Can Sinners Become Saints in Freshwater Fish Conservation?
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Edna Assay Development
Environmental DNA assays available for species detection via qPCR analysis at the U.S.D.A Forest Service National Genomics Center for Wildlife and Fish Conservation (NGC). Asterisks indicate the assay was designed at the NGC. This list was last updated in June 2021 and is subject to change. Please contact [email protected] with questions. Family Species Common name Ready for use? Mustelidae Martes americana, Martes caurina American and Pacific marten* Y Castoridae Castor canadensis American beaver Y Ranidae Lithobates catesbeianus American bullfrog Y Cinclidae Cinclus mexicanus American dipper* N Anguillidae Anguilla rostrata American eel Y Soricidae Sorex palustris American water shrew* N Salmonidae Oncorhynchus clarkii ssp Any cutthroat trout* N Petromyzontidae Lampetra spp. Any Lampetra* Y Salmonidae Salmonidae Any salmonid* Y Cottidae Cottidae Any sculpin* Y Salmonidae Thymallus arcticus Arctic grayling* Y Cyrenidae Corbicula fluminea Asian clam* N Salmonidae Salmo salar Atlantic Salmon Y Lymnaeidae Radix auricularia Big-eared radix* N Cyprinidae Mylopharyngodon piceus Black carp N Ictaluridae Ameiurus melas Black Bullhead* N Catostomidae Cycleptus elongatus Blue Sucker* N Cichlidae Oreochromis aureus Blue tilapia* N Catostomidae Catostomus discobolus Bluehead sucker* N Catostomidae Catostomus virescens Bluehead sucker* Y Felidae Lynx rufus Bobcat* Y Hylidae Pseudocris maculata Boreal chorus frog N Hydrocharitaceae Egeria densa Brazilian elodea N Salmonidae Salvelinus fontinalis Brook trout* Y Colubridae Boiga irregularis Brown tree snake* -
Three New Pupfish Species, Cyprinodon (Teleostei, Cyprinodontidae), from Chihuahua, México, and Arizona, USA Author(S): W
Three New Pupfish Species, Cyprinodon (Teleostei, Cyprinodontidae), from Chihuahua, México, and Arizona, USA Author(s): W. L. Minckley, Robert Rush Miller and Steven Mark Norris Source: Copeia, Vol. 2002, No. 3 (Aug. 15, 2002), pp. 687-705 Published by: American Society of Ichthyologists and Herpetologists (ASIH) Stable URL: http://www.jstor.org/stable/1448150 . Accessed: 23/07/2014 15:57 Your use of the JSTOR archive indicates your acceptance of the Terms & Conditions of Use, available at . http://www.jstor.org/page/info/about/policies/terms.jsp . JSTOR is a not-for-profit service that helps scholars, researchers, and students discover, use, and build upon a wide range of content in a trusted digital archive. We use information technology and tools to increase productivity and facilitate new forms of scholarship. For more information about JSTOR, please contact [email protected]. American Society of Ichthyologists and Herpetologists (ASIH) is collaborating with JSTOR to digitize, preserve and extend access to Copeia. http://www.jstor.org This content downloaded from 128.123.44.23 on Wed, 23 Jul 2014 15:57:21 PM All use subject to JSTOR Terms and Conditions Copeia,2002(3), pp. 687-705 Three New Pupfish Species, Cyprinodon(Teleostei, Cyprinodontidae), from Chihuahua, Mexico, and Arizona, USA W. L. MINCKLEY,ROBERT RUSH MILLER,AND STEVENMARK NORRIS Three new species of Cyprinodon(Teleostei, Cyprinodontidae)are described,each long recognized as distinct. Cyprinodonpisteri occupies a varietyof systems and hab- itats in the Lago de Guzmin complex basin in northern Chihuahua,Mexico. It is distinguishedby its dusky to black dorsal fin and narrowor inconspicuousterminal bar on the caudal fin in mature males. -
Identification of Priority Areas for the Conservation of Stream Fish Assemblages: Implications for River Management in France A
Identification of Priority Areas for the Conservation of Stream Fish Assemblages: Implications for River Management in France A. Maire, P. Laffaille, J.F. Maire, L. Buisson To cite this version: A. Maire, P. Laffaille, J.F. Maire, L. Buisson. Identification of Priority Areas for the Conservation of Stream Fish Assemblages: Implications for River Management in France. River Research and Applications, Wiley, 2016, 33 (4), pp.524-537. 10.1002/rra.3107. hal-01426354 HAL Id: hal-01426354 https://hal.archives-ouvertes.fr/hal-01426354 Submitted on 2 Jul 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License IDENTIFICATION OF PRIORITY AREAS FOR THE CONSERVATION OF STREAM FISH ASSEMBLAGES: IMPLICATIONS FOR RIVER MANAGEMENT IN FRANCE A. MAIREa*,†, P. LAFFAILLEb,c, J.-F. MAIREd AND L. BUISSONb,e a Irstea; UR HYAX, Pôle Onema-Irstea Hydroécologie des plans d’eau; Centre d’Aix-en-Provence, Aix-en-Provence, France b CNRS; UMR 5245 EcoLab, (Laboratoire Ecologie Fonctionnelle et Environnement), Toulouse, France c Université de Toulouse, INP, UPS; EcoLab; ENSAT, Castanet Tolosan, France d ONERA, The French Aerospace Lab Composites Department, Châtillon, France e Université de Toulouse, INP, UPS; EcoLab, Toulouse, France ABSTRACT Financial and human resources allocated to biodiversity conservation are often limited, making it impossible to protect all natural places, and priority areas for protection must be identified. -
Distribution of Amargosa River Pupfish (Cyprinodon Nevadensis Amargosae) in Death Valley National Park, CA
California Fish and Game 103(3): 91-95; 2017 Distribution of Amargosa River pupfish (Cyprinodon nevadensis amargosae) in Death Valley National Park, CA KRISTEN G. HUMPHREY, JAMIE B. LEAVITT, WESLEY J. GOLDSMITH, BRIAN R. KESNER, AND PAUL C. MARSH* Native Fish Lab at Marsh & Associates, LLC, 5016 South Ash Avenue, Suite 108, Tempe, AZ 85282, USA (KGH, JBL, WJG, BRK, PCM). *correspondent: [email protected] Key words: Amargosa River pupfish, Death Valley National Park, distribution, endangered species, monitoring, intermittent streams, range ________________________________________________________________________ Amargosa River pupfish (Cyprinodon nevadensis amargosae), is one of six rec- ognized subspecies of Amargosa pupfish (Miller 1948) and survives in waters embedded in a uniquely harsh environment, the arid and hot Mojave Desert (Jaeger 1957). All are endemic to the Amargosa River basin of southern California and Nevada (Moyle 2002). Differing from other spring-dwelling subspecies of Amargosa pupfish (Cyprinodon ne- vadensis), Amargosa River pupfish is riverine and the most widely distributed, the extent of which has been underrepresented prior to this study (Moyle et al. 2015). Originating on Pahute Mesa, Nye County, Nevada, the Amargosa River flows intermittently, often under- ground, south past the towns of Beatty, Shoshone, and Tecopa and through the Amargosa River Canyon before turning north into Death Valley National Park and terminating at Badwater Basin (Figure 1). Amargosa River pupfish is data deficient with a distribution range that is largely unknown. The species has been documented in Tecopa Bore near Tecopa, Inyo County, CA (Naiman 1976) and in the Amargosa River Canyon, Inyo and San Bernardino Counties, CA (Williams-Deacon et al. -
The Extinction of the Catarina Pupfish Megupsilon Aporus and the Implications for the Conservation of Freshwater Fish in Mexico
The extinction of the Catarina pupfish Megupsilon aporus and the implications for the conservation of freshwater fish in Mexico A RCADIO V ALDÉS G ONZÁLEZ,LOURDES M ARTÍNEZ E STÉVEZ M A .ELENA Á NGELES V ILLEDA and G ERARDO C EBALLOS Abstract Extinctions are occurring at an unprecedented ; Régnier et al., ). Since the start of the st century it rate as a consequence of human activities. Vertebrates con- has become clear that population depletion and extinction stitute the best-known group of animals, and thus the group of both freshwater and marine fishes is a severe and wide- for which there are more accurate estimates of extinctions. spread problem (e.g. Ricciardi & Rasmussen, ; Myers Among them, freshwater fishes are particularly threatened &Worm,; Olden et al., ; Burkhead, ). and many species are declining. Here we report the extinc- Extinction of freshwater fishes has been relatively well tion of an endemic freshwater fish of Mexico, the Catarina documented in North America (e.g. Miller et al., ; pupfish Megupsilon aporus, the sole species of the genus Burkhead, ). A compilation of the conservation status Megupsilon. We present a synopsis of the discovery and de- of freshwater fishes in Mexico has revealed that species scription of the species, the threats to, and degradation of, its have become extinct in the wild or have been extirpated habitat, and the efforts to maintain the species in captivity from the country, and . (% of all species in before it became extinct in . The loss of the Catarina Mexico) are facing extinction (IUCN, ; Ceballos et al., pupfish has evolutionary and ecological implications, and b; Table ). -
Extinction Rates in North American Freshwater Fishes, 1900–2010 Author(S): Noel M
Extinction Rates in North American Freshwater Fishes, 1900–2010 Author(s): Noel M. Burkhead Source: BioScience, 62(9):798-808. 2012. Published By: American Institute of Biological Sciences URL: http://www.bioone.org/doi/full/10.1525/bio.2012.62.9.5 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Articles Extinction Rates in North American Freshwater Fishes, 1900–2010 NOEL M. BURKHEAD Widespread evidence shows that the modern rates of extinction in many plants and animals exceed background rates in the fossil record. In the present article, I investigate this issue with regard to North American freshwater fishes. From 1898 to 2006, 57 taxa became extinct, and three distinct populations were extirpated from the continent. Since 1989, the numbers of extinct North American fishes have increased by 25%. From the end of the nineteenth century to the present, modern extinctions varied by decade but significantly increased after 1950 (post-1950s mean = 7.5 extinct taxa per decade). -
Identification and Modelling of a Representative Vulnerable Fish Species for Pesticide Risk Assessment in Europe
Identification and Modelling of a Representative Vulnerable Fish Species for Pesticide Risk Assessment in Europe Von der Fakultät für Mathematik, Informatik und Naturwissenschaften der RWTH Aachen University zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften genehmigte Dissertation vorgelegt von Lara Ibrahim, M.Sc. aus Mazeraat Assaf, Libanon Berichter: Universitätsprofessor Dr. Andreas Schäffer Prof. Dr. Christoph Schäfers Tag der mündlichen Prüfung: 30. Juli 2015 Diese Dissertation ist auf den Internetseiten der Universitätsbibliothek online verfügbar Erklärung Ich versichere, dass ich diese Doktorarbeit selbständig und nur unter Verwendung der angegebenen Hilfsmittel angefertigt habe. Weiterhin versichere ich, die aus benutzten Quellen wörtlich oder inhaltlich entnommenen Stellen als solche kenntlich gemacht zu haben. Lara Ibrahim Aachen, am 18 März 2015 Zusammenfassung Die Zulassung von Pflanzenschutzmitteln in der Europäischen Gemeinschaft verlangt unter anderem eine Abschätzung des Risikos für Organismen in der Umwelt, die nicht Ziel der Anwendung sind. Unvertretbare Auswirkungen auf den Naturhalt sollen vermieden werden. Die ökologische Risikoanalyse stellt die dafür benötigten Informationen durch eine Abschätzung der Exposition der Organismen und der sich daraus ergebenden Effekte bereit. Die Effektabschätzung beruht dabei hauptsächlich auf standardisierten ökotoxikologischen Tests im Labor mit wenigen, oft nicht einheimischen Stellvertreterarten. In diesen Tests werden z. B. Effekte auf das Überleben, das Wachstum und/oder die Reproduktion von Fischen bei verschiedenen Konzentrationen der Testsubstanz gemessen und Endpunkte wie die LC50 (Lethal Concentrations for 50%) oder eine NOEC (No Observed Effect Concentration, z. B. für Wachstum oder Reproduktionsparameter) abgeleitet. Für Fische und Wirbeltiere im Allgemeinen beziehen sich die spezifischen Schutzziele auf das Überleben von Individuen und die Abundanz und Biomasse von Populationen. -
El Estado De La Biodiversidad De Los Vertebrados Españoles. Causas De La Riqueza De Especies Y Actualización Taxonómica
El Estado dE la biodivErsidad dE los vErtEbrados EspañolEs 285 El estado de la biodiversidad de los Vertebrados españoles. Causas de la riqueza de especies y actualización taxonómica The state of the biodiversity of Spanish Vertebrates. Causes of the species richness and updated taxonomy Javier Morales Martín y Miguel Lizana Avia Dpto Biología Animal. Universidad de Salamanca. Campus Miguel de Unamuno, 37007. Salamanca. [email protected]; [email protected] Palabras clave: biodiversidad, conservación, vertebrados, biogeografía, taxonomía, España Key words: biodiversity, conservation, vertebrates, biogeography, taxonomy, Spain rEsumEn En la última década se han producido varias evaluaciones del estado de conservación de nuestra fauna vertebrada sobre los datos iniciales disponibles en la década de los 90’s a través de los Atlas y Libros Rojos a escala nacional (2001 a 2007) de las cinco clases de vertebrados terrestres y/o epicontinentales. Por otro lado la aplicación de técnicas genéticas a la taxonomía nomenclatural ha producido numerosos cambios, y otros aún en proceso, sobre las listas asentadas en la literatura científica, ya que muchas de las subespecies descritas inicialmente en sistemas montañosos o islas han sido ahora reconocidas como especies. Los vertebrados más populares socialmente, los grandes mamíferos o las aves, sobre los que más recursos de investigación, en planes de recuperación y de mejora de su hábitat se dedican, sin embargo son los que presentan una condición negativa menos acuciante, salvo excepciones. Dada además su gran movilidad son Clases con un bajo nivel de endemicidad en la península Ibérica. Otros menos populares, como los herpetos, presentan un grado de amenaza más elevado siendo en muchos de los casos especies endémicas del territorio peninsular o insular. -
Aphanius Fasciatus
MARINE ECOLOGY PROGRESS SERIES Vol. 179: 155-162.1999 Published April 15 Mar Ecol Prog Ser Genetic divergence in natural populations of the Mediterranean brackish-water killifish Aphanius fasciatus Ferruccio Maltagliati* Dipartimento di Scienze dell'uomo e dellrAmbiente.Universita di Pisa, Via Volta 6, 1-56126 Pisa, Italy ABSTRACT: Samples of the brackish-water cyprinodontid fish Aphanius fasciatus from 11 Medter- ranean coastal brackish-water habitats were examined for variation at 43 allozyme loci. Sixteen loci were polymorphic in at least 1 population. Estimates of genetic variability revealed low levels of poly- morphism, with mean effective number of alleles per locus ranging from 1.02 (SE 0.01) to 1.10 (SE 0.04) and average expected heterozygosity values from 0.013 (SE 0.007) to 0.062 (SE 0.022). The mean Weir & Cockerham f = 0.060 (SE 0.019) confirmed the general concordance with Hardy-Weinberg equilib- rium within populations assessed by exact tests. The presence of various private alleles and the mean value of the coancestry coefficient, 0- 0.507 (SE 0.078),indicated a marked genetic dvergence among populations. Nei's genetic distance values were characteristic of populations within species, ranging from 0.001 (SE 0.000) to 0.098 (SE 0.044). Genetic affinities obtained by UPGMA cluster analysis were consistent with the geographical distribution of populations. The hgh degree of genetic divergence among A. fasciatus populations corresponds to the naturally fragmented distribution of the species and to restricted gene flow between populations, due to the limited dispersal potential of the species. Fur- thermore, genetic and geographical distances between populations are consistent with the prediction that the species is genetically structured by isolation by distance. -
Fisheries and Biodiversity
First section Fisheries and biodiversity Photo from MiPAAF archive Chapter 2 Ecological aspects Italian seas and the subdivision of the Mediterranean Sea in GSA Considerations on data collection for the evaluation of living resources and the monitoring of fisheries on the fleets that operate in the Mediterranean Sea determined the subdivision of the latter in a series of reference areas for both management activities and scientific surveys. Such areas represent a compromise among legislative, geographic and environmental aspects. The Mediterranean Sea was subdivided in 30 sub-areas, named GSA (Geographic Sub Areas). The term “sub” refers to the fact that the Mediterranean Sea is one of the 60 Large Marine Ecosystems on the planet. Geographical Sub-Areas in the GFCM area were established amending the Resolution GFCM/31/2007/2, on the advise of the GFCM Scientific Advisory Committee (SAC). The 30 areas largely differ in size and characteristics. The geographic division of fisheries areas in the Mediterranean Sea is still evolving and is subject to periodical improvement by SAC. 1 Northern Alboran Sea 11.2 Sardinia (east) 22 Aegean Sea 2 Alboran Island 12 Northern Tunisia 23 Crete Island 3 Southern Alboran Sea 13 Gulf of Hammamet 24 North Levant 4 Algeria 14 Gulf of Gabes 25 Cyprus Island 5 Balearic Island 15 Malta Island 26 South Levant 6 Northern Spain 16 South of Sicily 27 Levant 7 Gulf of Lions 17 Northern Adriatic 28 Marmara Sea 8 Corsica Island 18 Southern Adriatic Sea 29 Black Sea 9 Ligurian and North Tyrrhenian Sea 19 Western Ionian Sea 30 Azov Sea 10 South Tyrrhenian Sea 20 Eastern Ionian Sea 11.1 Sardinia (west) 21 Southern Ionian Sea 17 2.1 Environmental characterisation of fishing areas 2.1.1 GSA 9 - Ligurian and Northern Tyrrhenian Seas Relini G., Sartor P., Reale B., Orsi Relini L., Mannini A., De Ranieri S., Ardizzone G.D., Belluscio A., Serena F. -
Assessing the Species in the CARES Preservation Program and the Role of Aquarium Hobbyists in Freshwater Fish Conservation
fishes Article Assessing the Species in the CARES Preservation Program and the Role of Aquarium Hobbyists in Freshwater Fish Conservation Jose W. Valdez 1 and Kapil Mandrekar 2,* 1 Department of Bioscience—Biodiversity and Conservation, Aarhus University, Grenåvej 14, 8410 Rønde, Denmark; [email protected] 2 Department of Environmental and Forest Biology, SUNY College of Environmental Science and Forestry, 1 Forestry Drive, Syracuse, NY 13210, USA * Correspondence: [email protected] Received: 30 June 2019; Accepted: 17 September 2019; Published: 29 September 2019 Abstract: Freshwater fish represent half of all fish species and are the most threatened vertebrate group. Given their considerable passion and knowledge, aquarium hobbyists can play a vital role in their conservation. CARES is made up of many organizations, whose purpose is to encourage aquarium hobbyists to devote tank space to the most endangered and overlooked freshwater fish to ensure their survival. We found the CARES priority list contains nearly six hundred species from twenty families and two dozen extinct-in-the-wild species. The major families were typically those with the largest hobbyist affiliations such as killifish, livebearers, and cichlids, the latter containing half of CARES species. CARES included every IUCN threatened species of Pseudomugilidae and Valenciidae, but only one percent of threatened Characidae, Cobitidae, and Gobiidae species. No Loricariidae in CARES were in the IUCN red list as they have not been scientifically described. Tanzania and Mexico contained the largest amount of species, with the latter containing the most endemics. Many species were classified differently than the IUCN, including a third of extinct-in-the-wild species classified as least concern by the IUCN. -
Cottus Schitsuumsh, a New Species of Sculpin (Scorpaeniformes: Cottidae) in the Columbia River Basin, Idaho-Montana, USA
Zootaxa 3755 (3): 241–258 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3755.3.3 http://zoobank.org/urn:lsid:zoobank.org:pub:5147B3DB-9071-408B-A8D1-B3575ED5806E Cottus schitsuumsh, a new species of sculpin (Scorpaeniformes: Cottidae) in the Columbia River basin, Idaho-Montana, USA MICHAEL LEMOINE1,3, MICHAEL K. YOUNG2, KEVIN S. MCKELVEY2, LISA EBY1, KRISTINE L. PILGRIM2 & MICHAEL K. SCHWARTZ2 1 Wildlife Biology Program, University of Montana, Missoula, Montana 59812, USA 2U.S. Forest Service, Rocky Mountain Research Station, Missoula, Montana 59801, USA 3Corresponding author. E-mail: [email protected] Abstract Fishes of the genus Cottus have long been taxonomically challenging because of morphological similarities among species and their tendency to hybridize, and a number of undescribed species may remain in this genus. We used a combination of genetic and morphological methods to delineate and describe Cottus schitsuumsh, Cedar Sculpin, a new species, from the upper Columbia River basin, Idaho-Montana, USA. Although historically confused with the Shorthead Sculpin (C. confusus), the genetic distance between C. schitsuumsh and C. confusus (4.84–6.29%) suggests these species are distant relatives. Moreover, the two species can be differentiated on the basis of lateral-line pores on the caudal peduncle, head width, and interpelvic width. Cottus schitsuumsh is also distinct from all other Cottus in this region in having a single small, skin-covered, preopercular spine. Haplotypes of mtDNA cytochrome oxidase c subunit 1 of C. schitsuumsh differed from all other members of the genus at three positions, had interspecific genetic distances typical for congeneric fishes (1.61–2.74% to nearest neighbors), and were monophyletic in maximum-likelihood trees.