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Breaking with Tradition: Redefining Measures for Diet Description with a Case Study of the Aleutian Skate Bathyraja Aleutica (Gilbert 1896)
Environ Biol Fish (2012) 95:3–20 DOI 10.1007/s10641-011-9959-z Breaking with tradition: redefining measures for diet description with a case study of the Aleutian skate Bathyraja aleutica (Gilbert 1896) Simon C. Brown & Joseph J. Bizzarro & Gregor M. Cailliet & David A. Ebert Received: 1 September 2010 /Accepted: 27 October 2011 /Published online: 16 November 2011 # Springer Science+Business Media B.V. 2011 Abstract Characterization of fish diets from stomach Aleutian skate Bathyraja aleutica from specimens content analysis commonly involves the calculation of collected from three ecoregions of the northern Gulf multiple relative measures of prey quantity (%N,%W,% of Alaska (GOA) continental shelf during June- FO), and their combination in the standardized Index of September 2005–2007. Aleutian skate were found to Relative Importance (%IRI). Examining the underlying primarily consume the commonly abundant benthic structure of dietary data matrices reveals interdependen- crustaceans, northern pink shrimp Pandalus eous and cies among diet measures, and obviates the advantageous Tanner crab Chionoecetes bairdi, and secondarily use of underused prey-specific measures to diet charac- consume various teleost fishes. Multivariate variance terization. With these interdependencies clearly realized partitioning by Redundancy Analysis revealed spa- as formal mathematical expressions, we proceed to tially driven differences in the diet to be as influential isolate algebraically, the inherent bias in %IRI, and as skate size, sex, and depth of capture. Euphausiids provide a correction for it by substituting traditional and other mid-water prey in the diet were strongly measures with prey-specific measures. The resultant new associated with the Shelikof Strait region during 2007 index, the Prey-Specific Index of Relative Importance (% that may be explained by atypical marine climate PSIRI), is introduced and recommended to replace %IRI conditions during that year. -
XIV. Appendices
Appendix 1, Page 1 XIV. Appendices Appendix 1. Vertebrate Species of Alaska1 * Threatened/Endangered Fishes Scientific Name Common Name Eptatretus deani black hagfish Lampetra tridentata Pacific lamprey Lampetra camtschatica Arctic lamprey Lampetra alaskense Alaskan brook lamprey Lampetra ayresii river lamprey Lampetra richardsoni western brook lamprey Hydrolagus colliei spotted ratfish Prionace glauca blue shark Apristurus brunneus brown cat shark Lamna ditropis salmon shark Carcharodon carcharias white shark Cetorhinus maximus basking shark Hexanchus griseus bluntnose sixgill shark Somniosus pacificus Pacific sleeper shark Squalus acanthias spiny dogfish Raja binoculata big skate Raja rhina longnose skate Bathyraja parmifera Alaska skate Bathyraja aleutica Aleutian skate Bathyraja interrupta sandpaper skate Bathyraja lindbergi Commander skate Bathyraja abyssicola deepsea skate Bathyraja maculata whiteblotched skate Bathyraja minispinosa whitebrow skate Bathyraja trachura roughtail skate Bathyraja taranetzi mud skate Bathyraja violacea Okhotsk skate Acipenser medirostris green sturgeon Acipenser transmontanus white sturgeon Polyacanthonotus challengeri longnose tapirfish Synaphobranchus affinis slope cutthroat eel Histiobranchus bathybius deepwater cutthroat eel Avocettina infans blackline snipe eel Nemichthys scolopaceus slender snipe eel Alosa sapidissima American shad Clupea pallasii Pacific herring 1 This appendix lists the vertebrate species of Alaska, but it does not include subspecies, even though some of those are featured in the CWCS. -
Range Extensions and New Records from Alaska and British Columbia
Range Extensions and New Records from Alaska and British Columbia for Two Skates, Bathyraja Spinosissima and Bathyraja Microtrachys Authors: James W Orr, Duane E Stevenson, Gavin Hanke, Ingrid B Spies, James A Boutillier, et. al. Source: Northwestern Naturalist, 100(1) : 37-47 Published By: Society for Northwestern Vertebrate Biology URL: https://doi.org/10.1898/NWN18-21 BioOne Complete (complete.BioOne.org) is a full-text database of 200 subscribed and open-access titles in the biological, ecological, and environmental sciences published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Complete website, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/terms-of-use. Usage of BioOne Complete content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Downloaded From: https://bioone.org/journals/Northwestern-Naturalist on 24 Jul 2019 Terms of Use: https://bioone.org/terms-of-use Access provided by National Oceanic and Atmospheric Administration Central Library GENERAL NOTES NORTHWESTERN NATURALIST 100:37–47 SPRING 2019 RANGE EXTENSIONS AND NEW RECORDS FROM ALASKA AND BRITISH COLUMBIA FOR TWO SKATES, BATHYRAJA SPINOSISSIMA AND BATHYRAJA MICROTRACHYS JAMES WORR,DUANE ESTEVENSON,GAVIN HANKE,INGRID BSPIES,JAMES A BOUTILLIER, AND GERALD RHOFF ABSTRACT—Recent deep-water surveys of the conti- identified 10 species of skates in 4 genera (Ebert nental slope in the Bering Sea and the eastern North 2003; Pietsch and Orr 2015; King and others in Pacific, conducted by the US National Marine Fisheries press; Table 1). -
Recent Contributions to the Knowledge of the Skates of Alaska by Duane E
FEATURE Recent Contributions to the Knowledge of the Skates of Alaska by Duane E. Stevenson and James W. Orr Figure 1. Raja binoculata (big skate). Photo by Duane Stevenson. he fish family Rajidae, commonly known imately 30 species worldwide and a North Pacific as the skates, includes about 280 species of assemblage of 6 species ranging from the Gulf of primarily benthic fishes found throughout California to the Bering Sea and into the western Tthe world’s oceans from tropical to cold temperate North Pacific. This North Pacific Assemblage is latitudes. The fishes of Alaska (Mecklenburg et al., thought to be a cluster of closely related species and 2002), the most recent inventory of Alaska’s fishes, will probably be recognized as a separate genus in lists 12 species of skates known to occur in the Gulf the future. The genus Bathyraja, also known as the of Alaska, Aleutian Islands, and Bering Sea from “soft-snout” skates due to their flexible rostral car- the intertidal zone to depths of over 1500 m, and tilage, includes over 40 species distributed through- at least 2 other species have been discovered in the out the world’s oceans. Bathyraja is the most broadly region since the publication of that volume as de- distributed as well as the most diverse of all the scribed in Bathyraja mariposa: a new species of skate skate genera, and the greatest diversity of Bathyraja (Rajidae: Arhynchobatinae) from the Aleutian Islands occurs in the North Pacific. The majority of Alaska’s (Stevenson et al., 2004a) and New records of two deep- skate species are included in this genus, although water skate species from the Bering Sea (Stevenson and some authors include one or two of the species in Orr, submitted). -
Bathyraja Panthera, a New Species of Skate (Rajidae: Arhynchobatinae) from the Western Aleutian Islands, and Resurrection
NOAA Professional Paper NMFS 11 U.S. Department of Commerce March 2011 Bathyraja panthera, a new species of skate (Rajidae: Arhynchobatinae) from the western Aleutian Islands, and resurrection of the subgenus James W. Orr Duane E. Stevenson Arctoraja Ishiyama Gerald R. Hoff Ingrid Spies John D. McEachran U.S. Department of Commerce NOAA Professional Gary Locke Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Jane Lubchenco, Ph.D. Scientific Editor Administrator of NOAA Richard D. Brodeur, Ph.D. Associate Editor National Marine Julie Scheurer Fisheries Service Eric C. Schwaab National Marine Fisheries Service Assistant Administrator Northwest Fisheries Science Center for Fisheries 2030 S. Marine Science Dr. Newport, Oregon 97365-5296 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese, Ph.D. National Marine Fisheries Service James W. Orr, Ph.D. National Marine Fisheries Service Bruce L. Wing, Ph.D. National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is published by the Scientific Publications Office, National Marine Fisheries Service, The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original NOAA, 7600 Sand Point Way NE, research reports, taxonomic keys, species synopses, flora and fauna studies, and data-in- Seattle, WA 98115. tensive reports on investigations in fishery science, engineering, and economics. Copies The Secretary of Commerce has determined that the publication of of the NOAA Professional Paper NMFS series are available free in limited numbers to this series is necessary in the transac- government agencies, both federal and state. -
Conclusions GRS 1 3 5 6 8 9 10 12 16 18 20 21 31 35 36 38 40 42 45 GREENLAND SEA
a a b c d e a) b) c) d) e) Lynghammar University of Tromsø, Norway, A., Christiansen University of Washington,, J. USAS., Gallucci Murmansk Marine, V. BiologicalF., Karamushko Institute, Russia California, O. V., AcademyMecklenburg of Sciences, USA, C. Natural W. History& Møller Museum ,of P. Denmark R. Contact: [email protected] introduction The sea ice cover decreases and human activity increases in Arctic waters. Fisheries (by-catch issues), shipping and petroleum exploita- tion (pollution issues) make it imperative to establish biological base- OCCURRENCE OF lines for the marine fishes inhabiting the Arctic Ocean and adjacent seas (AOAS). As a first step towards credible conservation actions for the Arctic marine fish faunae, we examine the species-richness of chondrich- thyan fishes (class Chondrichthyes) pertaining to 16 regions within the AOAS: chimaeras, sharks and skates. CHONDRICHTHYAN materials and methods • Voucher specimens from Natural History Collections IN THE ARCTIC OCEAN • Annotated checklists (see selected references) • The CAFF Database on Arctic marine fishes (Christiansen et al., in AND ADJACENT SEAS progress) FISHES Only presence and absence data are considered, as reliable abundance data lack for most species. Occurrences known only from floating or beach-cast carcasses, such as Pacific sleeper shark (no. 17) and Alaska skate (no. 29) in the Chukchi Sea, are not considered conclusive evidence of presence and are not included. CHIMAERIFORMES HEXANCHIFORMES RAJIFORMES Chimaeridae - ratfishes Chlamydoselachidae -
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Vol. 669: 121–138, 2021 MARINE ECOLOGY PROGRESS SERIES Published July 8 https://doi.org/10.3354/meps13736 Mar Ecol Prog Ser OPEN ACCESS Skate egg nursery areas support genetic diversity of Alaska and Aleutian skates in the Bering Sea Ingrid Spies1,*, James W. Orr2, Duane E. Stevenson2, Pamela Goddard2, Gerald Hoff2, Jared Guthridge3, Myles Hollowed1, Christopher Rooper2,4 1Resource Ecology and Fisheries Management Division, Alaska Fisheries Science Center, 7600 Sand Point Way NE, Seattle, WA 98115, USA 2Resource Assessment and Conservation Engineering Division, Alaska Fisheries Science Center, 7600 Sand Point Way NE, Seattle, WA 98115, USA 3Alaska Sea Life Center, PO Box 1329, 301 Railway Ave, Seward, AK 99664, USA 4Present address: Stock Assessment and Research Division, Pacific Biological Station, Fisheries and Oceans Canada, 3190 Hammond Bay Road, Nanaimo, British Columbia V9T 6N7, Canada ABSTRACT: Skate egg case nursery sites are specific locations on the ocean floor where some species of skates deposit egg cases to incubate for up to 5 yr until hatching. We examined genetic diversity within and among skate egg nursery sites of the Alaska skate Bathyraja parmifera and the Aleutian skate B. aleutica in the eastern Bering Sea to gain a better understanding of how skates utilize these areas. Restriction-site associated DNA (RAD) sequencing libraries were used to obtain single nucleotide polymorphism (SNP) datasets for B. parmifera (5285 SNPs) and B. aleu- tica (3309 SNPs). We found evidence for significant genetic differentiation among all B. parmifera and B. aleutica nursery areas, with 1 exception. B. parmifera from the spatially proximate Pribilof and Bering Canyons were genetically similar, suggesting that this may represent a large contigu- ous nursery area. -
Amblyraja, Bathyrajaandraja: Rajidae
Journal of Fish Biology (2006) 69 (Supplement B), 283–292 #doi:10.1111/j.1095-8649.2006.01286.x, available online at http://www.blackwell-synergy.com DNA-based identification of Alaska skates (Amblyraja, Bathyraja and Raja: Rajidae) using cytochrome c oxidase subunit I (coI) variation I. B. SPIES,S.GAICHAS,D.E.STEVENSON,J.W.ORR AND M. F. CANINO* NOAA, National Marine Fisheries Service, Alaska Fisheries Science Center, 7600 Sand Point Way NE, Seattle, WA 98115, U.S.A. (Received 13 February 2006, Accepted 4 August 2006) Variation at the mitochondrial cytochrome c oxidase subunit I (mt-COI) gene was examined in 15 species of North Pacific skates. Thirteen species had unique sequences, indicating that a DNA-based barcoding approach may be useful for species identification. Journal compilation # 2006 The Fisheries Society of the British Isles No claim to original US government works Key words: coI; cytochrome c oxidase subunit I; DNA barcode; mitochondrial DNA; species identification; skates. The skates of the North Pacific Ocean and Bering Sea (family Rajidae) are represented by a complex of 15 species in three genera, Raja L., Amblyraja Malm, 1877 and Bathyraja Ishiyama, 1958 (Mecklenburg et al., 2002; Stevenson et al., 2004; Stevenson & Orr, 2005). The genus Raja, known as ‘stiff-snout’ skates due to a robust rostral cartilage, is represented by two spe- cies (Raja rhina Jordan and Gilbert, 1880 and Raja binoculata Girard, 1855). Twelve species are presently recognized in Bathyraja, the genus of ‘soft-snout’ skates possessing a flexible rostral cartilage (Table I). A third genus repre- sented by the deepwater species Amblyraja badia (Garman, 1899) was recently discovered in Alaska (Stevenson & Orr, 2005). -
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Vol. 670: 155–166, 2021 MARINE ECOLOGY PROGRESS SERIES Published July 22 https://doi.org/10.3354/meps13768 Mar Ecol Prog Ser OPEN ACCESS Genetic evidence from embryos suggests a new species of skate related to Bathyraja parmifera (Rajiformes: Arhynchobatidae) in the Bering Sea Ingrid Spies1,*, James W. Orr2, Duane E. Stevenson2, Pamela Goddard2, Gerald R. Hoff2, Jared Guthridge3, Christopher N. Rooper4 1Resource Ecology and Fisheries Management Division, Alaska Fisheries Science Center, 7600 Sand Point Way NE, Seattle, WA 98115, USA 2Resource Assessment and Conservation Engineering Division, Alaska Fisheries Science Center, 7600 Sand Point Way NE, Seattle, WA 98115, USA 3Alaska SeaLife Center, PO Box 1329, 301 Railway Ave, Seward, AK 99664, USA 4Stock Assessment and Research Division, Pacific Biological Station, Fisheries and Oceans Canada, 3190 Hammond Bay Road, Nanaimo, BC V9T 6N7, Canada ABSTRACT: Several new species of oviparous skates of the genus Bathyraja have been identified over the past 2 decades, yet it is possible that a complete understanding of species diversity among this group has not been achieved. We used genetics and morphology to screen for the presence of species-level differentiation among embryos from nursery areas in the eastern Bering Sea that were initially identified as the Alaska skate B. parmifera. A sample of 57 embryos from Pervenets Canyon differed significantly at single nucleotide polymorphism loci from 297 other B. parmifera samples, and differences were on the order of those observed between B. parmifera and the leopard skate B. panthera. This sample of embryos was similar to B. parmifera at the cyto - chrome c oxidase subunit I (COI) mitochondrial locus. -
1 CWU Comparative Osteology Collection, List of Specimens
CWU Comparative Osteology Collection, List of Specimens List updated November 2019 0-CWU-Collection-List.docx Specimens collected primarily from North American mid-continent and coastal Alaska for zooarchaeological research and teaching purposes. Curated at the Zooarchaeology Laboratory, Department of Anthropology, Central Washington University, under the direction of Dr. Pat Lubinski, [email protected]. Facility is located in Dean Hall Room 222 at CWU’s campus in Ellensburg, Washington. Numbers on right margin provide a count of complete or near-complete specimens in the collection. Specimens on loan from other institutions are not listed. There may also be a listing of mount (commercially mounted articulated skeletons), part (partial skeletons), skull (skulls), or * (in freezer but not yet processed). Vertebrate specimens in taxonomic order, then invertebrates. Taxonomy follows the Integrated Taxonomic Information System online (www.itis.gov) as of June 2016 unless otherwise noted. VERTEBRATES: Phylum Chordata, Class Petromyzontida (lampreys) Order Petromyzontiformes Family Petromyzontidae: Pacific lamprey ............................................................. Entosphenus tridentatus.................................... 1 Phylum Chordata, Class Chondrichthyes (cartilaginous fishes) unidentified shark teeth ........................................................ ........................................................................... 3 Order Squaliformes Family Squalidae Spiny dogfish ........................................................ -
The Conservation Status of North American, Central American, and Caribbean Chondrichthyans the Conservation Status Of
The Conservation Status of North American, Central American, and Caribbean Chondrichthyans The Conservation Status of Edited by The Conservation Status of North American, Central and Caribbean Chondrichthyans North American, Central American, Peter M. Kyne, John K. Carlson, David A. Ebert, Sonja V. Fordham, Joseph J. Bizzarro, Rachel T. Graham, David W. Kulka, Emily E. Tewes, Lucy R. Harrison and Nicholas K. Dulvy L.R. Harrison and N.K. Dulvy E.E. Tewes, Kulka, D.W. Graham, R.T. Bizzarro, J.J. Fordham, Ebert, S.V. Carlson, D.A. J.K. Kyne, P.M. Edited by and Caribbean Chondrichthyans Executive Summary This report from the IUCN Shark Specialist Group includes the first compilation of conservation status assessments for the 282 chondrichthyan species (sharks, rays, and chimaeras) recorded from North American, Central American, and Caribbean waters. The status and needs of those species assessed against the IUCN Red List of Threatened Species criteria as threatened (Critically Endangered, Endangered, and Vulnerable) are highlighted. An overview of regional issues and a discussion of current and future management measures are also presented. A primary aim of the report is to inform the development of chondrichthyan research, conservation, and management priorities for the North American, Central American, and Caribbean region. Results show that 13.5% of chondrichthyans occurring in the region qualify for one of the three threatened categories. These species face an extremely high risk of extinction in the wild (Critically Endangered; 1.4%), a very high risk of extinction in the wild (Endangered; 1.8%), or a high risk of extinction in the wild (Vulnerable; 10.3%). -
Report of the Workshop on Deep-Sea Species Identification, Rome, 2–4 December 2009
FAO Fisheries and Aquaculture Report No. 947 FIRF/R947 (En) ISSN 2070-6987 Report of the WORKSHOP ON DEEP-SEA SPECIES IDENTIFICATION Rome, Italy, 2–4 December 2009 Cover photo: An aggregation of the hexactinellid sponge Poliopogon amadou at the Great Meteor seamount, Northeast Atlantic. Courtesy of the Task Group for Maritime Affairs, Estrutura de Missão para os Assuntos do Mar – Portugal. Copies of FAO publications can be requested from: Sales and Marketing Group Office of Knowledge Exchange, Research and Extension Food and Agriculture Organization of the United Nations E-mail: [email protected] Fax: +39 06 57053360 Web site: www.fao.org/icatalog/inter-e.htm FAO Fisheries and Aquaculture Report No. 947 FIRF/R947 (En) Report of the WORKSHOP ON DEEP-SEA SPECIES IDENTIFICATION Rome, Italy, 2–4 December 2009 FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2011 The designations employed and the presentation of material in this Information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. The views expressed in this information product are those of the author(s) and do not necessarily reflect the views of FAO.