Complete Assembly of the Genome of an Acidovorax Citrulli Strain Reveals a Naturally Occurring Plasmid in This Species
fmicb-10-01400 June 19, 2019 Time: 15:19 # 1 ORIGINAL RESEARCH published: 20 June 2019 doi: 10.3389/fmicb.2019.01400 Complete Assembly of the Genome of an Acidovorax citrulli Strain Reveals a Naturally Occurring Plasmid in This Species Rongzhi Yang1, Diego Santos Garcia2, Francisco Pérez Montaño1,3, Gustavo Mateus da Silva1, Mei Zhao4, Irene Jiménez Guerrero1, Tally Rosenberg1, Gong Chen4, Inbar Plaschkes5, Shai Morin2, Ron Walcott4 and Saul Burdman1* 1 Department of Plant Pathology and Microbiology, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel, 2 Department of Entomology, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel, 3 Department of Microbiology, University of Seville, Seville, Spain, 4 Department of Plant Pathology, University of Georgia, Athens, GA, United States, 5 Bioinformatics Unit, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel Edited by: Martin G. Klotz, Washington State University, Acidovorax citrulli is the causal agent of bacterial fruit blotch (BFB), a serious threat United States to cucurbit crop production worldwide. Based on genetic and phenotypic properties, Reviewed by: A. citrulli strains are divided into two major groups: group I strains have been generally Robert Wilson Jackson, isolated from melon and other non-watermelon cucurbits, while group II strains are University of Reading, United Kingdom closely associated with watermelon. In a previous study, we reported the genome Tingchang Zhao, of the group I model strain, M6. At that time, the M6 genome was sequenced by Chinese Academy of Agricultural Sciences, China MiSeq Illumina technology, with reads assembled into 139 contigs.
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