Presence of Indigenous people 60 Activities of Europeans 63 Sampling completeness and comparability 81 Ecological interactions 83 Coups de foudres 94 LINKAGES BETWEEN THE 15 FACTORS 94 ii THE TRANSITION FROM MAINLAND TO ISLAND: KNOWNS; KNOWN UNKNOWNS; AND UNKNOWN UNKNOWNS 96 SPECIES TURNOVER 99 Landbird species 100 Seabird species 108 Waterbird