Pseudomonas Syringae Pv. Tomato: the Right Pathogen, of the Right Plant, at the Right Time
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Response of Heterotrophic Stream Biofilm Communities to a Gradient of Resources
The following supplement accompanies the article Response of heterotrophic stream biofilm communities to a gradient of resources D. J. Van Horn1,*, R. L. Sinsabaugh1, C. D. Takacs-Vesbach1, K. R. Mitchell1,2, C. N. Dahm1 1Department of Biology, University of New Mexico, Albuquerque, New Mexico 87131, USA 2Present address: Department of Microbiology & Immunology, University of British Columbia Life Sciences Centre, Vancouver BC V6T 1Z3, Canada *Email: [email protected] Aquatic Microbial Ecology 64:149–161 (2011) Table S1. Representative sequences for each OTU, associated GenBank accession numbers, and taxonomic classifications with bootstrap values (in parentheses), generated in mothur using 14956 reference sequences from the SILVA data base Treatment Accession Sequence name SILVA taxonomy classification number Control JF695047 BF8FCONT18Fa04.b1 Bacteria(100);Proteobacteria(100);Gammaproteobacteria(100);Pseudomonadales(100);Pseudomonadaceae(100);Cellvibrio(100);unclassified; Control JF695049 BF8FCONT18Fa12.b1 Bacteria(100);Proteobacteria(100);Alphaproteobacteria(100);Rhizobiales(100);Methylocystaceae(100);uncultured(100);unclassified; Control JF695054 BF8FCONT18Fc01.b1 Bacteria(100);Planctomycetes(100);Planctomycetacia(100);Planctomycetales(100);Planctomycetaceae(100);Isosphaera(50);unclassified; Control JF695056 BF8FCONT18Fc04.b1 Bacteria(100);Proteobacteria(100);Gammaproteobacteria(100);Xanthomonadales(100);Xanthomonadaceae(100);uncultured(64);unclassified; Control JF695057 BF8FCONT18Fc06.b1 Bacteria(100);Proteobacteria(100);Betaproteobacteria(100);Burkholderiales(100);Comamonadaceae(100);Ideonella(54);unclassified; -
Soybean Resistance Genes Specific for Different Pseudomonas Syringue Avirwlence Genes Are Auelic, Or Closely Linked, at the RPG1 Locus
Copyright 0 1995 by the Genetics Society of America Soybean Resistance Genes Specific for Different Pseudomonas syringue Avirwlence Genes are AUelic, or Closely Linked, at the RPG1 Locus Tom Ashfield,* Noel T. Keen,+ Richard I. Buzzell: and Roger W. Innes* *Department of Biology, Indiana University, Bloomington, Indiana 47405, $Department of Plant Pathology, University of California, Riverside, California 92521, and fAgriculture & Agri-food Canada, Research Station, Harrow, Ontario NOR lG0, Canada Manuscript received July6, 1995 Accepted for publication September 11, 1995 ABSTRACT RPGl and RPMl are disease resistance genes in soybean and Arabidopsis, respectively, that confer resistance to Pseudomonas syringae strains expressing the avirulence gene awB. RPMl has recently been demonstrated to have a second specificity, also conferring resistance to P. syringae strains expressing [email protected] we show that alleles, or closely linked genes, exist at the RPGl locus in soybean that are specific for either awB or awR@ml and thus can distinguish between these two avirulence genes. ESISTANCE displayed by particular plant cultivars genes specific to avirulence genes of both the soybean R to specific races of a pathogen is often mediated pathogen Psgand the tomato pathogen Pst. The inabil- by single dominant resistance genes (R-genes). Typi- ity of Pstto cause disease in any soybean cultivarcan be cally, these R-genes interact with single dominant “avir- explained, atleast in part, by the presence of a battery of ulence” (aw) genes in the pathogen. Such specific in- resistance genes in soybean that correspond to one or teractions between races of pathogens and cultivars of more avirulence genes present in all Pst strains. -
BEI Resources Product Information Sheet Catalog No. NR-51597 Pseudomonas Aeruginosa, Strain MRSN 23861
Product Information Sheet for NR-51597 Pseudomonas aeruginosa, Strain MRSN P. aeruginosa is a Gram-negative, aerobic, rod-shaped bacterium with unipolar motility that thrives in many diverse 23861 environments including soil, water and certain eukaryotic hosts. It is a key emerging opportunistic pathogen in animals, Catalog No. NR-51597 including humans and plants. While it rarely infects healthy This reagent is the tangible property of the U.S. Government. individuals, P. aeruginosa causes severe acute and chronic nosocomial infections in immunocompromised or catheterized patients, especially in patients with cystic fibrosis, burns, For research use only. Not for human use. cancer or HIV.3-5 Infections of this type are often highly antibiotic resistant, difficult to eradicate and often lead to Contributor: death. The ability of P. aeruginosa to survive on minimal Multidrug-Resistant Organism Repository and Surveillance nutritional requirements, tolerate a variety of physical Network (MRSN), Bacterial Disease Branch, Walter Reed conditions and rapidly develop resistance during the course of Army Institute of Research, Silver Spring, Maryland, USA therapy has allowed it to persist in both community and 5,6 hospital settings. Manufacturer: BEI Resources Material Provided: Each vial contains approximately 0.5 mL of bacterial culture in Product Description: Tryptic Soy broth supplemented with 10% glycerol. Bacteria Classification: Pseudomonadaceae, Pseudomonas Species: Pseudomonas aeruginosa Note: If homogeneity is required for your intended use, please Strain: MRSN 23861 purify prior to initiating work. Original Source: Pseudomonas aeruginosa (P. aeruginosa), strain MRSN 23861 was isolated in 2014 from a human Packaging/Storage: respiratory sample as part of a surveillance program in the NR-51597 was packaged aseptically in cryovials. -
Pseudomonas Syringae Subsp. Savastanoi (Ex Smith) Subsp
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, Apr. 1982, p. 146-169 Vol. 32. No. 2 0020-771 3/82/020166-O4$02.OO/O Pseudomonas syringae subsp. savastanoi (ex Smith) subsp. nov., nom. rev., the Bacterium Causing Excrescences on Oleaceae and Neriurn oleander L. J. D. JANSE Department of Bacteriology, Plant Protection Service, 6700 HC, Wageningen, The Netherlands From a study of the so-called bacterial canker of ash, caused by a variant of “Pseudomonas savastanoi” (Smith) Stevens, it became evident that this variant and the variants of “P. savastanoi” which cause olive knot and oleander knot can be distinguished from one another on the basis of their pathogenicity and host range. All isolates of “P. savastanoi” were recently classified by Dye et al. (Plant Pathol. 59:153-168,1980) as members of a single pathovar of P. syringae van Hall. It appears, however, that these isolates differ sufficiently from the other members of P. syringae to justify subspecies rank for them. The following classification and nomenclature are therefore proposed: Pseudomonas syringae subsp. savastanoi (ex Smith) subsp. nov., nom. rev., to include the olive pathogen (pathovar oleae), the ash pathogen (pathovar fraxini), and the oleander pathogen (pathovar nerii). The type strain of P. syringae subsp. savastanoi is ATCC 13522 (= NCPPB 639). “Pseudomonas savastanoi” (Smith 1908) Ste- mended in the International Code of Nomencla- vens 1913 was previously used as the name of ture of Bacteria (8). the bacterium which causes pernicious excres- According to the available data, the present cences on several species of the Oleaceae. classificationand nomenclature of the organisms (Names in quotation marks are not on the Ap- under discussion are inadequate. -
Characterization of Environmental and Cultivable Antibiotic- Resistant Microbial Communities Associated with Wastewater Treatment
antibiotics Article Characterization of Environmental and Cultivable Antibiotic- Resistant Microbial Communities Associated with Wastewater Treatment Alicia Sorgen 1, James Johnson 2, Kevin Lambirth 2, Sandra M. Clinton 3 , Molly Redmond 1 , Anthony Fodor 2 and Cynthia Gibas 2,* 1 Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA; [email protected] (A.S.); [email protected] (M.R.) 2 Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC 28223, USA; [email protected] (J.J.); [email protected] (K.L.); [email protected] (A.F.) 3 Department of Geography & Earth Sciences, University of North Carolina at Charlotte, Charlotte, NC 28223, USA; [email protected] * Correspondence: [email protected]; Tel.: +1-704-687-8378 Abstract: Bacterial resistance to antibiotics is a growing global concern, threatening human and environmental health, particularly among urban populations. Wastewater treatment plants (WWTPs) are thought to be “hotspots” for antibiotic resistance dissemination. The conditions of WWTPs, in conjunction with the persistence of commonly used antibiotics, may favor the selection and transfer of resistance genes among bacterial populations. WWTPs provide an important ecological niche to examine the spread of antibiotic resistance. We used heterotrophic plate count methods to identify Citation: Sorgen, A.; Johnson, J.; phenotypically resistant cultivable portions of these bacterial communities and characterized the Lambirth, K.; Clinton, -
Isolation and Identification of Bacterial Glum Blotch and Leaf Blight on Wheat (Triticum Aestivum L.) in Iran
African Journal of Biotechnology Vol. 9 (20), pp. 2860-2865, 17 May, 2010 Available online at http://www.academicjournals.org/AJB ISSN 1684–5315 © 2010 Academic Journals Full Length Research Paper Isolation and identification of bacterial glum blotch and leaf blight on wheat (Triticum aestivum L.) in Iran Mostafa Niknejad Kazempour1*, Maesomeh Kheyrgoo1, Hassan Pedramfar1 and Heshmat Rahimian2 1Department Plant Pathology, Faculty of Agricultural Sciences, University of Guilan, Rasht – Iran. 2Department Plant Pathology, Faculty of Agricultural Sciences, Mazanderan University, Sary – Iran. Accepted 27 March, 2009 Basal glume blotch and leaf blight of wheat caused by Pseudomonas syringae pv. atrofaciens and P. syringae pv. syringae respectively are the bacterial diseases of wheat in Iran. The disease causes damage on wheat which leads to lots of yield and crop losses in the host plants. During the spring and summer of 2005-2006 different wheat fields in Guilan province (Roodsar, Langrud, Rostamabad, loshan, and Roodbar) were surveyed. Samples were collected from infected wheats with glumes blotch and leaf blight. Infected tissues were washed with sterile distilled water and crushed in peptone water. Then 50 µl of the extract were cultured on King’s B and NA media containing cyclohexamide (50 µg/ml). After 48 to 72 h, bacterial colonies were selected and purified. On the basis of morphological, physiological and biochemical characteristics, pathogenicity and PCR with specific primers, the isolated were placed in two groups. The first group consists of 20 isolates that caused leaf blight, identified as P. syringae pv. Syringae, while the second group is made up of 18 isolates that caused basal glumes blotch identified as P. -
The Associated Growth of Pseudomonas Fluorescens
THE ASSOCIATED GROWTH OF PSEUDOMONAS FLUORESCENS, ESCHERICHIA COLI AND / OR LACTOBACILLUS PLANTARUM IN ASEPTICALLY-PREPARED FRESH GROUND BEEF AT 7 °C OR AT 4 AND 25 °C OF STORAGE DISSERTATION Presented in Partial Fulfillment of the requirements of the Degree Doctor of Philosophy in the Graduate School of the Ohio State University By Yi-Mei Sun, M.S. ***** The Ohio State University 2003 Dissertation Committee: Prof. Herbert W. Ockerman, Advisor Approved by Prof. John C. Gordon Prof. Curtis L. Knipe ___________________________ Advisor Prof. Ahmed E. Yousef Department of Animal Sciences UMI Number: 3119496 ________________________________________________________ UMI Microform 3119496 Copyright 2004 by ProQuest Information and Learning Company. All rights reserved. This microform edition is protected against unauthorized copying under Title 17, United States Code. ____________________________________________________________ ProQuest Information and Learning Company 300 North Zeeb Road PO Box 1346 Ann Arbor, MI 48106-1346 ABSTRACT This research was conducted to understand the interactions between normal background microorganisms (Pseudomonas and Lactobacillus) and Escherichia coli on solid food such as fresh ground beef. By using aseptically-obtained fresh ground beef as a model, different levels of background bacteria along with different levels of E. coli were inoculated and applied in three experiments at different storage temperatures. In Experiment I, three levels (zero, 3 logs and 6 logs) of Pseudomonas were combined with three levels (zero, 2 logs and 4 logs) of E. coli and stored at 7 ºC for 7 days. One log increase of VRBA (E. coli) counts was observed for treatments with 2 log E. coli inoculation but no changes were found for treatments with 4 log E. -
Characteristic of Pseudomonas Syringae Pv. Atrofaciens Isolated from Weeds of Wheat Field
applied sciences Article Characteristic of Pseudomonas syringae pv. atrofaciens Isolated from Weeds of Wheat Field Liudmyla Butsenko 1, Lidiia Pasichnyk 1 , Yuliia Kolomiiets 2, Antonina Kalinichenko 3,* , Dariusz Suszanowicz 3 , Monika Sporek 4 and Volodymyr Patyka 1 1 Zabolotny Institute of Microbiology and Virology, National Academy of Sciences of Ukraine, 03143 Kyiv, Ukraine; [email protected] (L.B.); [email protected] (L.P.); [email protected] (V.P.) 2 Department of Ecobiotechnology and Biodiversity, National University of Life and Environmental Sciences of Ukraine, 03143 Kyiv, Ukraine; [email protected] 3 Institute of Environmental Engineering and Biotechnology, University of Opole, 45-040 Opole, Poland; [email protected] 4 Institute of Biology, University of Opole, 45-040 Opole, Poland; [email protected] * Correspondence: [email protected]; Tel.: +48-787-321-587 Abstract: The aim of this study was the identification of the causative agent of the basal glume rot of wheat Pseudomonas syringae pv. atrofaciens from the affected weeds in wheat crops, and determination of its virulent properties. Isolation of P. syringae pv. atrofaciens from weeds of wheat crops was carried out by classical microbiological methods. To identify isolated bacteria, their morphological, cultural, biochemical, and serological properties as well as fatty acids and Random Amplification of Polymorphic DNA (RAPD)-PCR (Polymerase chain reaction) profiles with the OPA-13 primer were studied. Pathogenic properties were investigated by artificial inoculation of wheat plants and weed plants, from which bacteria were isolated. For the first time, bacteria that are virulent both for weeds and wheat were isolated from weeds growing in wheat crops. -
Staphylococcus Spp., Enterobacteriaceae and Pseudomonadaceae
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector a r c h i v e s o f o r a l b i o l o g y 5 6 ( 2 0 1 1 ) 1 0 4 1 – 1 0 4 6 availab le at www.sciencedirect.com journal homepage: http://www.elsevier.com/locate/aob Staphylococcus spp., Enterobacteriaceae and Pseudomonadaceae oral isolates from Brazilian HIV-positive patients. Correlation with CD4 cell counts and viral load a, a Graziella Nuernberg Back-Brito *, Vivian Narana Ribeiro El Ackhar , a b Silvia Maria Rodrigues Querido , Silvana Sole´o Ferreira dos Santos , a c Antonio Olavo Cardoso Jorge , Alexandre de Souza de Macedo Reis , a Cristiane Yumi Koga-Ito a Department of Oral Biosciences and Diagnosis, Laboratory of Microbiology, Sa˜ o Jose´ dos Campos Dental School, Univ Estadual Paulista/ UNESP, Brazil b Microbiology, University of Taubate´, Brazil c Day Hospital, University of Taubate´, Brazil a r t i c l e i n f o a b s t r a c t Article history: The aim was to evaluate the presence of Staphylococcus spp., Enterobacteriaceae and Pseudo- Accepted 23 February 2011 monadaceae in the oral cavities of HIV-positive patients. Forty-five individuals diagnosed as HIV-positive by ELISA and Western-blot, and under anti-retroviral therapy for at least 1 year, Keywords: were included in the study. The control group constituted 45 systemically healthy individu- HIV als matched to the HIV patients to gender, age and oral conditions. -
Pseudomonas Cerasi Sp. Nov. (Non Griffin, 1911) Isolated From
Systematic and Applied Microbiology 39 (2016) 370–377 Contents lists available at ScienceDirect Systematic and Applied Microbiology j ournal homepage: www.elsevier.de/syapm Pseudomonas cerasi sp. nov. (non Griffin, 1911) isolated from diseased ଝ tissue of cherry a,∗ b c c Monika Kałuzna˙ , Anne Willems , Joël F. Pothier , Michela Ruinelli , a a Piotr Sobiczewski , Joanna Puławska a Research Institute of Horticulture, Konstytucji 3 Maja 1/3, 96-100 Skierniewice, Poland b Laboratory of Microbiology, Dept. Biochemistry and Microbiology, Fac. Sciences, Ghent University, K.L. Ledeganckstraat 35, B-9000 Gent, Belgium c Environmental Genomics and Systems Biology Research Group, Institute of Natural Resource Sciences, Zurich University of Applied Sciences, Einsiedlerstrasse 31, CH-8820 Wädenswil, Switzerland a r t i c l e i n f o a b s t r a c t T Article history: Eight isolates of Gram-negative fluorescent bacteria (58 , 122, 374, 791, 963, 966, 970a and 1021) were Received 30 March 2016 obtained from diseased tissue of cherry trees from different regions of Poland. The symptoms resem- Received in revised form 12 May 2016 bled those of bacterial canker. Based on an analysis of 16S rDNA sequences the isolates shared the Accepted 17 May 2016 T T highest over 99.9% similarity with Pseudomonas ficuserectae JCM 2400 and P. congelans DSM 14939 . Phylogenetic analysis using housekeeping genes gyrB, rpoD and rpoB revealed that they form a sepa- Keywords: T T rate cluster and confirmed their closest relation to P. syringae NCPPB 281 and P. congelans LMG 21466 . Pseudomonas sp. T DNA–DNA hybridization between the cherry isolate 58 and the type strains of these two closely related Cherry bacterial canker species revealed relatedness values of 58.2% and 41.9%, respectively. -
Complejo Pseudomonas Syringae
TESIS DOCTORAL Biología de plásmidos y dinámica génica en el complejo Pseudomonas syringae MAITE AÑORGA GARCÍA Pamplona, 2017 Memoria presentada por MAITE AÑORGA GARCÍA Para optar al grado de Doctora por la Universidad Pública de Navarra Biología de plásmidos y dinámica génica en el complejo Pseudomonas syringae Directores Dr. JESÚS MURILLO MARTÍNEZ Dra. LEIRE BARDAJI GOIKOETXEA Catedrático de Universidad Ayudante Doctor Departamento de Producción Agraria Departamento de Producción Agraria Universidad Pública de Navarra Universidad Pública de Navarra UNIVERSIDAD PÚBLICA DE NAVARRA Pamplona, 2017 COMITÉ EVALUADOR Presidente Dr. José Manuel Palacios Alberti Departamento de Biotecnología Centro de Biotecnología y Genómica de Plantas (CBGP) Universidad Politécnica de Madrid Secretaria Dra. Emilia López-Solanilla Departamento de Biotecnología Centro de Biotecnología y Genómica de Plantas (CBGP) Universidad Politécnica de Madrid Vocal Dr. Francisco Cazorla López Departamento de Microbiología Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM) Universidad de Málaga Suplente Dr. Pablo Llop Departamento de Producción Agraria Universidad Pública de Navarra Revisores externos Dr. Jaime Cubero Dabrio Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid Dr. José Antonio Gutiérrez Barranquero Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM) Universidad de Málaga Suplente de los revisores externos Dr. José Juan Rodríguez Herva Centro de Biotecnología y Genómica de Plantas (CBGP) Universidad -
Host Specificity and Virulence of the Phytopathogenic Bacteria Pseudomonas Savastanoi Eloy Caballo Ponce Caballo Eloy
Host specificity and virulence of the phytopathogenic bacteria Pseudomonas savastanoi Eloy Caballo Ponce Caballo Eloy TESIS DOCTORAL Eloy Caballo Ponce Director: Cayo Ramos Rodríguez Programa de Doctorado: Biotecnología Avanzada TESIS DOCTORAL TESIS Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora” Universidad de Málaga – CSIC 2017 Año 2017 Memoria presentada por: Eloy Caballo Ponce para optar al grado de Doctor por la Universidad de Málaga Host specificity and virulence of the phytopathogenic bacteria Pseudomonas savastanoi Director: Cayo J. Ramos Rodríguez Catedrático. Área de Genética. Departamento de Biología Celular, Genética y Fisiología. Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM) Universidad de Málaga – Consejo Superior de Investigaciones Científicas Málaga, 2016 AUTOR: Eloy Caballo Ponce http://orcid.org/0000-0003-0501-3321 EDITA: Publicaciones y Divulgación Científica. Universidad de Málaga Esta obra está bajo una licencia de Creative Commons Reconocimiento-NoComercial- SinObraDerivada 4.0 Internacional: http://creativecommons.org/licenses/by-nc-nd/4.0/legalcode Cualquier parte de esta obra se puede reproducir sin autorización pero con el reconocimiento y atribución de los autores. No se puede hacer uso comercial de la obra y no se puede alterar, transformar o hacer obras derivadas. Esta Tesis Doctoral está depositada en el Repositorio Institucional de la Universidad de Málaga (RIUMA): riuma.uma.es COMITÉ EVALUADOR Presidente Dr. Jesús Murillo Martínez Departamento de Producción Agraria Universidad Pública de Navarra Secretario Dr. Francisco Manuel Cazorla López Departamento de Microbiología Universidad de Málaga Vocal Dra. Chiaraluce Moretti Departamento de Ciencias Agrarias, Alimentarias y Medioambientales Universidad de Perugia Suplentes Dr. Pablo Rodríguez Palenzuela Departamento de Biotecnología – Biología Vegetal Universidad Politécnica de Madrid Dr.