Report of the Workshop on Deep-Sea Species Identification, Rome, 2–4 December 2009
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Notoraja Martinezi Sp. Nov., a New Species of Deepwater Skate and The
Zootaxa 4098 (1): 179–190 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2016 Magnolia Press ISSN 1175-5334 (online edition) http://doi.org/10.11646/zootaxa.4098.1.9 http://zoobank.org/urn:lsid:zoobank.org:pub:C7826AC7-6493-42D3-A0A4-89FEBB5AB3E3 Notoraja martinezi sp. nov., a new species of deepwater skate and the first record of the genus Notoraja Ishiyama, 1958 (Rajiformes: Arhynchobatidae) from the eastern Pacific Ocean FRANCISCO J. CONCHA1,2,7, DAVID A. EBERT3,4,5 & DOUGLAS J. LONG4,6 1Department of Ecology & Evolutionary Biology, University of Connecticut. 75 North Eagleville Road – Unit 3043 Storrs, CT, 06269, USA. E-mail: [email protected] 2Facultad de Ciencias del Mar y de Recursos Naturales, Universidad de Valparaíso. Av. Borgoño 16344, Viña del Mar, Chile. 3Pacific Shark Research Center, Moss Landing Marine Laboratories, Moss Landing, CA 95039, USA. 4Department of Ichthyology, California Academy of Sciences, 55 Music Concourse Drive, San Francisco, CA. 94118, USA. 5South African Institute for Aquatic Biodiversity, Private Bag 1015, Grahamstown, 6140, South Africa. E-mail: [email protected] state.edu. 6Department of Biology, St. Mary’s College, 1928 St. Mary’s Road, Moraga, California 94575. E-mail: [email protected] 7Corresponding author Abstract A new arhynchobatid skate, Notoraja martinezi, sp. nov., is described from four specimens collected from the eastern Central Pacific from Costa Rica to Ecuador and between depths of 1256–1472 m. The new species is placed in the genus Notoraja based on the long and flexible rostrum and its proportionally long tail with respect to total length. -
The Fishing and Illegal Trade of the Angelshark DNA Barcoding
Fisheries Research 206 (2018) 193–197 Contents lists available at ScienceDirect Fisheries Research journal homepage: www.elsevier.com/locate/fishres The fishing and illegal trade of the angelshark: DNA barcoding against T misleading identifications ⁎ Ingrid Vasconcellos Bunholia, Bruno Lopes da Silva Ferrettea,b, , Juliana Beltramin De Biasia,b, Carolina de Oliveira Magalhãesa,b, Matheus Marcos Rotundoc, Claudio Oliveirab, Fausto Forestib, Fernando Fernandes Mendonçaa a Laboratório de Genética Pesqueira e Conservação (GenPesC), Instituto do Mar (IMar), Universidade Federal de São Paulo (UNIFESP), Santos, SP, 11070-102, Brazil b Laboratório de Biologia e Genética de Peixes (LBGP), Instituto de Biociências de Botucatu (IBB), Universidade Estadual Paulista (UNESP), Botucatu, SP, 18618-689, Brazil c Acervo Zoológico da Universidade Santa Cecília (AZUSC), Universidade Santa Cecília (Unisanta), Santos, SP, 11045-907, Brazil ARTICLE INFO ABSTRACT Handled by J Viñas Morphological identification in the field can be extremely difficult considering fragmentation of species for trade Keywords: or high similarity between congeneric species. In this context, the shark group belonging to the genus Squatina is Conservation composed of three species distributed in the southern part of the western Atlantic. These three species are Endangered species classified in the IUCN Red List as endangered, and they are currently protected under Brazilian law, which Fishing monitoring prohibits fishing and trade. Molecular genetic tools are now used for practical taxonomic identification, parti- Forensic genetics cularly in cases where morphological observation is prevented, e.g., during fish processing. Consequently, DNA fi Mislabeling identi cation barcoding was used in the present study to track potential crimes against the landing and trade of endangered species along the São Paulo coastline, in particular Squatina guggenheim (n = 75) and S. -
Bibliography Database of Living/Fossil Sharks, Rays and Chimaeras (Chondrichthyes: Elasmobranchii, Holocephali) Papers of the Year 2016
www.shark-references.com Version 13.01.2017 Bibliography database of living/fossil sharks, rays and chimaeras (Chondrichthyes: Elasmobranchii, Holocephali) Papers of the year 2016 published by Jürgen Pollerspöck, Benediktinerring 34, 94569 Stephansposching, Germany and Nicolas Straube, Munich, Germany ISSN: 2195-6499 copyright by the authors 1 please inform us about missing papers: [email protected] www.shark-references.com Version 13.01.2017 Abstract: This paper contains a collection of 803 citations (no conference abstracts) on topics related to extant and extinct Chondrichthyes (sharks, rays, and chimaeras) as well as a list of Chondrichthyan species and hosted parasites newly described in 2016. The list is the result of regular queries in numerous journals, books and online publications. It provides a complete list of publication citations as well as a database report containing rearranged subsets of the list sorted by the keyword statistics, extant and extinct genera and species descriptions from the years 2000 to 2016, list of descriptions of extinct and extant species from 2016, parasitology, reproduction, distribution, diet, conservation, and taxonomy. The paper is intended to be consulted for information. In addition, we provide information on the geographic and depth distribution of newly described species, i.e. the type specimens from the year 1990- 2016 in a hot spot analysis. Please note that the content of this paper has been compiled to the best of our abilities based on current knowledge and practice, however, -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Appendix: Some Important Early Collections of West Indian Type Specimens, with Historical Notes
Appendix: Some important early collections of West Indian type specimens, with historical notes Duchassaing & Michelotti, 1864 between 1841 and 1864, we gain additional information concerning the sponge memoir, starting with the letter dated 8 May 1855. Jacob Gysbert Samuel van Breda A biography of Placide Duchassaing de Fonbressin was (1788-1867) was professor of botany in Franeker (Hol published by his friend Sagot (1873). Although an aristo land), of botany and zoology in Gent (Belgium), and crat by birth, as we learn from Michelotti's last extant then of zoology and geology in Leyden. Later he went to letter to van Breda, Duchassaing did not add de Fon Haarlem, where he was secretary of the Hollandsche bressin to his name until 1864. Duchassaing was born Maatschappij der Wetenschappen, curator of its cabinet around 1819 on Guadeloupe, in a French-Creole family of natural history, and director of Teyler's Museum of of planters. He was sent to school in Paris, first to the minerals, fossils and physical instruments. Van Breda Lycee Louis-le-Grand, then to University. He finished traveled extensively in Europe collecting fossils, especial his studies in 1844 with a doctorate in medicine and two ly in Italy. Michelotti exchanged collections of fossils additional theses in geology and zoology. He then settled with him over a long period of time, and was received as on Guadeloupe as physician. Because of social unrest foreign member of the Hollandsche Maatschappij der after the freeing of native labor, he left Guadeloupe W etenschappen in 1842. The two chief papers of Miche around 1848, and visited several islands of the Antilles lotti on fossils were published by the Hollandsche Maat (notably Nevis, Sint Eustatius, St. -
Checklist of Fish and Invertebrates Listed in the CITES Appendices
JOINTS NATURE \=^ CONSERVATION COMMITTEE Checklist of fish and mvertebrates Usted in the CITES appendices JNCC REPORT (SSN0963-«OStl JOINT NATURE CONSERVATION COMMITTEE Report distribution Report Number: No. 238 Contract Number/JNCC project number: F7 1-12-332 Date received: 9 June 1995 Report tide: Checklist of fish and invertebrates listed in the CITES appendices Contract tide: Revised Checklists of CITES species database Contractor: World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 ODL Comments: A further fish and invertebrate edition in the Checklist series begun by NCC in 1979, revised and brought up to date with current CITES listings Restrictions: Distribution: JNCC report collection 2 copies Nature Conservancy Council for England, HQ, Library 1 copy Scottish Natural Heritage, HQ, Library 1 copy Countryside Council for Wales, HQ, Library 1 copy A T Smail, Copyright Libraries Agent, 100 Euston Road, London, NWl 2HQ 5 copies British Library, Legal Deposit Office, Boston Spa, Wetherby, West Yorkshire, LS23 7BQ 1 copy Chadwick-Healey Ltd, Cambridge Place, Cambridge, CB2 INR 1 copy BIOSIS UK, Garforth House, 54 Michlegate, York, YOl ILF 1 copy CITES Management and Scientific Authorities of EC Member States total 30 copies CITES Authorities, UK Dependencies total 13 copies CITES Secretariat 5 copies CITES Animals Committee chairman 1 copy European Commission DG Xl/D/2 1 copy World Conservation Monitoring Centre 20 copies TRAFFIC International 5 copies Animal Quarantine Station, Heathrow 1 copy Department of the Environment (GWD) 5 copies Foreign & Commonwealth Office (ESED) 1 copy HM Customs & Excise 3 copies M Bradley Taylor (ACPO) 1 copy ^\(\\ Joint Nature Conservation Committee Report No. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
OCS Study BOEM 2017-024
OCS Study BOEM 2017-024 Deepwater Reconnaissance of Potentially Sensitive Biological Features Surrounding Shelf-Edge Topographical Banks in the Northern Gulf of Mexico U.S. Department of the Interior Bureau of Ocean Energy Management Gulf of Mexico OCS Region OCS Study BOEM 2017-024 Deepwater Reconnaissance of Potentially Sensitive Biological Features Surrounding Shelf-Edge Topographical Banks in the Northern Gulf of Mexico Author Paul Sammarco Prepared under BOEM Contract M11AC00005 by Louisiana Universities Marine Consortium 8124 Highway 56 Baton Rouge, LA 70344-2110 Published by U.S. Department of the Interior New Orleans, LA Bureau of Ocean Energy Management February 2017 Gulf of Mexico OCS Region DISCLAIMER This report was prepared under contract between the Bureau of Ocean Energy Management (BOEM) and Louisiana Universities Marine Consortium (LUMCON). This report has been technically reviewed by BOEM, and it has been approved for publication. Approval does not necessarily signify that the contents reflect the views and policies of BOEM, nor does mention of trade names or commercial products constitute endorsement or recommendation for use. REPORT AVAILABILITY To download a PDF file of this Gulf of Mexico OCS Region report, go to the U.S. Department of the Interior, Bureau of Ocean Energy Management, Environmental Studies Program Information System website and search on OCS Study BOEM 2017-024. This report can be viewed at select Federal Depository Libraries. It can also be obtained from the National Technical Information Service; the contact information is below. U.S. Department of Commerce National Technical Information Service 5301 Shawnee Rd. Springfield, Virginia 22312 Phone: (703) 605-6000, 1(800)553-6847 Fax: (703) 605-6900 Website: http://www.ntis.gov/ CITATION Sammarco, Paul W. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Identification Guide to the Deep-Sea Cartilaginous Fishes Of
Identification guide to the deep–sea cartilaginous fishes of the Southeastern Atlantic Ocean FAO. 2015. Identification guide to the deep–sea cartilaginous fishes of the Southeastern Atlantic Ocean. FishFinder Programme, by Ebert, D.A. and Mostarda, E., Rome, Italy. Supervision: Merete Tandstad, Jessica Sanders (FAO, Rome) Technical editor: Edoardo Mostarda (FAO, Rome) Colour illustrations, cover and graphic design: Emanuela D’Antoni (FAO, Rome) This guide was prepared under the “FAO Deep–sea Fisheries Programme” thanks to a generous funding from the Government of Norway (Support to the implementation of the International Guidelines on the Management of Deep-Sea Fisheries in the High Seas project) for the purpose of assisting states, institutions, the fishing industry and RFMO/As in the implementation of FAO International Guidelines for the Management of Deep-sea Fisheries in the High Seas. It was developed in close collaboration with the FishFinder Programme of the Marine and Inland Fisheries Branch, Fisheries Department, Food and Agriculture Organization of the United Nations (FAO). The present guide covers the deep–sea Southeastern Atlantic Ocean and that portion of Southwestern Indian Ocean from 18°42’E to 30°00’E (FAO Fishing Area 47). It includes a selection of cartilaginous fish species of major, moderate and minor importance to fisheries as well as those of doubtful or potential use to fisheries. It also covers those little known species that may be of research, educational, and ecological importance. In this region, the deep–sea chondrichthyan fauna is currently represented by 50 shark, 20 batoid and 8 chimaera species. This guide includes full species accounts for 37 shark, 9 batoid and 4 chimaera species selected as being the more difficult to identify and/or commonly caught. -
Downloaded from the CCAMLR Website at the CCAMLR Scheme of International Scientific Observation Webpage (
Scheme of International Scientific Observation Scientific Observer’s Manual Finfish Fisheries Version 2020 Address 181 Macquarie Street, Hobart, Tasmania 7000, Australia Web www.ccamlr.org Telephone +61 3 6210 1110 Post PO Box 213, North Hobart, Tasmania 7002, Australia Email [email protected] Fax +61 3 6224 8744 This manual is produced in the official languages of the Commission (English, French, Russian and Spanish) and may be downloaded from the CCAMLR website at the CCAMLR Scheme of International Scientific Observation webpage (www.ccamlr.org/node/73033). Version Release date Observer forms covered Description 2011 01/12/2010 2011 – 2015 Longline Original 2011 – 2015 Finfish Trawl 2011 – 2015 Krill Trawl 2019 Draft 01/10/2018 2019 Longline Draft version presented at 2019 Finfish Trawl WG-FSA-18 for review by 2019 Krill Trawl Members 2020 For release: 2020 Longline Presented to WG-EMM-2019 for 01/09/2019 2019 Finfish Trawl endorsement 2 Table of Contents 1. Introduction 5 2. SISO observer roles and responsibilities 5 3. Definition of terms 6 4. CCAMLR regulations 7 5. General operational procedures 8 6. Units and formats 9 7. Standard measurements 9 7.1 Fish 9 7.2 Skates and rays 10 8. Weights 11 9. Sexing and maturity stages 11 9.1 Toothfish 11 9.2 Skates and rays 14 10. Otolith collection and storage 15 10.1 Removing otoliths 15 10.2 Otolith storage 18 11. Conversion factor tests – finfish fisheries 18 12. Target Species Identification Guide 19 12.1 Toothfish 19 12.2 Patagonian toothfish 19 12.3 Antarctic Toothfish 20 12.4 Toothfish species differences 20 12.5 Mackerel icefish 22 13.