ANNOTATED CHECKLIST and KEY for SMUT FUNGI in COLOMBIA* Lista Anotada Y Clave Para Los Ustilaginales De Colombia
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Axpcoords & Parallel Axparafit: Statistical Co-Phylogenetic Analyses
BMC Bioinformatics BioMed Central Software Open Access AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa Alexandros Stamatakis*1,2, Alexander F Auch3, Jan Meier-Kolthoff3 and Markus Göker4 Address: 1École Polytechnique Fédérale de Lausanne, School of Computer & Communication Sciences, Laboratory for Computational Biology and Bioinformatics STATION 14, CH-1015 Lausanne, Switzerland, 2Swiss Institute of Bioinformatics, 3Center for Bioinformatics (ZBIT), Sand 14, Tübingen, University of Tübingen, Germany and 4Organismic Botany/Mycology, Auf der Morgenstelle 1, Tübingen, University of Tübingen, Germany Email: Alexandros Stamatakis* - [email protected]; Alexander F Auch - [email protected]; Jan Meier- Kolthoff - [email protected]; Markus Göker - [email protected] * Corresponding author Published: 22 October 2007 Received: 26 June 2007 Accepted: 22 October 2007 BMC Bioinformatics 2007, 8:405 doi:10.1186/1471-2105-8-405 This article is available from: http://www.biomedcentral.com/1471-2105/8/405 © 2007 Stamatakis et al.; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: Current tools for Co-phylogenetic analyses are not able to cope with the continuous accumulation of phylogenetic data. The sophisticated statistical test for host-parasite co-phylogenetic analyses implemented in Parafit does not allow it to handle large datasets in reasonable times. The Parafit and DistPCoA programs are the by far most compute-intensive components of the Parafit analysis pipeline. -
Biology and Histopathology of Ustilago Filiformis (= U. Longissima), a Causal Agent of Leaf Stripe Smut of Glyceria Multiflora
JOURNAL OF PLANT PROTECTION RESEARCH Vol. 55, No. 4 (2015) DOI: 10.1515/jppr-2015-0059 Biology and histopathology of Ustilago filiformis (=U. longissima), a causal agent of leaf stripe smut of Glyceria multiflora Analía Perelló1*, Marta Mónica Astiz Gasso2, Marcelo Lovisolo3 1 Technologist Institute Santa Catalina (IFSC), 1836 Llavallol, Faculty of Agricultural and Forestry Sciences, National University of La Plata, Street 60 and 119, Buenos Aires, Argentina 2 Faculty of Agricultural and Forestry Sciences, National University of La Plata, Street 60 and 119, Buenos Aires, Argentina 3 Chair of Botany, Faculty of Agricultural Sciences, National University of Lomas de Zamora, 1832 Lomas de Zamora, Buenos Aires, Argentina Received: March 16, 2015 Accepted: November 12, 2015 Abstract: The aims of this study were to clarify the reproductive biology of the Ustilago filiformis Schrank, as causal agent of the stripe smut of Glyceria multiflora, determine the infection process of the pathogen and analyze the histological changes associated host- Glyceria any fungus attack. Moreover, the life cycle of the fungus was elucidated for the first time. Both teliospores and basidiospores were found to be equally efficient in producing the infection in Glyceria plants after the plants had been inoculated. These results constitute an important contribution for the understanding of the epidemiology of the disease. Key words: basidiospores, infection cycle, stripe smut, teliospores Introduction dia, the USSR (Siberia); Europe – Austria, Bulgaria, Czech, Smut fungi are Basidiomycota fungi belonging to the Denmark, Finland, France, Germany, Hungary, Italy, Po- order Ustilaginales. They received this name due to the land, Romania, Spain, Sweden, Switzerland, the United very conspicuous symptoms of black teliospore masses Kingdom, the former Yugoslavia; and North and South resembling smut, which they often produce on the host America. -
Taxonomy and Distribution of Microbotryum Pinguiculae, a Species of Smut Fungi New for the Carpathians
Polish Botanical Journal 50(2): 153–158, 2005 TAXONOMY AND DISTRIBUTION OF MICROBOTRYUM PINGUICULAE, A SPECIES OF SMUT FUNGI NEW FOR THE CARPATHIANS MARCIN PIĄTEK, WIESŁAW MUŁENKO, JOLANTA PIĄTEK & KAMILA BACIGÁLOVÁ Abstract. Microbotryum pinguiculae (Rostr.) Vánky on Pinguicula alpina L., a rarely collected smut fungus belonging to the genus Microbotryales in the class Urediniomycetes, is reported for the fi rst time from the Carpathians as well as from Poland and Slovakia. The species is described and illustrated by a drawing of infected plants and SEM micrographs of spores. Microbotryum pinguiculae is a very rare fungus parasitizing various species of Pinguicula (Lentibulariaceae). It is known from Europe, Asia and North America, where it shows a true arctic-alpine type of distribution. Taxonomically its generic position is not completely stabilized and needs further studies employing modern techniques (e.g., molecular, ultrastructural). Key words: Microbotryum, Pinguicula alpina, smut fungi, Microbotryales, Urediniomycetes, Carpathians, Poland, Slovakia Marcin Piątek, Department of Mycology, W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, Poland; e-mail: [email protected] Wiesław Mułenko, Department of General Botany, Maria Curie-Skłodowska University, Akademicka 19, PL-20-033 Lublin, Poland; e-mail: [email protected] Jolanta Piątek, Department of Phycology, W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, Poland; e-mail: [email protected] Kamila Bacigálová, Institute of Botany, Slovak Academy of Sciences, Dúbravská cesta 14, SK-845-23 Bratislava, Slovak Republic; e-mail: [email protected] INTRODUCTION In the current circumscription, the smut genus species occurs in other populations of Pinguicula Microbotryum Lév. -
Corn Smuts, RPD No
report on RPD No. 203 PLANT February 1990 DEPARTMENT OF CROP SCIENCES DISEASE UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN CORN SMUTS Corn smuts occur throughout the world. Common corn smut, caused by the fungus Ustilago zeae (synonym U. maydis), and head smut, caused by the fungus Sporisorium holci-sorghi (synonyms Sphacelotheca reiliana, Sorosporium reilianum and Sporisorium reilianum), are spectacular in appearance and easily distinguished. Common smut occurs worldwide wherever corn (maize) is grown, by presence of large conspicuous galls or replacement of grain kernels with smut sori. The quality of the remaining yield is often reduced by the presence of black smut spores on the surface of healthy kernels. COMMON SMUT Common smut is well known to all Illinois growers. The fungus attacks only corn–field corn (dent and flint), Indian or ornamental corn, popcorn, and sweet corn–and the closely related teosinte (Zea mays subsp. mexicana) but is most destructive to sweet corn. The smut is most prevalent on young, actively growing plants that have Figure 1. Infection of common corn smut been injured by detasseling in seed fields, hail, blowing soil or and on the ear. Smut galls are covered by the particles, insects, “buggy-whipping”, and by cultivation or spraying silvery white membrane. equipment. Corn smut differs from other cereal smuts in that any part of the plant above ground may be attacked, from the seedling stage to maturity. Losses from common smut are highly variable and rather difficult to measure, ranging from a trace up to 10 percent or more in localized areas. In rare cases, the loss in a particular field of sweet corn may approach 100 percent. -
Physiologic Specialization Within Sphacelotheca Reiliana (Kühn) Clint
South Dakota State University Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange Electronic Theses and Dissertations 1960 Physiologic specialization within Sphacelotheca reiliana (Kühn) Clint. on Sorghum and the Biology of its Chlamydospores in the Soil Ibrahim Aziz Al-Sohaily Follow this and additional works at: https://openprairie.sdstate.edu/etd Recommended Citation Al-Sohaily, Ibrahim Aziz, "Physiologic specialization within Sphacelotheca reiliana (Kühn) Clint. on Sorghum and the Biology of its Chlamydospores in the Soil" (1960). Electronic Theses and Dissertations. 2704. https://openprairie.sdstate.edu/etd/2704 This Dissertation - Open Access is brought to you for free and open access by Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. For more information, please contact [email protected]. '... PHYSIOLOGIC SPECIALIZATION WITHI.N SPHACELOTHECA REILIANA (KUHN) CLINT. ON SORGHUM AND THE BIOLOOY OF ITS CHLAMIDOSPORES I.N THE SOIL BY IBRAHIM AZIZ AL-SOHAILY A thesis suanitted in partial fulfillment of the requirements for the degree Ibctor of Philosophy, Department of Plant Pathology, South Dakota State College of Agriculture and Mechanic Arts December, 1960 '....1 A S ATE COLLEGE LIB 7 , PHYSIOLOOIC SPECIALIZATION WITHIN SPHACELOTHECA REILIANA (Kum�) CLINT. ON SORGHUM AND THE BIOLOGY OF ITS CHLAl1YOOSPORES Ill THE SOIL Abstract IBRAIIDl AZIZ AL-SO'rIAILY Under the �ervision of Professor George Saneniuk Corresponding to the title, the present study was concerned with two aspects. In the first of these, two chlamydosporous sori from corn were collected from California and Washington and 18 chlamydosporous sori from sorghum were collected from California, New Mexico, Texas and India. -
Phylogenetic Studies on Nuclear Large Subunit Ribosomal DNA Sequences of Smut Fungi and Related Taxar
2045 Phylogenetic studies on nuclear large subunit ribosomal DNA sequences of smut fungi and related taxar Dominik Begerow, Robert Bauer, and Franz Oberwinkler Abstract: To show phylogenetic relationships among the smut fungi and thcir relatives. we sequenced a part of the nuclear LSU rDNA from 43 different species of smut fungi and related taxa. Our data were combined with the existing sequences of seven further smut fungi and 17 other basidiomycetes. Two sets of sequences were analyzed. The first set with a representative number of simple septate basidiomycetes, complex scptate basidiomycetes, and smut fungi was analyzed with the neighbor-joining method to estimate the general topology of the basidiomycetes phylogeny and the positions of the smut fungi. The tripartite subclassification of the basidiomycetes into the Urediniomycetes, Ustilaginomycetes, and Hymcnomycetes was confirmed and two groups of smut fungi appeared. Thc smut genera Aurantiosporiurn, Microbotrl-unr, Fulvisporium, and Ustilentr-loma are members of the Urediniomycetes, whereas the other smut species tested are members of the Ustilaginomycetes wrth Entorrhiz.a as a basal taxon. The second set of 46 Ustilaginomycetes was analyzed using the neighbor-joining and the maximum parsimony methods to show the inner topology of the Ustilaginomycetes. The results indicated three major lineages among Ustilaginomycetes corresponding to the Entorrhizomycetidae, Exobasidiomycetidae, and Ustilaginomycetidae. The Entorrhizomycetidae are represented by Entorrhiza species. The Ustilaginomycctidae contain at least two groups, thc Urocystales and Ustilaginales. The Exobasidiomycetidae include five orders, i.e., Doassansiales, Entylomatales, Exobasidiales. Georgefischeriales. and Tilletiales, and Graphiola phoenicis and Microstroma juglandis. Our results support a classification mainly based on ultrastructure. The description of the Glomosporiaceae is emended. -
Corn Smuts S
A Pacific Northwest Extension Publication Oregon State University • University of Idaho • Washington State University PNW 647 • July 2013 Corn Smuts S. K. Mohan, P. B. Hamm, G. H. Clough, and L. J. du Toit orn smuts are widely distributed throughout the world. The incidence of corn smuts in the Pacific Northwest (PNW) varies Cby location and is usually low. Nonetheless, these diseases occasionally cause significant economic losses when susceptible cultivars are grown under conditions favorable for disease development. Smut diseases of corn are, in general, more destructive to sweet corn than to field corn. The term smut is derived from the powdery, dark brown to black, soot-like mass of spores produced in galls. These galls can form on various plant parts. Three types of smut infect corn—common smut, caused by Ustilago maydis (= Ustilago zeae); head smut, caused by Sphacelotheca reiliana; and false smut, caused by Ustilaginoidea virens. False smut is not a concern in the PNW, so this publication deals University S. Krishna by State Mohan,Photo © Oregon only with common and head smuts. Figure 1. Common smut galls on an ear of sweet corn. Each gall represents a single kernel infected by the common Common smut smut fungus. Common smut is caused by the fungal pathogen U. maydis and is also known as boil smut or blister smut (Figure 1). Common smut occurs throughout PNW corn production areas, although it is less common in western Oregon and western Washington than east of the Cascade Mountains. Infection in commercial plantings may result in considerable damage and yield loss in some older sweet corn cultivars, but yield loss in some of the newer, less susceptible cultivars is rarely significant. -
The Effect of Low Temperature on Growth and Development of Phalaenopsis
Pak. J. Bot., 52(5): 1849-1855, 2020. DOI: http://dx.doi.org/10.30848/PJB2020-5(17) DEVELOPMENT OF A dCAPS MARKER BASED ON A MINOR RESISTANCE GENE RELATED TO HEAD SMUT IN BIN8.03 IN MAIZE LIN ZHANG1#, XUAN ZHOU2#, XIAOHUI SUN1, YU ZHOU1, XING ZENG1, ZHOUFEI WANG3, ZHENHUA WANG1 AND HONG DI1* 1Northeast Agricultural University, Harbin 150030, Heilongjiang Province, China 2Promotion Station of Machinery Technology for Agricultural and Animal Husbandry, Huhhot 010000, Inner Mongolia Autonomous Region, China 3The Laboratory of Seed Science and Technology, Guangdong Key Laboratory of Plant Molecular Breeding, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, South China Agricultural University, Guangzhou, China #Lin Zhang and Xuan Zhou contributed equally to this research. *Corresponding author’s email: [email protected] Abstract Head smut can cause maize yield losses of up to 80% in the maize-growing region of Northern China. Molecular markers based on candidate resistance genes have proved to be useful for highly sensitive selection of resistance in maize breeding programs. In the present study, a SNP (single-nucleotide polymorphism) in resistant and susceptible maize lines was identified within the nucleotide-binding site (NBS)-leucine-rich repeat (LRR) gene GRMZM2G047152 in bin 8.03. Using this SNP, we developed the derived cleaved amplified polymorphic sequence marker DNdCAPS8.03-1. The molecular coincidence rate of the combination of markers DNdCAPS8.03-1 and LSdCAP2 (related to the QTL qHS2.09) was higher than that of a single marker in a set of 56 inbred maize lines belonging to five heterotic groups. These results provide information and tools that will prove to be useful in marker-assisted selection (MAS) in breeding maize for head smut resistance. -
A Higher-Level Phylogenetic Classification of the Fungi
mycological research 111 (2007) 509–547 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres A higher-level phylogenetic classification of the Fungi David S. HIBBETTa,*, Manfred BINDERa, Joseph F. BISCHOFFb, Meredith BLACKWELLc, Paul F. CANNONd, Ove E. ERIKSSONe, Sabine HUHNDORFf, Timothy JAMESg, Paul M. KIRKd, Robert LU¨ CKINGf, H. THORSTEN LUMBSCHf, Franc¸ois LUTZONIg, P. Brandon MATHENYa, David J. MCLAUGHLINh, Martha J. POWELLi, Scott REDHEAD j, Conrad L. SCHOCHk, Joseph W. SPATAFORAk, Joost A. STALPERSl, Rytas VILGALYSg, M. Catherine AIMEm, Andre´ APTROOTn, Robert BAUERo, Dominik BEGEROWp, Gerald L. BENNYq, Lisa A. CASTLEBURYm, Pedro W. CROUSl, Yu-Cheng DAIr, Walter GAMSl, David M. GEISERs, Gareth W. GRIFFITHt,Ce´cile GUEIDANg, David L. HAWKSWORTHu, Geir HESTMARKv, Kentaro HOSAKAw, Richard A. HUMBERx, Kevin D. HYDEy, Joseph E. IRONSIDEt, Urmas KO˜ LJALGz, Cletus P. KURTZMANaa, Karl-Henrik LARSSONab, Robert LICHTWARDTac, Joyce LONGCOREad, Jolanta MIA˛ DLIKOWSKAg, Andrew MILLERae, Jean-Marc MONCALVOaf, Sharon MOZLEY-STANDRIDGEag, Franz OBERWINKLERo, Erast PARMASTOah, Vale´rie REEBg, Jack D. ROGERSai, Claude ROUXaj, Leif RYVARDENak, Jose´ Paulo SAMPAIOal, Arthur SCHU¨ ßLERam, Junta SUGIYAMAan, R. Greg THORNao, Leif TIBELLap, Wendy A. UNTEREINERaq, Christopher WALKERar, Zheng WANGa, Alex WEIRas, Michael WEISSo, Merlin M. WHITEat, Katarina WINKAe, Yi-Jian YAOau, Ning ZHANGav aBiology Department, Clark University, Worcester, MA 01610, USA bNational Library of Medicine, National Center for Biotechnology Information, -
Comparative Analysis of the Maize Smut Fungi Ustilago Maydis and Sporisorium Reilianum
Comparative Analysis of the Maize Smut Fungi Ustilago maydis and Sporisorium reilianum Dissertation zur Erlangung des Doktorgrades der Naturwissenschaften (Dr. rer. nat.) dem Fachbereich Biologie der Philipps-Universität Marburg vorgelegt von Bernadette Heinze aus Johannesburg Marburg / Lahn 2009 Vom Fachbereich Biologie der Philipps-Universität Marburg als Dissertation angenommen am: Erstgutachterin: Prof. Dr. Regine Kahmann Zweitgutachter: Prof. Dr. Michael Bölker Tag der mündlichen Prüfung: Die Untersuchungen zur vorliegenden Arbeit wurden von März 2003 bis April 2007 am Max-Planck-Institut für Terrestrische Mikrobiologie in der Abteilung Organismische Interaktionen unter Betreuung von Dr. Jan Schirawski durchgeführt. Teile dieser Arbeit sind veröffentlicht in : Schirawski J, Heinze B, Wagenknecht M, Kahmann R . 2005. Mating type loci of Sporisorium reilianum : Novel pattern with three a and multiple b specificities. Eukaryotic Cell 4:1317-27 Reinecke G, Heinze B, Schirawski J, Büttner H, Kahmann R and Basse C . 2008. Indole-3-acetic acid (IAA) biosynthesis in the smut fungus Ustilago maydis and its relevance for increased IAA levels in infected tissue and host tumour formation. Molecular Plant Pathology 9(3): 339-355. Erklärung Erklärung Ich versichere, dass ich meine Dissertation mit dem Titel ”Comparative analysis of the maize smut fungi Ustilago maydis and Sporisorium reilianum “ selbständig, ohne unerlaubte Hilfe angefertigt und mich dabei keiner anderen als der von mir ausdrücklich bezeichneten Quellen und Hilfen bedient habe. Diese Dissertation wurde in der jetzigen oder einer ähnlichen Form noch bei keiner anderen Hochschule eingereicht und hat noch keinen sonstigen Prüfungszwecken gedient. Ort, Datum Bernadette Heinze In memory of my fathers Jerry Goodman and Christian Heinze. “Every day I remind myself that my inner and outer life are based on the labors of other men, living and dead, and that I must exert myself in order to give in the same measure as I have received and am still receiving. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Redalyc.NFLUENCE of PLANTING DEPTHS on the INCIDENCE OF
Tropical and Subtropical Agroecosystems E-ISSN: 1870-0462 [email protected] Universidad Autónoma de Yucatán México Prom, Louis K.; Montes-Garcia, Noe; Odvody, Gary N. NFLUENCE OF PLANTING DEPTHS ON THE INCIDENCE OF SORGHUM HEAD SMUT, CAUSED BY Sporisorium reilianum Tropical and Subtropical Agroecosystems, vol. 17, núm. 1, 2014, pp. 1-4 Universidad Autónoma de Yucatán Mérida, Yucatán, México Available in: http://www.redalyc.org/articulo.oa?id=93930735014 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Tropical and Subtropical Agroecosystems, 17 (2014): 33 - 38 Short note [Nota corta] INFLUENCE OF PLANTING DEPTHS ON THE INCIDENCE OF SORGHUM HEAD SMUT, CAUSED BY Sporisorium reilianum [INFLUENCIA DE LA PROFUNDIDAD DE SIEMBRA EN LA INCIDENCIA DEL CARBÓN DE LA PANOJA CAUSADA POR Sporisorium reilianum] Louis K. Prom1*, Noe Montes-Garcia2, and Gary N. Odvody3 1USDA-ARS, Southern Plains Agricultural Research Center, Crop Germplasm Research Unit, 2765 F & B Road, College Station, Texas 77845. Tel. # (979) 260-9393. E-mail: [email protected] 2Instituto Nacional de Investigaciones Forestales, Agricolas y Pecuarias, Centro de Investigación Regional del Noreste, Rio Bravo, Tamaulipas, Mexico. 3Department of Plant Pathology and Microbiology, Texas A&M University Agricultural Research and Extension Center, Corpus Christi, TX 78406 *Corresponding author SUMMARY RESUMEN The study was conducted at the Texas A&M El estudio fue realizado en la Estación Experimental Experiment Station in Beeville, TX, to determine the de Texas A&M en Beeville, TX, para determinar el effect of planting depths on the incidence of sorghum efecto de la profundidad de siembra en la incidencia head smut.