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DNA-Based Environmental Monitoring for the Invasive Myxozoan Parasite, Myxobolus Cerebralis, in Alberta, Canada
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Annelida: Clitellata: Naididae): a New Non-Indigenous Species for Europe, and Other Non-Native Annelids in the Schelde Estuary
Aquatic Invasions (2013) Volume 8, Issue 1: 37–44 doi: http://dx.doi.org/10.3391/ai.2013.8.1.04 Open Access © 2013 The Author(s). Journal compilation © 2013 REABIC Research Article Bratislavia dadayi (Michaelsen, 1905) (Annelida: Clitellata: Naididae): a new non-indigenous species for Europe, and other non-native annelids in the Schelde estuary Jan Soors1*, Ton van Haaren2, Tarmo Timm3 and Jeroen Speybroeck1 1 Research Institute for Nature and Forest (INBO), Kliniekstraat 25, 1070 Brussel, Belgium 2 Grontmij, Sciencepark 406, 1090 HC Amsterdam, The Netherlands 3 Centre for Limnology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, 61117 Rannu, Tartumaa, Estonia E-mail: [email protected] (JS), [email protected] (TvH), [email protected] (JS), [email protected] (TT) *Corresponding author Received: 18 November 2011 / Accepted: 24 January 2013 / Published online: 21 February 2013 Handling editor: Vadim Panov Abstract For the first time, the freshwater oligochaete species Bratislavia dadayi (Michaelsen, 1905) is recorded in Europe. The species was found at three subtidal stations in the Schelde estuary in Belgium, where it was probably introduced from the Americas. We provide an overview of the species’ nomenclature, diagnostics, distribution, and ecology. Bratislavia dadayi is one of 11 non-indigenous annelids currently known to occur in the Schelde estuary. Key words: alien species; Annelida; Clitellata; Oligochaeta; Polychaeta; Belgium Introduction Annelids, and oligochaetes in particular, are a less-studied group, often overlooked when Over the last 150 years, the number of non- considering alien species. Yet the best studied native species turning up in areas far from their Annelid species, Lumbricus terrestris (L., 1758), original range has increased significantly (Bax et is now considered a widespread invasive species al. -
Annelida, Oligochaeta) from the Island of Elba (Italy)
Org. Divers. Evol. 2, 289–297 (2002) © Urban & Fischer Verlag http://www.urbanfischer.de/journals/ode Taxonomy and new bacterial symbioses of gutless marine Tubificidae (Annelida, Oligochaeta) from the Island of Elba (Italy) Olav Giere1,*, Christer Erséus2 1 Zoologisches Institut und Zoologisches Museum, Universität Hamburg, Germany 2 Department of Invertebrate Zoology, Swedish Museum of Natural History, Stockholm Received 15 April 2002 · Accepted 9 July 2002 Abstract In shallow sublittoral sediments of the north-west coast of the Island of Elba, Italy, a new gutless marine oligochaete, Olavius ilvae n. sp., was found together with a congeneric but not closely related species, O. algarvensis Giere et al., 1998. In diagnostic features of the genital organs, the new species differs from other Olavius species in having bipartite atria and very long, often folded spermathecae, but lacking penial chaetae.The Elba form of O. algarvensis has some structural differences from the original type described from the Algarve coast (Portugal).The two species from Elba share characteristics not previously reported for gutless oligochaetes: the lumen of the body cavity is unusually constrict- ed and often filled with chloragocytes, and the symbiotic bacteria are often enclosed in vacuoles of the epidermal cells. Regarding the bacterial ultrastructure, the species share three similar morphotypes as symbionts; additionally, in O. algarvensis a rare fourth type was found.The diver- gence of the symbioses in O. algarvensis, and the coincidence in structural -
The Relation of Tidal Height and Sediment Type to the Intertidal Distribution of Marine Oligochaetes in Coos Bay, Oregon
AN ABSTRACT OF THE THESIS OF David Randall Strehiow for the degree of Master of Science in the School of Oceanography presentedon 3 May 1982 Title: The Relation of.Tidal Height and Sediment Type to the Inter- tidal Distributi Redacted for privacy Abstract approved: .J. Gonor The taxonomy of intertidal oligochaetès, and the relationships between oligochaete species distributions, tidal height, and sediment type, were studied in detail for a sand and mud flat in lower Coos Bay, Oregon. Eighteen species, representing four families, were identified. Three species of Enchytraeidae (Marionina vaucheriae, Marionina callianassae, and Marionina gpnori) and one species of Tubificidae (Aktedrilus oregpnensis) are new to science. A preliminary description of a new family, Psamotheriidae, based on Psarrrnotheriuni hastatus n.g. n.sp. is given. Other species present were Marionina vancouverensis, M. sjaelandica, N. subterranea, and N. achaeta (Enchytraeidae); Aktedrilus locyi, Li.mnodriloides monothecus, L. victoriensis, L. vérrucosus, Tubificoides coatesae, and T. pseudogaster (Tubificidae); and Paranais litoralis (Naididae). Individuals of Enchytraeus sp. and Lumbricillus spp. (Enchytraeidae) were found but were not fully mature, and therefore could not be identified to species. Nine of the eighteen species are known oniy from the northeast Pacific littoral zone, indicating the existence of a distinct regthnal oligochaete fauna. Earlier studies of the Enchytraeidae (Coates and Ellis 1981) and Tubificidae (Brinkhurst and Baker 1979) support this conclusion. Distinct oligochaete species assemblages were closely associated with physical habitat types defined by tidal exposure and sediment type. The distributions of species were not correlated with each other or with physical habitat types, however. Tide levels at which large changes in maximum continuous tidal exposure or submergence occur (critical tide levels) are strongly associated with. -
Phylogenetic and Functional Characterization of Symbiotic Bacteria in Gutless Marine Worms (Annelida, Oligochaeta)
Phylogenetic and functional characterization of symbiotic bacteria in gutless marine worms (Annelida, Oligochaeta) Dissertation zur Erlangung des Grades eines Doktors der Naturwissenschaften -Dr. rer. nat.- dem Fachbereich Biologie/Chemie der Universität Bremen vorgelegt von Anna Blazejak Oktober 2005 Die vorliegende Arbeit wurde in der Zeit vom März 2002 bis Oktober 2005 am Max-Planck-Institut für Marine Mikrobiologie in Bremen angefertigt. 1. Gutachter: Prof. Dr. Rudolf Amann 2. Gutachter: Prof. Dr. Ulrich Fischer Tag des Promotionskolloquiums: 22. November 2005 Contents Summary ………………………………………………………………………………….… 1 Zusammenfassung ………………………………………………………………………… 2 Part I: Combined Presentation of Results A Introduction .…………………………………………………………………… 4 1 Definition and characteristics of symbiosis ...……………………………………. 4 2 Chemoautotrophic symbioses ..…………………………………………………… 6 2.1 Habitats of chemoautotrophic symbioses .………………………………… 8 2.2 Diversity of hosts harboring chemoautotrophic bacteria ………………… 10 2.2.1 Phylogenetic diversity of chemoautotrophic symbionts …………… 11 3 Symbiotic associations in gutless oligochaetes ………………………………… 13 3.1 Biogeography and phylogeny of the hosts …..……………………………. 13 3.2 The environment …..…………………………………………………………. 14 3.3 Structure of the symbiosis ………..…………………………………………. 16 3.4 Transmission of the symbionts ………..……………………………………. 18 3.5 Molecular characterization of the symbionts …..………………………….. 19 3.6 Function of the symbionts in gutless oligochaetes ..…..…………………. 20 4 Goals of this thesis …….………………………………………………………….. -
Envall Et Al
Molecular Phylogenetics and Evolution 40 (2006) 570–584 www.elsevier.com/locate/ympev Molecular evidence for the non-monophyletic status of Naidinae (Annelida, Clitellata, TubiWcidae) Ida Envall a,b,c,¤, Mari Källersjö c, Christer Erséus d a Department of Zoology, Stockholm University, SE-106 91 Stockholm, Sweden b Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden c Laboratory of Molecular Systematics, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden d Department of Zoology, Göteborg University, Box 463, SE-405 30 Göteborg, Sweden Received 24 October 2005; revised 9 February 2006; accepted 15 March 2006 Available online 8 May 2006 Abstract Naidinae (former Naididae) is a group of small aquatic clitellate annelids, common worldwide. In this study, we evaluated the phylo- genetic status of Naidinae, and examined the phylogenetic relationships within the group. Sequence data from two mitochondrial genes (12S rDNA and 16S rDNA), and one nuclear gene (18S rDNA), were used. Sequences were obtained from 27 naidine species, 24 species from the other tubiWcid subfamilies, and Wve outgroup taxa. New sequences (in all 108) as well as GenBank data were used. The data were analysed by parsimony and Bayesian inference. The tree topologies emanating from the diVerent analyses are congruent to a great extent. Naidinae is not found to be monophyletic. The naidine genus Pristina appears to be a derived group within a clade consisting of several genera (Ainudrilus, Epirodrilus, Monopylephorus, and Rhyacodrilus) from another tubiWcid subfamily, Rhyacodrilinae. These results dem- onstrate the need for a taxonomic revision: either Ainudrilus, Epirodrilus, Monopylephorus, and Rhyacodrilus should be included within Naidinae, or Pristina should be excluded from this subfamily. -
A Test of Monophyly of the Gutless Phallodrilinae (Oligochaeta
A test of monophyly of the gutless Phallodrilinae (Oligochaeta, Tubificidae) and the use of a 573-bp region of the mitochondrial cytochrome oxidase I gene in analysis of annelid phylogeny JOHAN A. A. NYLANDER,CHRISTER ERSEÂ US &MARI KAÈ LLERSJOÈ Accepted 7 Setember 1998 Nylander, J. A. A., ErseÂus, C. & KaÈllersjoÈ , M. (1999) A test of monophyly of the gutless Phallodrilinae (Oligochaeta, Tubificidae) and the use of a 573 bp region of the mitochondrial cytochrome oxidase I sequences in analysis of annelid phylogeny. Ð Zoologica Scripta 28, 305±313. A 573-bp region of the mitochondrial gene cytochrome c oxidase subunit I (COI) of two species of Inanidrilus ErseÂus and four species of Olavius ErseÂus (Phallodrilinae, Tubificidae) is used in a parsimony analysis together with a selection of 35 other annelids (including members of Polychaeta, Pogonophora, Aphanoneura, and the clitellate taxa Tubificidae, Enchytraeidae, Naididae, Lumbriculidae, Haplotaxidae, Lumbricidae, Criodrilidae, Branchiobdellida and Hirudinea), and with two molluscs as outgroups. The data support the monophyly of the Olavius and Inanidrilus group, with a monophyletic Inanidrilus. However, parsimony jackknife analyses show that most of the other groups are unsupported by the data set, thus revealing a large amount of homoplasy in the selected gene region. Practically no information is given of within/between family relationships except for a few, closely related species. This suggests that the analysed COI region is not useful, when used alone, for inferring higher level relationships among the annelids. Johan A. A. Nylander, Department of Systematic Zoology, Evolutionary Biology Center, Uppsala University, NorbyvaÈgen 18D, SE-752 36 Uppsala, Sweden. Christer ErseÂus, Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden. -
Annelida: Clitellata: Naididae) ⇑ Yingkui Liu A, Steven V
Molecular Phylogenetics and Evolution 112 (2017) 244–257 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Multi-locus phylogenetic analysis of the genus Limnodrilus (Annelida: Clitellata: Naididae) ⇑ Yingkui Liu a, Steven V. Fend b, Svante Martinsson a, Xu Luo a, Akifumi Ohtaka c, Christer Erséus a, a Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30 Göteborg, Sweden b 17650 Kilkenny Rd., Los Gatos, CA 95030, USA c Department of Natural Science, Faculty of Education, Hirosaki University, Hirosaki, Aomori 036-8560, Japan article info abstract Article history: Limnodrilus species are annelid worms distributed worldwide in various freshwater sediments. The sys- Received 22 December 2016 tematics of Limnodrilus has chiefly been based on morphology, but the genus has not been subject to any Revised 24 March 2017 closer phylogenetic studies over the past two decades. To reconstruct the evolutionary history of Accepted 20 April 2017 Limnodrilus, and to assess the monophyly of this genus and its systematic position within the subfamily Available online 27 April 2017 Tubificinae (Annelida: Clitellata: Naididae), 45 Limnodrilus specimens, representing 19 species, and 35 other naidid species (representing 24 genera) were sampled. The data consisted of sequences of three Keywords: mitochondrial genes (COI, 12S and 16S rDNA) and four nuclear markers (18S and 28S rDNA, Histone 3, Oligochaetes and ITS). The phylogeny was estimated, using Maximum Likelihood and Bayesian analyses of concate- Clitellates Limnodrilus nated data of seven DNA loci, as well as a multi-locus coalescent-based approach. All analyses strongly Phylogeny suggest that Limnodrilus is monophyletic, but only if the morphospecies L. -
Menemen-‹Zmir)
TurkJZool 28(2004)183-197 ©TÜB‹TAK OligochaetaandAphanoneura(Annelida)Faunaofthe GedizDelta(Menemen-‹zmir) SüleymanBALIK,M.RuflenUSTAO⁄LU,SerayYILDIZ EgeUniversity,FisheriesFaculty,DepartmentofHydrobiology,35100Bornova,‹zmir-TURKEY Received:09.01.2003 Abstract: Thespecimenswerecollectedfrom16stationsbetweenFebruary1998andMay1999withtheaimofseasonally determiningtheOligochaetaandAphanoneurafaunaoftheGedizDelta.Thespecimensobtainedbycollectionofmudsampleswith anEkmangrabandeliminationwithafine500µmsievewerepreservedin4%formaldehydesolution. Atotalof47speciesweredetermined,comprising25speciesfromTubificidae,17speciesfromNaididae,3speciesfrom Enchytraeidaeand2speciesfromAeolosomatidae.Seventeenofthespeciesdeterminedarenewrecordsfortheinlandwaterfauna ofTurkey. KeyWords: Oligochaeta,Aphanoneura,Fauna,GedizDelta,‹zmir. GedizDeltas›’n›n(Menemen-‹zmir)OligochaetaveAphanoneura(Annelida)Faunas› Özet: GedizDeltas›’n›nOligochaetaveAphanoneurafaunas›n›belirlemekamac›yla,fiubat1998-May›s1999tarihleriaras›nda,16 istasyondanmevsimselörneklemeleryap›lm›flt›r.‹stasyonlardanal›nançamurörneklerinin500µmgözaç›kl›¤›ndakielekten geçirilmesiyleeldeedilenörnekler%4’lükformoldetespitedilmifltir. Örneklerinde¤erlendirilmesisonucunda,Tubificidaefamilyas›ndan25takson,Naididaefamilyas›ndan17takson,Enchytraeidae familyas›ndan3taksonveAeolosomatidaefamilyas›ndan2taksonolmaküzeretoplam47taksonsaptanm›flolup,bunlardan17’si Türkiyefaunas›içinilkdefabildirilmektedir. AnahtarSözcükler: Oligochaeta,Aphanoneura,Fauna,GedizDeltas›,‹zmir. Introduction faunaoftheGedizriversysteminastudyofTurkey’s -
This Article Appeared in a Journal Published by Elsevier. the Attached
This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/copyright Author's personal copy Molecular Phylogenetics and Evolution 57 (2010) 687–702 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Genetic variation and phylogeny of the cosmopolitan marine genus Tubificoides (Annelida: Clitellata: Naididae: Tubificinae) a,b, c a Sebastian Kvist ⇑, Indra Neil Sarkar , Christer Erséus a Department of Zoology, University of Gothenburg, Box 463, SE-405 30 Göteborg, Sweden b Richard Gilder Graduate School, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024, USA c Center for Clinical and Translational Science, Department of Microbiology & Molecular Genetics and Department of Computer Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington VT 05405, USA article info a b s t r a c t Article history: Prior attempts to resolve the phylogenetic relationships of the cosmopolitan, marine clitellate genus Received 15 February 2010 Tubificoides, using only morphology, resulted in unresolved trees. -
(Clitellata: Annelida) Adrian Pinder TRIN Taxonomic Guide 2
Tools for identifying selected Australian aquatic oligochaetes (Clitellata: Annelida) Adrian Pinder TRIN Taxonomic Guide 2. 1 Tools for identifying selected Australian aquatic oligochaetes (Clitellata : Annelida) Adrian Pinder Science Division Department of Environment and Conservation PO Box 51, Wanneroo 6946 Western Australia Taxonomy Research and Information Network (TRIN) TRIN Taxonomic Guide 2. Presented at the Taxonomic Workshop held at La Trobe University, Albury-Wodonga Campus, Wodonga, February 10-11 th 2009. 2 Tools for identifying selected Australian aquatic oligochaetes (Clitellata: Annelida) Adrian Pinder Science Division, Department of Environment and Conservation, P.O. Box 51, Wanneroo, 6946, Western Australia. CONTENTS INTRODUCTION...................................................................................................................3 CLASSIFICATION.................................................................................................................5 EXPLANATION OF CHARACTERS ......................................................................................6 Fixation and preservation ................................................................................. 14 Examination of specimens ............................................................................... 14 Recipe for Grenacher’s borax carmine ........................................................... 15 Examination of the genitalia ............................................................................. 15 KEY TO ANNELID -
Small Subunit Ribosomal DNA Characterization of an Unidentified Aurantiactinomyxon Form and Its Oligochaete Host Tubifex Ignotus
DISEASES OF AQUATIC ORGANISMS Vol. 54: 229–241, 2003 Published April 24 Dis Aquat Org Small subunit ribosomal DNA characterization of an unidentified aurantiactinomyxon form and its oligochaete host Tubifex ignotus C. Negredo*, E. Dillane, M. F. Mulcahy Department of Zoology and Animal Ecology, National University of Ireland, Lee Maltings, Prospect Row, Cork, Ireland ABSTRACT: In this study, the small subunit (18S) ribosomal DNA gene from an aurantiactinomyxon form of unknown taxonomic position (A1) and from its aquatic oligochaete host (Tubifex ignotus) were characterized. Molecular sequence information on A1 was obtained to allow comparisons of this gene with known sequences from known myxosporean forms, and therefore to investigate possible relationships between this organism and its alternate myxosporean stage. Sequence data for the oligochaete host, together with morphological features, will allow reliable identification of this species in the future. Sequence data derived from the 18S DNA gene and data from other related or non-related organisms were analyzed and used to construct a phylogenetic tree. Phylogenetic stud- ies provided an insight into the taxonomic position of A1. Sequence similarities within the 18S rDNA A1 gene and compared organisms indicated that A1 was most closely related to members of the sub- order Variisporina (Myxidium lieberkuehni [Ml] and Sphaerospora oncorhynchi [So]). Clustering of the 3 organisms in the same branch was well supported by high bootstrap values (81%). A1 showed higher similarities with sequences of Ml (approximately 80%) than with So (approximately 79%). Myxosporean sequence analysis indicated that phylogenetic arrangements do not support traditional classification based on morphological criteria of the spores, but rather support arrangement by tissue location.