Bryophytes from Tuxedni Wilderness Area, Alaska
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Molecular Phylogeny of Chinese Thuidiaceae with Emphasis on Thuidium and Pelekium
Molecular Phylogeny of Chinese Thuidiaceae with emphasis on Thuidium and Pelekium QI-YING, CAI1, 2, BI-CAI, GUAN2, GANG, GE2, YAN-MING, FANG 1 1 College of Biology and the Environment, Nanjing Forestry University, Nanjing 210037, China. 2 College of Life Science, Nanchang University, 330031 Nanchang, China. E-mail: [email protected] Abstract We present molecular phylogenetic investigation of Thuidiaceae, especially on Thudium and Pelekium. Three chloroplast sequences (trnL-F, rps4, and atpB-rbcL) and one nuclear sequence (ITS) were analyzed. Data partitions were analyzed separately and in combination by employing MP (maximum parsimony) and Bayesian methods. The influence of data conflict in combined analyses was further explored by two methods: the incongruence length difference (ILD) test and the partition addition bootstrap alteration approach (PABA). Based on the results, ITS 1& 2 had crucial effect in phylogenetic reconstruction in this study, and more chloroplast sequences should be combinated into the analyses since their stability for reconstructing within genus of pleurocarpous mosses. We supported that Helodiaceae including Actinothuidium, Bryochenea, and Helodium still attributed to Thuidiaceae, and the monophyletic Thuidiaceae s. lat. should also include several genera (or species) from Leskeaceae such as Haplocladium and Leskea. In the Thuidiaceae, Thuidium and Pelekium were resolved as two monophyletic groups separately. The results from molecular phylogeny were supported by the crucial morphological characters in Thuidiaceae s. lat., Thuidium and Pelekium. Key words: Thuidiaceae, Thuidium, Pelekium, molecular phylogeny, cpDNA, ITS, PABA approach Introduction Pleurocarpous mosses consist of around 5000 species that are defined by the presence of lateral perichaetia along the gametophyte stems. Monophyletic pleurocarpous mosses were resolved as three orders: Ptychomniales, Hypnales, and Hookeriales (Shaw et al. -
Hypnaceaeandpossiblyrelatedfn
Hikobial3:645-665.2002 Molecularphylo窪enyOfhypnobrJ/aleanmOssesasin化rredfroma lar淫e-scaledatasetofchlOroplastlbcL,withspecialre他rencetothe HypnaceaeandpOssiblyrelatedfnmilies1 HIRoMITsuBoTA,ToMoTsuGuARIKAwA,HIRoYuKIAKIYAMA,EFRAINDELuNA,DoLoREs GoNzALEz,MASANoBuHIGucHIANDHIRoNoRIDEGucHI TsuBoTA,H、,ARIKAwA,T,AKIYAMA,H,,DELuNA,E,GoNzALEz,,.,HIGucHI,M 4 &DEGucHI,H、2002.Molecularphylogenyofhypnobryaleanmossesasinferred fiPomalarge-scaledatasetofchloroplastr6cL,withspecialreferencetotheHypnaceae andpossiblyrelatedfamiliesl3:645-665. ▲ Phylogeneticrelationshipswithinthehypnobryaleanmosses(ie,theHypnales,Leuco- dontales,andHookeriales)havebeenthefbcusofmuchattentioninrecentyears Herewepresentphylogeneticinfierencesonthislargeclade,andespeciallyonthe Hypnaceaeandpossiblyrelatedftlmilies,basedonmaximumlikelihoodanalysisof l81r6cLsequences、Oursmdycorroboratesthat(1)theHypnales(sstr.[=sensu Vittl984])andLeucodontalesareeachnotmonophyleticentities、TheHypnalesand LeucodontalestogethercompriseawellsupportedsistercladetotheHookeriales;(2) theSematophyllaceae(s」at[=sensuTsubotaetaL2000,2001a,b])andPlagiothecia‐ ceae(s・str.[=sensupresentDareeachresolvedasmonophyleticgroups,whileno particularcladeaccommodatesallmembersoftheHypnaceaeandCryphaeaceae;and (3)theHypnaceaeaswellasitstypegenusノリDlwz"川tselfwerepolyphyletioThese resultsdonotconcurwiththesystemsofVitt(1984)andBuckandVitt(1986),who suggestedthatthegroupswithasinglecostawouldhavedivergedfiFomthehypnalean ancestoratanearlyevolutionarystage,fbllowedbythegroupswithadoublecosta (seealsoTsubotaetall999;Bucketal2000)OurresultsfiPomlikelihoodanalyses -
Mosses: Weber and Wittmann, Electronic Version 11-Mar-00
Catalog of the Colorado Flora: a Biodiversity Baseline Mosses: Weber and Wittmann, electronic version 11-Mar-00 Amblystegiaceae Amblystegium Bruch & Schimper, 1853 Amblystegium serpens (Hedwig) Bruch & Schimper var. juratzkanum (Schimper) Rau & Hervey WEBER73B. Amblystegium juratzkanum Schimper. Calliergon (Sullivant) Kindberg, 1894 Calliergon cordifolium (Hedwig) Kindberg WEBER73B; HERMA76. Calliergon giganteum (Schimper) Kindberg Larimer Co.: Pingree Park, 2960 msm, 25 Sept. 1980, [Rolston 80114), !Hermann. Calliergon megalophyllum Mikutowicz COLO specimen so reported is C. richardsonii, fide Crum. Calliergon richardsonii (Mitten) Kindberg WEBER73B. Campyliadelphus (Lindberg) Chopra, 1975 KANDA75 Campyliadelphus chrysophyllus (Bridel) Kanda HEDEN97. Campylium chrysophyllum (Bridel) J. Lange. WEBER63; WEBER73B; HEDEN97. Hypnum chrysophyllum Bridel. HEDEN97. Campyliadelphus stellatus (Hedwig) Kanda KANDA75. Campylium stellatum (Hedwig) C. Jensen. WEBER73B. Hypnum stellatum Hedwig. HEDEN97. Campylophyllum Fleischer, 1914 HEDEN97 Campylophyllum halleri (Hedwig) Fleischer HEDEN97. Nova Guinea 12, Bot. 2:123.1914. Campylium halleri (Hedwig) Lindberg. WEBER73B; HERMA76. Hypnum halleri Hedwig. HEDEN97. Campylophyllum hispidulum (Bridel) Hedenäs HEDEN97. Campylium hispidulum (Bridel) Mitten. WEBER63,73B; HEDEN97. Hypnum hispidulum Bridel. HEDEN97. Cratoneuron (Sullivant) Spruce, 1867 OCHYR89 Cratoneuron filicinum (Hedwig) Spruce WEBER73B. Drepanocladus (C. Müller) Roth, 1899 HEDEN97 Nomen conserv. Drepanocladus aduncus (Hedwig) Warnstorf WEBER73B. -
Liverworts, Mosses and Hornworts of Afghanistan - Our Present Knowledge
ISSN 2336-3193 Acta Mus. Siles. Sci. Natur., 68: 11-24, 2019 DOI: 10.2478/cszma-2019-0002 Published: online 1 July 2019, print July 2019 Liverworts, mosses and hornworts of Afghanistan - our present knowledge Harald Kürschner & Wolfgang Frey Liverworts, mosses and hornworts of Afghanistan ‒ our present knowledge. – Acta Mus. Siles. Sci. Natur., 68: 11-24, 2019. Abstract: A new bryophyte checklist for Afghanistan is presented, including all published records since the beginning of collection activities in 1839 ‒1840 by W. Griffith till present. Considering several unidentified collections in various herbaria, 23 new records for Afghanistan together with the collection data can be added to the flora. Beside a new genus, Asterella , the new records include Amblystegium serpens var. serpens, Brachythecium erythrorrhizon, Bryum dichotomum, B. elwendicum, B. pallens, B. weigelii, Dichodontium palustre, Didymodon luridus, D. tectorum, Distichium inclinatum, Entosthodon muhlenbergii, Hygroamblystegium fluviatile subsp. fluviatile, Oncophorus virens, Orthotrichum rupestre var. sturmii, Pogonatum urnigerum, Pseudocrossidium revolutum, Pterygoneurum ovatum, Schistidium rivulare, Syntrichia handelii, Tortella inflexa, T. tortuosa, and Tortula muralis subsp. obtusifolia . Therewith the number of species increase to 24 liverworts, 246 mosses and one hornwort. In addition, a historical overview of the country's exploration and a full biogeography of Afghan bryophytes is given. Key words: Bryophytes, checklist, flora, phytodiversity. Introduction Recording, documentation, identification and classification of organisms is a primary tool and essential step in plant sciences and ecology to obtain detailed knowledge on the flora of a country. In many countries, such as Afghanistan, however, our knowledge on plant diversity, function, interactions of species and number of species in ecosystems is very limited and far from being complete. -
Field Guide to the Moss Genera in New Jersey by Keith Bowman
Field Guide to the Moss Genera in New Jersey With Coefficient of Conservation and Indicator Status Keith Bowman, PhD 10/20/2017 Acknowledgements There are many individuals that have been essential to this project. Dr. Eric Karlin compiled the initial annotated list of New Jersey moss taxa. Second, I would like to recognize the contributions of the many northeastern bryologists that aided in the development of the initial coefficient of conservation values included in this guide including Dr. Richard Andrus, Dr. Barbara Andreas, Dr. Terry O’Brien, Dr. Scott Schuette, and Dr. Sean Robinson. I would also like to acknowledge the valuable photographic contributions from Kathleen S. Walz, Dr. Robert Klips, and Dr. Michael Lüth. Funding for this project was provided by the United States Environmental Protection Agency, Region 2, State Wetlands Protection Development Grant, Section 104(B)(3); CFDA No. 66.461, CD97225809. Recommended Citation: Bowman, Keith. 2017. Field Guide to the Moss Genera in New Jersey With Coefficient of Conservation and Indicator Status. New Jersey Department of Environmental Protection, New Jersey Forest Service, Office of Natural Lands Management, Trenton, NJ, 08625. Submitted to United States Environmental Protection Agency, Region 2, State Wetlands Protection Development Grant, Section 104(B)(3); CFDA No. 66.461, CD97225809. i Table of Contents Introduction .................................................................................................................................................. 1 Descriptions -
Skeleton to Rarely Branched (Mostly Acrocarpous) Mosses
Skeleton to Rarely Branched (mostly acrocarpous) Mosses Revised through 23 July 2012 Reminder: a dagger (†) indicates that not all of the species within the given genus have the character(s) defining that Group. Group A1 – Shoots flattened or angular, i.e., not round Group A1 Acaulon† Distichium Paludella Aulacomnium† Erpodium Plagiomnium Bryoxiphium Fissidens Schistostega Catoscopium Meesia† Triquetrella Conostomum Group A2 – Shoots julaceous both wet and dry Group A2 Anomobryum Bryum† Plagiobryum Aongstroemia Conostomum Pleuridium† Aulacomnium† Group A3 – Stems densely tomentose Group A3 Anacolia Dicranum† Rhizomnium† Aulacomnium† Paludella Scopelophila† Cinclidium Polytrichum† Zygodon† Group A4 – Stems red Group A4 Anacolia Cinclidium Pohlia† Anomobryum Epipterygium Rhizomnium† Aongstroemia Mnium† Roellia Blindia Philonotis† Trachycystis Bryum† Plagiobryum Group A5 – Leaves squarrose-recurved Group A5 Barbula† Paludella Tortula† Dicranella† Pleurochaete Trichodon Didymodon† Rhexophyllum Triquetrella Leptodontium Group A6 – Leaves falcate-secund Group A6 Andreaeobryum Dicranum† Paraleucobryum† Dicranella† Kiaeria† 2 Group A7 – Leaves subulate / setaceous Group A7 Anacolia Dicranella† Orthodontium† Archidium† Dicranodontium Paraleucobryum Arctoa Dicranoweisia Pleuridium† Bartramia† Dicranum† Pseudoditrichum Blindia Ditrichum† Pyrrhobryum Brachydontium Eccremidium Seligeria† Brothera Kiaeria Symblepharis Bruchia† Leptobryum Trematodon† Campylopus† Oncophorus† Trichodon Group A8 – Leaves dimorphic Group A8 Epipterygium Erpodium Group A9 -
Flora of New Zealand Mosses
FLORA OF NEW ZEALAND MOSSES TIMMIACEAE A.J.FIFE Fascicle 29 – OCTOBER 2016 © Landcare Research New Zealand Limited 2016. Unless indicated otherwise for specific items, this copyright work is licensed under the Creative Commons Attribution 4.0 International license Attribution if redistributing to the public without adaptation: “Source: Landcare Research” Attribution if making an adaptation or derivative work: “Sourced from Landcare Research” See Image Information for copyright and licence details for images. CATALOGUING IN PUBLICATION Fife, Allan J. (Allan James), 1951- Flora of New Zealand [electronic resource] : mosses. Fascicle 29, Timmiaceae / Allan J. Fife. -- Lincoln, N.Z. : Manaaki Whenua Press, 2016. 1 online resource ISBN 978-0-947525-01-9 (pdf) ISBN 978-0-478-34747-0 (set) 1.Mosses -- New Zealand -- Identification. I. Title. II. Manaaki Whenua-Landcare Research New Zealand Ltd. UDC 582.344.852(931) DC 588.20993 DOI: 10.7931/B1SG68 This work should be cited as: Fife, A.J. 2016: Timmiaceae. In: Breitwieser, I.; Wilton, A.D. Flora of New Zealand - Mosses. Fascicle 29. Manaaki Whenua Press, Lincoln. http://dx.doi.org/10.7931/B1SG68 Cover image: Timmia norvegica, shoot. Drawn by Rebecca Wagstaff from A.J. Fife 8478, CHR 464718. Contents Introduction..............................................................................................................................................1 Taxa Timmiaceae ..................................................................................................................................... -
Arctic Biodiversity Assessment
310 Arctic Biodiversity Assessment Purple saxifrage Saxifraga oppositifolia is a very common plant in poorly vegetated areas all over the high Arctic. It even grows on Kaffeklubben Island in N Greenland, at 83°40’ N, the most northerly plant locality in the world. It is one of the first plants to flower in spring and serves as the territorial flower of Nunavut in Canada. Zackenberg 2003. Photo: Erik Thomsen. 311 Chapter 9 Plants Lead Authors Fred J.A. Daniëls, Lynn J. Gillespie and Michel Poulin Contributing Authors Olga M. Afonina, Inger Greve Alsos, Mora Aronsson, Helga Bültmann, Stefanie Ickert-Bond, Nadya A. Konstantinova, Connie Lovejoy, Henry Väre and Kristine Bakke Westergaard Contents Summary ..............................................................312 9.4. Algae ..............................................................339 9.1. Introduction ......................................................313 9.4.1. Major algal groups ..........................................341 9.4.2. Arctic algal taxonomic diversity and regionality ..............342 9.2. Vascular plants ....................................................314 9.4.2.1. Russia ...............................................343 9.2.1. Taxonomic categories and species groups ....................314 9.4.2.2. Svalbard ............................................344 9.2.2. The Arctic territory and its subdivision .......................315 9.4.2.3. Greenland ...........................................344 9.2.3. The flora of the Arctic ........................................316 -
Plant Cover and Environment of Steep Hillsides in Pite Lappmark
ACTA PHYTOGEOGRAPHICA SUECICA 53 EDIDIT SVENSKA VAXTGEOGRAFISKA SALLSKAPET Plant Cover and Environment of Steep Hillsides in Pite Lappmark By Jim Lundqvist UPPSALA 1968 ALMQVIST & WIKSELLS BOKTRYCKERI AB ACTA PHYTOGEOGRAPHICA SUECICA 53 Plant Cover and Environment of Steep Hillsides in Pite Lappmark avec un resume en francais By Jim Lundqvist By due permission of the Faculty of Science of the University of Uppsala to be publicly discussed at the Institute of Ecological Botany (Vaxtbiologiska I nstitutionen), on May 24, 1968, at 10 a.m., for the degree of Doctor of Philosophy UPPSALA 1968 Illustrations printed with contribution from Langmanska Kulturfonden Printed in Sweden by Almqvist & Wiksells Boktryckeri AB Uppsala 1968 To the Memory of my Mother CONTENTS PREFACE 7 THERMOPHILOUS PLANT COMMUN ITIES OUTSIDE THE HILLSIDE ECOSYSTEM ...10 3 INTRODUCT£0 9 The flora and vegetation of the Merk Gorge . 103 The flora and vegetation in an old river valley 105 ENVIRONMENT 13 Concluding remarks on the study of the ve- getation . 106 Introductory remarks . 13 Altitude . .. 14 HILLSI DES LOCATED IN THE CALEDONIAN 15 Bedrock and soil . AREA . 107 The development of talus slopes 15 The chemical properties of the bedrock and the 1. Mt. Akkapakte . 107 soil ......... 18 2. Mt. E Ramanpakte 108 Local climate and sun exposure . 29 3. Mt. W Ramanpakte 108 Introduction . 29 4. Paktesuolo . 109 Measuring methods and gauges. Sources of 5. Mt. Ardnapakte 109 error ........... 32 6. Mt. Kebnevare . 110 The radiation climate of mountain slopes 33 7. Mt. Kaldopakte 111 The thermometer screens and their placing . 36 8. Mt. Jokkokvarats . 111 Monthly mean temperatures of the stations and 9. -
Twenty of the Most Thermophilous Vascular Plant Species in Svalbard and Their Conservation State
Twenty of the most thermophilous vascular plant species in Svalbard and their conservation state Torstein Engelskjøn, Leidulf Lund & Inger Greve Alsos An aim for conservation in Norway is preserving the Svalbard archi- pelago as one of the least disturbed areas in the Arctic. Information on local distribution, population sizes and ecology is summarized for 20 thermophilous vascular plant species. The need for conservation of north- ern, marginal populations in Svalbard is reviewed, using World Conser- vation Union categories and criteria at a regional scale. Thirteen species reach their northernmost distribution in Svalbard, the remaining seven in the western Arctic. Nine species have 1 - 8 populations in Svalbard and are assigned to Red List categories endangered or critically endangered: Campanula rotundifolia, Euphrasia frigida, Juncus castaneus, Kobresia simpliciuscula, Rubus chamaemorus, Alchemilla glomerulans, Ranuncu- lus wilanderi, Salix lanata and Vaccinium uliginosum, the last four spe- cies needing immediate protective measures. Five species are classifi ed as vulnerable: Betula nana, Carex marina ssp. pseudolagopina, Luzula wahlenbergii, Ranunculus arcticus and Ranunculus pallasii. Six species are considered at lower risk: Calamagrostis stricta, Empetrum nigrum ssp. hermaphroditum, Hippuris vulgaris (only occurring on Bjørnøya), Juncus triglumis, Ranunculus lapponicus and Rhodiola rosea. The warmer Inner Arctic Fjord Zone of Spitsbergen supports most of the 20 target species and is of particular importance for conservation. Endan- gered or vulnerable species were found in a variety of edaphic conditions; thus, several kinds of habitats need protection. T. Engelskjøn, I. G. Alsos, Tromsø Museum, University of Tromsø, NO-9037 Tromsø, Norway, torstein@ tmu.uit.no; L. Lund, Phytotron, University of Tromsø, NO-9037 Tromsø, Norway. -
Volume 1, Chapter 3-1: Sexuality: Sexual Strategies
Glime, J. M. and Bisang, I. 2017. Sexuality: Sexual Strategies. Chapt. 3-1. In: Glime, J. M. Bryophyte Ecology. Volume 1. 3-1-1 Physiological Ecology. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 3 June 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 3-1 SEXUALITY: SEXUAL STRATEGIES JANICE M. GLIME AND IRENE BISANG TABLE OF CONTENTS Expression of Sex ......................................................................................................................................... 3-1-2 Unisexual and Bisexual Taxa ........................................................................................................................ 3-1-2 Sex Chromosomes ................................................................................................................................. 3-1-6 An unusual Y Chromosome ................................................................................................................... 3-1-7 Gametangial Arrangement ..................................................................................................................... 3-1-8 Origin of Bisexuality in Bryophytes ............................................................................................................ 3-1-11 Monoicy as a Derived/Advanced Character? ........................................................................................ 3-1-11 Multiple Reversals .............................................................................................................................. -
Molecular Phylogenetics of Mosses and Relatives
MOLECULAR PHYLOGENETICS OF MOSSES AND RELATIVES! by! Ying Chang! ! ! A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF ! DOCTOR OF PHILOSOPHY! in! The Faculty of Graduate Studies! (Botany)! ! ! THE UNIVERSITY OF BRITISH COLUMBIA! (Vancouver)! July 2011! © Ying Chang, 2011 ! ABSTRACT! Substantial ambiguities still remain concerning the broad backbone of moss phylogeny. I surveyed 17 slowly evolving plastid genes from representative taxa to reconstruct phylogenetic relationships among the major lineages of mosses in the overall context of land-plant phylogeny. I first designed 78 bryophyte-specific primers and demonstrated that they permit straightforward amplification and sequencing of 14 core genes across a broad range of bryophytes (three of the 17 genes required more effort). In combination, these genes can generate sturdy and well- resolved phylogenetic inferences of higher-order moss phylogeny, with little evidence of conflict among different data partitions or analyses. Liverworts are strongly supported as the sister group of the remaining land plants, and hornworts as sister to vascular plants. Within mosses, besides confirming some previously published findings based on other markers, my results substantially improve support for major branching patterns that were ambiguous before. The monogeneric classes Takakiopsida and Sphagnopsida likely represent the first and second split within moss phylogeny, respectively. However, this result is shown to be sensitive to the strategy used to estimate DNA substitution model parameter values and to different data partitioning methods. Regarding the placement of remaining nonperistomate lineages, the [[[Andreaeobryopsida, Andreaeopsida], Oedipodiopsida], peristomate mosses] arrangement receives moderate to strong support. Among peristomate mosses, relationships among Polytrichopsida, Tetraphidopsida and Bryopsida remain unclear, as do the earliest splits within sublcass Bryidae.