Physiological Responses of the Abalone Haliotis Discus
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Geoducks—A Compendium
34, NUMBER 1 VOLUME JOURNAL OF SHELLFISH RESEARCH APRIL 2015 JOURNAL OF SHELLFISH RESEARCH Vol. 34, No. 1 APRIL 2015 JOURNAL OF SHELLFISH RESEARCH CONTENTS VOLUME 34, NUMBER 1 APRIL 2015 Geoducks — A compendium ...................................................................... 1 Brent Vadopalas and Jonathan P. Davis .......................................................................................... 3 Paul E. Gribben and Kevin G. Heasman Developing fisheries and aquaculture industries for Panopea zelandica in New Zealand ............................... 5 Ignacio Leyva-Valencia, Pedro Cruz-Hernandez, Sergio T. Alvarez-Castaneda,~ Delia I. Rojas-Posadas, Miguel M. Correa-Ramırez, Brent Vadopalas and Daniel B. Lluch-Cota Phylogeny and phylogeography of the geoduck Panopea (Bivalvia: Hiatellidae) ..................................... 11 J. Jesus Bautista-Romero, Sergio Scarry Gonzalez-Pel aez, Enrique Morales-Bojorquez, Jose Angel Hidalgo-de-la-Toba and Daniel Bernardo Lluch-Cota Sinusoidal function modeling applied to age validation of geoducks Panopea generosa and Panopea globosa ................. 21 Brent Vadopalas, Jonathan P. Davis and Carolyn S. Friedman Maturation, spawning, and fecundity of the farmed Pacific geoduck Panopea generosa in Puget Sound, Washington ............ 31 Bianca Arney, Wenshan Liu, Ian Forster, R. Scott McKinley and Christopher M. Pearce Temperature and food-ration optimization in the hatchery culture of juveniles of the Pacific geoduck Panopea generosa ......... 39 Alejandra Ferreira-Arrieta, Zaul Garcıa-Esquivel, Marco A. Gonzalez-G omez and Enrique Valenzuela-Espinoza Growth, survival, and feeding rates for the geoduck Panopea globosa during larval development ......................... 55 Sandra Tapia-Morales, Zaul Garcıa-Esquivel, Brent Vadopalas and Jonathan Davis Growth and burrowing rates of juvenile geoducks Panopea generosa and Panopea globosa under laboratory conditions .......... 63 Fabiola G. Arcos-Ortega, Santiago J. Sanchez Leon–Hing, Carmen Rodriguez-Jaramillo, Mario A. -
Shellfish Allergy - an Asia-Pacific Perspective
Review article Shellfish allergy - an Asia-Pacific perspective 1 1 1 2 Alison Joanne Lee, Irvin Gerez, Lynette Pei-Chi Shek and Bee Wah Lee Summary Conclusion: Shellfish allergy is common in the Background and Objective: Shellfish forms a Asia Pacific. More research including food common food source in the Asia-Pacific and is challenge-proven subjects are required to also growing in the West. This review aims to establish the true prevalence, as well as to summarize the current literature on the understand clinical cross reactivity and epidemiology and research on shellfish allergy variations in clinical features. (Asian Pac J Allergy with particular focus on studies emerging from Immunol 2012;30:3-10) the Asia-Pacific region. Key words: Shellfish allergy, Prawn allergy, Shrimp Data Sources: A PubMed search using search allergy, Food allergy, Anaphylaxis, Tropomyosin, strategies “Shellfish AND Allergy”, “Shellfish Allergy Asia”, and “Shellfish AND anaphylaxis” Allergens, Asia was made. In all, 244 articles written in English were reviewed. Introduction Shellfish, which include crustaceans and Results: Shellfish allergy in the Asia-Pacific molluscs, is one of the most common causes of food ranks among the highest in the world and is the allergy in the world in both adults and children, and most common cause of food-induced anaphylaxis. it has been demonstrated to be one of the top Shellfish are classified into molluscs and ranking causes of food allergy in children in the arthropods. Of the arthropods, the crustaceans Asia-Pacific.1-3 In addition, shellfish allergy usually in particular Penaeid prawns are the most persists, is one of the leading causes of food-induced common cause of allergy and are therefore most anaphylaxis, and has been implicated as the most extensively studied. -
Phylogeography of Geoduck Clams Panopea Generosa in Southeastern Alaska
FINAL REPORT Phylogeography of Geoduck Clams Panopea generosa in Southeastern Alaska W. Stewart Grant and William D. Templin Division of Commercial Fisheries, Alaska Department of Fish & Game, 333 Raspberry Road, Anchorage, AK 99518, USA Grant et al.: Genetics of geoduck clams 2 Abstract: Geoduck clams Panopea generosa have supported commercial fisheries in Alaska for over two decades and subsistence harvests for much longer. Increasing demands for these clams have stimulated interest in enhancing production through hatchery rearing of larvae and out- planting of juveniles. Key components to stock management and supplementation are an understanding of genetic stock structure and the development of genetic guidelines for hatchery culture and out-planting. In this study, we examined genetic variability among geoduck clams from 16 localities in southeastern Alaska and in three samples of hatchery-reared juveniles. A 684 base-pair segment of the mitochondrial (mt) DNA cytochrome oxidase 1 gene produced 168 haplotypes in 1362 clams and showed a significant excess of low-frequency haplotypes overall (Tajima’s DT = -2.63; Fu’s FS = -29.01). Haplotype diversity (h = 0.708) and nucleotide diversity (θπ = 0.0018) were moderate compared to other marine invertebrates. The analysis of molecular variance did not detect heterogeneity among samples (FST = 0.0008, P = 0.623, mean sample size N = 71.7 clams). Microsatellites showed low-frequency null alleles that produced pervasive departures from Hardy-Weinberg genotypic proportions and that distort estimates of genetic diversity. However, estimates of divergence between populations are relatively un affected because the null alleles were more or less evenly distributed among samples. -
Growth-Related Gene Expression in Haliotis Midae
GROWTH‐RELATED GENE EXPRESSION IN HALIOTIS MIDAE Mathilde van der Merwe Dissertation presented for the degree of Doctor of Philosophy (Genetics) at Stellenbosch University Promoter: Dr Rouvay Roodt‐Wilding Co‐promoters: Dr Stéphanie Auzoux‐Bordenave and Dr Carola Niesler December 2010 Declaration By submitting this dissertation, I declare that the entirety of the work contained therein is my own, original work, that I am the authorship owner thereof (unless to the extent explicitly otherwise stated) and that I have not previously in its entirety or in part submitted it for obtaining any qualification. Date: 09/11/2010 Copyright © 2010 Stellenbosch University All rights reserved I Acknowledgements I would like to express my sincere gratitude and appreciation to the following persons for their contribution towards the successful completion of this study: Dr Rouvay Roodt‐Wilding for her continued encouragement, careful attention to detail and excellent facilitation throughout the past years; Dr Stéphanie Auzoux‐Bordenave for valuable lessons in abalone cell culture and suggestions during completion of the manuscript; Dr Carola Niesler for setting an example and providing guidance that already started preparing me for a PhD several years ago; Dr Paolo Franchini for his patience and greatly valued assistance with bioinformatics; Dr Aletta van der Merwe and my fellow lab‐colleagues for their technical and moral support; My dear husband Willem for his love, support and enthusiasm, for sitting with me during late nights in the lab and for making me hundreds of cups of tea; My parents for their love and encouragement and for instilling the determination in me to complete my studies; All my family and friends for their sincere interest. -
Genomic Solutions for Shellfish Selective Breeding
GENOMIC SOLUTIONS FOR SHELLFISH SELECTIVE BREEDING Workshop Vivaldi Lucie Genestout & Romain Morvezen AQUA 2018 Montpellier – 29/08/2018 Overview • 300 000 analyzes / year • 40 000 for aquaculture • 1 200 m2 of facilities • 20 km from Paris • Since 1956 • 2 million samples in stock • Subsidiary of the cooperative Lucie GENESTOUT - LABOGENA - AQUA 2018 - VIVALDI An industrial genotyping platform • High throughput genotyping on DNA chips • 8 liquid handling robots (Tecan) • 5 extraction robots Qiasymphony (Qiagen) • Infinium XT chemistry (Illumina): 96 samples HD Chips • Management system LIMS • Barcode traceability from the sampling to the result • Standards • ISO17025 • ISAG interlaboratory tests rank 1 Lucie GENESTOUT - LABOGENA - AQUA 2018 - VIVALDI An efficient SNP panel for Pacific Oyster • 384 markers on new high throughput Illumina XT chemistry • Including OsHV-1 resistance markers • Assignments made with AccurAssign Labogena software • Taking into account mating plans • Using both likelihood and exclusion • Ranking of parents 96samples DNA chip Illumina Lucie GENESTOUT - LABOGENA - AQUA 2018 - VIVALDI project An efficient SNP panel for Pacific Oyster Assigned to 1 couple 466 514 577 408 Assigned to many couples 12 0 0 0 Not assigned 12 47 23 6 Inexploitable 31 35 12 152 Useful assignment rate 89% 86% 94% 72% Results from GenOyster Project, obtained with GigADN Project markers Lucie GENESTOUT - LABOGENA - AQUA 2018 - VIVALDI project An efficient SNP panel for Pacific Oyster Assigned to 1 couple 522 1098 Assigned to many couples 2 -
Shelled Molluscs
Encyclopedia of Life Support Systems (EOLSS) Archimer http://www.ifremer.fr/docelec/ ©UNESCO-EOLSS Archive Institutionnelle de l’Ifremer Shelled Molluscs Berthou P.1, Poutiers J.M.2, Goulletquer P.1, Dao J.C.1 1 : Institut Français de Recherche pour l'Exploitation de la Mer, Plouzané, France 2 : Muséum National d’Histoire Naturelle, Paris, France Abstract: Shelled molluscs are comprised of bivalves and gastropods. They are settled mainly on the continental shelf as benthic and sedentary animals due to their heavy protective shell. They can stand a wide range of environmental conditions. They are found in the whole trophic chain and are particle feeders, herbivorous, carnivorous, and predators. Exploited mollusc species are numerous. The main groups of gastropods are the whelks, conchs, abalones, tops, and turbans; and those of bivalve species are oysters, mussels, scallops, and clams. They are mainly used for food, but also for ornamental purposes, in shellcraft industries and jewelery. Consumed species are produced by fisheries and aquaculture, the latter representing 75% of the total 11.4 millions metric tons landed worldwide in 1996. Aquaculture, which mainly concerns bivalves (oysters, scallops, and mussels) relies on the simple techniques of producing juveniles, natural spat collection, and hatchery, and the fact that many species are planktivores. Keywords: bivalves, gastropods, fisheries, aquaculture, biology, fishing gears, management To cite this chapter Berthou P., Poutiers J.M., Goulletquer P., Dao J.C., SHELLED MOLLUSCS, in FISHERIES AND AQUACULTURE, from Encyclopedia of Life Support Systems (EOLSS), Developed under the Auspices of the UNESCO, Eolss Publishers, Oxford ,UK, [http://www.eolss.net] 1 1. -
Os Nomes Galegos Dos Moluscos 2020 2ª Ed
Os nomes galegos dos moluscos 2020 2ª ed. Citación recomendada / Recommended citation: A Chave (20202): Os nomes galegos dos moluscos. Xinzo de Limia (Ourense): A Chave. https://www.achave.ga /wp!content/up oads/achave_osnomesga egosdos"mo uscos"2020.pd# Fotografía: caramuxos riscados (Phorcus lineatus ). Autor: David Vilasís. $sta o%ra est& su'eita a unha licenza Creative Commons de uso a%erto( con reco)ecemento da autor*a e sen o%ra derivada nin usos comerciais. +esumo da licenza: https://creativecommons.org/ icences/%,!nc-nd/-.0/deed.g . Licenza comp eta: https://creativecommons.org/ icences/%,!nc-nd/-.0/ ega code. anguages. 1 Notas introdutorias O que cont!n este documento Neste recurso léxico fornécense denominacións para as especies de moluscos galegos (e) ou europeos, e tamén para algunhas das especies exóticas máis coñecidas (xeralmente no ámbito divulgativo, por causa do seu interese científico ou económico, ou por seren moi comúns noutras áreas xeográficas) ! primeira edición d" Os nomes galegos dos moluscos é do ano #$%& Na segunda edición (2$#$), adicionáronse algunhas especies, asignáronse con maior precisión algunhas das denominacións vernáculas galegas, corrixiuse algunha gralla, rema'uetouse o documento e incorporouse o logo da (have. )n total, achéganse nomes galegos para *$+ especies de moluscos A estrutura )n primeiro lugar preséntase unha clasificación taxonómica 'ue considera as clases, ordes, superfamilias e familias de moluscos !'uí apúntanse, de maneira xeral, os nomes dos moluscos 'ue hai en cada familia ! seguir -
Population Genetic Structure of the Perlemoen Haliotis Midae in South Africa: Evidence of Range Expansion and Founder Events
MARINE ECOLOGY PROGRESS SERIES Vol. 270: 163–172, 2004 Published April 14 Mar Ecol Prog Ser Population genetic structure of the perlemoen Haliotis midae in South Africa: evidence of range expansion and founder events B. S. Evans1, 2, 4,*, N. A. Sweijd3, R. C. K. Bowie3, 5, P. A. Cook3, N. G. Elliott2 1School of Zoology, University of Tasmania, GPO Box 252-05, Hobart, Tasmania 7001, Australia 2CSIRO Marine Research, GPO Box 1538, Hobart, Tasmania 7001, Australia 3Department of Zoology, University of Cape Town, Private Bag, Rondebosch 7701, Cape Town, South Africa 4Present address: School of Marine Biology and Aquaculture, James Cook University, Townsville, Queensland 4811, Australia 5Present address: Department of Zoology, University of Stellenbosch, Private Bag XI, Matieland 7602, South Africa ABSTRACT: Genetic diversity in Haliotis midae, a highly valued and heavily exploited marine gastropod, was assessed using 3 marker types across samples from the species’ range in South Africa. Variation was compared at 7 allozyme loci, 2 regions of mitochondrial DNA and 3 microsatellite loci. We conclude that populations of H. midae on either side of Cape Agulhas represent 2 independent reproductive stocks. The area of transition between the stocks coincides with oceanographic features of the region. Evidence from all 3 types of genetic marker indicates an isolated introduction event to the east of Cape Agulhas, and subsequent range expansion in an easterly direction. The disparity between allozyme data and the other 2 forms is seen as further evidence for the presence of balanc- ing selection at allozyme loci. KEY WORDS: Allozymes · Mitochondrial DNA · Microsatellites · Abalone Resale or republication not permitted without written consent of the publisher INTRODUCTION tions restricted to the eastern Cape coastline. -
Sipunculus Nudus): an LC–MS-Based Metabolomics Study
fmars-08-702101 July 26, 2021 Time: 16:57 # 1 ORIGINAL RESEARCH published: 26 July 2021 doi: 10.3389/fmars.2021.702101 Dietary Carbohydrate and Protein Levels Affect the Growth Performance of Juvenile Peanut Worm (Sipunculus nudus): An LC–MS-Based Metabolomics Study Jianqiang Huang1, Ruzhuo Zhong1, Chuangye Yang1,2,3*, Qingheng Wang1,2,3, Yongshan Liao1 and Yuewen Deng1,2,3 1 Fisheries College, Guangdong Ocean University, Zhanjiang, China, 2 Guangdong Provincial Engineering Laboratory for Mariculture Organism Breeding, Zhanjiang, China, 3 Guangdong Provincial Key Laboratory of Pathogenic Biology and Epidemiology for Aquatic Economic Animals, Zhanjiang, China The peanut worm (Sipunculus nudus) is an economically important fishery resource in China. To determine how dietary carbohydrate and protein levels affect the growth performance of juvenile S. nudus and identify the mechanisms underlying observed Edited by: patterns, five isoenergetic and isolipidic diets with different levels of carbohydrate and Xiaotong Wang, protein were formulated and fed to juvenile S. nudus; the experimental groups were Ludong University, China referred to as EG1, EG2, EG3, EG4, and EG5, respectively. After 90 days of feeding, Reviewed by: S. nudus had significantly lower survival rates when fed D5 compared with other Chenglong Ji, Yantai Institute of Coastal Zone diets (P < 0.05), and the highest survival rate was observed in EG2 individuals. The Research, Chinese Academy weight gain rate and specific growth rate were significantly higher in EG2 compared of Sciences (CAS), China Ming Li, with the other groups (P < 0.05). Metabolomic profiling using liquid chromatography– Ningbo University, China mass spectrometry revealed 83 significantly differential metabolites (POS: 59; NEG: *Correspondence: 24), which were identified via an in-house MS2 database. -
Octopus As Predators of Haliotis Laevigata on an Abalone Sea Ranch of South-Western Australia
Octopus as predators of Haliotis laevigata on an abalone sea ranch of south-western Australia Submitted by Claire Greenwell This Thesis is presented for the degree of Bachelor of Science Honours School of Veterinary and Life Sciences, Murdoch University, 2017 Declaration I declare that this Thesis is my own account of my research and contains as its main content work, which has not previously been submitted for a degree at any tertiary education institution. Claire Nicole Greenwell ii Acknowledgements Firstly I would like to thank Brad Adams, and the team at Ocean Grown Abalone. Without your generous support this project would not have been possible. I consider myself privileged to have had the opportunity to undertake this research in such a unique ecosystem. To Mark Wall, thank you for all your efforts, from collecting octopus samples, the explanation of processes, and taking us out diving. Your enthusiasm, hard work, and positive attitude is inspiring. Thanks also to Steve Chase and the dive team for your efforts and making us feel welcome on the ranch. I wish you all the best for the future and look forward to watching the operation grow. To my supervisors, Neil Loneragan, James Tweedley, and Ryan Admiraal thank you for your friendship, support and encouragement. I have much admiration and respect for you all. Ryan, thank you for your perseverance and help in tackling the data analysis. Despite some pretty nightmarish coding, you have a way of making stats fun. I am extremely grateful for your help. James, thank you for answering my countless questions, and for the many hints and insights along the way. -
A STUDY of the REPRODUCTIVE BIOLOGY of the RED ABALONE, Hal/OTIS RUFESCENSSWAINSON, NEAR MENDOCINO, CALIFORNIA 1
80 REPRINT FROM Calif. Fis" and Came, 63(2) : 80-94. 1977. A STUDY OF THE REPRODUCTIVE BIOLOGY OF THE RED ABALONE, HAl/OTIS RUFESCENSSWAINSON, NEAR MENDOCINO, CALIFORNIA 1 ALBERT E. GIORGI 2 Humboldt State University Arcata, California 95521 JOHN D. DEMARTINI Department of Biology Humboldt State University Arcata, California 95521 The reproductive cycles of two subtidal populations of the red abalone, Hil/iolis rulescens, were studied at Point Cabrillo Lighthouse Station and Van Damme State Park near Mendocino, California. From June 1972, through March 1974, gametogene sis was monitored histologically. Both populations spawned during spring and early summer. Not all members of either population spawned during a season. Fecundity was estaimated for females ranging in shell lengths 134.00 to 198.5 mm (5.3 to 7.8 inches). The lowest and highest estimates were 619,000 and 12,575,000 ripe oocytes per ovary. The minimum size at sexual maturity was investigated. The smallest male was 84.5 mm (3.3 inches) and the smallest female was 39.5 mm (1.6 inches). Females matured at a smaller size than males. A possible mode of gamete resorption was noted. INTRODUCTION The purpose of our study was to determine minimum size at sexual maturity, to measure fecundity, and to monitor histologically the reproductive cycle of two populations of the red abalone, Haliotis rufescens Swainson, for 2 years near Mendocino, California. Early investigators believed that the red abalone spawned during late winter and early spring (Heath 1925, Bonnot 1930, and Croker 1931). Boolootian, Farmanfarmaian and Giese (1962) used a gonad index to detect spawning in a red abalone population at Pacific Grove, California. -
Haliotis Midae
A PROTEOMIC INVESTIGATION OF THE HEAT STRESS RESPONSE OF THE SOUTH AFRICAN ABALONE HALIOTIS MIDAE By Bridget Calder Thesis Presented for the Degree of DOCTOR OF PHILOSOPHY in the Department of Molecular and Cell Biology, Faculty of Science University of Cape Town, South Africa. July 2014 Supervised by Prof. V. Coyne and Dr. S. Rafudeen Declaration I know the meaning of plagiarism and declare that all of the work in this thesis, save for that which is properly acknowledged, is my own. Signed: B. Calder __________________ Acknowledgements I would like to acknowledge the support and assistance offered to me by my supervisor, Professor Vernon. E. Coyne, and co-supervisor Dr Suhail Rafudeen during my time at the University of Cape Town. The marine biotechnology laboratory has been a source of constant comfort and much needed advice during my time in the molecular and cell biology department. Thank you also to the department as a whole for providing me with so much stimulating tea-time conversation and helpful guidance. I would also like to thank Dr Zac McDonald for his assitance with mass spectrometry in the molecular and cell biology department, without which this work would not have been possible. Then, I would like to thank my friends and loved ones who have been so patient with me while I completed this work. This would not have been possible without a loving and understanding support structure. I would also like to formally acknowledge the financial assistance offered to me by the postrgraduate funding office at the University of Cape Town, and the National Research foundation for providing bursaries during my postgraduate studies.