SCH 206 Course Outline Aldehydes and Ketones; Carboxylic Acids; Carboxylic Acids Derivatives;
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Products from Reactions of Carbon Nucleophiles and Carbon
14C synthesis strategies, Chem 315/316 / Beauchamp 1 Products from reactions of carbon nucleophiles and carbon electrophiles used in the 14C Game and our course: Carbon and hydrogen nucleophiles Ph R Ph Al H N R Li R (MgBr) P Li AlH R Cu Li Na CN RCC Na Ph 4 Li Carbon 2 H C R organolithium organolithium cyanide acetylides 2 ylid Na BH4 diisobutylaluminium lithium diisopropy- electrophiles cuprates (LAH) o reagents reagents Wittig reagents hydride (DIBAH) amide (LDA), -78 C H C Br 3 not useful not useful 2 RX coupling nitrilesalkynes not useful alkyls alkyls not useful methyl RX reaction R Br not useful not useful 2 RX coupling nitriles alkynes not useful alkyls alkyls not useful primary RX reaction R 2 RX coupling nitriles alkyls not useful E2 not useful alkyls not useful not useful reaction R Br secondary RX O 1o ROH 1o ROH 1o ROH 1o ROH not useful 1o ROH o not useful not useful 1o ROH 1 ROH ethylene oxide nitriles alkynes O o o o o o o 2 ROH 2 ROH 2 ROH 2 ROH 2o ROH 2 ROH 2 ROH not useful not useful E2, make nitriles alkynes allylic alcohols propylene oxide O o 3 ROH 3o ROH o 3o ROH o not useful o 3o ROH not useful E2, make 3 ROH 3 ROH 3 ROH allylic alcohols nitriles alkynes isobutylene oxide O o o specific methanol methanol C 1 ROH 1 ROH not used cyanohydrin 1o ROH not useful not useful in our course alkenes H H alkynes methanal O specific o enolate o o cyanohydrin o 1 ROH o C 2 ROH 2 ROH not useful 2 ROH alkenes 1 ROH not useful chemistry R H alkynes simple aldehydes O cyanohydrin o unless specific o enolate C 3 ROH 3o ROH o 2o ROH -
Organic Chemistry
Wisebridge Learning Systems Organic Chemistry Reaction Mechanisms Pocket-Book WLS www.wisebridgelearning.com © 2006 J S Wetzel LEARNING STRATEGIES CONTENTS ● The key to building intuition is to develop the habit ALKANES of asking how each particular mechanism reflects Thermal Cracking - Pyrolysis . 1 general principles. Look for the concepts behind Combustion . 1 the chemistry to make organic chemistry more co- Free Radical Halogenation. 2 herent and rewarding. ALKENES Electrophilic Addition of HX to Alkenes . 3 ● Acid Catalyzed Hydration of Alkenes . 4 Exothermic reactions tend to follow pathways Electrophilic Addition of Halogens to Alkenes . 5 where like charges can separate or where un- Halohydrin Formation . 6 like charges can come together. When reading Free Radical Addition of HX to Alkenes . 7 organic chemistry mechanisms, keep the elec- Catalytic Hydrogenation of Alkenes. 8 tronegativities of the elements and their valence Oxidation of Alkenes to Vicinal Diols. 9 electron configurations always in your mind. Try Oxidative Cleavage of Alkenes . 10 to nterpret electron movement in terms of energy Ozonolysis of Alkenes . 10 Allylic Halogenation . 11 to make the reactions easier to understand and Oxymercuration-Demercuration . 13 remember. Hydroboration of Alkenes . 14 ALKYNES ● For MCAT preparation, pay special attention to Electrophilic Addition of HX to Alkynes . 15 Hydration of Alkynes. 15 reactions where the product hinges on regio- Free Radical Addition of HX to Alkynes . 16 and stereo-selectivity and reactions involving Electrophilic Halogenation of Alkynes. 16 resonant intermediates, which are special favor- Hydroboration of Alkynes . 17 ites of the test-writers. Catalytic Hydrogenation of Alkynes. 17 Reduction of Alkynes with Alkali Metal/Ammonia . 18 Formation and Use of Acetylide Anion Nucleophiles . -
Chapter 7, Haloalkanes, Properties and Substitution Reactions of Haloalkanes Table of Contents 1
Chapter 7, Haloalkanes, Properties and Substitution Reactions of Haloalkanes Table of Contents 1. Alkyl Halides (Haloalkane) 2. Nucleophilic Substitution Reactions (SNX, X=1 or 2) 3. Nucleophiles (Acid-Base Chemistry, pka) 4. Leaving Groups (Acid-Base Chemistry, pka) 5. Kinetics of a Nucleophilic Substitution Reaction: An SN2 Reaction 6. A Mechanism for the SN2 Reaction 7. The Stereochemistry of SN2 Reactions 8. A Mechanism for the SN1 Reaction 9. Carbocations, SN1, E1 10. Stereochemistry of SN1 Reactions 11. Factors Affecting the Rates of SN1 and SN2 Reactions 12. --Eliminations, E1 and E2 13. E2 and E1 mechanisms and product predictions In this chapter we will consider: What groups can be replaced (i.e., substituted) or eliminated The various mechanisms by which such processes occur The conditions that can promote such reactions Alkyl Halides (Haloalkane) An alkyl halide has a halogen atom bonded to an sp3-hybridized (tetrahedral) carbon atom The carbon–chlorine and carbon– bromine bonds are polarized because the halogen is more electronegative than carbon The carbon-iodine bond do not have a per- manent dipole, the bond is easily polarizable Iodine is a good leaving group due to its polarizability, i.e. its ability to stabilize a charge due to its large atomic size Generally, a carbon-halogen bond is polar with a partial positive () charge on the carbon and partial negative () charge on the halogen C X X = Cl, Br, I Different Types of Organic Halides Alkyl halides (haloalkanes) sp3-hybridized Attached to Attached to Attached -
Nucleophilic Aromatic Substitution
NUCLEOPHILIC AROMATIC SUBSTITUTION Ms. Prerana Sanas M.Pharm (Pharmceutical Chemistry) Asst.Professor, NCRD’s Sterling Institute of Pharmacy Nerul Navi Mumbai Nucleophilic aromatic substitution results in the substitution of a halogen X on a benzene ring by a nucleophile (:Nu– ). Aryl halides undergo a limited number of substitution reactions with strong nucleophiles. NAS occurs by two mechanisms i) Bimoleccular displacement (Addition –Elimination) ii) Benzyne Formation( Elimination –Addition) 7/5/2019 Ms.Prerana Sanas 2 Bimolecular displacement (Addition – Elimination) Aryl halides with strong electron-withdrawing groups (such as NO2) on the ortho or para positions react with nucleophiles to afford substitution products. For example, treatment of p-chloronitrobenzene with hydroxide (– OH) affords p-nitrophenol by replacement of Cl by OH. Nucleophilic aromatic substitution occurs with a variety of strong nucleophiles, including – OH, – OR, – NH2, – SR, and in some cases, neutral nucleophiles such as NH3 and RNH2 . 7/5/2019 Ms.Prerana Sanas 3 Mechanism…… The mechanism of these reactions has two steps: Step i) Addition of the nucleophile (:Nu– ) forms a resonance-stabilized carbanion with a new C – Nu bond—three resonance structures can be drawn. • Step [1] is rate-determining since the aromaticity of the benzene ring is lost. In Step ii) loss of the leaving group re-forms the aromatic ring. This step is fast because the aromaticity of the benzene ring is restored. 7/5/2019 Ms.Prerana Sanas 4 Factors affecting Bimolecular displacement Increasing the number of electron-withdrawing groups increases the reactivity of the aryl halide. Electron-withdrawing groups stabilize the intermediate carbanion, and by the Hammond postulate, lower the energy of the transition state that forms it. -
Recent Advances in the Direct Nucleophilic Substitution of Allylic
SHORT REVIEW ▌25 Recentshort review Advances in the Direct Nucleophilic Substitution of Allylic Alcohols through SN1-Type Reactions AlejandroSN1 Reactions of Allylic Alcohols Baeza,* Carmen Nájera* Departamento de Química Orgánica and Instituto de Síntesis Orgánica, University of Alicante, Apdo.99, 03080 Alicante, Spain Fax +34(965)903549; E-mail: [email protected]; E-mail: [email protected] Received: 03.10.2013; Accepted after revision: 06.11.2013 Abstract: Direct nucleophilic substitution reactions of allylic alco- hols are environmentally friendly, since they generate only water as a byproduct, allowing access to new allylic compounds. This reac- tion has, thus, attracted the interest of the chemical community and several strategies have been developed for its successful accom- plishment. This review gathers the latest advances in this methodol- ogy involving SN1-type reactions. 1 Introduction 2SN1-Type Direct Nucleophilic Substitution Reactions of Allylic Alcohols 2.1 Lewis Acids as Catalysts Alejandro Baeza was born in Alicante (Spain) in 1979. He studied 2.2 Brønsted Acids as Catalysts chemistry at the University of Alicante and he received his M.Sc. (2003) and Ph. D. degrees (2006) from here under the supervision of 2.3 Other Promoters Prof. José Miguel Sansano and Prof. Carmen Nájera. He was a post- 3 Conclusions and Outlook doctoral researcher in Prof. Pfaltz’s research group (2007–2010). In 2010 he returned to Alicante and joined the research group of Prof. Key words: S 1 reaction, allylic substitution, carbocations, allylic N Carmen Nájera. His main research interests focus on the development alcohols, green chemistry of new environmentally friendly methodologies, especially in asym- metric synthesis. -
Chemical Kinetics HW1 (Kahn, 2010)
Chemical Kinetics HW1 (Kahn, 2010) Question 1. (6 pts) A reaction with stoichiometry A = P + 2Q was studied by monitoring the concentration of the reactant A as a function of time for eighteen minutes. The concentration determination method had a maximum error of 6 M. The following concentration profile was observed: Time (min) Conc (mM) 1 0.9850 2 0.8571 3 0.7482 4 0.6549 5 0.5885 6 0.5183 7 0.4667 8 0.4281 9 0.3864 10 0.3557 11 0.3259 12 0.3037 13 0.2706 14 0.2486 15 0.2355 16 0.2188 17 0.2111 18 0.1930 Determine the reaction order and calculate the rate constant for decomposition of A. What can be said about the mechanism or molecularity of this reaction? Question 2. (4 pts) Solve problem 2 on pg 31 in your textbook (House) using both linear and non-linear regression. Provide standard errors for the rate constant and half-life based on linear and non-linear fits. Below is the data set for your convenience: dataA = {{0, 0.5}, {10, 0.443}, {20,0.395}, {30,0.348}, {40,0.310}, {50,0.274}, {60,0.24}, {70,0.212}, {80,0.190}, {90,0.171}, {100,0.164}} Question 3. (3 pts) Solve problem 3 on pg 32 in your textbook (House). Question 4. (7 pts) The authors of the paper “Microsecond Folding of the Cold Shock Protein Measured by a Pressure-Jump Technique” suggest that the activated state of folding of CspB follows Hammond- type behavior. -
Reactions of Benzene & Its Derivatives
Organic Lecture Series ReactionsReactions ofof BenzeneBenzene && ItsIts DerivativesDerivatives Chapter 22 1 Organic Lecture Series Reactions of Benzene The most characteristic reaction of aromatic compounds is substitution at a ring carbon: Halogenation: FeCl3 H + Cl2 Cl + HCl Chlorobenzene Nitration: H2 SO4 HNO+ HNO3 2 + H2 O Nitrobenzene 2 Organic Lecture Series Reactions of Benzene Sulfonation: H 2 SO4 HSO+ SO3 3 H Benzenesulfonic acid Alkylation: AlX3 H + RX R + HX An alkylbenzene Acylation: O O AlX H + RCX 3 CR + HX An acylbenzene 3 Organic Lecture Series Carbon-Carbon Bond Formations: R RCl AlCl3 Arenes Alkylbenzenes 4 Organic Lecture Series Electrophilic Aromatic Substitution • Electrophilic aromatic substitution: a reaction in which a hydrogen atom of an aromatic ring is replaced by an electrophile H E + + + E + H • In this section: – several common types of electrophiles – how each is generated – the mechanism by which each replaces hydrogen 5 Organic Lecture Series EAS: General Mechanism • A general mechanism slow, rate + determining H Step 1: H + E+ E El e ctro - Resonance-stabilized phile cation intermediate + H fast Step 2: E + H+ E • Key question: What is the electrophile and how is it generated? 6 Organic Lecture Series + + 7 Organic Lecture Series Chlorination Step 1: formation of a chloronium ion Cl Cl + + - - Cl Cl+ Fe Cl Cl Cl Fe Cl Cl Fe Cl4 Cl Cl Chlorine Ferric chloride A molecular complex An ion pair (a Lewis (a Lewis with a positive charge containing a base) acid) on ch lorine ch loronium ion Step 2: attack of -
Lecture 5 Diastereoselective Addition Into Carbonyl Compounds
Lecture 5 Diastereoselective Addition into Carbonyl Compounds Containing α-Stereogenic Centres Learning outcomes: by the end of this lecture, and after answering the associated problems, you will be able to: 1. use the Felkin-Anh T.S. to predict the stereochemical outcome of reactions carried out on carbonyl compounds that possess an α-stereogenic centre; 2. rationalise the preferential adoption of a Felkin-Anh T.S. in nucleophilic addition reactions on steric and stereoelectronic grounds; 3. understand how the presence of an α-electron-withdrawing substituent affects the Felkin-Anh T.S.; 4. use the Felkin-Anh T.S. to prepare 1,2-syn diols from α-alkoxy ketones; 5. use the Cram chelation model to prepare 1,2-anti diols from α-alkoxy ketones. Stereoselective Addition of Nucleophiles into Ketones and Aldehydes containing α- Stereogenic Centres The addition of a nucleophile into a chiral ketone or aldehyde provides diastereoisomers. When the stereogenic centres in the substrate are close to the reacting carbonyl group (e.g. 1,2-disposed), then it is often possible to exploit this stereochemical information to control the stereoselectivity of the addition reaction. This method for controlling the stereochemical outcome of a reaction is known as substrate control. A number of models have been developed for predicting the stereochemical outcome of this type of reaction. Felkin-Anh Model Consider a carbonyl compound containing an α-stereogenic centre in which the three substituents at the α-site are well differentiated in size: O HO Nu Nu OH RL Nu RL RL R R R S M S M S RM R R R R R RS = small substituent RM = medium-sized substituent RL = large substituent Of the two diastereoisomeric alcohol addition products, one will be formed to a greater extent than the other. -
Chip Incompatibility Filters
ChIP Incompatibility Filters Filter Name Type Description includes carboxylic acid halides and >1 acyl halide and related SMARTS derivatives like chloroformates, carbamoyl- , imidoyl halides, etc. >1 aldehyde SMARTS R no heteroatom no isocyanate, ketene, etc. >1 alkyl bromide / iodide SMARTS no acyl halide or related or vinyl halide >1 amine aromatic primary SMARTS aromatic carbon bound to N, N not charged >1 amines (aromatic/aliphatic, primary no amide, enamine, etc., no heteroatom SMARTS or secondary) bound to N, N not charged no amide, enamine, etc, no heteroatom >1 amines nucleophilic (aliphatic SMARTS bound to N, no aromatic carbon bound to primary or secondary) N, N not charged >1 aryl bromide / iodide SMARTS any aryl bromide / iodide >1 aryl halide SMARTS any aryl halide any boronic acid derivative, aromatic or >1 boronic acid derivative SMARTS aliphatic >1 carbonyl acid SMARTS any carboxylic or carbamic acid, etc. >1 carboxylic acid anhydrides SMARTS carbon must be bound to carbonyl no heteroatom bound to carbonyl or >1 carboxylic acid ester SMARTS oxygen, no acid, no anydride, etc >1 isocyanate / isothiocyanate SMARTS no restrictions to nitrogen substituents R no heteroatom, no isocyanate, ketene, >1 ketone or aldehyde SMARTS etc. >1 NH any SMARTS R can be anything >1 thioamide and related (any) SMARTS any substitution >1 thiol and related (nucleophic) SMARTS any SH or negative S >2 NH any SMARTS R can be anything acidic compounds I combination sulfonyl acids and carboxylic acids anhydrides, bicarbonates, thio and imino acyl anhydrides and derivatives SMARTS derivatives, etc. includes carboxylic acid halides and acyl halide and related SMARTS derivatives like chloroformates, carbamoyl- , imidoyl halides, etc. -
Chapter 20 the Carbonyl Can Be an Electrophile, It Can Be Attacked. It Can Occur Under Basic Or Acidic Conditions
Chapter 20 The carbonyl can be an electrophile, it can be attacked. It can occur under basic or acidic conditions. Basic Conditions: H O 1. Nu- O 2. H2O workup Nu Nu: HOH O : Nu Acidic Conditions: H+ H O : 1. H+, Nu: O Nu H + O OH Nu Nu: Hydride reductions. Basic conditions, H- is the nucleophile Ketones and aldehydes react w/ LiAlH4. H O 1. LiAlH4 O 2. H2O workup - H H: HOH O : H Esters and acid chlorides react w/ LiAlH4. H O 1. LiAlH4 O 2. H O workup OMe 2 H - H H: HOH O : O O : OMe H H H - H H: There are many sources of hydride with various reactivities Hydride Aldehyde Ketone Ester Amide Carboxyllic Acid Donors acid/ acid salt halide LiAlH4 Alcohol Alcohol Alcohol Amine Alcohol Alcohol LiAlH(OtBu)3 Alcohol Alcohol Alcohol - (too slow) N.R. Aldehyde NaBH4 Alcohol Alcohol N.R. N.R. N.R. ? NaBH3CN Alcohol N.R. N.R. N.R. N.R. ? DIBAL-H Alcohol Alcohol Aldehyde * Aldehyde* Alcohol ? * Stoichiometry must be carefully controlled. H2, Pd/C reacts preferentially with carbon-carbon double bonds. Carbon Nucleophiles: - Both of the following create reagents that act like CH3 . EtBr + 2Li →EtLi + LiBr EtBr + Mg → EtMgBr Alkyne nucleophiles. - + CH3C≡CH + NaNH2→ CH3C≡C: Na + NH3 - + CH3C≡CH + CH3Li → CH3C≡C: Li + CH4↑ CH3C≡CH + CH3MgBr → CH3C≡CMgBr + CH4↑ Ketones and aldehydes react w/ these carbon nucleophiles. H O 1. H3C CCMgBr O 2. H2O workup - C CH3CC: C CH HOH 3 O : Esters and acid chlorides react w/ these carbon nucleophiles. -
NEW TANDEM REACTIONS INVOLVING NUCLEOPHILIC AROMATIC SUBSTITUTION by JAMES ERVIN SCHAMMERHORN III Associates of Science Murray
NEW TANDEM REACTIONS INVOLVING NUCLEOPHILIC AROMATIC SUBSTITUTION By JAMES ERVIN SCHAMMERHORN III Associates of Science Murray State College Tishomingo, Oklahoma 2003 Bachelor of Science in Chemistry Oklahoma State University Stillwater, Oklahoma 2006 Submitted to the Faculty of the Graduate College of the Oklahoma State University in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY May, 2011 1 NEW TANDEM REACTIONS INVOLVING NUCLEOPHILIC ARMOMATIC SUBSTITUTION Thesis Approved: Dr. Richard Bunce Thesis Adviser Dr. K. Darrell Berlin Dr. Ziad El-Rassi Dr. Nicholas Materer Dr. Andrew Mort Dr. Mark E. Payton Dean of the Graduate College ii ACKNOWLEDGMENTS I would like to express my sincere gratitude to Dr. R. A. Bunce, my research advisor, my graduate committee chairman and my friend. I have learned many valuable lessons working alongside him in his research laboratory. His ability to teach both organic theory and laboratory techniques have been instrumental in my research at Oklahoma State University. I am immensely thankful for his support, guidance and patience to me during the course of this research. His unique sense of humor always makes me laugh and makes it a joy to come to lab. I would also like to thank my committee members, Drs. K. D. Berlin, Z. El Rassi, N. F. Materer, and A. J. Mort their acceptance to be on my committee. Their insights into research and graduate life have been invaluable during my graduate career. I am especially grateful to Dr. Berlin for sharing his wealth of organic chemistry knowledge with me during the course of my research. Also, to Dr. -
Chapter 23: Substituted Hydrocarbons and Their Reactions
736-773_Ch23-866418 5/9/06 3:37 PM Page 736 CHAPTER 23 Substituted Hydrocarbons and Their Reactions Chemistry 2.b, 2.d, 2.h, 3.a, 3.g, 8.c, 10.a, 10.b, 10.e I&E 1.b, 1.c, 1.j What You’ll Learn ▲ You will recognize the names and structures of several important organic functional groups. ▲ You will classify reactions of organic substances as sub- stitution, addition, elimina- tion, oxidation-reduction, or condensation and predict products of these reactions. ▲ You will relate the struc- tures of synthetic polymers to their properties. Why It’s Important Whether you are removing a sandwich from plastic wrap, taking an aspirin, or shooting baskets, you’re using organic materials made of substituted hydrocarbons. These com- pounds are in turn made of molecules whose atoms include carbon, hydrogen, and other elements. Visit the Chemistry Web site at chemistrymc.com to find links about substituted hydrocarbons and their reactions. The spooled threads shown in the photo are made from large organ- ic molecules called polymers. 736 Chapter 23 736-773_Ch23-866418 5/9/06 3:37 PM Page 737 DISCOVERY LAB Making Slime Chemistry 10.b n addition to carbon and hydrogen, most organic substances con- Itain other elements that give the substances unique properties. In this lab, you will work with an organic substance consisting of long carbon chains to which many ϪOH groups are bonded. How will the properties of this substance change when these groups react to form bonds called crosslinks between the chains? Safety Precautions Do not allow solutions or product to contact eyes or exposed skin.