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Chemical Elements in Ascomycetes and Basidiomycetes
Chemical elements in Ascomycetes and Basidiomycetes The reference mushrooms as instruments for investigating bioindication and biodiversity Roberto Cenci, Luigi Cocchi, Orlando Petrini, Fabrizio Sena, Carmine Siniscalco, Luciano Vescovi Editors: R. M. Cenci and F. Sena EUR 24415 EN 2011 1 The mission of the JRC-IES is to provide scientific-technical support to the European Union’s policies for the protection and sustainable development of the European and global environment. European Commission Joint Research Centre Institute for Environment and Sustainability Via E.Fermi, 2749 I-21027 Ispra (VA) Italy Legal Notice Neither the European Commission nor any person acting on behalf of the Commission is responsible for the use which might be made of this publication. Europe Direct is a service to help you find answers to your questions about the European Union Freephone number (*): 00 800 6 7 8 9 10 11 (*) Certain mobile telephone operators do not allow access to 00 800 numbers or these calls may be billed. A great deal of additional information on the European Union is available on the Internet. It can be accessed through the Europa server http://europa.eu/ JRC Catalogue number: LB-NA-24415-EN-C Editors: R. M. Cenci and F. Sena JRC65050 EUR 24415 EN ISBN 978-92-79-20395-4 ISSN 1018-5593 doi:10.2788/22228 Luxembourg: Publications Office of the European Union Translation: Dr. Luca Umidi © European Union, 2011 Reproduction is authorised provided the source is acknowledged Printed in Italy 2 Attached to this document is a CD containing: • A PDF copy of this document • Information regarding the soil and mushroom sampling site locations • Analytical data (ca, 300,000) on total samples of soils and mushrooms analysed (ca, 10,000) • The descriptive statistics for all genera and species analysed • Maps showing the distribution of concentrations of inorganic elements in mushrooms • Maps showing the distribution of concentrations of inorganic elements in soils 3 Contact information: Address: Roberto M. -
Chemical Elements in Ascomycetes and Basidiomycetes
Chemical elements in Ascomycetes and Basidiomycetes The reference mushrooms as instruments for investigating bioindication and biodiversity Roberto Cenci, Luigi Cocchi, Orlando Petrini, Fabrizio Sena, Carmine Siniscalco, Luciano Vescovi Editors: R. M. Cenci and F. Sena EUR 24415 EN 2011 1 The mission of the JRC-IES is to provide scientific-technical support to the European Union’s policies for the protection and sustainable development of the European and global environment. European Commission Joint Research Centre Institute for Environment and Sustainability Via E.Fermi, 2749 I-21027 Ispra (VA) Italy Legal Notice Neither the European Commission nor any person acting on behalf of the Commission is responsible for the use which might be made of this publication. Europe Direct is a service to help you find answers to your questions about the European Union Freephone number (*): 00 800 6 7 8 9 10 11 (*) Certain mobile telephone operators do not allow access to 00 800 numbers or these calls may be billed. A great deal of additional information on the European Union is available on the Internet. It can be accessed through the Europa server http://europa.eu/ JRC Catalogue number: LB-NA-24415-EN-C Editors: R. M. Cenci and F. Sena JRC65050 EUR 24415 EN ISBN 978-92-79-20395-4 ISSN 1018-5593 doi:10.2788/22228 Luxembourg: Publications Office of the European Union Translation: Dr. Luca Umidi © European Union, 2011 Reproduction is authorised provided the source is acknowledged Printed in Italy 2 Attached to this document is a CD containing: • A PDF copy of this document • Information regarding the soil and mushroom sampling site locations • Analytical data (ca, 300,000) on total samples of soils and mushrooms analysed (ca, 10,000) • The descriptive statistics for all genera and species analysed • Maps showing the distribution of concentrations of inorganic elements in mushrooms • Maps showing the distribution of concentrations of inorganic elements in soils 3 Contact information: Address: Roberto M. -
A Survey of Ballistosporic Phylloplane Yeasts in Baton Rouge, Louisiana
Louisiana State University LSU Digital Commons LSU Master's Theses Graduate School 2012 A survey of ballistosporic phylloplane yeasts in Baton Rouge, Louisiana Sebastian Albu Louisiana State University and Agricultural and Mechanical College, [email protected] Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_theses Part of the Plant Sciences Commons Recommended Citation Albu, Sebastian, "A survey of ballistosporic phylloplane yeasts in Baton Rouge, Louisiana" (2012). LSU Master's Theses. 3017. https://digitalcommons.lsu.edu/gradschool_theses/3017 This Thesis is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Master's Theses by an authorized graduate school editor of LSU Digital Commons. For more information, please contact [email protected]. A SURVEY OF BALLISTOSPORIC PHYLLOPLANE YEASTS IN BATON ROUGE, LOUISIANA A Thesis Submitted to the Graduate Faculty of the Louisiana Sate University and Agricultural and Mechanical College in partial fulfillment of the requirements for the degree of Master of Science in The Department of Plant Pathology by Sebastian Albu B.A., University of Pittsburgh, 2001 B.S., Metropolitan University of Denver, 2005 December 2012 Acknowledgments It would not have been possible to write this thesis without the guidance and support of many people. I would like to thank my major professor Dr. M. Catherine Aime for her incredible generosity and for imparting to me some of her vast knowledge and expertise of mycology and phylogenetics. Her unflagging dedication to the field has been an inspiration and continues to motivate me to do my best work. -
Josiana Adelaide Vaz
Josiana Adelaide Vaz STUDY OF ANTIOXIDANT, ANTIPROLIFERATIVE AND APOPTOSIS-INDUCING PROPERTIES OF WILD MUSHROOMS FROM THE NORTHEAST OF PORTUGAL. ESTUDO DE PROPRIEDADES ANTIOXIDANTES, ANTIPROLIFERATIVAS E INDUTORAS DE APOPTOSE DE COGUMELOS SILVESTRES DO NORDESTE DE PORTUGAL. Tese do 3º Ciclo de Estudos Conducente ao Grau de Doutoramento em Ciências Farmacêuticas–Bioquímica, apresentada à Faculdade de Farmácia da Universidade do Porto. Orientadora: Isabel Cristina Fernandes Rodrigues Ferreira (Professora Adjunta c/ Agregação do Instituto Politécnico de Bragança) Co- Orientadoras: Maria Helena Vasconcelos Meehan (Professora Auxiliar da Faculdade de Farmácia da Universidade do Porto) Anabela Rodrigues Lourenço Martins (Professora Adjunta do Instituto Politécnico de Bragança) July, 2012 ACCORDING TO CURRENT LEGISLATION, ANY COPYING, PUBLICATION, OR USE OF THIS THESIS OR PARTS THEREOF SHALL NOT BE ALLOWED WITHOUT WRITTEN PERMISSION. ii FACULDADE DE FARMÁCIA DA UNIVERSIDADE DO PORTO STUDY OF ANTIOXIDANT, ANTIPROLIFERATIVE AND APOPTOSIS-INDUCING PROPERTIES OF WILD MUSHROOMS FROM THE NORTHEAST OF PORTUGAL. Josiana Adelaide Vaz iii The candidate performed the experimental work with a doctoral fellowship (SFRH/BD/43653/2008) supported by the Portuguese Foundation for Science and Technology (FCT), which also participated with grants to attend international meetings and for the graphical execution of this thesis. The Faculty of Pharmacy of the University of Porto (FFUP) (Portugal), Institute of Molecular Pathology and Immunology (IPATIMUP) (Portugal), Mountain Research Center (CIMO) (Portugal) and Center of Medicinal Chemistry- University of Porto (CEQUIMED-UP) provided the facilities and/or logistical supports. This work was also supported by the research project PTDC/AGR- ALI/110062/2009, financed by FCT and COMPETE/QREN/EU. Cover – photos kindly supplied by Juan Antonio Sanchez Rodríguez. -
Boletín Micológico De FAMCAL Una Contribución De FAMCAL a La Difusión De Los Conocimientos Micológicos En Castilla Y León Una Contribución De FAMCAL
Año Año 2011 2011 Nº6 Nº 6 Boletín Micológico de FAMCAL Una contribución de FAMCAL a la difusión de los conocimientos micológicos en Castilla y León Una contribución de FAMCAL Con la colaboración de Boletín Micológico de FAMCAL. Boletín Micológico de FAMCAL. Una contribución de FAMCAL a la difusión de los conocimientos micológicos en Castilla y León PORTADA INTERIOR Boletín Micológico de FAMCAL Una contribución de FAMCAL a la difusión de los conocimientos micológicos en Castilla y León COORDINADOR DEL BOLETÍN Luis Alberto Parra Sánchez COMITÉ EDITORIAL Rafael Aramendi Sánchez Agustín Caballero Moreno Rafael López Revuelta Jesús Martínez de la Hera Luis Alberto Parra Sánchez Juan Manuel Velasco Santos COMITÉ CIENTÍFICO ASESOR Luis Alberto Parra Sánchez Juan Manuel Velasco Santos Reservados todos los derechos. No está permitida la reproducción total o parcial de este libro, ni su tratamiento informático, ni la transmisión de ninguna forma o por cualquier medio, ya sea electrónico, mecánico, por fotocopia, por registro u otros métodos, sin el permiso previo y por escrito del titular del copyright. La Federación de Asociaciones Micológicas de Castilla y León no se responsabiliza de las opiniones expresadas en los artículos firmados. © Federación de Asociaciones Micológicas de Castilla y León (FAMCAL) Edita: Federación de Asociaciones Micológicas de Castilla y León (FAMCAL) http://www.famcal.es Colabora: Junta de Castilla y León. Consejería de Medio Ambiente Producción Editorial: NC Comunicación. Avda. Padre Isla, 70, 1ºB. 24002 León Tel. 902 910 002 E-mail: [email protected] http://www.nuevacomunicacion.com D.L.: Le-1011-06 ISSN: 1886-5984 Índice Índice Presentación ....................................................................................................................................................................................11 Favolaschia calocera, una especie de origen tropical recolectada en el País Vasco, por ARRILLAGA, P. -
1. Padil Species Factsheet Scientific Name: Common Name Image Library Partners for Smut Fungi of Australia Image Library
1. PaDIL Species Factsheet Scientific Name: Entyloma dahliae Syd. & P. Syd. Basidiomycota, Exobasidiomycetes, Entylomatales, Entylomataceae Common Name Dahlia Smut Live link: http://www.padil.gov.au/aus-smuts/Pest/Main/139992 Image Library Smut Fungi of Australia Live link: http://www.padil.gov.au/aus-smuts/ Partners for Smut Fungi of Australia image library Queensland Government https://www.daf.qld.gov.au/ 2. Species Information 2.1. Details Specimen Contact: Roger Shivas - [email protected] Author: Roger Shivas Citation: Roger Shivas (2010) Dahlia Smut(Entyloma dahliae )Updated on 11/24/2010 Available online: PaDIL - http://www.padil.gov.au Image Use: Free for use under the Creative Commons Attribution-NonCommercial 4.0 International (CC BY- NC 4.0) 2.2. URL Live link: http://www.padil.gov.au/aus-smuts/Pest/Main/139992 2.3. Facets Columella: absent Distribution: NSW, QLD, VIC Host Family: Asteraceae Peridium: absent Sorus position: leaves Sorus shape: indistinct (includes leaf spots) Spore balls: absent Spore mass texture: agglutinated Spore shape: globose or subglobose, irregular, ovoid to ellipsoidal Spore surface ornamentation: smooth Status: Native Australian Species Sterile cells: absent 2.4. Other Names Entyloma calendulae f. dahliae Sternon Entyloma calendulae f. dahliae Viégas Entyloma dahliae (Sternon) Cif. Entyloma unamunoi Cif. Entylomella dahliae Cif. ex Boerema & Hamers 2.5. Diagnostic Notes **Sori** in leaves as round or polygonal spots, at first pale blue-green, later dark brown and drying from the centre, 3–15 mm diam., or larger by fusion. **Spores** solitary or often in small groups or chains, globose, ovoid to irregular, 9.5–17.0 (–20) × 8–16 µm, subhyaline to golden yellow; wall smooth, 2-layered, 1–4 µm thick; outer layer often unevenly thickened. -
Smut Fungi (Ustilaginomycetes and Microbotryales, Basidiomycota) in Panama
Rev. Biol. Trop., 49(2): 411-428, 2001 www.ucr.ac.cr www.ots.ac.cr www.ots.duke.edu Smut fungi (Ustilaginomycetes and Microbotryales, Basidiomycota) in Panama Meike Piepenbring Lehrstuhl Spezielle Botanik/Mykologie, Botanisches Institut, Universität Tübingen, Auf der Morgenstelle 1, 72076 Tübingen, Germany. Fax: 0049 7071 295344 E-mail: [email protected] Received 6-V-2000. Corrected 30-X-2000. Accepted 31-X-2000. Abstract: This is the first publication dedicated to the diversity of smut fungi in Panama based on field work, the study of herbarium specimens, and references taken from literature. It includes smuts parasitizing cultivated and wild plants. The latter are mostly found in rural vegetation. Among the 24 species cited here, 14 species are recorded for the first time for Panama. One of them, Sporisorium ovarium, is observed for the first time in Central America. Entyloma spilanthis is found on the host species Acmella papposa var. macrophylla (Asteraceae) for the first time. Entyloma costaricense and Entyloma ecuadorense are considered synonyms of Entyloma compositarum and Entyloma spilanthis respectively. For the new conbination Sponsorium panamensis see note at the end of this publication. Descriptions of the species are complemented by some illustrations, a checklist, and a key. Key words: Checklist, neotropics, Panama, smut fungi, Sponsorium panamensis, Tilletiales, Ustilaginales Smut fungi (Ustilaginomycetes and Micro- literature (Zundel 1939, 1953, Toler et al. 1959, botryales, Urediniomycetes; Basidiomycota; Dennis 1970, Comstock et al. 1983). Bauer et al. 1997, 2001) are parasites of plants, The check list in the present publication is especially herbs belonging to the Poaceae and far from complete, being based on only about Cyperaceae. -
Aproximación Al Catálogo De Las Especies Del Orden Boletales (Basidiomycetes, Fungi) En Extremadura (España)
1255 Aproximación al Catálogo de las especies del orden Boletales (Basidiomycetes, Fungi) en Extremadura (España) FRANCISCO M. VÁZQUEZ P ARDO* SOLEDAD RAMOS MAQUEDA* ANA BELÉN LUCAS PIMIENTA* DIEGO PERAL PACHECO** En el presente trabajo se realiza una revisión taxonómica y nomenclatural de las especies, géneros y familias con las que cuenta el orden Boletales en Extremadura (España). En el estudio realizado se ponen de manifiesto errores nomenclaturales y taxonómicos para algunas de las especies y géneros previa- mente citados para el territorio extremeño. El catálogo que se presenta, contiene un total de 6 familias, 15 géneros, 70 especies y tres subespecies, frente a las más de 7 familias, 16 géneros y 80 especies previamente citadas. The revision about Extremadure’s Boletales (Spain) showed some nomenclatural and taxonomical mistakes in the species and genus cited before for Extremadure. The former checklist contained more than 7 families, 16 genus and 80 species, in opposite of the list reviewed by us with 6 families, 15 genus, 70 species and three subspecies. * Sección de Producción Forestal. Servicio de Investigación y Desarrollo Tecnológico. Consejería de Agricultura y Medio Ambiente. Ctra. De Portugal s/n 06800 Mérida (Badajoz). ** Historia de la Medicina. Faculta de Medicina. UEX. Avda. del Elvas s/n. 06071 Badajoz. Contacto: e-mail: [email protected] 1256 FRANCISCO M. VÁZQUEZ PARDO, SOLEDAD RAMOS MAQUEDA ANA BELÉN LUCAS PIMIENTA Y DIEGO PERAL PACHECO INTRODUCCIÓN La diversidad biológica con la que cuentan los espacios naturales de Extremadura, sólo se podrá valorar conociendo la riqueza biológica que presen- tan cada uno de sus reinos de seres vivos. -
Characterising Plant Pathogen Communities and Their Environmental Drivers at a National Scale
Lincoln University Digital Thesis Copyright Statement The digital copy of this thesis is protected by the Copyright Act 1994 (New Zealand). This thesis may be consulted by you, provided you comply with the provisions of the Act and the following conditions of use: you will use the copy only for the purposes of research or private study you will recognise the author's right to be identified as the author of the thesis and due acknowledgement will be made to the author where appropriate you will obtain the author's permission before publishing any material from the thesis. Characterising plant pathogen communities and their environmental drivers at a national scale A thesis submitted in partial fulfilment of the requirements for the Degree of Doctor of Philosophy at Lincoln University by Andreas Makiola Lincoln University, New Zealand 2019 General abstract Plant pathogens play a critical role for global food security, conservation of natural ecosystems and future resilience and sustainability of ecosystem services in general. Thus, it is crucial to understand the large-scale processes that shape plant pathogen communities. The recent drop in DNA sequencing costs offers, for the first time, the opportunity to study multiple plant pathogens simultaneously in their naturally occurring environment effectively at large scale. In this thesis, my aims were (1) to employ next-generation sequencing (NGS) based metabarcoding for the detection and identification of plant pathogens at the ecosystem scale in New Zealand, (2) to characterise plant pathogen communities, and (3) to determine the environmental drivers of these communities. First, I investigated the suitability of NGS for the detection, identification and quantification of plant pathogens using rust fungi as a model system. -
Phenolic Profile of Seventeen Portuguese Wild Mushrooms
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Biblioteca Digital do IPB 1 Phenolic profile of seventeen Portuguese wild mushrooms 2 3 Josiana A. Vaza,b,c,d, Lillian Barrosa, Anabela Martinse, Jorge Sá Moraise, 4 M. Helena Vasconcelosb,c Isabel C.F.R. Ferreiraa,e,* 5 6 a CIMO- Montain Research Centre, Bragança, Portugal. 7 bFFUP - Faculty of Pharmacy of the University of Porto, Portugal 8 cIPATIMUP - Institute of Molecular Pathology and Immunology of the University of Porto, 9 Portugal. 10 dCEQUIMED-UP - Center of Medicinal Chemistry, University of Porto, Portugal. 11 eEscola Superior Agrária, Instituto Politécnico de Bragança, Portugal. 12 13 14 *Corresponding author. e-mail: [email protected], tel. +351273303219, fax 15 +351273325405. 16 17 The work described has not been published previously; it is not under consideration for 18 publication elsewhere; its publication is approved by all authors and tacitly or explicitly by 19 the responsible authorities where the work was carried out; if accepted, it will not be 20 published elsewhere including electronically in the same form, in English or in any other 21 language, without the written consent of the copyright-holder. 22 23 1 24 ABSTRACT 25 Analysis of phenolic compounds in seventeen Portuguese wild mushroom species was 26 carried out by high-performance liquid chromatography coupled to photodiode array 27 detection (HPLC-DAD). Protocatechuic, p-hydroxybenzoic, p-coumaric and cinnamic acid 28 were found and quantified. Fistulina hepatica showed the highest phenolic acids 29 concentration (111.72 mg/Kg, dw) due to the significant contribution of protocatechuic 30 (67.62 mg/Kg) and p-hydroxybenzoic (41.92 mg/kg) acids. -
Phylogenetic Assessment of Global Suillus ITS Sequences Supports Morphologically Defined Species and Reveals Synonymous and Undescribed Taxa
Mycologia, 108(6), 2016, pp. 1216–1228. DOI: 10.3852/16-106 # 2016 by The Mycological Society of America, Lawrence, KS 66044-8897 Phylogenetic assessment of global Suillus ITS sequences supports morphologically defined species and reveals synonymous and undescribed taxa Nhu H. Nguyen1 Collectively, this comprehensive genus-level phyloge- Department of Tropical Plant and Soil Sciences, University netic integration of currently available Suillus ITS ‘ ‘ of Hawai iatMa¯noa, Honolulu, Hawai i 96822 molecular data and metadata will aid future taxonomic Else C. Vellinga and ecological work on an important group of ectomy- Thomas D. Bruns corrhizal fungi. Department of Plant and Microbial Biology, University of Key words: Boletales, bolete, geography, molecular California, Berkeley, California 94720 phylogenetics, Suillaceae, suilloid, systematics, taxonomy Peter G. Kennedy INTRODUCTION Departments of Plant Biology and Ecology, Evolution, and Behavior, University of Minnesota, Saint Paul, The genus Suillus Gray comprises approximately 100 Minnesota 55108 mushroom-forming species that are widely distributed throughout the Northern Hemisphere. Suillus species associate almost exclusively with members of the family Abstract: The genus Suillus represents one of the most Pinaceae and exhibit strong patterns of host specificity recognizable groups of mushrooms in conifer forests among different genera (Smith and Thiers 1964a, throughout the Northern Hemisphere. Although for Klofac 2013). They can also be found where hosts decades the genus has been relatively well defined mor- have been planted and have subsequently invaded in phologically, previous molecular phylogenetic assess- the Southern Hemisphere (Chapela et al. 2001, Dickie ments have provided important yet preliminary insights et al. 2010, Walbert et al. 2010, Hayward et al. -
Omics in Soil Science
creativepro.com Omics in Soil Science Soil metagenome Microbial proteomic Strain resolution databases proteomic responses Strains Y O Q E X X M G K P I D T N U DPPPV DTDGN ADANY J L A F LPANR GGGLT PGHGR RCPLF VSQEA DGQRD C Z B M E H GLPVR IAPHG GAPSD W KIIRL STDVR ISFRA S G R YTTCV QSTEW HIDSE LVSGR RHVIT GPVRD PSPSG RENAF RIEKY OTUs-COGs KEGG Edited by Paolo Nannipieri Giacomo Pietramellara and Caister Academic Press Giancarlo Renella Omics in Soil Science Edited by Paolo Nannipieri Giacomo Pietramellara and Giancarlo Renella Department of Agrifood Production and Environmental Sciences University of Florence Italy Caister Academic Press Copyright © 2014 Caister Academic Press Norfolk, UK www.caister.com British Library Cataloguing-in-Publication Data A catalogue record for this book is available from the British Library ISBN: 978-1-908230-32-4 (hardback) ISBN: 978-1-908230-94-2 (ebook) Description or mention of instrumentation, software, or other products in this book does not imply endorsement by the author or publisher. The author and publisher do not assume responsibility for the validity of any products or procedures mentioned or described in this book or for the consequences of their use. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, without the prior permission of the publisher. No claim to original U.S. Government works. Cover design adapted from Figure 6.1. Printed and bound in Great Britain Contents Contributors v Preface ix 1 Soil as a Biological System 1 Paolo Nannipieri, Giacomo Pietramellara and Giancarlo Renella 2 Functional Genomics Analysis of Key Bacterial Traits Involved in Rhizosphere Competence During Microbial–Host Interactions 9 Matthieu Barret, John P.