Marine Algal Endophyte and Epiphytes New to New Caledonia
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Supplementary Materials: Figure S1
1 Supplementary materials: Figure S1. Coral reef in Xiaodong Hai locality: (A) The southern part of the locality; (B) Reef slope; (C) Reef-flat, the upper subtidal zone; (D) Reef-flat, the lower intertidal zone. Figure S2. Algal communities in Xiaodong Hai at different seasons of 2016–2019: (A) Community of colonial blue-green algae, transect 1, the splash zone, the dry season of 2019; (B) Monodominant community of the red crust alga Hildenbrandia rubra, transect 3, upper intertidal, the rainy season of 2016; (C) Monodominant community of the red alga Gelidiella bornetii, transect 3, upper intertidal, the rainy season of 2018; (D) Bidominant community of the red alga Laurencia decumbens and the green Ulva clathrata, transect 3, middle intertidal, the dry season of 2019; (E) Polydominant community of algal turf with the mosaic dominance of red algae Tolypiocladia glomerulata (inset a), Palisada papillosa (center), and Centroceras clavulatum (inset b), transect 2, middle intertidal, the dry season of 2019; (F) Polydominant community of algal turf with the mosaic dominance of the red alga Hypnea pannosa and green Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2016; (G) Polydominant community of algal turf with the mosaic dominance of brown algae Padina australis (inset a) and Hydroclathrus clathratus (inset b), the red alga Acanthophora spicifera (inset c) and the green alga Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2019; (H) Sargassum spp. belt, transect 1, upper subtidal, the dry season of 2016. 2 3 Table S1. List of the seaweeds of Xiaodong Hai in 2016-2019. The abundance of taxa: rare sightings (+); common (++); abundant (+++). -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
bioRxiv preprint doi: https://doi.org/10.1101/668475; this version posted June 12, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, Pavel Škaloudf, Charles F. Delwicheg, Andrew H. Knollh, John A. Raveni,j,k, Heroen Verbruggene, Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2 Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, Krijgslaan 281, 9000 Ghent, Belgium bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium cVIB Center for Plant Systems Biology, Technologiepark 71, 9052 Zwijnaarde, Belgium dBioinformatics Institute Ghent, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium eSchool of Biosciences, University of Melbourne, Melbourne, Victoria, Australia fDepartment of Botany, Faculty of Science, Charles University, Benátská 2, CZ-12800 Prague 2, Czech Republic gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, 02138, USA. iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee, DD2 5DA, UK jSchool of Biological Sciences, University of Western Australia (M048), 35 Stirling Highway, WA 6009, Australia kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia lMeise Botanic Garden, Nieuwelaan 38, 1860 Meise, Belgium 1To whom correspondence may be addressed. Email [email protected], [email protected], [email protected] or [email protected]. -
An Annotated List of Marine Chlorophyta from the Pacific Coast of the Republic of Panama with a Comparison to Caribbean Panama Species
Nova Hedwigia 78 1•2 209•241 Stuttgart, February 2004 An annotated list of marine Chlorophyta from the Pacific Coast of the Republic of Panama with a comparison to Caribbean Panama species by Brian Wysor The University of Louisiana at Lafayette, Department of Biology PO Box 42451, Lafayette, LA 70504-2451, USA. Present address: Bigelow Laboratory for Ocean Sciences PO Box 475, McKown Point, West Boothbay Harbor, ME 04575, USA. With 21 figures, 3 tables and 1 appendix Wysor, B. (2004): An annotated list of marine Chlorophytafrom the Pacific Coast of the Republic of Panama with a comparison to Caribbean Panama species. - Nova Hedwigia 78: 209-241. Abstract: Recent study of marine macroalgal diversity of the Republic of Panama has led to a substantial increase in the number of seaweed species documented for the country. In this updated list of marine algae based on collections made in 1999 and reports from the literature, 44 Chlorophyta (43 species and one variety) are documented for the Pacific coast of Panama, including 27 new records. A comparison of chlorophyte diversity along Caribbean and Pacific coasts revealed greater diversity at nearly all taxonomic levels in the Caribbean flora. Differences in environmentalregime (e.g., absence of sea grasses, lower abundance and diversity of hermatypic corals, and greater tidal range along the Pacific coast) explained some of the discrepancy in diversity across the isthmus. Fifteen taxa were common to Caribbean and Pacific coasts, but the number of amphi-isthmian taxa nearly doubled when taxa from nearby floras were includedin the estimate. These taxa may represent daughter populations of a formerly contiguouspopulation that was severed by the emerging Central American Isthmus. -
Article ISSN 1179-3163 (Online Edition)
Phytotaxa 260 (1): 075–082 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2016 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.260.1.8 Phylogenetic Position and Morphological Observation of the Ctenocladus circinnatus Borzi, a rare green alga from Changtang Plateau, China BENWEN LIU1, 2, XUDONG LIU1, 2, ZHENGYU HU3, HUAN ZHU1 & GUOXIANG LIU1* 1Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, People’s Republic of China 2University of Chinese Academy of Sciences, Beijing 100039, People’s Republic of China 3State key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, People’s Republic of China * Corresponding author ([email protected]) Abstract Two microfilamentous green algal specimens from Tibet were identified as Ctenocladus circinnatus Borzi, due to their unique morphology and saline habitat. The phylogenetic evidence based on DNA sequence data from the nucleus (SSU) and chloroplast elongation factor TU (tufA) sequences clearly revealed that the genus Ctenocladus, which has been classified in the Chaetophorales (Chlorophyceae) or Trebouxiophyceae incertae sedis by most phycologists, should be included in the Ulvales (Ulvophyceae) instead, and has a close relationship with the genera Pseudendoclonium and Phaeophila. We specu- late that there may be undescribed or cryptic species especially in freshwater and other non-marine habitats. A phylogenetic re-evaluation based on large samples of microfilamentous ulvophycean algae especially freshwater specimens is needed. Keywords: Ctenocladus circinnatus, Changtang Plateau, Phaeophila, Pseudendoclonium, Ulvophyceae Introduction The relatively rare green algae Ctenocladus was first described in Italy (Borzi 1883). -
7 Systematics of the Green Algae
7989_C007.fm Page 123 Monday, June 25, 2007 8:57 PM Systematics of the green 7 algae: conflict of classic and modern approaches Thomas Pröschold and Frederik Leliaert CONTENTS Introduction ....................................................................................................................................124 How are green algae classified? ........................................................................................125 The morphological concept ...............................................................................................125 The ultrastructural concept ................................................................................................125 The molecular concept (phylogenetic concept).................................................................131 Classic versus modern approaches: problems with identification of species and genera.....................................................................................................................134 Taxonomic revision of genera and species using polyphasic approaches....................................139 Polyphasic approaches used for characterization of the genera Oogamochlamys and Lobochlamys....................................................................................140 Delimiting phylogenetic species by a multi-gene approach in Micromonas and Halimeda .....................................................................................................................143 Conclusions ....................................................................................................................................144 -
Analysis of a Plastid Multigene Data Set and the Phylogenetic Position of the Marine Macroalga Caulerpa Filiformis (Chlorophyta)1
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Ghent University Academic Bibliography J. Phycol. 45, 1206–1212 (2009) Ó 2009 Phycological Society of America DOI: 10.1111/j.1529-8817.2009.00731.x ANALYSIS OF A PLASTID MULTIGENE DATA SET AND THE PHYLOGENETIC POSITION OF THE MARINE MACROALGA CAULERPA FILIFORMIS (CHLOROPHYTA)1 G. C. Zuccarello2, Natalie Price School of Biological Sciences, Victoria University of Wellington, P.O. Box 600, Wellington, New Zealand Heroen Verbruggen and Frederik Leliaert Phycology Research Group and Center for Molecular Phylogenetics and Evolution, Ghent University, Krijgslaan 281 (S8), B-9000 Gent, Belgium Molecular phylogenetic relationships within the Lewis and McCourt 2004, Pro¨schold and Leliaert Chlorophyta have relied heavily on rRNA data. 2007). These data have revolutionized our insight in green With molecular and ultrastructural data certain algal evolution, yet some class relationships have evolutionary trends are clear. The Viridiplantae are never been well resolved. A commonly used class divided into two distinct lineages, the Streptophyta within the Chlorophyta is the Ulvophyceae, although and the Chlorophyta (Bremer 1985). The Strepto- there is not much support for its monophyly. The phyta includes the land plants and their sister clades, relationships among the Ulvophyceae, Trebouxio- a paraphyletic assemblage of green algae (known as phyceae, and Chlorophyceae are also contentious. charophyte green algae). The Chlorophyta includes In recent years, chloroplast genome data have the remaining green algae belonging to four classes. shown their utility in resolving relationships between The Prasinophyceae are the earliest diverging Chlo- the main green algal clades, but such studies have rophyta and form a paraphyletic assemblage at the never included marine macroalgae. -
A Chronology of Middle Missouri Plains Village Sites
Smithsonian Institution Scholarly Press smithsonian contributions to botany • number 106 Smithsonian Institution Scholarly Press ConspectusA Chronology of the Benthic of MiddleMarine AlgaeMissouri of the Plains Gulf of California:Village Rhodophyta, Sites Phaeophyceae, and ChlorophytaBy Craig M. Johnson with contributions by StanleyJames A. N. Ahler, Norris, Herbert Luis Haas, E. and Aguilar-Rosas, Georges Bonani and Francisco F. Pedroche SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of “diffusing knowledge” was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: “It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge.” This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Botany Smithsonian Contributions to History and Technology Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Museum Conservation Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology In these series, the Smithsonian Institution Scholarly Press (SISP) publishes small papers and -
Toward a Monograph of Non-Marine Ulvophyceae Using an Integrative Approach (Molecular Phylogeny and Systematics of Terrestrial Ulvophyceae II.)
Phytotaxa 324 (1): 001–041 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2017 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.324.1.1 Toward a monograph of non-marine Ulvophyceae using an integrative approach (Molecular phylogeny and systematics of terrestrial Ulvophyceae II.) TATYANA DARIENKO1 & THOMAS PRÖSCHOLD2 1 University of Göttingen, Experimental Phycology and Culture Collection of Algae, Nikolausberger Weg 18, D-37073 Göttingen, Ger- many, and Kholodny Institute of Botany, National Academy of Science, Tereschenkivska Str. 2, Kyiv 01601, Ukraine 2 University of Innsbruck, Research Institute for Limnology, Mondseestr. 9, A-5310 Mondsee, Austria Corresponding author: Thomas Pröschold, E-mail: [email protected] Abstract Phylogenetic analyses of SSU rDNA sequences have shown that coccoid and filamentous green algae are distributed among all classes of the Chlorophyta. One of these classes, the Ulvophyceae, mostly contains marine seaweeds and microalgae. However, new studies have shown that there are filamentous and sarcinoid freshwater and terrestrial spe- cies (including symbionts in lichens) among the Ulvophyceae, but very little is known about these species. Ultrastruc- tural studies of some of them have confirmed that the flagellar apparatus of zoospores (counterclockwise basal body orientation) is typical for the Ulvophyceae. In addition to ultrastructural features, the presence of a “Codiolum”-stage is characteristic of some members of this algal class. We studied more than 50 strains of freshwater and terrestrial ulvophycean microalgae obtained from the different public culture collection and our own isolates using an integra- tive approach. Three independent lineages of the Ulvophyceae containing terrestrial species were revealed by these methods. -
Constancea 83.8: Checklist of the Benthic Marine Algae Known to Puerto Rico
Constancea 83.8: Checklist of the Benthic Marine Algae Known to Puerto Rico Constancea 83, 2002 University and Jepson Herbaria P.C. Silva Festschrift A Checklist of the Benthic Marine Algae Known to Puerto Rico, Second Revision David L. Ballantine and Nilda E. Aponte Department of Marine Sciences University of Puerto Rico Mayagüez, Puerto Rico U.S.A. 00681 http://ucjeps.berkeley.edu/constancea/83/ballantine_aponte/checklist.html (1 of 3)9/14/2006 6:10:37 AM Constancea 83.8: Checklist of the Benthic Marine Algae Known to Puerto Rico Bonnie Bower Dennis The Checklist: ● Rhodophyta ● Heterokontophyta ● Chlorophyta ● Bibliography ● Notes This checklist is originally based on: Ballantine, D.L. and N.E. Aponte. 1997. A revised checklist of the benthic marine algae known to Puerto Rico. Caribbean Journal of Science, 33: 150–179. The first complete list of the marine benthic algal flora of Puerto Rico was compiled by Almodóvar and Ballantine (1983). That list was revised by Ballantine and Aponte (1997a). Numerous nomenclatural changes were incorporated. The present revision includes newly reported species records for Puerto Rico as well as systematic updates reported by Wynne (1998). Four hundred ninety-two species of algae, including macroscopic Chrysophyceae and Xanthophyceae but excluding Cyanophyta, are now listed from Puerto Rico. Among the major divisions of algae, the flora consists of 59% Rhodophyta, 13% Phaeophyta, and 28% Chlorophyta. Puerto Rico is centrally situated in an arc of islands comprising the West Indies. The Greater Antilles, of which Puerto Rico is the eastern-most island, define the northern boundary of the Caribbean Sea; thus, the north coast of Puerto Rico abuts the Atlantic Ocean while the remaining coasts are technically Caribbean. -
Phylogeny and Molecular Evolution of the Green Algae
Phylogeny and molecular evolution of the green algae Frédérik Leliaert, David Smith, Hervé Moreau, Matthew Herron, Heroen Verbruggen, Charles Delwiche, Olivier de Clerck To cite this version: Frédérik Leliaert, David Smith, Hervé Moreau, Matthew Herron, Heroen Verbruggen, et al.. Phylogeny and molecular evolution of the green algae. Critical Reviews in Plant Sciences, 2012, 31 (1), pp.1-46. 10.1080/07352689.2011.615705. hal-01590252 HAL Id: hal-01590252 https://hal.archives-ouvertes.fr/hal-01590252 Submitted on 19 Sep 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. postprint Leliaert, F., Smith, D.R., Moreau, H., Herron, M.D., Verbruggen, H., Delwiche, C.F., De Clerck, O., 2012. Phylogeny and molecular evolution of the green algae. Critical Reviews in Plant Sciences 31: 1-46. doi:10.1080/07352689.2011.615705 Phylogeny and Molecular Evolution of the Green Algae Frederik Leliaert1, David R. Smith2, Hervé Moreau3, Matthew Herron4, Heroen Verbruggen1, Charles F. Delwiche5, Olivier De Clerck1 1 Phycology Research Group, Biology Department, Ghent -
Ulvella Tongshanensis (Ulvellaceae, Chlorophyta), a New Freshwater Species from China, and an Emended Morphological Circumscription of the Genus Ulvella
Fottea, Olomouc, 15(1): 95–104, 2015 95 DOI: 10.5507/fot.2015.008 Ulvella tongshanensis (Ulvellaceae, Chlorophyta), a new freshwater species from China, and an emended morphological circumscription of the genus Ulvella Huan ZHU1, 2, Frederik LELIAERT3, Zhi–Juan ZHAO1, 2, Shuang XIA4, Zheng–Yu HU5, Guo–Xiang LIU1* 1 Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China; *Corresponding author e–mail: [email protected] 2University of Chinese Academy of Sciences, Beijing 100049, P. R. China 3Marine Biology Research Group, Department of Biology, Ghent University, Krijgslaan 281–S8, 9000 Ghent, Belgium 4College of Life Sciences, South–central University for Nationalities, Wuhan, 430074, P. R. China 5State key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China Abstract: A new freshwater species of Ulvella, U. tongshanensis H. ZHU et G. LIU, is described from material collected from rocks under small waterfalls in Hubei Province, China. This unusual species differs from other species in the genus by the macroscopic and upright parenchymatous thalli, and by the particular habitat (most Ulvella species occur in marine environments). Phylogenetic analyses of plastid encoded rbcL and tufA, and nuclear 18S rDNA sequences, pointed towards the generic placement of U. tongshanensis and also showed a close relationship with two other freshwater species, Ulvella bullata (Jao) H. ZHU et G. LIU, comb. nov. and Ulvella prasina (Jao) H. ZHU et G. LIU, comb. nov. The latter two were previously placed in the genus Jaoa and are characterized by disc–shaped to vesicular morphology.