An Indexing Theory for Working Memory Based on Fast Hebbian Plasticity
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Spike-Based Bayesian-Hebbian Learning in Cortical and Subcortical Microcircuits
Spike-Based Bayesian-Hebbian Learning in Cortical and Subcortical Microcircuits PHILIP J. TULLY Doctoral Thesis Stockholm, Sweden 2017 TRITA-CSC-A-2017:11 ISSN 1653-5723 KTH School of Computer Science and Communication ISRN-KTH/CSC/A-17/11-SE SE-100 44 Stockholm ISBN 978-91-7729-351-4 SWEDEN Akademisk avhandling som med tillstånd av Kungl Tekniska högskolan framläg- ges till offentlig granskning för avläggande av teknologie doktorsexamen i datalogi tisdagen den 9 maj 2017 klockan 13.00 i F3, Lindstedtsvägen 26, Kungl Tekniska högskolan, Valhallavägen 79, Stockholm. © Philip J. Tully, May 2017 Tryck: Universitetsservice US AB iii Abstract Cortical and subcortical microcircuits are continuously modified throughout life. Despite ongoing changes these networks stubbornly maintain their functions, which persist although destabilizing synaptic and nonsynaptic mechanisms should osten- sibly propel them towards runaway excitation or quiescence. What dynamical phe- nomena exist to act together to balance such learning with information processing? What types of activity patterns do they underpin, and how do these patterns relate to our perceptual experiences? What enables learning and memory operations to occur despite such massive and constant neural reorganization? Progress towards answering many of these questions can be pursued through large- scale neuronal simulations. Inspiring some of the most seminal neuroscience exper- iments, theoretical models provide insights that demystify experimental measure- ments and even inform new experiments. In this thesis, a Hebbian learning rule for spiking neurons inspired by statistical inference is introduced. The spike-based version of the Bayesian Confidence Propagation Neural Network (BCPNN) learning rule involves changes in both synaptic strengths and intrinsic neuronal currents. -
Time-Frequency Based Phase-Amplitude Coupling
www.nature.com/scientificreports OPEN Time-Frequency Based Phase- Amplitude Coupling Measure For Neuronal Oscillations Received: 17 September 2018 Tamanna T. K. Munia & Selin Aviyente Accepted: 9 August 2019 Oscillatory activity in the brain has been associated with a wide variety of cognitive processes including Published: xx xx xxxx decision making, feedback processing, and working memory. The high temporal resolution provided by electroencephalography (EEG) enables the study of variation of oscillatory power and coupling across time. Various forms of neural synchrony across frequency bands have been suggested as the mechanism underlying neural binding. Recently, a considerable amount of work has focused on phase- amplitude coupling (PAC)– a form of cross-frequency coupling where the amplitude of a high frequency signal is modulated by the phase of low frequency oscillations. The existing methods for assessing PAC have some limitations including limited frequency resolution and sensitivity to noise, data length and sampling rate due to the inherent dependence on bandpass fltering. In this paper, we propose a new time-frequency based PAC (t-f PAC) measure that can address these issues. The proposed method relies on a complex time-frequency distribution, known as the Reduced Interference Distribution (RID)-Rihaczek distribution, to estimate both the phase and the envelope of low and high frequency oscillations, respectively. As such, it does not rely on bandpass fltering and possesses some of the desirable properties of time-frequency distributions such as high frequency resolution. The proposed technique is frst evaluated for simulated data and then applied to an EEG speeded reaction task dataset. The results illustrate that the proposed time-frequency based PAC is more robust to varying signal parameters and provides a more accurate measure of coupling strength. -
The Scarab 2010
THE SCARAB 2010 28th Edition Oklahoma City University 2 THE SCARAB 2010 28th Edition Oklahoma City University’s Presented by Annual Anthology of Prose, Sigma Tau Delta, Poetry, and Artwork Omega Phi Chapter Editors: Ali Cardaropoli, Kenneth Kimbrough, Emma Johnson, Jake Miller, and Shana Barrett Dr. Terry Phelps, Sponsor Copyright © The Scarab 2010 All rights reserved 3 The Scarab is published annually by the Oklahoma City University chapter of Sigma Tau Delta, the International English Honor Society. Opinions and beliefs expressed herein do not necessarily reflect those of the university, the chapter, or the editors. Submissions are accepted from students, faculty, staff, and alumni. Address all correspondence to The Scarab c/o Dr. Terry Phelps, 2501 N. Blackwelder, Oklahoma City, OK 73106, or e-mail [email protected]. The Scarab is not responsible for returning submitted work. All submissions are subject to editing. 4 THE SCARAB 2010 POETRY NONFICTION We Hold These Truths By Neilee Wood by Spencer Hicks ................................. 8 Fruition ...................................................... 41 It‘s Too Early ............................................ 42 September 1990 Skin ........................................................... 42 by Sheray Franklin .............................. 10 By Abigail Keegan Fearless with Baron Birding ...................................................... 43 by Terre Cooke-Chaffin ........................ 12 By Daniel Correa Inevitable Ode to FDR .............................................. -
Modeling Prediction and Pattern Recognition in the Early Visual and Olfactory Systems
Modeling prediction and pattern recognition in the early visual and olfactory systems BERNHARD A. KAPLAN Doctoral Thesis Stockholm, Sweden 2015 TRITA-CSC-A-2015:10 ISSN-1653-5723 KTH School of Computer Science and Communication ISRN KTH/CSC/A-15/10-SE SE-100 44 Stockholm ISBN 978-91-7595-532-2 SWEDEN Akademisk avhandling som med tillstånd av Kungl Tekniska högskolan fram- lägges till offentlig granskning för avläggande av Doctoral Thesis in Computer Science onsdag 27:e maj 2015 klockan 10.00 i F3, Lindstedtsvägen 26, Kungl Tekniska högskolan, Stockholm. © Bernhard A. Kaplan, April 2015 Tryck: Universitetsservice US AB iii Abstract Our senses are our mind’s window to the outside world and deter- mine how we perceive our environment. Sensory systems are complex multi-level systems that have to solve a multitude of tasks that allow us to understand our surroundings. However, questions on various lev- els and scales remain to be answered ranging from low-level neural responses to behavioral functions on the highest level. Modeling can connect different scales and contribute towards tackling these questions by giving insights into perceptual processes and interactions between processing stages. In this thesis, numerical simulations of spiking neural networks are used to deal with two essential functions that sensory systems have to solve: pattern recognition and prediction. The focus of this thesis lies on the question as to how neural network connectivity can be used in order to achieve these crucial functions. The guiding ideas of the models presented here are grounded in the probabilistic interpretation of neural signals, Hebbian learning principles and connectionist ideas. -
Jarosek Copy.Fm
Cybernetics and Human Knowing. Vol. 27 (2020), no. 3, pp. 33–63 Knowing How to Be: Imitation, the Neglected Axiom Stephen Laszlo Jarosek1 The concept of imitation has been around for a very long time, and many conversations have been had about it, from Plato and Aristotle to Piaget and Freud. Yet despite this pervasive acknowledgement of its relevance in areas as diverse as memetics, culture, child development and language, there exists little appreciation of its relevance as a fundamental principle in the semiotic and life sciences. Reframing imitation in the context of knowing how to be, within the framework of semiotic theory, can change this, thus providing an interpretation of paradigmatic significance. However, given the difficulty of establishing imitation as a fundamental principle after all these centuries since Plato, I turn the question around and approach it from a different angle. If imitation is to be incorporated into semiotic theory and the Peircean categories as axiomatic, then what pathologies manifest when imitation is disabled or compromised? I begin by reviewing the reasons for regarding imitation as a fundamental principle. I then review the evidence with respect to autism and schizophrenia as imitation deficit. I am thus able to consolidate my position that imitation and knowing how to be are integral to agency and pragmatism (semiotic theory), and should be embraced within an axiomatic framework for the semiotic and life sciences. Keywords: autism; biosemiotics; imitation; neural plasticity; Peirce; pragmatism The concept of imitation has been around for a very long time, and many conversations have been had about it, from Plato and Aristotle to Piaget and Freud. -
Wikipedia.Org/W/Index.Php?Title=Neural Oscillation&Oldid=898604092"
Neural oscillation Neural oscillations, or brainwaves, are rhythmic or repetitive patterns of neural activity in the central nervous system. Neural tissue can generate oscillatory activity in many ways, driven either by mechanisms within individual neurons or by interactions between neurons. In individual neurons, oscillations can appear either as oscillations in membrane potential or as rhythmic patterns of action potentials, which then produce oscillatory activation of post-synaptic neurons. At the level of neural ensembles, synchronized activity of large numbers of neurons can give rise to macroscopic oscillations, which can be observed in an electroencephalogram. Oscillatory activity in groups of neurons generally arises from feedback connections between the neurons that result in the synchronization of their firing patterns. The interaction between neurons can give rise to oscillations at a different frequency than the firing frequency of individual neurons. A well-known example of macroscopic neural oscillations is alpha activity. Neural oscillations were observed by researchers as early as 1924 (by Hans Berger). More than 50 years later, intrinsic oscillatory behavior was encountered in vertebrate neurons, but its functional role is still not fully understood.[1] The possible roles of neural oscillations include feature binding, information transfer mechanisms and the generation of rhythmic motor output. Over the last decades more insight has been gained, especially with advances in brain imaging. A major area of research in neuroscience involves determining how oscillations are generated and what their roles are. Oscillatory activity in the brain is widely observed at different levels of organization and is thought to play a key role in processing neural information. -
Structured Sequence Processing and Combinatorial Binding: Neurobiologically Royalsocietypublishing.Org/Journal/Rstb and Computationally Informed Hypotheses
Structured sequence processing and combinatorial binding: neurobiologically royalsocietypublishing.org/journal/rstb and computationally informed hypotheses Ryan Calmus, Benjamin Wilson, Yukiko Kikuchi and Christopher I. Petkov Review Newcastle University Medical School, Framlington Place, Newcastle upon Tyne, UK RC, 0000-0002-7826-9355; BW, 0000-0003-2043-7771; YK, 0000-0002-0365-0397; Cite this article: Calmus R, Wilson B, Kikuchi CIP, 0000-0002-4932-7907 Y, Petkov CI. 2019 Structured sequence processing and combinatorial binding: Understanding how the brain forms representations of structured information distributed in time is a challenging endeavour for the neuroscientific neurobiologically and computationally community, requiring computationally and neurobiologically informed informed hypotheses. Phil. Trans. R. Soc. B approaches. The neural mechanisms for segmenting continuous streams of sen- 375: 20190304. sory input and establishing representations of dependencies remain largely http://dx.doi.org/10.1098/rstb.2019.0304 unknown, as do the transformations and computations occurring between the brain regions involved in these aspects of sequence processing. We propose a blueprint for a neurobiologically informed and informing computational Accepted: 4 November 2019 model of sequence processing (entitled: Vector-symbolic Sequencing of Binding INstantiating Dependencies, or VS-BIND). This model is designed to support One contribution of 16 to a theme issue the transformation of serially ordered elements in sensory sequences into struc- ‘Towards mechanistic models of meaning tured representations of bound dependencies, readily operates on multiple composition’. timescales, and encodes or decodes sequences with respect to chunked items wherever dependencies occur in time. The model integrates established vector symbolic additive and conjunctive binding operators with neurobiologically Subject Areas: plausible oscillatory dynamics, and is compatible with modern spiking neural neuroscience, cognition, computational biology network simulation methods. -
Effects of Transcranial Magnetic Stimulation Therapy on Evoked And
brain sciences Article Effects of Transcranial Magnetic Stimulation Therapy on Evoked and Induced Gamma Oscillations in Children with Autism Spectrum Disorder Manuel F. Casanova 1,2, Mohamed Shaban 3, Mohammed Ghazal 4 , Ayman S. El-Baz 5, Emily L. Casanova 1, Ioan Opris 6 and Estate M. Sokhadze 1,2,* 1 Department of Biomedical Sciences, University of South Carolina School of Medicine-Greenville, 701 Grove Rd., Greenville, SC 29605, USA; [email protected] (M.F.C.); [email protected] (E.L.C.) 2 Department of Psychiatry & Behavioral Sciences, University of Louisville, 401 E Chestnut Str., #600, Louisville, KY 40202, USA 3 Department of Electrical and Computer Engineering, University of South Alabama, Mobile, AL 36688, USA; [email protected] 4 BioImaging Research Lab, Electrical and Computer Engineering Abu Dhabi University, Abu Dhabi 59911, UAE; [email protected] 5 Department of Bioengineering, University of Louisville, Louisville, KY 40202, USA; [email protected] 6 School of Medicine, University of Miami, Miami, FL 33136, USA; [email protected] * Correspondence: [email protected]; Tel.: +1-(502)-294-6522 Received: 30 May 2020; Accepted: 30 June 2020; Published: 3 July 2020 Abstract: Autism spectrum disorder (ASD) is a behaviorally diagnosed neurodevelopmental condition of unknown pathology. Research suggests that abnormalities of elecltroencephalogram (EEG) gamma oscillations may provide a biomarker of the condition. In this study, envelope analysis of demodulated waveforms for evoked and induced gamma oscillations in response to Kanizsa figures in an oddball task were analyzed and compared in 19 ASD and 19 age/gender-matched neurotypical children. The ASD group was treated with low frequency transcranial magnetic stimulation (TMS), (1.0 Hz, 90% motor threshold, 18 weekly sessions) targeting the dorsolateral prefrontal cortex. -
Fast Hebbian Plasticity Explains Working Memory and Neural Binding
bioRxiv preprint doi: https://doi.org/10.1101/334821; this version posted May 30, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Fast Hebbian Plasticity explains Working Memory and Neural Binding Florian Fiebig1, Pawel Herman1, and Anders Lansner1,2 1 Lansner Laboratory, Department of Computational Science and Technology, Royal Institute of Technology, 10044 Stockholm, Sweden, 2 Department of Mathematics, Stockholm University, 10691 Stockholm, Sweden Abstract We have extended a previous spiking neural network model of prefrontal cortex with fast Hebbian plasticity to also include interactions between short-term and long-term memory stores. We investigated how prefrontal cortex could bind and maintain multi-modal long-term memory representations by simulating three cortical patches in macaque brain, i.e. in prefrontal cortex together with visual and auditory temporal cortex. Our simulation results demonstrate how simultaneous brief multi-modal activation of items in long- term memory could build a temporary joint cell assembly linked via prefrontal cortex. The latter can then activate spontaneously and thereby reactivate the associated long-term representations. Cueing one long-term memory item rapidly pattern completes the associated un-cued item via prefrontal cortex. The short-term memory network flexibly updates as new stimuli arrive thereby gradually over- writing older representation. In a wider context, this working memory model suggests a novel solution to the “binding problem”, a long-standing and fundamental issue in cognitive neuroscience. -
Large-Scale Simulations of Plastic Neural Networks on Neuromorphic Hardware
ORIGINAL RESEARCH published: 07 April 2016 doi: 10.3389/fnana.2016.00037 Large-Scale Simulations of Plastic Neural Networks on Neuromorphic Hardware James C. Knight 1*, Philip J. Tully 2, 3, 4, Bernhard A. Kaplan 5, Anders Lansner 2, 3, 6 and Steve B. Furber 1 1 Advanced Processor Technologies Group, School of Computer Science, University of Manchester, Manchester, UK, 2 Department of Computational Biology, Royal Institute of Technology, Stockholm, Sweden, 3 Stockholm Brain Institute, Karolinska Institute, Stockholm, Sweden, 4 Institute for Adaptive and Neural Computation, School of Informatics, University of Edinburgh, Edinburgh, UK, 5 Department of Visualization and Data Analysis, Zuse Institute Berlin, Berlin, Germany, 6 Department of Numerical analysis and Computer Science, Stockholm University, Stockholm, Sweden SpiNNaker is a digital, neuromorphic architecture designed for simulating large-scale spiking neural networks at speeds close to biological real-time. Rather than using bespoke analog or digital hardware, the basic computational unit of a SpiNNaker system is a general-purpose ARM processor, allowing it to be programmed to simulate a wide variety of neuron and synapse models. This flexibility is particularly valuable in the study of Edited by: biological plasticity phenomena. A recently proposed learning rule based on the Bayesian Wolfram Schenck, University of Applied Sciences Confidence Propagation Neural Network (BCPNN) paradigm offers a generic framework Bielefeld, Germany for modeling the interaction of different plasticity mechanisms using spiking neurons. Reviewed by: However, it can be computationally expensive to simulate large networks with BCPNN Guy Elston, learning since it requires multiple state variables for each synapse, each of which needs Centre for Cognitive Neuroscience, Australia to be updated every simulation time-step. -
Stephen Grossberg
STEPHEN GROSSBERG Wang Professor of Cognitive and Neural Systems Professor of Mathematics, Psychology, and Biomedical Engineering Director, Center for Adaptive Systems Boston University 677 Beacon Street Boston, MA 02215 (617) 353-7857 (617) 353-7755 [email protected] http://cns.bu.edu/~steve HIGH SCHOOL: Stuyvesant High School, Manhattan First in Class of 1957 COLLEGE: Dartmouth College, B.A. First in Class of 1961 A.P. Sloan National Scholar Phi Beta Kappa Prize NSF Undergraduate Research Fellow GRADUATE WORK: Stanford University, M.S., 1961-1964 NSF Graduate Fellowship Woodrow Wilson Graduate Fellowship Rockefeller University, Ph.D., 1964-1967 Rockefeller University Graduate Fellowship POST-GRADUATE ACTIVITIES: 1. Assistant Professor of Applied Mathematics, M.I.T., 1967-1969. 2. Senior Visiting Fellow of the Science Research Council of England, 1969. 3. Norbert Wiener Medal for Cybernetics, 1969. 4. A.P. Sloan Research Fellow, 1969-1971. 5. Associate Professor of Applied Mathematics, M.I.T., 1969-1975. 1 6. Professor of Mathematics, Psychology, and Biomedical Engineering, Boston University, 1975-. 7. Invited lectures in Australia, Austria, Belgium, Bulgaria, Canada, Denmark, England, Finland, France, Germany, Greece, Hong Kong, Israel, Italy, Japan, The Netherlands, Norway, Qatar, Scotland, Singapore, Spain, Sweden, Switzerland, and throughout the United States. 8. Editor of the journals Adaptive Behavior; Applied Intelligence; Behavioral and Brain Sciences (Associate Editor for Computational Neuroscience); Autism Open Access Journal; Behavioural -
Large-Scale Simulations of Plastic Neural Networks on Neuromorphic Hardware
Large-Scale simulations of plastic neural networks on neuromorphic hardware Article (Published Version) Knight, James C, Tully, Philip J, Kaplan, Bernhard A, Lansner, Anders and Furber, Steve B (2016) Large-Scale simulations of plastic neural networks on neuromorphic hardware. Frontiers in Neuroanatomy, 10. a37. ISSN 1662-5129 This version is available from Sussex Research Online: http://sro.sussex.ac.uk/id/eprint/69140/ This document is made available in accordance with publisher policies and may differ from the published version or from the version of record. If you wish to cite this item you are advised to consult the publisher’s version. Please see the URL above for details on accessing the published version. Copyright and reuse: Sussex Research Online is a digital repository of the research output of the University. Copyright and all moral rights to the version of the paper presented here belong to the individual author(s) and/or other copyright owners. To the extent reasonable and practicable, the material made available in SRO has been checked for eligibility before being made available. Copies of full text items generally can be reproduced, displayed or performed and given to third parties in any format or medium for personal research or study, educational, or not-for-profit purposes without prior permission or charge, provided that the authors, title and full bibliographic details are credited, a hyperlink and/or URL is given for the original metadata page and the content is not changed in any way. http://sro.sussex.ac.uk ORIGINAL RESEARCH published: 07 April 2016 doi: 10.3389/fnana.2016.00037 Large-Scale Simulations of Plastic Neural Networks on Neuromorphic Hardware James C.