Plant Biology ISSN 1435-8603 RESEARCH PAPER Phylogeography of Chinese cherry (Prunus pseudocerasus Lindl.) inferred from chloroplast and nuclear DNA: insights into evolutionary patterns and demographic history T. Chen1, Q. Chen1, Y. Luo1, Z.-L. Huang1, J. Zhang1, H.-R. Tang1,2, D.-M. Pan3 & X.-R. Wang2 1 College of Horticulture, Sichuan Agricultural University, Ya’an, China 2 Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China 3 College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China Keywords ABSTRACT Chinese cherry (Prunus pseudocerasus Lindl.); Prunus pseudocerasus cpDNA; nrDNA; phylogeography. Chinese cherry ( Lindl.) is a commercially valuable fruit crop in China. In order to obtain new insights into its evolutionary history and provide valu- Correspondence able recommendations for resource conservation, phylogeographic patterns of 26 nat- X.-R. Wang, Institute of Pomology and ural populations (305 total individuals) from six geographic regions were analyzed Olericulture, Sichuan Agricultural University, using chloroplast and nuclear DNA fragments. Low levels of haplotype and nucleotide Chengdu 611130, China. diversity were found in these populations, especially in landrace populations. It is E-mail:
[email protected] likely that a combined effect of botanical characteristics impact the effective popula- tion size, such as inbreeding mating system, long life span, as well as vegetative repro- Editor duction. In addition, strong bottleneck effect caused by domestication, together with X. Wang founder effect after dispersal and subsequent demographic expansion, might also accelerate the reduction of the genetic variation in landrace populations. Interestingly, Received: 5 October 2014; Accepted: 10 populations from Longmen Mountain (LMM) and Daliangshan Mountain (DLSM) December 2014 exhibited relatively higher levels of genetic diversity, inferring the two historical genetic diversity centers of the species.