Envall Et Al

Total Page:16

File Type:pdf, Size:1020Kb

Envall Et Al Molecular Phylogenetics and Evolution 40 (2006) 570–584 www.elsevier.com/locate/ympev Molecular evidence for the non-monophyletic status of Naidinae (Annelida, Clitellata, TubiWcidae) Ida Envall a,b,c,¤, Mari Källersjö c, Christer Erséus d a Department of Zoology, Stockholm University, SE-106 91 Stockholm, Sweden b Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden c Laboratory of Molecular Systematics, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden d Department of Zoology, Göteborg University, Box 463, SE-405 30 Göteborg, Sweden Received 24 October 2005; revised 9 February 2006; accepted 15 March 2006 Available online 8 May 2006 Abstract Naidinae (former Naididae) is a group of small aquatic clitellate annelids, common worldwide. In this study, we evaluated the phylo- genetic status of Naidinae, and examined the phylogenetic relationships within the group. Sequence data from two mitochondrial genes (12S rDNA and 16S rDNA), and one nuclear gene (18S rDNA), were used. Sequences were obtained from 27 naidine species, 24 species from the other tubiWcid subfamilies, and Wve outgroup taxa. New sequences (in all 108) as well as GenBank data were used. The data were analysed by parsimony and Bayesian inference. The tree topologies emanating from the diVerent analyses are congruent to a great extent. Naidinae is not found to be monophyletic. The naidine genus Pristina appears to be a derived group within a clade consisting of several genera (Ainudrilus, Epirodrilus, Monopylephorus, and Rhyacodrilus) from another tubiWcid subfamily, Rhyacodrilinae. These results dem- onstrate the need for a taxonomic revision: either Ainudrilus, Epirodrilus, Monopylephorus, and Rhyacodrilus should be included within Naidinae, or Pristina should be excluded from this subfamily. Monophyly of four out of six naidine genera represented by more than one species is supported: Chaetogaster, Dero, Paranais, and Pristina, respectively. © 2006 Elsevier Inc. All rights reserved. Keywords: Naidinae; Naididae; Rhyacodrilinae; TubiWcidae; 12S rDNA; 16S rDNA; 18S rDNA; Phylogeny; Taxonomy 1. Introduction Naidids are capable of reproducing asexually, by bud- ding (paratomy) or fragmentation (architomy) (Brinkhurst Naidid worms are small aquatic clitellate annelids, com- and Jamieson, 1971; Sperber, 1948). Paratomic Wssion is mon worldwide. About 180 species have been described most usual. This is a peculiar process in which a new head, (Erséus, 2005), and 24 genera are currently recognized and in front of this a new tail, is intercalated in the middle (Table 1). Most species inhabit freshwater, but some are of the original worm’s body. In this way, a transient linked adapted to brackish or marine habitats (Sperber, 1948). chain of individuals may be formed (Bely and Wray, 2001, They are primarily found in superWcial sediment layers, or 2004; Dehorne, 1916). Partly because of this vegetative at the surface of aquatic vegetation, and some species are mode of reproduction, which makes it possible for a worm even active swimmers (Erséus, 2005). Most species are detri- to produce many oVspring in a short time, naidid popula- tivorous, but carnivory and parasitism exist (Brinkhurst tions may increase rapidly under favorable conditions (e.g., and Jamieson, 1971). Armendáriz, 2000; Loden, 1981). Naidids also periodically reproduce sexually (e.g., Erséus, 2005; Sperber, 1948). Naididae was long regarded as a separate family within the clitellate order TubiWcida. However, several studies, * Corresponding author. Fax: +46 8 5195 5181. both morphological (Brinkhurst, 1994; Erséus, 1987, 1990) E-mail address: [email protected] (I. Envall). and molecular, based on 28S rDNA (but referred to as 1055-7903/$ - see front matter © 2006 Elsevier Inc. All rights reserved. doi:10.1016/j.ympev.2006.03.021 I. Envall et al. / Molecular Phylogenetics and Evolution 40 (2006) 570–584 571 Table 1 Naidinae, within TubiWcidae, and from now on we will use The genera within Naididae sensu Brinkhurst and Jamieson (1971) (plus the proposed subfamily name Naidinae (sensu Erséus and the two genera Bratislavia Kosel, 1976, and Rhopalonais Dzwillo and Gustavsson, 2002) in this paper. [Erséus et al. (2005) has Grimm, 1974 later described) asked the International Commission of Zoological Nomen- Allonais Sperber, 1948 • • clature to conserve the usage of the family group name Amphichaeta Tauber, 1879 W Arcteonais Piguet, 1928 Tubi cidae, despite that it is younger than the family group Branchiodrilus Michaelsen, 1900 name Naididae.] Bratislavia Kosel, 1976 In addition to Naidinae, Wve tubiWcid subfamilies are rec- Chaetogaster von Baer, 1827 • ognized: Limnodriloidinae, Phallodrilinae, Rhyacodrilinae, • Dero Oken, 1815 Telmatodrilinae, and TubiWcinae (Erséus, 1990), although it Haemonais Bretscher, 1900 Homochaeta Bretscher, 1896 is not probable that all these groups are natural (Erséus, Nais Müller, 1773 • 1990; Erséus and Ferraguti, 1995; Erséus and Gustavsson, Neonaisa Sokolskaya, 1962 2002; Erséus et al., 2000, 2002; Sjölin et al., 2005). There are Ophidonais Gervais, 1838 • indications that Naidinae is closely related to Rhyacodrili- • Paranais Czerniavsky, 1880 nae. It has been placed close to, or even nested within, Rhya- Piguetiella Sperber, 1939 • Pristina (including Pristinella)b Ehrenberg, 1828 • codrilinae in several phylogenetic studies (Brinkhurst, 1994; Rhopalonais Dzwillo and Grimm, 1974 Christensen and Theisen, 1998; Erséus, 1990; Erséus et al., Ripistes Dujardin, 1842 • 2000, 2002; Sjölin et al., 2005). However, in these studies the Slavina Vejdovský, 1883 • number of taxa from the two groups has been insuYcient to • Specaria Sperber, 1939 enable any detailed conclusions. Stephensoniana Cernosvitov, 1938 Stylaria Lamarck, 1816 • Three morphology-based hypotheses on the naidine phy- Uncinais Levinsen, 1884 • logeny have been formulated in the last century (Lastobkin, Vejdovskyella Michaelsen, 1903 • 1924; Nemec and Brinkhurst, 1987; Sperber, 1948). The two Wapsac Marcus, 1965 oldest of these were not based on explicit phylogenetic prin- A bullet indicates that the genus is represented in this study ciples, but rather on mere morphological similarity. The a A genus which remains inadequately described (Brinkhurst and Jamie- three hypotheses are fundamentally diVerent in several son, 1971). respects, probably at least partly because of the low number b Brinkhurst (1985) divided Pristina into Pristina and Pristinella, but the two groups were reunited, since species with a mix of Pristina and of independent morphological characters. According to Las- Pristinella characters were described by Collado and Schmelz (2000). tobkin (1924) there are two groups within “Naididae”, i.e., c Wapsa is today regarded as a synonym of Paranais (Brinkhurst and Pristininae (Pristina) and Naidinae (sensu Lastobkin) (all Coates, 1985). other genera). Sperber (1948) identiWed four subfamilies: Pristininae (Pristina), Paranaidinae (Paranais), Chaetogas- “23S”) in combination with the COI gene (Christensen and trinae (Chaetogaster and Amphichaeta), and Naidinae (sensu Theisen, 1998), 18S rDNA (Erséus et al., 2002; Erséus and Sperber) (all remaining genera). According to Nemec and Källersjö, 2004), and 18S rDNA combined with 16S rDNA Brinkhurst (1987), Wnally, there are two subfamilies within (Sjölin et al., 2005), support that the naidids should be “Naididae”: Stylarinae and Naidinae (sensu Nemec and treated as an ingroup of another family, TubiWcidae. The Brinkhurst, 1987). Stylarinae consists of the genera Stylaria, genitalia have a more anterior position in naidids (in seg- Arcteonais, Ripistes, Vejdovskyella, Slavina, Stephensoniana ments IV–V to VII–VIII) compared to in tubiWcids (seg- (incertae sedis), and Piguetiella (incertae sedis). Naidinae ments X–XI), and this condition, together with the ability (sensu Nemec and Brinkhurst, 1987) consists of all the of Wssion, have been the main reasons assigning Naididae remaining genera, divided into four tribes: Naidini, Derini, family status. Sometimes, Naididae has in fact been Pristinini, and Chaetogastrini. regarded as a “primitive” clitellate group, not even closely In a recent study, Bely and Wray (2004) used molecular related to TubiWcidae (Omodeo, 1998), because of a com- data (COI) in the attempt to reconstruct the naidine phy- paratively simple circulatory system, and a somewhat leech- logeny. The result from this study suggests two groups: one like embryology. However, the morphology of the genitalia comprising the genus Pristina, and the other comprising all of TubiWcidae and Naididae, respectively, is similar, with other genera sampled. prostate glands directly associated with the atrium (which The aim of the present study was to evaluate the mono- is a part of the male eVerent duct). Moreover, the reproduc- phyly of Naidinae sensu Erséus and Gustavsson (2002), tive structures are located in two consecutive segments in with special emphasis on its relationship to Rhyacodrilinae, both groups (although in diVerent segment pairs), with the and to Wnd a hypothesis about the phylogeny within the Wrst segment containing one pair of testes and one pair of group. 18S rDNA sequences have been used several times spermathecae, and the other segment containing one pair of before, dealing with clitellate phylogenies (Apakupakul ovaries and one pair of male eVerent ducts. Furthermore, et al., 1999; Erséus et al., 2000, 2002; Erséus and Källersjö, the spermatozoa exhibit ultrastructural
Recommended publications
  • Annelida: Oligochaeta: Naididae) Geographical Distribution from Southern Caspian Sea Basin, Mazandaran Province - Iran
    Iranian Journal of Fisheries Sciences 20(1) 109-128 2021 DOI: 10.22092/ijfs.2021.351016.0 Research Article New report for Pristinella jenkinae Stephenson, 1931 (Annelida: Oligochaeta: Naididae) geographical distribution from Southern Caspian Sea basin, Mazandaran province - Iran Erfani M.1* Received: May 2020 Accepted: November 2020 Abstract Pristinella jenkinae (Stephenson, 1931) is a freshwater cosmopolitan oligochaete. This species was found during limnological investigation in two rivers alongside Iranian coasts and has not been previously reported from Iran‟s freshwater fauna and Southern Caspian Sea basin. The specimens of P. jenkinae were collected bimonthly from Cheshmehkileh and Sardabrood rivers and estuaries (river mouth) using a Van Veen grab (0.03 m2) and Surber (0.1 m2, 0.2 mm-mesh size) samplers at three stations in each estuary (S1: riverine, S2: estuary and S3: marine ecosystem) with three replicates from November 2014 through September 2015. Results of temporal distribution showed that the highest and lowest density and biomass of this species were in January (102.3±68.3 ind m-2 and 0.075±0.034g m-2) and in September (24.4±12.3 ind m-2 and 0.020±0.005g m-2), respectively which were significantly different (N=57, t=0.99, p<0.05). Spatial distribution of P. jenkinae among sampling stations (S1, S2 and S3) showed significant differences (N=57, t=0.99, p<0.05). Freshwater stations (S1) within the river showed Downloaded from jifro.ir at 17:51 +0330 on Friday September 24th 2021 higher density and biomass (112.1±64.8 ind m-2 and 0.082±0.035g m-2) than semi- brackish stations (S2) within the estuary (18.8±10.3 ind m-2 and 0.013±0.005g m-2).
    [Show full text]
  • Annelida: Clitellata: Naididae): a New Non-Indigenous Species for Europe, and Other Non-Native Annelids in the Schelde Estuary
    Aquatic Invasions (2013) Volume 8, Issue 1: 37–44 doi: http://dx.doi.org/10.3391/ai.2013.8.1.04 Open Access © 2013 The Author(s). Journal compilation © 2013 REABIC Research Article Bratislavia dadayi (Michaelsen, 1905) (Annelida: Clitellata: Naididae): a new non-indigenous species for Europe, and other non-native annelids in the Schelde estuary Jan Soors1*, Ton van Haaren2, Tarmo Timm3 and Jeroen Speybroeck1 1 Research Institute for Nature and Forest (INBO), Kliniekstraat 25, 1070 Brussel, Belgium 2 Grontmij, Sciencepark 406, 1090 HC Amsterdam, The Netherlands 3 Centre for Limnology, Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, 61117 Rannu, Tartumaa, Estonia E-mail: [email protected] (JS), [email protected] (TvH), [email protected] (JS), [email protected] (TT) *Corresponding author Received: 18 November 2011 / Accepted: 24 January 2013 / Published online: 21 February 2013 Handling editor: Vadim Panov Abstract For the first time, the freshwater oligochaete species Bratislavia dadayi (Michaelsen, 1905) is recorded in Europe. The species was found at three subtidal stations in the Schelde estuary in Belgium, where it was probably introduced from the Americas. We provide an overview of the species’ nomenclature, diagnostics, distribution, and ecology. Bratislavia dadayi is one of 11 non-indigenous annelids currently known to occur in the Schelde estuary. Key words: alien species; Annelida; Clitellata; Oligochaeta; Polychaeta; Belgium Introduction Annelids, and oligochaetes in particular, are a less-studied group, often overlooked when Over the last 150 years, the number of non- considering alien species. Yet the best studied native species turning up in areas far from their Annelid species, Lumbricus terrestris (L., 1758), original range has increased significantly (Bax et is now considered a widespread invasive species al.
    [Show full text]
  • Phylogenetic Diversity of Bacterial Endosymbionts in the Gutless Marine Oligochete Olaviusloisae (Annelida)
    MARINE ECOLOGY PROGRESS SERIES Vol. 178: 271-280.1999 Published March 17 Mar Ecol Prog Ser l Phylogenetic diversity of bacterial endosymbionts in the gutless marine oligochete Olavius loisae (Annelida) Nicole ~ubilier'~*,Rudolf ~mann',Christer Erseus2, Gerard Muyzer l, SueYong park3, Olav Giere4, Colleen M. cavanaugh3 'Molecular Ecology Group, Max Planck Institute of Marine Microbiology, Celsiusstr. 1. D-28359 Bremen, Germany 'Department of Invertebrate Zoology. Swedish Museum of Natural History. S-104 05 Stockholm. Sweden 3~epartmentof Organismic and Evolutionary Biology, Harvard University, The Biological Laboratories, Cambridge, Massachusetts 02138, USA 4Zoologisches Institut und Zoologisches Museum. University of Hamburg, D-20146 Hamburg, Germany ABSTRACT: Endosymbiotic associations with more than 1 bacterial phylotype are rare anlong chemoautotrophic hosts. In gutless marine oligochetes 2 morphotypes of bacterial endosymbionts occur just below the cuticle between extensions of the epidermal cells. Using phylogenetic analysis, in situ hybridization, and denaturing gradient gel electrophoresis based on 16s ribosomal RNA genes, it is shown that in the gutless oligochete Olavius Ioisae, the 2 bacterial morphotypes correspond to 2 species of diverse phylogenetic origin. The larger symbiont belongs to the gamma subclass of the Proteobac- tend and clusters with other previously described chemoautotrophic endosymbionts. The smaller syrnbiont represents a novel phylotype within the alpha subclass of the Proteobacteria. This is distinctly cllfferent from all other chemoautotropl-uc hosts with symbiotic bacteria which belong to either the gamma or epsilon Proteobacteria. In addition, a third bacterial morphotype as well as a third unique phylotype belonging to the spirochetes was discovered in these hosts. Such a phylogenetically diverse assemblage of endosymbiotic bacteria is not known from other marine invertebrates.
    [Show full text]
  • Two Aquatic Oligochaete Species, Dero Dorsalis and Allonais Pectinata (Annelida: Clitellata: Naididae), New to Korea
    Anim. Syst. Evol. Divers. Vol. 30, No. 2: 119-123, April 2014 http://dx.doi.org/10.5635/ASED.2014.30.2.119 Short communication Two Aquatic Oligochaete Species, Dero dorsalis and Allonais pectinata (Annelida: Clitellata: Naididae), New to Korea Jeounghee Lee1, Jongwoo Jung1,2,* 1Division of EcoCreative, Ewha Womans University, Seoul 120-750, Korea 2Department of Science Education, Ewha Womans University, Seoul 120-750, Korea ABSTRACT The genera Dero and Allonais belong to the family Naididae. Most species in the genus Dero have unique morphological characters including a branchial fossa and/or gills at the posterior end of the body. The genus Allonais has no eyes unlike its close relative the genus Nais. Of these genera, one species of Dero, D. obtusa, was recently reported in Korea. However, the genus Allonais has not been recorded in Korea. Here, we report Dero dorsalis Ferronière, 1899 and Allonais pectinata (Stephenson, 1910) with a diagnosis and illustrations. Keywords: Dero dorsalis, Allonais pectinata, Naididae, Oligochaeta, Clitellata, Korea INTRODUCTION were kept cool and were sorted in the laboratory using a stereo- microscope while the worms were alive. Then, the samples Aquatic oligochaeta is one of the most abundant and ecologi- were preserved in 70% ethanol solution. The specimens were cally important groups in freshwater benthic environments stained with Rose Bengal dye for observations and measure- (Jung, 2011). Most species in this group are ⁄1 mm to a few ments and were temporarily mounted in glycerin. Pictures centimeters in length. This group contains several families. were taken with a BX 41 optical microscope (Olympus, Tokyo, Among them, naidid worms are small benthic and/or epiben- Japan) and an EOS 650D camera (Canon, Tokyo, Japan).
    [Show full text]
  • Annelida, Oligochaeta) from the Island of Elba (Italy)
    Org. Divers. Evol. 2, 289–297 (2002) © Urban & Fischer Verlag http://www.urbanfischer.de/journals/ode Taxonomy and new bacterial symbioses of gutless marine Tubificidae (Annelida, Oligochaeta) from the Island of Elba (Italy) Olav Giere1,*, Christer Erséus2 1 Zoologisches Institut und Zoologisches Museum, Universität Hamburg, Germany 2 Department of Invertebrate Zoology, Swedish Museum of Natural History, Stockholm Received 15 April 2002 · Accepted 9 July 2002 Abstract In shallow sublittoral sediments of the north-west coast of the Island of Elba, Italy, a new gutless marine oligochaete, Olavius ilvae n. sp., was found together with a congeneric but not closely related species, O. algarvensis Giere et al., 1998. In diagnostic features of the genital organs, the new species differs from other Olavius species in having bipartite atria and very long, often folded spermathecae, but lacking penial chaetae.The Elba form of O. algarvensis has some structural differences from the original type described from the Algarve coast (Portugal).The two species from Elba share characteristics not previously reported for gutless oligochaetes: the lumen of the body cavity is unusually constrict- ed and often filled with chloragocytes, and the symbiotic bacteria are often enclosed in vacuoles of the epidermal cells. Regarding the bacterial ultrastructure, the species share three similar morphotypes as symbionts; additionally, in O. algarvensis a rare fourth type was found.The diver- gence of the symbioses in O. algarvensis, and the coincidence in structural
    [Show full text]
  • Bellec Et Al.5)
    Chemosynthetic ectosymbionts associated with a shallow-water marine nematode Laure Bellec, Marie-Anne Cambon Bonavita, Stéphane Hourdez, Mohamed Jebbar, Aurélie Tasiemski, Lucile Durand, Nicolas Gayet, Daniela Zeppilli To cite this version: Laure Bellec, Marie-Anne Cambon Bonavita, Stéphane Hourdez, Mohamed Jebbar, Aurélie Tasiemski, et al.. Chemosynthetic ectosymbionts associated with a shallow-water marine nematode. Scientific Reports, Nature Publishing Group, 2019, 9 (1), 10.1038/s41598-019-43517-8. hal-02265357 HAL Id: hal-02265357 https://hal.archives-ouvertes.fr/hal-02265357 Submitted on 9 Aug 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. www.nature.com/scientificreports OPEN Chemosynthetic ectosymbionts associated with a shallow-water marine nematode Received: 30 October 2018 Laure Bellec1,2,3,4, Marie-Anne Cambon Bonavita2,3,4, Stéphane Hourdez5,6, Mohamed Jebbar 3,4, Accepted: 2 April 2019 Aurélie Tasiemski 7, Lucile Durand2,3,4, Nicolas Gayet1 & Daniela Zeppilli1 Published: xx xx xxxx Prokaryotes and free-living nematodes are both very abundant and co-occur in marine environments, but little is known about their possible association. Our objective was to characterize the microbiome of a neglected but ecologically important group of free-living benthic nematodes of the Oncholaimidae family.
    [Show full text]
  • The Relation of Tidal Height and Sediment Type to the Intertidal Distribution of Marine Oligochaetes in Coos Bay, Oregon
    AN ABSTRACT OF THE THESIS OF David Randall Strehiow for the degree of Master of Science in the School of Oceanography presentedon 3 May 1982 Title: The Relation of.Tidal Height and Sediment Type to the Inter- tidal Distributi Redacted for privacy Abstract approved: .J. Gonor The taxonomy of intertidal oligochaetès, and the relationships between oligochaete species distributions, tidal height, and sediment type, were studied in detail for a sand and mud flat in lower Coos Bay, Oregon. Eighteen species, representing four families, were identified. Three species of Enchytraeidae (Marionina vaucheriae, Marionina callianassae, and Marionina gpnori) and one species of Tubificidae (Aktedrilus oregpnensis) are new to science. A preliminary description of a new family, Psamotheriidae, based on Psarrrnotheriuni hastatus n.g. n.sp. is given. Other species present were Marionina vancouverensis, M. sjaelandica, N. subterranea, and N. achaeta (Enchytraeidae); Aktedrilus locyi, Li.mnodriloides monothecus, L. victoriensis, L. vérrucosus, Tubificoides coatesae, and T. pseudogaster (Tubificidae); and Paranais litoralis (Naididae). Individuals of Enchytraeus sp. and Lumbricillus spp. (Enchytraeidae) were found but were not fully mature, and therefore could not be identified to species. Nine of the eighteen species are known oniy from the northeast Pacific littoral zone, indicating the existence of a distinct regthnal oligochaete fauna. Earlier studies of the Enchytraeidae (Coates and Ellis 1981) and Tubificidae (Brinkhurst and Baker 1979) support this conclusion. Distinct oligochaete species assemblages were closely associated with physical habitat types defined by tidal exposure and sediment type. The distributions of species were not correlated with each other or with physical habitat types, however. Tide levels at which large changes in maximum continuous tidal exposure or submergence occur (critical tide levels) are strongly associated with.
    [Show full text]
  • Phylogenetic and Functional Characterization of Symbiotic Bacteria in Gutless Marine Worms (Annelida, Oligochaeta)
    Phylogenetic and functional characterization of symbiotic bacteria in gutless marine worms (Annelida, Oligochaeta) Dissertation zur Erlangung des Grades eines Doktors der Naturwissenschaften -Dr. rer. nat.- dem Fachbereich Biologie/Chemie der Universität Bremen vorgelegt von Anna Blazejak Oktober 2005 Die vorliegende Arbeit wurde in der Zeit vom März 2002 bis Oktober 2005 am Max-Planck-Institut für Marine Mikrobiologie in Bremen angefertigt. 1. Gutachter: Prof. Dr. Rudolf Amann 2. Gutachter: Prof. Dr. Ulrich Fischer Tag des Promotionskolloquiums: 22. November 2005 Contents Summary ………………………………………………………………………………….… 1 Zusammenfassung ………………………………………………………………………… 2 Part I: Combined Presentation of Results A Introduction .…………………………………………………………………… 4 1 Definition and characteristics of symbiosis ...……………………………………. 4 2 Chemoautotrophic symbioses ..…………………………………………………… 6 2.1 Habitats of chemoautotrophic symbioses .………………………………… 8 2.2 Diversity of hosts harboring chemoautotrophic bacteria ………………… 10 2.2.1 Phylogenetic diversity of chemoautotrophic symbionts …………… 11 3 Symbiotic associations in gutless oligochaetes ………………………………… 13 3.1 Biogeography and phylogeny of the hosts …..……………………………. 13 3.2 The environment …..…………………………………………………………. 14 3.3 Structure of the symbiosis ………..…………………………………………. 16 3.4 Transmission of the symbionts ………..……………………………………. 18 3.5 Molecular characterization of the symbionts …..………………………….. 19 3.6 Function of the symbionts in gutless oligochaetes ..…..…………………. 20 4 Goals of this thesis …….…………………………………………………………..
    [Show full text]
  • A Test of Monophyly of the Gutless Phallodrilinae (Oligochaeta
    A test of monophyly of the gutless Phallodrilinae (Oligochaeta, Tubificidae) and the use of a 573-bp region of the mitochondrial cytochrome oxidase I gene in analysis of annelid phylogeny JOHAN A. A. NYLANDER,CHRISTER ERSEÂ US &MARI KAÈ LLERSJOÈ Accepted 7 Setember 1998 Nylander, J. A. A., ErseÂus, C. & KaÈllersjoÈ , M. (1999) A test of monophyly of the gutless Phallodrilinae (Oligochaeta, Tubificidae) and the use of a 573 bp region of the mitochondrial cytochrome oxidase I sequences in analysis of annelid phylogeny. Ð Zoologica Scripta 28, 305±313. A 573-bp region of the mitochondrial gene cytochrome c oxidase subunit I (COI) of two species of Inanidrilus ErseÂus and four species of Olavius ErseÂus (Phallodrilinae, Tubificidae) is used in a parsimony analysis together with a selection of 35 other annelids (including members of Polychaeta, Pogonophora, Aphanoneura, and the clitellate taxa Tubificidae, Enchytraeidae, Naididae, Lumbriculidae, Haplotaxidae, Lumbricidae, Criodrilidae, Branchiobdellida and Hirudinea), and with two molluscs as outgroups. The data support the monophyly of the Olavius and Inanidrilus group, with a monophyletic Inanidrilus. However, parsimony jackknife analyses show that most of the other groups are unsupported by the data set, thus revealing a large amount of homoplasy in the selected gene region. Practically no information is given of within/between family relationships except for a few, closely related species. This suggests that the analysed COI region is not useful, when used alone, for inferring higher level relationships among the annelids. Johan A. A. Nylander, Department of Systematic Zoology, Evolutionary Biology Center, Uppsala University, NorbyvaÈgen 18D, SE-752 36 Uppsala, Sweden. Christer ErseÂus, Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden.
    [Show full text]
  • Annelida: Clitellata: Naididae) ⇑ Yingkui Liu A, Steven V
    Molecular Phylogenetics and Evolution 112 (2017) 244–257 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Multi-locus phylogenetic analysis of the genus Limnodrilus (Annelida: Clitellata: Naididae) ⇑ Yingkui Liu a, Steven V. Fend b, Svante Martinsson a, Xu Luo a, Akifumi Ohtaka c, Christer Erséus a, a Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30 Göteborg, Sweden b 17650 Kilkenny Rd., Los Gatos, CA 95030, USA c Department of Natural Science, Faculty of Education, Hirosaki University, Hirosaki, Aomori 036-8560, Japan article info abstract Article history: Limnodrilus species are annelid worms distributed worldwide in various freshwater sediments. The sys- Received 22 December 2016 tematics of Limnodrilus has chiefly been based on morphology, but the genus has not been subject to any Revised 24 March 2017 closer phylogenetic studies over the past two decades. To reconstruct the evolutionary history of Accepted 20 April 2017 Limnodrilus, and to assess the monophyly of this genus and its systematic position within the subfamily Available online 27 April 2017 Tubificinae (Annelida: Clitellata: Naididae), 45 Limnodrilus specimens, representing 19 species, and 35 other naidid species (representing 24 genera) were sampled. The data consisted of sequences of three Keywords: mitochondrial genes (COI, 12S and 16S rDNA) and four nuclear markers (18S and 28S rDNA, Histone 3, Oligochaetes and ITS). The phylogeny was estimated, using Maximum Likelihood and Bayesian analyses of concate- Clitellates Limnodrilus nated data of seven DNA loci, as well as a multi-locus coalescent-based approach. All analyses strongly Phylogeny suggest that Limnodrilus is monophyletic, but only if the morphospecies L.
    [Show full text]
  • Menemen-‹Zmir)
    TurkJZool 28(2004)183-197 ©TÜB‹TAK OligochaetaandAphanoneura(Annelida)Faunaofthe GedizDelta(Menemen-‹zmir) SüleymanBALIK,M.RuflenUSTAO⁄LU,SerayYILDIZ EgeUniversity,FisheriesFaculty,DepartmentofHydrobiology,35100Bornova,‹zmir-TURKEY Received:09.01.2003 Abstract: Thespecimenswerecollectedfrom16stationsbetweenFebruary1998andMay1999withtheaimofseasonally determiningtheOligochaetaandAphanoneurafaunaoftheGedizDelta.Thespecimensobtainedbycollectionofmudsampleswith anEkmangrabandeliminationwithafine500µmsievewerepreservedin4%formaldehydesolution. Atotalof47speciesweredetermined,comprising25speciesfromTubificidae,17speciesfromNaididae,3speciesfrom Enchytraeidaeand2speciesfromAeolosomatidae.Seventeenofthespeciesdeterminedarenewrecordsfortheinlandwaterfauna ofTurkey. KeyWords: Oligochaeta,Aphanoneura,Fauna,GedizDelta,‹zmir. GedizDeltas›’n›n(Menemen-‹zmir)OligochaetaveAphanoneura(Annelida)Faunas› Özet: GedizDeltas›’n›nOligochaetaveAphanoneurafaunas›n›belirlemekamac›yla,fiubat1998-May›s1999tarihleriaras›nda,16 istasyondanmevsimselörneklemeleryap›lm›flt›r.‹stasyonlardanal›nançamurörneklerinin500µmgözaç›kl›¤›ndakielekten geçirilmesiyleeldeedilenörnekler%4’lükformoldetespitedilmifltir. Örneklerinde¤erlendirilmesisonucunda,Tubificidaefamilyas›ndan25takson,Naididaefamilyas›ndan17takson,Enchytraeidae familyas›ndan3taksonveAeolosomatidaefamilyas›ndan2taksonolmaküzeretoplam47taksonsaptanm›flolup,bunlardan17’si Türkiyefaunas›içinilkdefabildirilmektedir. AnahtarSözcükler: Oligochaeta,Aphanoneura,Fauna,GedizDeltas›,‹zmir. Introduction faunaoftheGedizriversysteminastudyofTurkey’s
    [Show full text]
  • This Article Appeared in a Journal Published by Elsevier. the Attached
    This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/copyright Author's personal copy Molecular Phylogenetics and Evolution 57 (2010) 687–702 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Genetic variation and phylogeny of the cosmopolitan marine genus Tubificoides (Annelida: Clitellata: Naididae: Tubificinae) a,b, c a Sebastian Kvist ⇑, Indra Neil Sarkar , Christer Erséus a Department of Zoology, University of Gothenburg, Box 463, SE-405 30 Göteborg, Sweden b Richard Gilder Graduate School, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024, USA c Center for Clinical and Translational Science, Department of Microbiology & Molecular Genetics and Department of Computer Science, University of Vermont, 89 Beaumont Avenue, Given Courtyard N309, Burlington VT 05405, USA article info a b s t r a c t Article history: Prior attempts to resolve the phylogenetic relationships of the cosmopolitan, marine clitellate genus Received 15 February 2010 Tubificoides, using only morphology, resulted in unresolved trees.
    [Show full text]