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Synergistic Use of Exo VII Inhibitors And Quinolone For Treating Bacterial Summary (1024-character limit) Scientists at the National Cancer Institute (NCI) have discovered a bacterial exonuclease VII (ExoVII) inhibitor that increases the potency of widely used quinolone antibiotics targeting prokaryotic type IIA . NCI seeks research co-development partners and/or licensees for the development of ExoVII inhibitors as new adjuvants to boost the efficacy of quinolone antibiotics and/or restore the susceptibility of resistant bacteria.

NIH Reference Number E-171-2020

Product Type Therapeutics

Keywords Antibiotic Adjuvants, Exonuclease VII, ExoVII, Antibiotic Resistance, Antibacterial, Infection, DNA gyrase, TOPO IV, Poisons, Quinolone, Pommier

Collaboration Opportunity This invention is available for licensing and co-development.

Contact Michael Salgaller, Ph.D. NCI - National Cancer Institute

240-276-5476

[email protected]

Description of Technology

Topoisomerase poisons, such as quinolone antibiotics, are widely used as anticancer and antibiotics. Quinolone antibiotics act by trapping prokaryotic type IIA topoisomerases (DNA gyrase and TOPO IV), resulting in irreversible topoisomerase cleavage complexes. However, current U.S. Food and Administration (FDA) guidance reserves the use of quinolones for the most serious bacterial due to their associated side effects and to limit the occurrence of drug-resistant bacterial strains. Resistance to available antibiotics in is a global challenge as the number of drug-resistant strains increased dramatically each year.

Combination of antibiotics with antibiotic adjuvants offers a productive strategy to address the

NCI Technology Transfer Center https://techtransfer.cancer.gov/pdf/e-171-2020.pd f widespread emergence of antibiotic-resistant strains. Exonuclease VII (ExoVII) repairs quinolone- induced DNA damage by excising the tyrosyl-DNA linkage between DNA and trapped DNA gyrase, an essential prokaryotic type II A topoisomerase. Consequently, inactivation of ExoVII results in hypersensitivity to quinolones. Researchers at the NCI have discovered ExoVII inhibitors that synergize with the activity of the quinolone antibiotic . These inhibitors present strong potential as antibiotic adjuvants increasing the potency of quinolones – particularly against quinolone- resistant bacterial strains. In addition, the combination of ExoVII inhibitors with quinolones may allow reduction – potentially decreasing side-effects.

The NCI seeks co-development partners or licensees to further develop the novel ExoVII inhibitor(s) as antibiotic adjuvants for enhancing the efficacy of quinolone antibiotics, particularly in quinolone- resistant bacterial strains.

Potential Commercial Applications Antibiotic adjuvant in combination with ciprofloxacin and other quinolone antibiotics Antibiotic adjuvant in combination with other topoisomerase poisons

Competitive Advantages ExoVII inhibitor increases the efficacy of quinolone antibiotics, allowing dose reduction for quinolones and potentially decrease side-effects and be well-tolerated Potentially overcome bacterial resistance to quinolones Lack of inhibitory activity against human tyrosyl-DNA phosphodiesterase (TDP) suggests that inhibitors targeting prokaryotic ExoVII might decrease side-effects and be well-tolerated

Inventor(s)

Yves Pommier MD PhD (NCI), Shar-yin Naomi Huang PhD (NCI), Brianna B Mitchell BS (NCI)

Development Stage Pre-clinical (in vivo)

Publications

Huang SN, et al. Exonuclease VII repairs quinolone-induced damage by resolving DNA gyrase cleavage complexes. [PMID 33658195]

Patent Status U.S. Provisional: U.S. Provisional Patent Application Number 63/129,217, Filed 22 Dec 2020

Therapeutic Area Infectious Diseases

NCI Technology Transfer Center https://techtransfer.cancer.gov/pdf/e-171-2020.pd f