Desorption Electrospray Ionisation
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Multiplatform Investigation of Plasma and Tissue Lipid Signatures of Breast Cancer Using Mass Spectrometry Tools
International Journal of Molecular Sciences Article Multiplatform Investigation of Plasma and Tissue Lipid Signatures of Breast Cancer Using Mass Spectrometry Tools 1, 2, 2 3 Alex Ap. Rosini Silva y, Marcella R. Cardoso y , Luciana Montes Rezende , John Q. Lin , Fernando Guimaraes 2 , Geisilene R. Paiva Silva 4, Michael Murgu 5, Denise Gonçalves Priolli 1, Marcos N. Eberlin 6, Alessandra Tata 7, Livia S. Eberlin 3 , Sophie F. M. Derchain 2 and Andreia M. Porcari 1,* 1 Postgraduate Program of Health Sciences, São Francisco University, Bragança Paulista SP 12916-900, Brazil; [email protected] (A.A.R.S.); [email protected] (D.G.P.) 2 Department of Gynecological and Breast Oncology, Women’s Hospital (CAISM), Faculty of Medical Sciences, State University of Campinas (UNICAMP), Campinas SP 13083-881, Brazil; [email protected] (M.R.C.); [email protected] (L.M.R.); [email protected] (F.G.); [email protected] (S.F.M.D.) 3 Department of Chemistry, The University of Texas at Austin, Austin, TX 78712, USA; [email protected] (J.Q.L.); [email protected] (L.S.E.) 4 Laboratory of Molecular and Investigative Pathology—LAPE, Women’s Hospital (CAISM), Faculty of Medical Sciences, State University of Campinas (UNICAMP), Campinas SP 13083-881, Brazil; [email protected] 5 Waters Corporation, São Paulo, SP 13083-970, Brazil; [email protected] 6 School of Engineering, Mackenzie Presbyterian University, São Paulo SP 01302-907, Brazil; [email protected] 7 Laboratorio di Chimica Sperimentale, Istituto Zooprofilattico Sperimentale delle Venezie, Viale Fiume 78, 36100 Vicenza, Italy; [email protected] * Correspondence: [email protected]; Tel.: +55-11-2454-8047 These authors contributed equally to this work. -
Mass Spectrometer Business Presentation Materials
Mass Spectrometer Business Presentation Materials Hiroto Itoi, Corporate Officer Deputy General Manager of the Analytical & Measuring Instruments Division Shimadzu Corporation Jul. 3, 2018 Contents I. Introduction • Expansion of Mass Spectrometry ………………………………………………………………… p.3 • History of Shimadzu's Growth in Mass Spectrometry …………………………………………… p.5 II. Overview of Mass Spectrometers • Operating Principle, Demand Trends, and Vendors ……………………………………………… p.9 • Mass Spectra ………………………………………………………………………………………… p.10 • Configuration of Mass Spectrometers …………………………………………………………… p.11 • Ionization …………………………………………………………………………………………… p.12 • Mass Separation …………………………………………………………………………………… p.14 III. Shimadzu's Mass Spectrometer Business • Product Type ………………………………………………………………………………………… p.17 • Application Software ………………………………………………………………………………… p.18 • Growth Strategy for Mass Spectrometer Business ……………………………………………… p.19 • Expand/Improve Product Lines …………………………………………………………………… p.20 • Measures to Expand Application Fields …………………………………………………………… p.24 • Measures to Automate Data Processing Using AI ……………………………………………… p.25 IV. Summary • Future Direction ……………………………………………………………………………………… p.26 July 2018 Mass Spectrometer Business Presentation Materials 2 I. Introduction Expansion of Mass Spectrometry (1) Why Mass Spectrometry? Mass spectrometry is able to analyze a wide variety of compounds with high accuracy and high efficiency (simultaneous multicomponent analysis). It offers superior characteristics that are especially beneficial in the following fields, -
Contents • Introduction to Proteomics and Mass Spectrometry
Contents • Introduction to Proteomics and Mass spectrometry - What we need to know in our quest to explain life - Fundamental things you need to know about mass spectrometry • Interfaces and ion sources - Electrospray ionization (ESI) - conventional and nanospray - Heated nebulizer atmospheric pressure chemical ionization - Matrix assisted laser desorption • Types of MS analyzers - Magnetic sector - Quadrupole - Time-of-flight - Hybrid - Ion trap In the next step in our quest to explain what is life The human genome project has largely been completed and many other genomes are surrendering to the gene sequencers. However, all this knowledge does not give us the information that is needed to explain how living cells work. To do that, we need to study proteins. In 2002, mass spectrometry has developed to the point where it has the capacity to obtain the "exact" molecular weight of many macromolecules. At the present time, this includes proteins up to 150,000 Da. Proteins of higher molecular weights (up to 500,000 Da) can also be studied by mass spectrometry, but with less accuracy. The paradigm for sequencing of peptides and identification of proteins has changed – because of the availability of the human genome database, peptides can be identified merely by their masses or by partial sequence information, often in minutes, not hours. This new capacity is shifting the emphasis of biomedical research back to the functional aspects of cell biochemistry, the expression of particular sets of genes and their gene products, the proteins of the cell. These are the new goals of the biological scientist: o to know which proteins are expressed in each cell, preferably one cell at a time o to know how these proteins are modified, information that cannot necessarily be deduced from the nucleotide sequence of individual genes. -
Modern Mass Spectrometry
Modern Mass Spectrometry MacMillan Group Meeting 2005 Sandra Lee Key References: E. Uggerud, S. Petrie, D. K. Bohme, F. Turecek, D. Schröder, H. Schwarz, D. Plattner, T. Wyttenbach, M. T. Bowers, P. B. Armentrout, S. A. Truger, T. Junker, G. Suizdak, Mark Brönstrup. Topics in Current Chemistry: Modern Mass Spectroscopy, pp. 1-302, 225. Springer-Verlag, Berlin, 2003. Current Topics in Organic Chemistry 2003, 15, 1503-1624 1 The Basics of Mass Spectroscopy ! Purpose Mass spectrometers use the difference in mass-to-charge ratio (m/z) of ionized atoms or molecules to separate them. Therefore, mass spectroscopy allows quantitation of atoms or molecules and provides structural information by the identification of distinctive fragmentation patterns. The general operation of a mass spectrometer is: "1. " create gas-phase ions "2. " separate the ions in space or time based on their mass-to-charge ratio "3. " measure the quantity of ions of each mass-to-charge ratio Ionization sources ! Instrumentation Chemical Ionisation (CI) Atmospheric Pressure CI!(APCI) Electron Impact!(EI) Electrospray Ionization!(ESI) SORTING DETECTION IONIZATION OF IONS OF IONS Fast Atom Bombardment (FAB) Field Desorption/Field Ionisation (FD/FI) Matrix Assisted Laser Desorption gaseous mass ion Ionisation!(MALDI) ion source analyzer transducer Thermospray Ionisation (TI) Analyzers quadrupoles vacuum signal Time-of-Flight (TOF) pump processor magnetic sectors 10-5– 10-8 torr Fourier transform and quadrupole ion traps inlet Detectors mass electron multiplier spectrum Faraday cup Ionization Sources: Classical Methods ! Electron Impact Ionization A beam of electrons passes through a gas-phase sample and collides with neutral analyte molcules (M) to produce a positively charged ion or a fragment ion. -
Portable Mass Spectrometry
Food Analytical Methods https://doi.org/10.1007/s12161-019-01666-6 Potential of Recent Ambient Ionization Techniques for Future Food Contaminant Analysis Using (Trans)Portable Mass Spectrometry Marco H. Blokland1 & Arjen Gerssen1 & Paul W. Zoontjes1 & Janusz Pawliszyn2 & Michel W.F. Nielen1,3 Received: 3 June 2019 /Accepted: 31 October 2019 # The Author(s) 2019 Abstract In food analysis, a trend towards on-site testing of quality and safety parameters is emerging. So far, on-site testing has been mainly explored by miniaturized optical spectroscopy and ligand-binding assay approaches such as lateral flow immunoassays and biosensors. However, for the analysis of multiple parameters at regulatory levels, mass spectrometry (MS) is the method of choice in food testing laboratories. Thanks to recent developments in ambient ionization and upcoming miniaturization of mass analyzers, (trans)portable mass spectrometry may be added to the toolkit for on-site testing and eventually compete with multiplex immunoassays in mixture analysis. In this study, we preliminary evaluated a selection of recent ambient ionization techniques for their potential in simplified testing of selected food contaminants such as pesticides, veterinary drugs, and natural toxins, aiming for a minimum in sample preparation while maintaining acceptable sensitivity and robustness. Matrix-assisted inlet ionization (MAI), handheld desorption atmospheric pressure chemical ionization (DAPCI), transmission-mode direct analysis in real time (TM-DART), and coated blade spray (CBS) were coupled to both benchtop Orbitrap and compact quad- rupole single-stage mass analyzers, while CBS was also briefly studied on a benchtop triple-quadrupole MS. From the results, it can be concluded that for solid and liquid sample transmission configurations provide the highest sensitivity while upon addition ofastationaryphase,suchasinCBS,evenlowμg/L levels in urine samples can be achieved provided the additional selectivity of tandem mass spectrometry is exploited. -
Methods of Ion Generation
Chem. Rev. 2001, 101, 361−375 361 Methods of Ion Generation Marvin L. Vestal PE Biosystems, Framingham, Massachusetts 01701 Received May 24, 2000 Contents I. Introduction 361 II. Atomic Ions 362 A. Thermal Ionization 362 B. Spark Source 362 C. Plasma Sources 362 D. Glow Discharge 362 E. Inductively Coupled Plasma (ICP) 363 III. Molecular Ions from Volatile Samples. 364 A. Electron Ionization (EI) 364 B. Chemical Ionization (CI) 365 C. Photoionization (PI) 367 D. Field Ionization (FI) 367 IV. Molecular Ions from Nonvolatile Samples 367 Marvin L. Vestal received his B.S. and M.S. degrees, 1958 and 1960, A. Spray Techniques 367 respectively, in Engineering Sciences from Purdue Univesity, Layfayette, IN. In 1975 he received his Ph.D. degree in Chemical Physics from the B. Electrospray 367 University of Utah, Salt Lake City. From 1958 to 1960 he was a Scientist C. Desorption from Surfaces 369 at Johnston Laboratories, Inc., in Layfayette, IN. From 1960 to 1967 he D. High-Energy Particle Impact 369 became Senior Scientist at Johnston Laboratories, Inc., in Baltimore, MD. E. Low-Energy Particle Impact 370 From 1960 to 1962 he was a Graduate Student in the Department of Physics at John Hopkins University. From 1967 to 1970 he was Vice F. Low-Energy Impact with Liquid Surfaces 371 President at Scientific Research Instruments, Corp. in Baltimore, MD. From G. Flow FAB 371 1970 to 1975 he was a Graduate Student and Research Instructor at the H. Laser Ionization−MALDI 371 University of Utah, Salt Lake City. From 1976 to 1981 he became I. -
A Novel High Resolution Accurate Mass Orbitrap-Based GC-MS
ROUTINE OR RESEARCH GC-Orbitrap for Environmental Analysis a collaboration between ROUTINE OR RESEARCH GC-Orbitrap for Environmental Analysis Foreword A Novel High Resolution Accurate Mass Orbitrap-based GC-MS Platform for Routine Analysis of Short Chained Chlorinated Paraffins In this study, the performance of a novel bench top, high resolution accurate mass Orbitrap™-based GC-MS was tested for the analysis of SCCPs. System performance was tested using full-scan acquisition and simple instrumental setup. Pyrolysis-GC-Orbitrap MS - A Powerful Analytical Tool for Identification and Quantification of Microplastics in a Biological Matrix The purpose of the experiments described in this work was to assess the applicability of pyrolysis-gas chromatography-Orbitrap™ mass spectrometry for the qualitative and quantitative analysis of plastic polymers in complex biological matrices. Low Level Quantification of NDMA and Non-targeted Contaminants Screening in Drinking Water using GC Orbitrap Mass Spectrometry In this work, a sensitive and selective method for NDMA detection and quantification using high resolution accurate mass GC Orbitrap™ technology is described. Overcoming Analytical Challenges for Polybrominated Diphenyl Ethers (PBDEs) Analysis in Environmental Samples using Gas Chromatography – Orbitrap Mass Spectrometry The note demonstrates the quantitative performance of the Thermo Scientific™ Exactive™ GC Orbitrap™ GC-MS mass spectrometer for the analysis of polybrominated diphenyl ethers (PBDEs) in environmental samples. Versatility of GC-Orbitrap Mass Spectrometry for the Ultra-trace Detection of Persistent Organic Pollutants in Penguin Blood from Antarctica In this study, the performance of the Thermo Scientific™ Q Exactive™ GC Orbitrap™ mass spectrometer was evaluated for routine analysis of POPs within King penguin blood from Antarctica. -
1 Introduction of Mass Spectrometry and Ambient Ionization Techniques
1 1 Introduction of Mass Spectrometry and Ambient Ionization Techniques Yiyang Dong, Jiahui Liu, and Tianyang Guo College of Life Science & Technology, Beijing University of Chemical Technology, No. 15 Beisanhuan East Road, Chaoyang District, Beijing, 100029, China 1.1 Evolution of Analytical Chemistry and Its Challenges in the Twenty-First Century The Chemical Revolution began in the eighteenth century, with the work of French chemist Antoine Lavoisier (1743–1794) representing a fundamental watershed that separated the “modern chemistry” era from the “protochemistry” era (Figure 1.1). However, analytical chemistry, a subdiscipline of chemistry, is an ancient science and its metrological tools, basic applications, and analytical processes can be dated back to early recorded history [1]. In chronological spans covering ancient times, the middle ages, the era of the nineteenth century, and the three chemical revolutionary periods, analytical chemistry has successfully evolved from the verge of the nineteenth century to modern and contemporary times, characterized by its versatile traits and unprecedented challenges in the twenty-first century. Historically, analytical chemistry can be termed as the mother of chemistry, as the nature and the composition of materials are always needed to be iden- tified first for specific utilizations subsequently; therefore, the development of analytical chemistry has always been ahead of general chemistry [2]. During pre-Hellenistic times when chemistry did not exist as a science, various ana- lytical processes, for example, qualitative touchstone method and quantitative fire-assay or cupellation scheme have been in existence as routine quality control measures for the purpose of noble goods authentication and anti-counterfeiting practices. Because of the unavailability of archeological clues for origin tracing, the chemical balance and the weights, as stated in the earliest documents ever found, was supposed to have been used only by the Gods [3]. -
Thermospray Mass Spectrometry , a New Technique for Studying The
430 Notizen Thermospray Mass Spectrometry , a New charged droplets. These droplets decompose in a Technique for Studying the Relative Stability heated jet chamber in which a pressure of several of Cluster Ions of Salts mbar is maintained, and desolvated ions enter the mass analyser via a small orifice. Typically quadru- G. Schmelzeisen-Redeker, S. S. Wong, pole mass filters are employed. For the production U. Giessmann, and F. W. Röllgen of salt cluster ions the temperatures of the jet and in Institut für Physikalische Chemie der Universität Bonn the jet chamber must be high enough to allow the Z. Naturforsch. 40a,430-431 (1985); decomposition of charged small solid particles. For received February 23. 1985 the ammonium halide this condition is easily achieved. Thermospray (TSP) mass spectrometry provides a means of studying stability effects in the frequency distribution of The ammonium chloride cluster ion distribution cluster ions of salts under conditions of heat transfer to the as obtained by the new TSP technique is shown in cluster ions via thermal collisions in a gas. This is demon- strated for the cluster ions of ammonium chloride. The Figure 2. The TSP mass spectrum was obtained TSP mass spectrum is compared with that obtained by with the experimental arrangement described in sputtering of the salt in secondary ion mass spectrometry. [16], A quadrupole mass filter with a mass range 1-420 was utilized. A 0.1 molar aqueous solution of NH C1 was applied. The temperature at the end Cluster ions of salts are easily generated by 4 of the capillary was 250 °C and the temperature of particle impact in secondary ion mass spectrometry the jet chamber was 180 °C. -
Construction of a Versatile High Precision Ambient Ionization Source for Direct Analysis and Imaging
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Construction of a Versatile High Precision Ambient Ionization Source for Direct Analysis and Imaging Jason S. Sampson, Adam M. Hawkridge, and David C. Muddiman W. M. Keck FT-ICR Mass Spectrometry Laboratory, Department of Chemistry, North Carolina State University, Raleigh, North Carolina, USA The design and construction of a high precision ambient ionization source matrix-assisted laser desorption electrospray ionization (MALDESI) are described in full detail, including a complete parts list. The computer controlled high precision motion control system and high repetition rate Explorer laser are demonstrated during MALDESI-FT-ICR analysis of peptides and proteins ranging from 1 to 17 kDa. The high stability ionization source platform described herein demonstrates both the advantages of the new MALDESI source and versatility for application to numerous desorption and ionization techniques. (J Am Soc Mass Spectrom 2008, 19, 1527–1534) © 2008 American Society for Mass Spectrometry he introduction and development of hybridMS/MS am- analysis where peak widths (i.e., analysis bient ionization sources such as laser desorptiontimes) are about 10 to 30 s. Tatmospheric pressure ionization (LDAPI)[1, 2], The advancement and acceptance of MALDESI and fused droplet electrospray ionization/extraction elec-related hybrid ionization techniques are critically de- trospray (FD-ESI, EESI)[3, 4], direct analysis in realpendent on the widespread dissemination of detailed time (DART)[5] , desorption electrospray ionizationsource designs such that results can be reproduced and (DESI) [6], electrospray assisted laser desorption ioniza-improved in a variety of laboratories. -
Ambient Mass Spectrometry for Forensic Analysis
Central Annals of Forensic Research and Analysis Bringing Excellence in Open Access Review Article *Corresponding author Huanwen Chen, Department of Applied Chemistry, East China Institute of Technology, 56 Xuefu Road, Fuzhou Ambient Mass Spectrometry for 344000, China, Submitted: 13 February 2015 Forensic Analysis Accepted: 10 August 2015 Published: 03 October 2015 1 2 1 1 2 Lijun Xie , Huian Zhao , Peng Zhou , Tenggao Zhu , Yongzi Liu ISSN: 2378-9476 and Huanwen Chen1* Copyright 1Department of Chemistry, East China Institute of Technology, China © 2015 Chen et al. 2Jiangxi Institute of Forensic Science, Nanchang, China OPEN ACCESS Abstract Keywords • Ambient ionization Ambient mass spectrometry has emerged as a significant tool to facilitate forensic • Mass spectrometry investigation considering its well-known advantages of rapid, direct, nondestructive, • Forensic analysis high-throughput detection of a broad range of raw samples, as well as its potential capability of miniaturization and automation. New mass spectrometry technologies include more versatile ionization sources, allowing the next generation of instrumentation to be more multipurpose and adaptable to the needs of the discipline. This review assesses and highlights forensic applications of ambient mass spectrometry. In addition, the instrumentation and principles of some popular and promising ambient ionization techniques are summarized. INTRODUCTION procedures. Forensic science has been developed in the twentieth century maintaining sampleThese integritydrawbacks and maketraceability. it difficult to analyze and came to be recognized by the courts and law enforcement. forensic with high efficiency and effectively, leaving problems in Forensic analysis and investigation capabilities are vital in criminal and civil cases, national security, environmental allows for direct and rapid analysis of raw sample in their native Recently, ambient mass spectrometry (ambient MS), which illicit drugs and counterfeiting of legitimate pharmaceuticals, new in sample preparation, has aroused blooming interest. -
Two New Devices for Identifying Electrochemical Reaction
Article pubs.acs.org/ac Two New Devices for Identifying Electrochemical Reaction Intermediates with Desorption Electrospray Ionization Mass Spectrometry † ‡ † † Heyong Cheng, , Xin Yan, and Richard N. Zare*, † Department of Chemistry, Stanford University, Stanford, California 94305-5080, United States ‡ College of Material Chemistry and Chemical Engineering, Hangzhou Normal University, Hangzhou, 310036, China *S Supporting Information ABSTRACT: Desorption electrospray ionization mass spectrometry (DESI- MS) previously has been used to capture and identify transient intermediates in electrochemical redox reactions on a platinum-covered rotating waterwheel. We present here two different setups that use a flat surface with porous carbon tape as the working electrode, where analyte-containing microdroplets from the DESI probe contacted with electrolyte supplied onto the surface. One setup had the conducting carbon tape in the form of a grooved inclined plane; the other one was in the form of a flat plane that had the conducting carbon tape as its front surface. Both these setups, which were relatively robust and easy to operate, overcame interference from the electrospray sheath gas that disturbs and dries the flowing electrolyte. By using the inclined-plane device, we observed radical cations and dimer species generated in the electrochemical oxidation of triphenylamine, diimine and imine alcohol in the electrochemical oxidation of uric acid, and the reductive cleavage of disulfide bonds in glutathione disulfide. By using the device with the flat carbon tape, we detected nitrenium ions generated in the electrochemical oxidation of N,N′-dimethyoxydiphenylamine and di-p-tolylamine. Our experience suggests that the flat porous carbon tape surface might be preferable over the inclined plane because of its ease of setup.