Ecosystem Approaches for Fisheries Management, Part 3

Total Page:16

File Type:pdf, Size:1020Kb

Ecosystem Approaches for Fisheries Management, Part 3 Ecosystem Approaches for Fisheries Management 211 Alaska Sea Grant College Program • AK-SG-99-01, 1999 Ecosystem Impacts of the KwaZulu-Natal Reef Fishery, South Africa: An Exploratory Model M. Verónica Toral-Granda University of Cape Town, Percy FitzPatrick Institute of African Ornithology, Rondebosch, South Africa Coleen L. Moloney Marine and Coastal Management, Cape Town, South Africa Jean M. Harris KwaZulu-Natal Nature Conservation Service, Durban, South Africa Bruce Q. Mann Oceanographic Research Institute, Durban, South Africa Abstract The linefishery in the subtropical waters off KwaZulu-Natal, South Africa, targets a variety of species associated with rocky reefs at depths of up to 200 m. Populations of many of these reef fish are severely depressed by past and current fishing. Current management objectives aim to rebuild these stocks and to conserve the ecosystems, but means of implementing these objectives are unclear. This paper presents a mass-balance, ecosys- tem model of the KwaZulu-Natal reef ecosystem. It divides the reef com- munity into 18 groups, and quantifies biomass, production, and consumption for each group. Flows among groups are calculated using a diet composition matrix that changes according to the relative productiv- ity of food groups. Model results indicate that community biomass is domi- nated by suspension-feeders. Detritus is assumed to be an important source of food for consumers, but this needs to be substantiated. The biomass and production of selected groups were changed in a series of experi- ments to investigate the impacts of the fishery. The results were evalu- ated in terms of ecotrophic efficiencies, and sometimes were unexpected 212 Toral-Granda et al. — Ecosystem Impacts of a Reef Fishery because of factors such as redirected predation from previously abundant groups onto other prey groups. The model was sensitive to changes in biomass of the fish groups, including that of the group that was histori- cally dominant in the fishery. Given the large historical changes, the cur- rent reef ecosystems are probably markedly different from the pristine state. However, it is difficult to predict the likely impacts of past and fu- ture changes on single species. Future management should aim to main- tain unfished areas of representative reef, and future data collection should be directed at comparative studies of protected and unprotected reef com- munities, to complement the ongoing fisheries data. The model, despite its limitations, is guiding future research so that limited resources can be directed appropriately to achieve management goals. Introduction Off KwaZulu-Natal, South Africa, the continental shelf is narrow, reaching a maximum width of 45 km in the central area and narrowing to 3-11 km in the north and south (Garratt 1984; Fig. 1). Scattered rocky reefs occur along the shelf in depths of up to 200 m (Fig. 1). The shelf waters are warm (21-26ºC) and the rocky reef ecosystems support diverse, subtropical com- munities containing more than 1,000 fish species belonging to 150 fami- lies (van der Elst 1988). Many of the demersal reef fish species are targeted by a diffuse, mostly small-scale linefishery that operates in the coastal areas (Garratt 1986), and supports recreational, subsistence, and com- mercial sectors. The mean annual landings of the linefishery over the last decade have been approximately 1,270 t (Mann-Lang et al. 1997). Fishing effort by all sectors of the KwaZulu-Natal reef fishery increased dramatically from the turn of the century. In early years, the large en- demic reef species were important in the catches, including species such as seventy-four (Polysteganus undulosus), red steenbras (Petrus rupestris), and other sparids that together made up 60-80% of the total catch by weight. With the fishing down of these previously abundant species to very low levels, there have been marked shifts in the species composition of the catch (Garratt 1986, van der Elst 1988, van der Elst and Adkin 1988, van der Elst and de Freitas 1988, Mann-Lang et al. 1997). Small, less fa- vored species are now caught, particularly slinger (Chrysoblephus puniceus) and soldier (Cheimerius nufar). In addition, demersal migrants have be- come more important in the catches. Most of the species currently caught by the linefishery are now considered threatened or endangered. Management of the KwaZulu-Natal linefishery has been carried out primarily by means of species-specific restrictions, including bag limits, size limits, and closed seasons (Mann-Lang et al. 1997). However, in a multispecies, multi-user fishery of this sort, it is difficult to predict the effects of single-species measures on the dynamics of other species in the ecosystem. Furthermore, there are concerns about the impacts that the Ecosystem Approaches for Fisheries Management 213 Figure 1. The distribution of rocky reefs on the continental shelf off KwaZulu- Natal, South Africa. After Garratt (1984). 214 Toral-Granda et al. — Ecosystem Impacts of a Reef Fishery shifting species composition will have on other species and on the reef ecosystem as a whole. This paper attempts to understand the complex trophic relationships that occur in the rocky reef ecosystem. The limited available data from the region are synthesised in an ecosystem model, using a mass balance approach similar to that used in the Ecopath software (Christensen and Pauly 1992). The model is necessarily speculative and is used primarily as a tool to aid understanding about the possible past and future ecological effects of fishing on the rocky reef ecosystem. The model is also used to highlight gaps in knowledge. Despite its limitations, the model is useful in synthesising information, and it is being used to guide future research and management in the context of an ecosystem approach. Methods Ecosystem Model Structure The biological component of the rocky reef ecosystem is represented by 18 groups, aggregated on the basis of trophic function: 1 detrital, 2 pri- mary producer, 5 invertebrate, and 10 vertebrate groups (Fig. 2). Each group contains a large number of species. Detritus In deep reefs, light availability limits photosynthesis, and it is assumed that the energetic basis for the system production comes mainly from detritus. This includes material from the overlying water that has sunk through the water column, as well as imported material, much of which presumably derives from land via the many rivers in the region (Fig. 1). The detrital pool receives contributions from all dead organic material, and the excretions and egestions of all living components of the ecosys- tem. It consists of fecal material, dead plants and animals, exoskeleton molts, particulate organic matter, dissolved organic matter, and bacteria. Detritus is consumed by many of the groups in the model. Primary Producers Primary production is derived from two main sources: macroscopic algae and phytoplankton. Macroscopic algae are attached to the rocky substra- tum, and are grazed by vertebrates and invertebrates. Phytoplankton pro- vide food for some suspension-feeding, reef-dwelling organisms as well as for pelagic species that are migrant visitors to the reef system. Invertebrates All small, invertebrate heterotrophs suspended in the water column are represented by a single zooplankton category (which also contains fish lar- vae). This aggregation necessarily results in an over-simplification of the food web, because zooplankton communities typically contain herbivores Ecosystem Approaches for Fisheries Management 215 Figure 2. Diagrammatic representation of the major components of the KwaZulu- Natal rocky-reef ecosystem, and their relative positions in the water col- umn. Model groups can be further aggregated into the seven groups shown in the key. 216 Toral-Granda et al. — Ecosystem Impacts of a Reef Fishery and carnivores with a large range of sizes and life-styles. The remaining four invertebrate groups are all associated with the rocky reef, and are distinguished on the basis of their main feeding mode and diet: suspen- sion-feeders, deposit feeders, grazers, and carnivores. Vertebrates Of the 10 vertebrate groups, 8 consist of bony fish, 1 represents sharks, and 1 represents marine mammals and seabirds. The fish groups are sepa- rated using four linked criteria: (1) habitat (reef-dwelling species or pe- lagic “migrants”); (2) feeding mode and diet; (3) size; and (4) status in the fishery (whether the species are currently or were previously important in the catches). These criteria result in two pelagic groups (small and large pelagic fish) and six reef-dwelling groups: planktivores, herbivores (i.e., grazers), small carnivores, large carnivores (i.e., feeding mainly on inver- tebrates), and two groups of large piscivores (feeding mainly on fish), one containing species that are commonly caught at present and the other containing those species that were important historically but that are cur- rently scarce. Representative species are indicated for each of these groups (Fig. 2). Ecosystem Flows and Data Sources The mass balance for each component of the ecosystem is given by: Consumptioni = Productioni + Respirationi + Egestioni (1) Annual consumption (Q) and production (P) were derived from bio- mass (B) estimates using constant annual Q:B and P:B ratios: Consumption (gDW × m–2 × y–1)= Q:B (y–1) × Biomass (gDW × m–2) (2) Production (gDW × m–2 × y–1) = P:B (y–1) × Biomass (gDW × m–2) (3) Egestion (non-assimilated food) was assumed to represent 20% of con- sumption throughout, and respiration was calculated by difference from equation (1). All egested material was assumed to enter the detrital pool. The losses to consumers from each category i were calculated as: 18 Q =×∑ × Losses ofijB to consumers j DCij = (4) j 1 B j where DCi,j is the diet composition, expressed as the fraction by weight that food item i forms of consumer j ’s diet. Diet compositions are known for only a few of the species that make up the KwaZulu-Natal rocky reef community.
Recommended publications
  • Forecasting the Impacts of Silver and Bighead Carp on the Lake Erie Food Web
    Transactions of the American Fisheries Society ISSN: 0002-8487 (Print) 1548-8659 (Online) Journal homepage: http://www.tandfonline.com/loi/utaf20 Forecasting the Impacts of Silver and Bighead Carp on the Lake Erie Food Web Hongyan Zhang, Edward S. Rutherford, Doran M. Mason, Jason T. Breck, Marion E. Wittmann, Roger M. Cooke, David M. Lodge, John D. Rothlisberger, Xinhua Zhu & Timothy B. Johnson To cite this article: Hongyan Zhang, Edward S. Rutherford, Doran M. Mason, Jason T. Breck, Marion E. Wittmann, Roger M. Cooke, David M. Lodge, John D. Rothlisberger, Xinhua Zhu & Timothy B. Johnson (2016) Forecasting the Impacts of Silver and Bighead Carp on the Lake Erie Food Web, Transactions of the American Fisheries Society, 145:1, 136-162, DOI: 10.1080/00028487.2015.1069211 To link to this article: http://dx.doi.org/10.1080/00028487.2015.1069211 © 2016 The Author(s). Published with View supplementary material license by American Fisheries Society© Hongyan Zhang, Edward S. Rutherford, Doran M. Mason, Jason T. Breck, Marion E. Wittmann, Roger M. Cooke, David M. Lodge, Published online: 30 Dec 2015. Submit your article to this journal John D. Rothlisberger, Xinhua Zhu, Timothy B. Johnson Article views: 1095 View related articles View Crossmark data Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=utaf20 Download by: [University of Strathclyde] Date: 02 March 2016, At: 02:30 Transactions of the American Fisheries Society 145:136–162, 2016 Published with license by American Fisheries Society 2016 ISSN: 0002-8487 print / 1548-8659 online DOI: 10.1080/00028487.2015.1069211 ARTICLE Forecasting the Impacts of Silver and Bighead Carp on the Lake Erie Food Web Hongyan Zhang* Cooperative Institute for Limnology and Ecosystems Research, School of Natural Resources and Environment, University of Michigan, 4840 South State Road, Ann Arbor, Michigan 48108, USA Edward S.
    [Show full text]
  • Fisheries and Aquaculture
    Ministry of Agriculture, Livestock and Irrigation 7. GOVERNMENT OF THE REPUBLIC OF THE UNION OF MYANMAR Formulation and Operationalization of National Action Plan for Poverty Alleviation and Rural Development through Agriculture (NAPA) Working Paper - 4 FISHERIES AND AQUACULTURE Yangon, June 2016 5. MYANMAR: National Action Plan for Agriculture (NAPA) Working Paper 4: Fisheries and Aquaculture TABLE OF CONTENTS ACRONYMS 3 1. INTRODUCTION 4 2. BACKGROUND 5 2.1. Strategic value of the Myanmar fisheries industry 5 3. SPECIFIC AREAS/ASPECTS OF THEMATIC AREA UNDER REVIEW 7 3.1. Marine capture fisheries 7 3.2. Inland capture fisheries 17 3.3. Leasable fisheries 22 3.4 Aquaculture 30 4. DETAILED DISCUSSIONS ON EACH CULTURE SYSTEM 30 4.1. Freshwater aquaculture 30 4.2. Brackishwater aquaculture 36 4.3. Postharvest processing 38 5. INSTITUTIONAL ENVIRONMENT 42 5.1. Management institutions 42 5.2. Human resource development 42 5.3. Policy 42 6. KEY OPPORTUNITIES AND CONSTRAINTS TO SECTOR DEVELOPMENT 44 6.1. Marine fisheries 44 6.2. Inland fisheries 44 6.3. Leasable fisheries 45 6.4. Aquaculture 45 6.5. Departmental emphasis on management 47 6.6. Institutional fragmentation 48 6.7. Human resource development infrastructure is poor 49 6.8. Extension training 50 6.9. Fisheries academies 50 6.10. Academia 50 7. KEY OPPORTUNITIES FOR SECTOR DEVELOPMENT 52 i MYANMAR: National Action Plan for Agriculture (NAPA) Working Paper 4: Fisheries and Aquaculture 7.1. Empowerment of fishing communities in marine protected areas (mpas) 52 7.2. Reduction of postharvest spoilage 52 7.3. Expansion of pond culture 52 7.4.
    [Show full text]
  • Pathogen Susceptibility of Silver Carp (Hypophthalmichthys Molitrix) and Bighead Carp (Hypophthalmichthys Nobilis) in the Wabash River Watershed
    Pathogen Susceptibility of Silver Carp (Hypophthalmichthys molitrix) and Bighead Carp (Hypophthalmichthys nobilis) in the Wabash River Watershed FINAL REPORT Kensey Thurner PhD Student Maria S Sepúlveda, Reuben Goforth, Cecon Mahapatra Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN 47907 Jon Amberg, US Geological Service, Upper Midwest Environmental Sciences Center, La Crosse, WI 54603 Eric Leis, US Fish and Widlife Service, La Crosse Fish Health Center, Onalaska, WI 54650 9/22/2014 Silver Carp (top) and Bighead Carp (bottom) caught in the Tippecanoe River, Photos by Alison Coulter Final Report 9/22/2014 - Page 2 Executive Summary The Pathogen Susceptibility of Silver Carp (Hypophthalmichthys molitrix) and Bighead Carp (Hypophthalmichthys nobilis) in the Wabash River Watershed project was undertaken to address the lack of available information regarding pathogens in the highly invasive Silver and Bighead Carps, collectively known as bigheaded carps. Very little is known about the prevalence and effects of parasites, bacteria and viruses on the health of invasive bigheaded carp populations in the United States or the effects of bigheaded carps on the disease risk profile for sympatric, native fish of the U.S. The main objectives of this project were to conduct a systematic survey of parasites, bacteria and viruses of Asian carps and a representative number of native Indiana fish species in the upper and middle Wabash and the lower Tippecanoe Rivers, Indiana; to determine the susceptibility of Asian carps to a representative number of natural pathogens using in vitro approaches; and to involve anglers in the development of a cost effective state-wide surveillance program for documentation of viral diseases of fish.
    [Show full text]
  • Hypophthalmichthys Molitrix and H. Nobilis)
    carpsAB_covers 6/30/15 9:33 AM Page 1 BIGHEADED CARPS (Hypophthalmichthys molitrix and H. nobilis) An Annotated Bibliography on Literature Composed from 1970 to 2014 Extension Service Forest and Wildlife Research Center The information given here is for educational purposes only. References to commercial products, trade names, or suppliers are made with the understanding that no endorsement is implied and that no discrimination against other products or suppliers is intended. Copyright 2015 by Mississippi State University. All rights reserved. This publication may be copied and distributed without alteration for nonprofit educational purposes provided that credit is given to the Mississippi State University Extension Service. By Andrew Smith, Extension Associate Biologist, MSU Center for Resolving Human-Wildlife Conflicts. We are an equal opportunity employer, and all qualified applicants will receive consideration for employment without regard to race, color, religion, sex, Compiled by Andrew L. Smith national origin, disability status, protected veteran status, or any other characteristic protected by law. Edited by Steve Miranda, PhD, and Wes Neal, PhD Publication 2890 Extension Service of Mississippi State University, cooperating with U.S. Department of Agriculture. Published in furtherance of Acts of Congress, May 8 and June 30, 1914. GARY B. JACKSON, Director (500-06-15) carpsAB_covers 6/30/15 9:33 AM Page 3 Bigheaded Carps (Hypophthalmichthys molitrix and H. nobilis): An Annotated Bibliography on Literature Composed from 1970 to 2014 Compiled by Andrew L. Smith Mississippi State University Extension Service Center for Resolving Human-Wildlife Conflicts Department of Wildlife, Fisheries, and Aquaculture Forest and Wildlife Research Center Edited by Steve Miranda, PhD Wes Neal, PhD Andrew L.
    [Show full text]
  • INVERTEBRATE SPECIES in the EASTERN BERING SEA By
    Effects of areas closed to bottom trawling on fish and invertebrate species in the eastern Bering Sea Item Type Thesis Authors Frazier, Christine Ann Download date 01/10/2021 18:30:05 Link to Item http://hdl.handle.net/11122/5018 e f f e c t s o f a r e a s c l o s e d t o b o t t o m t r a w l in g o n fish a n d INVERTEBRATE SPECIES IN THE EASTERN BERING SEA By Christine Ann Frazier RECOMMENDED: — . /Vj Advisory Committee Chair Program Head / \ \ APPROVED: M--- —— [)\ Dean, School of Fisheries and Ocean Sciences • ~7/ . <-/ / f a Dean of the Graduate Sch6oI EFFECTS OF AREAS CLOSED TO BOTTOM TRAWLING ON FISH AND INVERTEBRATE SPECIES IN THE EASTERN BERING SEA A THESIS Presented to the Faculty of the University of Alaska Fairbanks in Partial Fulfillment of the Requirements for the Degree of MASTER OF SCIENCE 6 By Christine Ann Frazier, B.A. Fairbanks, Alaska December 2003 UNIVERSITY OF ALASKA FAIRBANKS ABSTRACT The Bering Sea is a productive ecosystem with some of the most important fisheries in the United States. Constant commercial fishing for groundfish has occurred since the 1960s. The implementation of areas closed to bottom trawling to protect critical habitat for fish or crabs resulted in successful management of these fisheries. The efficacy of these closures on non-target species is unknown. This study determined if differences in abundance, biomass, diversity and evenness of dominant fish and invertebrate species occur among areas open and closed to bottom trawling in the eastern Bering Sea between 1996 and 2000.
    [Show full text]
  • 2021 Louisiana Recreational Fishing Regulations
    2021 LOUISIANA RECREATIONAL FISHING REGULATIONS www.wlf.louisiana.gov 1 Get a GEICO quote for your boat and, in just 15 minutes, you’ll know how much you could be saving. If you like what you hear, you can buy your policy right on the spot. Then let us do the rest while you enjoy your free time with peace of mind. geico.com/boat | 1-800-865-4846 Some discounts, coverages, payment plans, and features are not available in all states, in all GEICO companies, or in all situations. Boat and PWC coverages are underwritten by GEICO Marine Insurance Company. In the state of CA, program provided through Boat Association Insurance Services, license #0H87086. GEICO is a registered service mark of Government Employees Insurance Company, Washington, DC 20076; a Berkshire Hathaway Inc. subsidiary. © 2020 GEICO CONTENTS 6. LICENSING 9. DEFINITIONS DON’T 11. GENERAL FISHING INFORMATION General Regulations.............................................11 Saltwater/Freshwater Line...................................12 LITTER 13. FRESHWATER FISHING SPORTSMEN ARE REMINDED TO: General Information.............................................13 • Clean out truck beds and refrain from throwing Freshwater State Creel & Size Limits....................16 cigarette butts or other trash out of the car or watercraft. 18. SALTWATER FISHING • Carry a trash bag in your car or boat. General Information.............................................18 • Securely cover trash containers to prevent Saltwater State Creel & Size Limits.......................21 animals from spreading litter. 26. OTHER RECREATIONAL ACTIVITIES Call the state’s “Litterbug Hotline” to report any Recreational Shrimping........................................26 potential littering violations including dumpsites Recreational Oystering.........................................27 and littering in public. Those convicted of littering Recreational Crabbing..........................................28 Recreational Crawfishing......................................29 face hefty fines and litter abatement work.
    [Show full text]
  • Missouri River FWCO Bismarck, ND February, 2020 MONTHLY ACTIVITIES
    Missouri River FWCO Bismarck, ND February, 2020 MONTHLY ACTIVITIES Pallid Sturgeon Population Assessment Program summary Ryan continued entering over a 1,000 pallid sturgeon catch records from across the range into the National Pallid Sturgeon Database. This included incorporating genetic, steroid hormone, and ultrasound results as well as additional tag information such as implantation of telemetry tags. Produced a presentation for the Upper Basin Pallid Sturgeon Workgroup outlining our 2019 field activities. This included comparing the changes in the PSPAP sample design that were implemented in 2019 to the previous sample design that began in 2005. Native Species Restoration Discussions were held to review the needs of the pallid sturgeon data management to assist with recovery and monitoring efforts. This effort would link several data sources to build a complete network for researchers and enhance management decisions. Sikes Act Work continued on the Minot Air Force Base mammalian inventory. Species previously documented on Base that were observed in January include white tailed deer, raccoons, a domestic cat, coyotes, ringed neck pheasants, tree squirrels, and white tailed jack rabbits. New this month was a short-tailed/least weasel, as seen in the second picture below. Aquatic Invasive Species An Invasive Carp strategy was developed for the ARD meeting and the Missouri River Asian Carp Technical Committee met to share information prior to the MRNRC subcommittee meeting in June. A cooperate bighead and silver carp mapping effort within the Missouri River Watershed began between the Missouri River and Columbia FWCOs. The goal of the mapping effort is to identify stream reaches that have been documented with bighead and silver carp, along with fish passage barriers upstream of those locations.
    [Show full text]
  • Leaping Behavior in Silver Carp (Hypophthalmichthys Molitrix): Analysis of Burst Swimming Speeds, Angle of Escape, Height, and Distance of Leaps
    CORE Metadata, citation and similar papers at core.ac.uk Provided by eGrove (Univ. of Mississippi) University of Mississippi eGrove Electronic Theses and Dissertations Graduate School 2018 Leaping Behavior In Silver Carp (Hypophthalmichthys Molitrix): Analysis Of Burst Swimming Speeds, Angle Of Escape, Height, And Distance Of Leaps Ehlana Stell University of Mississippi Follow this and additional works at: https://egrove.olemiss.edu/etd Part of the Biology Commons Recommended Citation Stell, Ehlana, "Leaping Behavior In Silver Carp (Hypophthalmichthys Molitrix): Analysis Of Burst Swimming Speeds, Angle Of Escape, Height, And Distance Of Leaps" (2018). Electronic Theses and Dissertations. 374. https://egrove.olemiss.edu/etd/374 This Dissertation is brought to you for free and open access by the Graduate School at eGrove. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of eGrove. For more information, please contact [email protected]. LEAPING BEHAVIOR IN SILVER CARP (HYPOPHTHALMICHTHYS MOLITRIX): ANALYSIS OF BURST SWIMMING SPEEDS, ANGLE OF ESCAPE, HEIGHT, AND DISTANCE OF LEAPS A Thesis presented in partial fulfillment of requirements for the degree of Master of Science in the Department of Biology The University of Mississippi By EHLANA G. STELL May 2018 Copyright Ehlana G. Stell ALL RIGHTS RESERVED ABSTRACT Silver Carp have rapidly expanded their range exploiting vulnerable habitats, disrupting fisheries, and inflicting unknown ecological damage. These fish have continued to spread into the Middle Mississippi River and the Tennessee River Valley and great effort is being expended to prevent Silver Carp from entering the Great Lakes and expanding further into the Ohio, Illinois, Missouri, and Tennessee Rivers.
    [Show full text]
  • Biodiversity of Arctic Marine Fishes: Taxonomy and Zoogeography
    Mar Biodiv DOI 10.1007/s12526-010-0070-z ARCTIC OCEAN DIVERSITY SYNTHESIS Biodiversity of arctic marine fishes: taxonomy and zoogeography Catherine W. Mecklenburg & Peter Rask Møller & Dirk Steinke Received: 3 June 2010 /Revised: 23 September 2010 /Accepted: 1 November 2010 # Senckenberg, Gesellschaft für Naturforschung and Springer 2010 Abstract Taxonomic and distributional information on each Six families in Cottoidei with 72 species and five in fish species found in arctic marine waters is reviewed, and a Zoarcoidei with 55 species account for more than half list of families and species with commentary on distributional (52.5%) the species. This study produced CO1 sequences for records is presented. The list incorporates results from 106 of the 242 species. Sequence variability in the barcode examination of museum collections of arctic marine fishes region permits discrimination of all species. The average dating back to the 1830s. It also incorporates results from sequence variation within species was 0.3% (range 0–3.5%), DNA barcoding, used to complement morphological charac- while the average genetic distance between congeners was ters in evaluating problematic taxa and to assist in identifica- 4.7% (range 3.7–13.3%). The CO1 sequences support tion of specimens collected in recent expeditions. Barcoding taxonomic separation of some species, such as Osmerus results are depicted in a neighbor-joining tree of 880 CO1 dentex and O. mordax and Liparis bathyarcticus and L. (cytochrome c oxidase 1 gene) sequences distributed among gibbus; and synonymy of others, like Myoxocephalus 165 species from the arctic region and adjacent waters, and verrucosus in M. scorpius and Gymnelus knipowitschi in discussed in the family reviews.
    [Show full text]
  • Cottoidei: Cottidae) Necessitates Generic Realignment
    G C A T T A C G G C A T genes Article Genetic Evidence for a Mixed Composition of the Genus Myoxocephalus (Cottoidei: Cottidae) Necessitates Generic Realignment Evgeniy S. Balakirev 1,2,*, Alexandra Yu. Kravchenko 1,3 and Alexander A. Semenchenko 3 1 A.V. Zhirmunsky National Scientific Center of Marine Biology, Far Eastern Branch, Russian Academy of Sciences, Vladivostok 690041, Russia; [email protected] 2 School of Biomedicine, Far Eastern Federal University, Vladivostok 690950, Russia 3 Laboratory of Ecology and Evolutionary Biology of Aquatic Organisms, School of Natural Sciences, Far Eastern Federal University, Vladivostok 690950, Russia; [email protected] * Correspondence: [email protected] Received: 7 July 2020; Accepted: 9 September 2020; Published: 11 September 2020 Abstract: Sculpin fishes belonging to the family Cottidae represent a large and complex group, inhabiting a wide range of freshwater, brackish-water, and marine environments. Numerous studies based on analysis of their morphology and genetic makeup frequently provided controversial results. In the present work, we sequenced complete mitochondrial (mt) genomes and fragments of nuclear ribosomal DNA (rDNA) of the fourhorn sculpin Myoxocephalus quadricornis and some related cottids to increase the power of phylogenetic and taxonomic analyses of this complex fish group. A comparison of the My. quadricornis mt genomes obtained by us with other complete mt genomes available in GenBank has revealed a surprisingly low divergence (3.06 0.12%) with Megalocottus platycephalus ± and, at the same time, a significantly higher divergence (7.89 0.16%) with the species of the genus ± Myoxocephalus. Correspondingly, phylogenetic analyses have shown that My. quadricornis is clustered with Me.
    [Show full text]
  • Conclusions GRS 1 3 5 6 8 9 10 12 16 18 20 21 31 35 36 38 40 42 45 GREENLAND SEA
    a a b c d e a) b) c) d) e) Lynghammar University of Tromsø, Norway, A., Christiansen University of Washington,, J. USAS., Gallucci Murmansk Marine, V. BiologicalF., Karamushko Institute, Russia California, O. V., AcademyMecklenburg of Sciences, USA, C. Natural W. History& Møller Museum ,of P. Denmark R. Contact: [email protected] introduction The sea ice cover decreases and human activity increases in Arctic waters. Fisheries (by-catch issues), shipping and petroleum exploita- tion (pollution issues) make it imperative to establish biological base- OCCURRENCE OF lines for the marine fishes inhabiting the Arctic Ocean and adjacent seas (AOAS). As a first step towards credible conservation actions for the Arctic marine fish faunae, we examine the species-richness of chondrich- thyan fishes (class Chondrichthyes) pertaining to 16 regions within the AOAS: chimaeras, sharks and skates. CHONDRICHTHYAN materials and methods • Voucher specimens from Natural History Collections IN THE ARCTIC OCEAN • Annotated checklists (see selected references) • The CAFF Database on Arctic marine fishes (Christiansen et al., in AND ADJACENT SEAS progress) FISHES Only presence and absence data are considered, as reliable abundance data lack for most species. Occurrences known only from floating or beach-cast carcasses, such as Pacific sleeper shark (no. 17) and Alaska skate (no. 29) in the Chukchi Sea, are not considered conclusive evidence of presence and are not included. CHIMAERIFORMES HEXANCHIFORMES RAJIFORMES Chimaeridae - ratfishes Chlamydoselachidae
    [Show full text]
  • Amblyraja, Bathyrajaandraja: Rajidae
    Journal of Fish Biology (2006) 69 (Supplement B), 283–292 #doi:10.1111/j.1095-8649.2006.01286.x, available online at http://www.blackwell-synergy.com DNA-based identification of Alaska skates (Amblyraja, Bathyraja and Raja: Rajidae) using cytochrome c oxidase subunit I (coI) variation I. B. SPIES,S.GAICHAS,D.E.STEVENSON,J.W.ORR AND M. F. CANINO* NOAA, National Marine Fisheries Service, Alaska Fisheries Science Center, 7600 Sand Point Way NE, Seattle, WA 98115, U.S.A. (Received 13 February 2006, Accepted 4 August 2006) Variation at the mitochondrial cytochrome c oxidase subunit I (mt-COI) gene was examined in 15 species of North Pacific skates. Thirteen species had unique sequences, indicating that a DNA-based barcoding approach may be useful for species identification. Journal compilation # 2006 The Fisheries Society of the British Isles No claim to original US government works Key words: coI; cytochrome c oxidase subunit I; DNA barcode; mitochondrial DNA; species identification; skates. The skates of the North Pacific Ocean and Bering Sea (family Rajidae) are represented by a complex of 15 species in three genera, Raja L., Amblyraja Malm, 1877 and Bathyraja Ishiyama, 1958 (Mecklenburg et al., 2002; Stevenson et al., 2004; Stevenson & Orr, 2005). The genus Raja, known as ‘stiff-snout’ skates due to a robust rostral cartilage, is represented by two spe- cies (Raja rhina Jordan and Gilbert, 1880 and Raja binoculata Girard, 1855). Twelve species are presently recognized in Bathyraja, the genus of ‘soft-snout’ skates possessing a flexible rostral cartilage (Table I). A third genus repre- sented by the deepwater species Amblyraja badia (Garman, 1899) was recently discovered in Alaska (Stevenson & Orr, 2005).
    [Show full text]