Hikobial3:645-665.2002

Molecularphylo窪enyOfhypnobrJ/aleanmOssesasin化rredfroma lar淫e-scaledatasetofchlOroplastlbcL,withspecialre他rencetothe HypnaceaeandpOssiblyrelatedfnmilies1

HIRoMITsuBoTA,ToMoTsuGuARIKAwA,HIRoYuKIAKIYAMA,EFRAINDELuNA,DoLoREs GoNzALEz,MASANoBuHIGucHIANDHIRoNoRIDEGucHI

TsuBoTA,H、,ARIKAwA,T,AKIYAMA,H,,DELuNA,E,GoNzALEz,,.,HIGucHI,M 4 &DEGucHI,H、2002.Molecularphylogenyofhypnobryaleanmossesasinferred fiPomalarge-scaledatasetofchloroplastr6cL,withspecialreferencetotheHypnaceae andpossiblyrelatedfamiliesl3:645-665.

▲ Phylogeneticrelationshipswithinthehypnobryaleanmosses(ie,theHypnales,Leuco- dontales,andHookeriales)havebeenthefbcusofmuchattentioninrecentyears Herewepresentphylogeneticinfierencesonthislargeclade,andespeciallyonthe Hypnaceaeandpossiblyrelatedftlmilies,basedonmaximumlikelihoodanalysisof l81r6cLsequences、Oursmdycorroboratesthat(1)theHypnales(sstr.[=sensu Vittl984])andLeucodontalesareeachnotmonophyleticentities、TheHypnalesand LeucodontalestogethercompriseawellsupportedsistercladetotheHookeriales;(2) theSematophyllaceae(s」at[=sensuTsubotaetaL2000,2001a,b])andPlagiothecia‐ ceae(s・str.[=sensupresentDareeachresolvedasmonophyleticgroups,whileno particularcladeaccommodatesallmembersoftheHypnaceaeandCryphaeaceae;and (3)theHypnaceaeaswellasitstypegenusノリDlwz"川tselfwerepolyphyletioThese resultsdonotconcurwiththesystemsofVitt(1984)andBuckandVitt(1986),who suggestedthatthegroupswithasinglecostawouldhavedivergedfiFomthehypnalean ancestoratanearlyevolutionarystage,fbllowedbythegroupswithadoublecosta (seealsoTsubotaetall999;Bucketal2000)OurresultsfiPomlikelihoodanalyses ofalarger6cLdatasetconfinnthesuggestionbysmallerdatasetsfiommultipleloci firstbyDeLunaetal.(2000)andthenBucketaL(2000)thatthereisnoevidencefbr supportingtheHypnales(sstr.[=sensuVittl984])andLeucodontales・Adetailed reconsiderationofordinalclassihcationandfnmilialclassificationwithintheHyp- nidaeisnownecessary.

KeyWords:HypnalesLeucodontales,,hypnobryaleanmosses,molecular phylogeny,r6cLlargedataset,,,Plagiotheciaceae,Am- blystegiaceae

。 肋D'"j7M6o/qdMrノノ℃"MDeg"chj,Depα""ze"tq/Bjo/ogjcα/Sbje"Ce,Grad"α/e Sb/ioo/q/血e"Ce,Ⅲ℃sノカ〃α〔ノノjjvelM1ノ,hgamli〕ノα碗αノー3-/,〃jgZJSルノーハjrosノi〃α- W,ノブIノ・Csノi〃α739-852.ノヒW/L 7bmojiFz`9MノWmwq,Depαノブ'"e"'0/Bjo/Ogjcα/Sbje"C&F,G7α`"α/e此/IOC/q/mie"Ce, U>フルe'Mワノq/mtyo,〃O'7907-3-/,βz"7/bノo-k"’7bノb′o川-0033,上pα"・ 航rqMEMノhi〕′α',、,/Mlsal''1q/ノVb【/"'℃α'z`ノ仙加α'Mα〃jrjes,町ogo,YZlO′ojgaoAa 6-cho"ze,5位"dtJ-sAj,Hyogo669-/ゴイdノヒZpα〃 〃αmDeL""α&DC/oresOo'1Z。/ez,DePartame"jMeSM伽/jcaリノセge/αMMmto c/eEco/ogmlAC.,XMJpa,比7.9/000,MdXjco、 MJSα"06〃fノノgZlcAj,Depα"me"/q/DC/αノリMJ/jolZα/比je"ceM`Sc"〃,伽αAr"60 イー/-ImM"6α-sルノ,仏aMhH305-000LノヒZpα",DEPα"ノ?Te"/q/Bio/ogjcα/S℃/e"CGS, G/ndZJα/e比ノioo/q/此je"Ce,U>7〃e′Mワノq/、oノb′0,肋"go7~3-/,B2`"ノtyo-ノ1W,Tbノbノ。 〃3-0033,上pα〃 'ContributionfiOmtheLaboratolyofPlantTaxonomyandEcology,HiroshimaUniversity・NSer・No.S2L 646 HikobiaVoll3,No.4,2002

Introduction talesandHookeriales)fbrcorroborationofthe phylogenetichypothesisofDeLunaetal.(2000) Thehypnobryaleanmosses,includingtheor- andBucketaL(2000);3)toclarifythefiamilial dersHypnales,LeucodontalesandHookeriales, relationships,especiallybetweentheHypnaceae areoneofthemostdiversifiedmossgroups、 andrelatedfamilies,suchastheSematophylla- Attentionhasbeenpaidtotheclassiflcationof ceaeandPlagiotheciaceae,withinthehypnobly- thehypnobryaleanmossessinceVitt(1984)pro‐ aleanmosses,giventhattheLeucodontalesand videdanewsystemfbrtheBryopsida、Within Hypnalesarenotmonophyletic;and4)totracein thepleurocarpshesuggestedthat“adoublecosta thephylogenythetransitionsofthecostafiDm ll groupasrepresentedbytheHypnaceae,Selnato- singletodouble,oneoftheimportantcharacters phyllaceaeandEntodontaceae,isdivergentfiDm fbrthefiamilialclassificationofthehypnobry- 0 agroupwithasinglecosta,whichcanbere- aleanmosses、 gardedastbemostrecentevolutionarystageof Recent,molecularphylogeneticanalysesfbr theorderHypnales(seealsoTsubotaetall999; pleurocarpousmosseswerebasedonr6cLse- Bucketal2000)Subsequently,BuckandVitt quencesalongwithotherdatasets,suchasamB,  ̄ (1986)constluctedanotherclassificationfbrhyp- 伽L-Fandノアs4Atthepresenttime,tbere- noblyaleanmossesbasedonmorphologicaland sourcesofr6cLsequencesarethemostcompre- ecologicaldata、 hensivesamplingfbrthehypnaleanmosses・ Inrecentyears,phylogeneticrelationships Alignmentofthe'6cLsequencesisalsoeasybe- withinthehypnobryaleanmosseshavebeenthe causeoftheirdistinctionasaprotein-codingre‐ fbcusofmucbattentionatseveraltaxonomiclev- gioninthecodonpositions・Sqwepresenthere els(Arikawa&Higuchil999,2002;BucketaL pbylogeneticin化rencesfbrthethreeordersHyp- 2000;DeLuna&coworkersl999,2000;Maeda nales,LeucodontalesandHookeriales,basedon etaL200qTsubota&coworkersl999,2000, themaximum-likelihood(ML)analysesofl81 2001a,b;VanderpoortenetaL2002).Tberela- sequencesofthechloroplastribulosel,5-bisphos- tionshipswithinthehypnobryaleanmosseshave phatecarboxylase/oxygenaselargesubunit beenevaluatedbybothmorphologyandmolecu- (r6cL),togetherwithrecentinfbnnationonthe larstudies(Hedeniisl995;DeLunaetaL1999). molecularphylogenyofhypnobryaleanmosses, Hedeniis(1995,1996)showedthemonophylyof anddiscusstheimplicationsofourfindingson theHookeriales-Sematophyllaceaeanddiscov- theHypnaceaeandtheirrelatedfamilies. eredtheLeucodontalesasagradetaxonbasedon morphologica1data、DeLunaetaL(1999)clari- Materialsandmethods fledthehomologyofpleurocarpyandthemono- phylyofallhypnobryaleanpleurocarpousmosses Phylogeneticanalysesbasedonther6cLgene (theLeucodontales,HypnalesandHookeriales), sequenceswerebasicallyperfbnnedfbllowing basedonacombined'6cLsequencesandmor- Tsubotaandcoworkers(1999,2000,2001a,b). phologydataset・Furtherdetailswererecently Themethodconsistsoftwosteps:Dobtaining の revealedbyDeLunaetaL(2000)andBucketal. sequencedata(DNAextractionPCRamplifica- (2000)whoproposednewphylogeneticrelation- tionandDNAsequencing,orDNAdatabaseho- shipswithinthesepleurocarpsTheseworks mologysearch);and2)dataanalyses. suggestedthattheLeucodontalesandHypnalesas previouslyunderstoodarenotmonophyletic 8℃"7calα"c/P/α"rMJZerjaん Familiesfromthesetwoordersaremixedina Atotalofl81mossspecieswereexaminedfbr singlelargecladesistertothehookerialeanlin- theanalysesasshowninTablelandinAppendix eage、 A・Thelattercontainsvoucherinfbmationand Theobjectivesofthisstudyare:l)toconstruct DNADatabaseAccessionNos・Voucherspeci- aphylogenetictreefbrhypnobryaleanmosses menssequencedinthepresentsmdyweredepos- basedonlarge-scaledataset;2)totestthemono- itedi、TNS,HYo,orHIRoSomesequencesused phylyofthethreeorders(,Leucodon- fbrtheanalyseswerealsoobtainedfi・omthe DNAdatabase. HIsuBoTA,T・ARIKAwA,H・AKlYAMA,EDELuNA,D、OoNzALEz,MHIGucHIANDH、DEGucHI 647

TableLListofspeciesandftlmiliesinvestigatedlbrl6cLgenewiththeaccessionnumberandvoucheror referenceofthesequences、TreatmentoffamiliesinthistablefbllowsVitt(1984)withsomemodificationsby BuckandVitt(1986).FurtherinfbnnationfbrthesequencesobtainedinthepresentsmdyisshowninAppendix A、

OrdelプFamiIv/SDccies AccessionNo. Refcrcnccs/Origin HypnaleS(s・stⅨ) Hypnodendraceac A0lp"ocノセ"cjWmel2zjesjj(Hook.)Paris AF23IO93 MishIcrctal(onIyinDNA database) PIeuroziopsidaceae 雄"mzjqpsな'wノノze"たα(Weinm.)Kindb・cxBritt、 ABO24683 ArikawaamdHiguchi(19”) Fontinalaceac Fo"""α/jFampW℃"cqHedw ABO50949 msubotaetaL(2001a) 。 Fb"'j"αノ応α"伽ノア'eZjcqHedw、 AJ275183 Coxctal(2000) Fb"/、αノノS“んcar/jcaBruch&Schimp・ AF231074 DeLunaetaL(2000) Echinodiaceae Ebノクmodmll2〃"61℃s"'?z(Mitt.)A・JaCgcr AF233568 DcLunaetal(2000) Sbmrommm〃jcosjcJm”(SulL)Mitt、 ABO24677 Arikawa&Higuchi(1999) j6jerj"eノノヒJa6jerj"α(Hedw.)M・Fleisch AFOO5519 Goffinctctal(1998) 71ノカ、とノノ"mcノセノjcammm(Hedw)Schimp、 AFI58177 DcLunactaL(2000) 71lb、ヒノmmplな'ocaOMMUⅡ、HaL)AJacgcr ABO714I6 TSubotactal(200lb) nh"、11"〃だcqg"""伽(Hedw.)Lindb. ABO19476 Akiyamactal.(2000;only inDNAdatabascXmsubota etal(2001a) Lcskcaceae Bom〃αmj"e"ノノ(Broth.)Cardot ABO24963 TBubotactal(1999) Dm/tieノノヒJSpecjosjFsjmqBrothexCardot ABOl9467 Akiyamaetal.(2000;only inDNAdatabasc);thiSstudy M〕′αbeαノリw"CeノノヒJ(Mitt.)Broth ABOl9475 Maedaetal(2000) OAcJm皿池eahaAo"je"sjs(Mitt.)Broth ABOI9477 Macdactal(2000) Amblystegiaceac CtJ"je堰o"eノノヒJc"sp此mね(Hedw.)Loeske ABO24678 Arikawa&Higuchi(1999) C'、o"e"'℃"〃cj'、"(Hedw)Spruce ABO95270 thisstudy D'℃pα"ocmdi`sadi`"c"s(Hcdw.)Warnst. ABO24681 Arikawa&Higuchi(1999) fbイ91℃α''161lWegj"〃'e'、x(Hedw.)Jcnn AF233565 DeLunactal.(2000) Doノノcノカo、"rjqpsjM1ve応施'mな(Mitt.)Nog ABOI9465 Akiyamactal(2000;only inDNAdatabasc);thisstudy Le"16qpノM/""'cノル"/Sm"?(Hookf&Wilson)Lindb, AF233570 DeLunactal.(2000) StcreophyIlaceac EmodO"'qpsハノBHCOS/2gα(Brid.)WRBuck&lreland ABO24635 Arikawa&Higuchi(1999) S1e花qpノ!)ノノノ"加沢adIczjノCs"、(Hook)MitL ABO24637 Arikawa&Higuchi(1999) Fabroniaceae A"αcα'Modb"spmch"o雄s(FroeLexBrid.)Brid AF231077 DeLunaetal.(2000) 〃ビノノcodO"""maJpjノノヒJ”(Hcdw)AJaeger AF23357] DeLunaetal.(2000) Brachythcciaccac Bmc〃んecj"mp肋、Cs"、(Hedw.)Schimp、 AF233566 DeLunactaL(2000) Bmcノi〕ノノルecj"mrjw`ノα”Schimp ABO24674 A「ikawa&Higuchi(1999) Bmc/Mhecmmsα/e6ms"、(HofYinexRWCber& AFl58I76 DeLunaetal(2000) DMohr)Schimp・ ノMb'Hmcノadtwcmmowjczjj(Borszcz.)Stcere&Schof ABO29389 Tsubotactal.(1999) Pノロリノ!〕や"jdm加吻α"o/“s(Hedw.)Dix, ABO29385 Tmbotactal(1999) PseWdOsc化mpodmmpⅢ'wm(Hcdw.)M・F1cisch. AF233567 DCLunaCtal(2000) R/i)′"c/zos/egm"'pαノノノ。!/bノノz`"1(Mitt.)AJacgcr ABO24944 Tsubotactal(1999) 7bme"卯""〃〃/花"s(Hedw.)Loeske ABO24676 ArikawaandHiguchi(1999) Entodontaccae E7Troc!O〃cノカαノノelZgelj(Paris)Cardot ABO50993 TBubotaetal.(2001a) E)?/odb"/”jm4s(Gri征)AJacgcr ABO50994 T1subotactaL(2001a) 勘/odO""!)'”“(Hook)Hampe ABO24640 Arikawa&Higuchi(1999) EmodO"'w6jc""c/bイs(Mitt.)AJacger&Sauerb・ ABO29386 T1subotaetal(1999) EmodO〃sca61j血"sLindb ABO50995 TEubotaetal(200]a) Sematophyllaccae 化α"'んoW2〕''7chjzmzpqpj/、'"、(Ilarv.)M・Fleisch ABO51224 辰msubotactal(2001a) 化mpo"zイmpzmge"s(Hedw.)Broth AF233572 DcLunaetal(2000) jcmporm〃s"α、j"e瓦加(Reinw.&Homsch)M・Flcisch. ABO5I225 T1subotactal(2001a) 648 HikobiaVoLl3,No.4,2002

TableLcontinued

OrderプFamilv/SDccies AccessionNo. Rcfercnccs/or 、

幼ID'cノカeノノZzgノomelmqpmpqg"ノ娩'α(Tbyama)Scki ABO5I2I7 TmbotactaL(200Ia 」5ノセノempノリノノノノ""1〃"e(Hook.)M・F1cisch ABO51218 T3ubotaetaL(2001a ノ5leZemp/q〕ノノノノⅢ、〃e"Taros皿"ZBrothcxPLdelaVardc&Th6m ABO29391 T1subotactaL(1999) KsocノUdjeノノヒ73脚”"ノヒJrな(Dixon)BC・T1an&Mohamcd ABO39784[asⅣeacm‐ T1subotactal(2000) porm"Z加gEノノ(/を'W"?] Mtzsjqpo"zap皿ノCheノノヒJ(Herzog)incd ABO71410[asms- Tsubotactal.(200lb) megjsljap"ノb〃eノノヒJ] MJslqpollzas皿lWZ/blwllzHorik&Ando ABO7I4Il T1subotactaI.(200lb) ノMJS'qpo"Tα皿"cj"(/bノ、"'(Broth)Broth ABO71412 T1subotactaI.(200lb) Mbjoノノiecj"mmJcrocα'p"、(Hook)Mitt. ABO5I223 Tmbotactal(2001a) P(Jpj"jdiqpsなmacmsZjaq(Broth.&Paris)W,RBuck& ABO51220[asRhqpルノヒノO‐ Tmbotactal.(2001a) B・Cmlan s'jc/lwmmac'・Cs"c/"、] 応e"do"jm7TegjSjjaⅢ"。iイノ、α(Broth&M・Yasuda)HAkya. ABO51229[asnjs- Tmbotactal.(2001a) ロ &Tsubota megjs"α皿"。!`ノ、α] DノヒJな/αdblpノiQco"qpm"α'α(Reimers&Sakurai) ABO39785[asBm‐ T1subotactaI.(2000) WRBuck ノノ『e”ぬCO"2p/α"α`α] ll)ノノ、、α`/blpノlα/2mrjej(BcschcxCardot)WRBuck ABO39786[asBm‐ Tmbotactal.(2000)

ノノze”ノノα/Zmrjej] 画 けノヒ』な、。b(りんαノカe"o"〃(Duby)WRBuck AB029167[asBro‐ mSubotaetal.(1999) /he肥/ね/ie"o"ノノ] RyノヒJjSmde

Rノリノノノ“α`、IDノmMZpo"jcⅢs(Reimcrs)Tl・Kop ABO39788 msubotaetaL(2000) □ R/Mjdm火lIph"sノo1℃"s(Hcdw.)Wamst. ABO24666 Arikawa&Higuchi(1999) R/Mjdm“lIpノiWss9"qrmmJs(Hcdw.)Warnst. ABO24667 Arikawa&lliguchi(1999) R/Mjdmdblph"s〃""eノノWS(Hedw)Wamst・ ABO24668 Arikawa&HiguchiO999) Plagiothcciaccae LsqpZeノフイgjqpsjS"me比rjα"a(Schimp)Z・Iwats・ ABl34942 Arikawa&lliguchi(2002) Pmgjo'Aecj"、。b"'た"/、"、(Hedw)Schimp. ABO24623 ATikawa&Higuchi(1999) P/tJgjorAecj"、加ソ/o"ノノ(SulL)EB・Bartram ABO24625 Arikawa&Higuchi(l”,) PノヒZgjo/ノiec/""Te"刷りノ!〕ノノノⅢ"'(Cardot&Th6Ⅸ)Z・Iwats ABO24626 Arikawa&lliguchi(1999) P/cJgjo/Aecj冴加〃ecApem雄"mBruch&Schimp ABO24630 Arikawa&Higuchi(1999) PノヒJgjoノノiecj"m〃emoraノe(MiU.)AJaeger ABO29387 msubotaCtaI.(]999) PノヒコgjofAecjw”〃"。)イノα'"、(Hcdw.)Schimp・ ABO24634 Arikawa&lliguchi(l”9) Hypnaceae Cre"域"mmoノノ皿Sc皿"2(Hedw)Mitt. ABO24657 Arikawa&Iliguchi(1999) Oノossadblpノmsqgα/αeBroth.&M・Yasuda ABO50950 T1subotactaI.(2001a) OoノノヒJ"mmgl"Csα(Mitt.)Broth ABO94341 thisstudy Go"α"mSp/e"ぬ"s(Iisiba)Nog. ABO94340 thisstudy 〃C吃qgjeノノヒJpel.'・o6"s/α(Broth.)ZJwats・ ABl34944 Arikawa&Higuchi(2002) ノブDP""mcz《p1℃sWbrmeHedw. ABO39674 T1Subotactal.(2000) HTsuBoTA,T・ARIKAwA,H・AKⅣAMA,EDELuNA,D・GoNzALEz,M・HIGucHlANDH・DEGucHI649

TableLcontinued

Order/Familv/SDecies AccessionNo. Refbrcnces/Ori 1,

hbp"皿、/mdbe喧jjMitt、 ABO29390 TmbotaetaL(1999) ノカplT"”p此',Tag/bmzeWilson ABO29384 Tmbotactal.(1999) ノh0p"""T〃jS'0-Wr雄(Broth)PaⅢ ABO24656 TmbotactaL(1999) ZSqpteレツ9mmに"er皿加(Swb)Mitt・ AF233569 DcLunaetaL(2000) Lsqp/Clツgj"碗W"eαノセEB・Bartram ABO24650 Arikawa&Higuchi(1999) Or/ノカo肋ecj"mrz(/bsce"s(Dicks・exBrid.)Schimp ABO50951 T1subotactal.(ZOOla) DノmSjam"にα'α(Hedwb)Schimp ABO24642[asE〕ノノaj- Arikawa&Higuchi(1999) sje"αj""にα/α] PmOlgフノrj皿加'"e"s(Brid.)Schimp ABO24645[aM〕ノノαノー Arikawa&Higuchi(1999) sje"αpol()ノα"ノノ、] mxjp"y"""zao"DC"e"se(Besch)Zjwats・ ABO24648 Arikawa&Higuchi(1999) Leucodontales Climaciaccac 、 dj〃αcmmcjb"。、雄s(Hedw.)FWCber&D・Mohr ABOl9442 Akiyamaetal.(200qonly inDNAdalabase);thisstudy djmqcj"、ノヒZpo"jc"mLindb ABO19443 AkiyamaetaL(2000;onIy inDNAdatabasc);thisstudy Neckcrace2e Bおselm〃"gz`/α'α(Mitt.)Broth. ABO94789 thisstudy 〃o"、"α“"ノカⅢs'αrgjo"、""s(Mitt.)Dixon&Pdela ABO94792 thisstudy Varde 〃O"、ノノo`ノセ"鋤。"Scα(peノノビ/bノノ"、(Mitt.)M・FlCisch ABO94788 thissmdy ノVCcAcm”"lgcmMijll、HaI、 AFl58173 Maedactal(2000) ノVECにrqpsn〃"jZmm(Mitt.)M・Fleisch ABO94790 thisstudy Pm"α花ノノヒJα"6唖α(Bosch&SandcLac.)M、Fleisch ABO94787 thisstudy 71ham"o6ひ"mm6serjamm(Mitt・exSandeLac)BCTan ABO94791[as71/mmlzo‐ thissmdy bひHmsα"生j] Cyrtopodaceae Bescノbe1℃"ja61wl/b/jaHampc AJ275184 CoxetaI.(2000) Besc/,e”"jaeにg[J"‘jSsjmaDuby AF23IO97 DCLunactal.(2000) Q′"qp"sseros"s(Hedw.)Hookf AF231096 MishlcrctaL(onlyinDNA databasc) CIyphacaccae Q)p"αeasj"e"3曲E・BBartram ABOl9457 Macdactal(2000) qpmdm/qps町o6'"s(/b/ね(Nog.)Nog ABOl9458 Macdactal.(2000) Do。’【J/apo"jcaSandeLac ABOl9446 Maedactal.(2000) Pj/O"jcノカqpsjSdb"【α'α(Mitt.)Besch ABOl9460 MacdactaL(2000) Anomodontaccac A"omodO〃α66死WamsMitt. ABOl9468 Macdactal(2000) 」"omodO〃gjm“/MUll・HaL ABOl9469 Macdactal(2000) A"omodb"〃j"oパHedw.)Lindb ABOI947I Macdactal(2000) A"omodb〃'wgE/〃(MiilLHaL)KeissL ABOl9470 Macdaetal.(2000) ノヲロp/oノロ〕′me"j"腕ノolZgjlTerve(Broth)Broth ABOl9472 Macdactal.(2000) 〃ZJpノo/l〕ノノ,Telzj"'W,semb"jS'e(MiilLHaL)Broth. ABOl9473 Maedactal.(2000) 〃ど'1pe""e"、〃roccoae(Sull.&Lesq.)Cardot ABOl9474 MacdaetaL(2000) Hedwigiaceae h'bclWjgjZzc"jα'α(Hcdw)PLBeauM AFOO55I7 GoffinctctaL(1998) ノWiacocαノア“p"'p"、Sce"s(Brid)Paris AJ27SI71 Coxctal.(2000) A"""jc"、/brmosα"αNog ABOI9445 MaedaetaM2000) 化/仰o"eaes9mmノノノ(Tb6r)H・Akiy・ ABOI9447 MacdactaM2000) FD“"Demjα/とIpo"jca(Besch)Paris ABOI9450 Macdactal(2000) FbハsZroemJα〃ecAeroj火sBroth ABOI9449 MacdactaL(2000) FblIsstmellnm〃jchollzj"ね(Hcdw)Lindb. ABOl9448 Macdactal(2000) Le"CO血〃α'”v"℃"sNog・ ABOl9453 Macdactal.(2000) Le"CO巾"/"ノヒIce"s(Hedw)SulL AF23IO75 MishlerctaL(onIyinDNA databasc) Le"CO“〃mppo"ic"sNog. ABOl945I MaedactaL(2000) Le"COC/b〃SCW,olwTsなBesch・ ABOl9452 Maedaetal(2000) Le"codb"3cm”jdbs(Hedw.)Schwii伊 ABO95988 thisstudy Le"codb"secW"ぬs(Harv.)Mitt・ ABOl9454 Macdactal.(2000) LeHcodb〃soノicZ〕ノaAje"s応ILAkiy. ABO19455 Maedactal.(2000) Le"CO“〃re"lpemrzJsH,Akiyb ABOl9456 MacdactaI.(2000) Ptychomniaccae PO’c"om"io〃αcjcHノヒzだ(Brid)Mitt、 AF233576 DcLunaetaL(2000 Myuriaccae Emy”mmsmjcⅢ、(Mitt.)NC9. ABOl9463 Akiyamaetal(ZOOO5only inDNAdatabase);thisstudy MウノHrjⅢmhocノzsje"erj(Schimp.)Kindb AF233575 DcLunactaL(2000) 650 HikobiaVoLl3,No.4,2002

TableLcontinued

Order/FamiIv/SDccies AccessionNo. RcferCnccs/Origin Wardiaceae レイblz/ねノリlgl・ome〃jcaHarv.&Hook AJ275I70 CoxetaL(2000) Prionodontaceae P"o"odo"火"s"s(SwbexHedw.)Mijll・Ha1. AFl58174 DcLunaetaL(2000) 7ZJjwα"o6ひ"mspecJoszJmNog・ ABO19466 AkiyamactaL(2000;only inDNAdatabasc);thisstudy Ptcroblyaccae P'em6ひo〃qr6Wsc"mMitt・ ABOl9461 MacdactaI.(2000) Prem6ひo〃。b"sWmHornsch AFl58175 DcLunaetal(2000) P/ero6ひqpsjlForje"'αノノSsubspj′H2""α"e"s心(Broth)Nog ABO19462 Macdactal(2000) mJcノMomaj"ぬczJmMitt・ ABO19464 AkiyamactaI.(Z00qonIy inDNAdatabasc);thissmdy Trachypodaceae

7》zzc/1)podbps応α皿"cヅノ、α(Mitt)M・F1cisch ABO24682 Arikawa&lliguchi(]999) □ 7》zJcノW,Ⅸs6jcoノorRCinw.&Homsch AF233577 DeLunactaL(2000) Mcteoriaccac P[Zpj"αrjZJcノピppej(HornschexMUlLHaI.)AJaeger AFl58I72 DeLunaetal.(2000) Hookeriales Daltoniaccac qP Lepj[わ〃/mms"rj"αme"seMijⅡ、Hal、 AF233578 DcLunactal(2000) Hookeriaceae 〃OoAerjaacm/bノノαHook&Orev、 AFl58170 DcLunactaI.(2000) HypoptcD/giaccac ノbpqpje奴gjHmZamarなcj(Sw.)B「id・exMUlI・Hal、 AFl58171 DcLunactal(2000) ハ0ィpqp'Cl〕lgj"〃/α/zj/e"seAngstrOm AF231095 MishleretaI.(onIyinDNA databasc) BryaIes BIyaceae MJeノノcノzAq/brjaeノolZgzJ'α(Hoppc&Homsch)Nccs& AF232693 CoxctaI.(2000) Hornsch O〃ノmdb"""〃ノj"eα”Schwiigr・ AJ275I74 CoxctaL(2000) PCカノmclwcノヒJ(Hedw.)Lindb AJ275175 Coxctal(2000) Lcptostomataccac LepmsjomWmmacmcα'1p"、(Hcdw.)Bach・Pyl、 Aj275178 CoxctaL(2000) Mniaccac A化j""ノノjomso"jjSchimp AFOO55I8 OofYinclctaI.(1998) Pmgjom"j"、cⅢSpj血/"m(I-ledw.)1XLKop・ U87082lasM"j"m Lewisctal(1997) cWqpjdbm'??] Pmgjom"ノヅノ,,/ZJpo"jc"、(Lindb)1J・Kop・ ABO50992 T1subotactaL(2001a) Rhizogoniaccac Bw・ノio6〃""2Vαノノハーgmrme(HampccxMUlLHaL)Manucl AJ275179 CoxetaI.(2000) Bartramiaccac Bar"αmjaPolm/brmjSHedW ABO24620 Arikawa&Higuchi(1999) Lejomeノィz6ar"αmjo此尤s(Hook.)Paris AF478238 Magombo(2002) Pノノノノo"o油α"ぬ"α(Mitt.)A・Jacgcr AF478240 Magombo(2002) Aulacomniaccac A"ノacom"j皿、!zィ垣竝《"(WahIcnb)Schwiigr・ AJ275180 Coxctal(2000) RacopiIaceac Racqpj/lJmcom'0ノⅢ/αcezィ"(MUⅡ、llaL)Rcichardt AF231094 Mishlcrctal(onlyinDNA database)

Outgrouptaxa 、 Erpodiaccac I'b"'2J"eノノヒJsj"elTsLs(Vent.)MUllHal AFOO5546 GofYinctctal(1998) SpIachnaccac 7h〕ノノoljα〃"92`/α/α(Dicks.)Lindb AFOO5515 GofTinctctal.(1998) Orthotrichaccac D'wmmo"`地06'2Wb/jaMUllllaL AF232697 Coxctal(2000) ノMr"mj"j"W"c"rv

DM欧伽crjo",PCR。〃/抗cαノノo〃α"c/DM aligned,thosebelongingtothesamesequenceare Sb9"e"cmg representedbyasinglesequenCe,andanyun- TotalDNAiswereextractedfi・omfieshsam- alignablesequencewasomittedfiomthedata plesorherbariumspecimensbymodificationsof sets. theCTABmethod(Murray&Thompsonl980; Arikawa&Higuchil999;TsubotaetaL2000)or A"αbノsjsjWAoqls phenol-chlorofbrmmethod(TsubotaetaL1999) Treeswereconstructedbythefbllowingthree PCRamplificationsof76cLgenesegmentsand methods:theneighborjoining(NJ)(Saitou&Nei directseqUenceanalyseswerecarriedoutusing l987),themaximum-parsimony(MP)method standardconditionsaccordingtothemanufactur- (Fitchl971),andthemaximum-likelihood(ML) ersinstructions、Thereactionswereperfbrmedin method(Felsensteinl981).Thetreesobtainedby thethermalcyclerswithPCRamplificationkits thethreemethodswereappraisedbythelog-like- andsyntheticprimers・Thesequenceswereelec- lihoodmeasurewithNucMLinMOLPHY23b3 trophoresedonautomatedsequencers,andana- (Adachi&Hasegawal996). 、伽α"ceaM〕ノsjs--ANJtreewasconstructed 。 lyzedonthedata-analysissystemThesequences obtainedinthepresentstudyweresubmittedto byNucMLandNJdistinMOLPHYversion theDDBJ/EMBL/GenBanklntemationalNucle- 23b3package(Adachi&Hasegawal996,see otideSequenceDatabaseCollaboration AppendixB)usingHKY85model(Hasegawaet DetailsandiilrtherinfbrmationfbrDNAex- aL1985)fiorthedistanceestimations. tractingprotocols,amplificationprimers,PCR Pα/M,、〃α"αlbMS-MPtreeswerecon‐ protocolsandthoseofsequencingreactionsare structedbyPAUPRat(Sikes&Lewis2001), describedpreviouslyinArikawaandHiguchi whichisatooltoimplementtheParsimony (1999),DeLunaetaL(1999),MaedaetaL Ratchetsearches(Nixonl999)withPAUP*,over (2000),andTsubotaandcoworkers(1999,2000, PAUP*4.0blO(Swoffbrd2002)Jnanalysesby 2001a,b). PAUPRat,MPtreesweresearchedusingthePar- simonyRatchetsearchstrategyintwenty200it- DajM"αl1yses erationruns Darasa-Atotalofl8176cLgenesequences Mzx加川/MjAoodq"αウノsな-MLtreeswere wereexamined(TableLwithDDBJ/EMBL/Gen- constructedwiththeNucMLinMOLPHYver‐ Bankaccessionnumbers).Thisdatasetcontains sion23b3package(Adachi&Hasegawal996). ninesequencesobtainedfiomourlaboratoryand FortheMLanalysesHKY85model(Hasegawa l72registeredsequencesafterBLASTsearches etaLl985)wasusedastheestimatemodeLML intheNCBIhomepagefbrtheDNAdatabase・ treeswereconstructedwiththelocalrearrange- ThematrixincludeslOOspecies(l020TUs)of mentsearchfiomtheNJtreebyNucMLand theHypnales,S1speciesofLeucodontales,4spe- NJdist1.2.5(Adachi&Hasegawal996);andMP ciesofHookeriales,andothersasoutgroups,to treesbyPAUPRat・Best-confbnnedtransition/ makeasurveyfbrthephylogeneticrelationships transversion(Ts/TV)parameterswereestimated betweenthehypnobryaleanmosses.〃"伽α/lリノー basedoncalculationswiththeHKY85modelby ヅomeかjcaandP/iWo〃かeノノapare"swereused NucMLemployingthe“-topt,,optionparameter、 asthemostdistantoutgroups. 乃eeco"ZparjSo〃MノノMog-ノノノヒビノノ/IOOC/αノ?‘sev- 』/jg71me"ノーManualalignmentwascarriedout e7α〃esな一TreecomparisonwiththeMLcriteria fbrthel81sequencesagainstthoseofPノiリノSCO〃- byNucMLwascarriedouttoevaluatetheresult- 〃e"αpate"sand此"co6r〕/"碗sca6/w"zwithan ingtrees、Severalmeasureswereusedestimating editorprogramandouroriginalprogram,Sclean thelog-likelihoodofdifferenttreetopologies, 281(byTsubotal998-2002,inourhttpsite,see standarderrors(SES)ofthedifferenceinlog-like- AppendixB)Theotheroriginalprogramswrlt- lihood(Kishino&Hasegawal989),andtheboot‐ teninPerlandCwerealsoappliedfbrthedata strapprobabilityestimatedbytheRELL(resam- processingUndeterminedsites,gaps,andre- plingofestimatedlog-likelihoodofsites)method gionsnotclearlyalignablefbrallsequenceswere (KishinoetaLl990;Hasegawa&Kishinol994) excludedfi・omtheanalyses、Amongsequences TheprogrampackageCONSELO1e(Shimo- 652 HikobiaVoLl3,No.4,2002

daira&Hasegawa200Dwasalsousedtocalcu- P/iリノノoge"αjcaM〕入Fes latesthep-valuesoftheconfidencefbrthebifUr- Thedatamatrixwaspreparedfbranalysesof catingcandidatetopologiesusingseveraltesting phylogeneticrelationshipsofthehypnobryalean procedures:theApproximatelyUnbiased(AU) mosseSAtotalof2,223topologies,ofwhich test(Shimodaira2000,2002)usingthemultiscale only7treetopologieswerebifilrcate,wereob- bootstraptechniquqtheKishino-Hasegawa(KH) tainedfTomfburanalyses:1MLandlNJtopolo- test(Kishino&Hasegawal989);andthe giesbyNucML;and2,221MPbyPAUPRatover Shimodaira-Hasegawa(SH)test(Shimodaira& PAUP*・Onthe7bifUrcatingtopologies,local Hasegawal999;GoldmanetaL2000). rearrangementsearcheswereconstructedfbrthe Boommp卿j-UsingNucML,abootstrap- obtainedtopologies・Atotalofl2bifhrcatingto- pingtestwithlocalbootstrapprobabilities(LBPs; pologieswereusedfbrthefbllowinganalysis、 in%)(Adachi&Hasegawal996)wasappliedfbr Moredetailedtopologiesweresearchedthrough ▼ thebestMLtopology・LBPisarelativebootstrap theobtainedtreesusinglog-likelihoodmeasure fi・equencyobtainedffomtopologysearchbylocal andseveraltests(Table2)HKY85modelwas

rearrangementsofNucMLThevaluewascom‐ usedastheestimatemodelwiththe 勺 parablewithavalueofFelsenstein1s(1985)boot- transition/transversionparameterestimatedけom strapprobability,anditisalittlelargerthanthe datasetfbrtheMLtreeas339・Thehighestlike- standardbootstrapprobability lihoodtreeofhypnobryaleanmosseswasob- Cb"Sc"s"s/ree-Astrictconsensustreelbr tained,andshowninFigLTheLog-likelihood thebifUrcatingtopologieswithhigh-ranking valuefbrtheMLtreewas-154458±794.6. log-likelihoodvaluesthatpassedtheAUtestwas TheLBPsfbrthecladeswerecomparativelylow alsocomputedbyPAUP*. values(41-100%)Becauseeachtopologydid notgainadecidedadvantageoverothertopolo-

Results gies,a50%majority-ruleconsensustreeof highrankingtreeswasalsoobtained,andpre- O6jaj"ecl/se9"e"cedma sentedinFig2Thistreealsohasatendencyto- Newr6cLsequenceswereobtainedfbreleven wardtheMLtree・ species:BjsMjaノノ"g"〃α,CMO"e"'o〃ノガノノcノー TheMLandconsensustreesfionnnotable """0,Goノノα"/α'wgj"Csα,G、S〃た"。e"s,f/o"zα/ja- clades:(1)twomaiorcladesareshowninFigl cノellp〃sjaXgj"o"jα""8,〃b"、ノノo〃dro〃scallpeノー [thecombinedHypnales(s・strl=sensuVitt ノ(/bノノ川Le"COC/b〃Sc〃oj伽,ノVbcke'QpsjMjjj- l984D-Leucodontalesclade(87%LBPvaluein 伽ノヒJ,Pj""areノノαα'、g"α、ノjα"z"o6'測加s"6se‐ MLtree,82%supportinconsensustree);andthe γj川"MndW/iiノノImco"cav(/Mα,For〃ノhiaco" Hookerialesclade(64%LBP,73%)]inthehyp‐ cav肋/jaanentiresequencel,428bplongwas nobryaleanclade(96%LBP,100%);and(2)48 obtainedThesequenceshavebeensubmittedto basicclades[Sematophyllaceaeclade(96%LBP, theDNAdatabaseundertheserialaccession 100%);E川血〃clade(96%LBP,100%); numbersasshownTableL E"joc/、〃ノw6jc""c/"sclade;71ノノ"城""Tclade (100%LBP,100%);肋jetj"eノノaa6jejj"αclade; 比9"e"Ceαノノg"me"j AOpjerygj叩sjs-O"hotAecj"mclade(94%LBP, Thedatamatrixwaspreparedfbrphylogenetic 100%);EC"/qW〃"e"jjclade;Hypnaceaeclade analysesbymanualalignmentofthesequences・ (71%LBP,55%);血"COC/b"-ne7o6r〕ノo''-0〕ノー Thedatasetsweresubmittedtoa5%chi-square p力aeaclade(89%LBP,55%);A"o"ZodO〃'wgeノノノ testbyTREBPUZZLE50(Strimmer&Haeseler clade;He”ogje"αpe〃o6"sjaclade;んOp/eノフノー l996),andallthedatapassedthetest・Forthe gj""ハノノ"eα/eclade;Prjo"odO〃(ノセ"s"sclade;。" analyses,atotalofLO92sitesofl8176cLse- /伽cハノα/b""Csα"αclade;Rノノ〕ノ肋α火llpA"s- quenceswereusedNucleotidefi・equenciesesti- fMoco〃"m-LoGWo6/Wm-Cte"/血"mclade(89 matedftomthedatasetwereA=29.2%,C= %LBP,100%);MノM"碗-sb〃o〃"mclade(88 17.5%,G=22.2%,andT=31.1%.Inthesites %LBP,100%);伽c/iDlp"s-P叩ノノノarjq-伽c/1)ノー ofthealignedr6cLsequences,417sites(=382% podopsjs-D"/ハノeノノaclade(89%LBP,100%); inLO92sites)werevariable. P/cJgjotAecj""zclade(98%LBP,100%); H・TsuBoTA,T、ARIKAwA,H・AKIYAMA,EDELuNA,D・GoNzALEz,M・HIGucHIANDH・DEGucHI 653

Table2Compansonoflog-likelihoodscoresamongthel2resultingbifilrcatingtopologiesamongthe hypnobryaleanmossesfbr76cLsequenceswiththeHKY85model(HasegawaetaL1985)Thelog-likelihood valueswerecalculatedbyNucML(Adachi&Hasegawal996),andallthep-valuesbyCONSEL(Shimodaira& Hasegawa2001)fiPomlO,O00repetitions、Thelog-likelihoodvaluesofthehighestlikelihoodtreesaregivenin anglebrackets,andthedifferencesinlog-likelihoodofalternativetreesfiomthatoftheMLtreeareshownwith theirstandarderrors(SE)fbllowing±・Thep-valuesthatarenotsignifiCantata=OO5areemphasizedinbold typeTopologieswithasterisksintheAUcolumnwereusedfbrtheconsensustree(Fig2)

Rank△/士SE MethodProgram Note AUBPKHSH 。g傘4白5●6竃3傘8●3戦0傘7△4。23 砂茄佃瓠⑬州Ⅳ列m刈りⅡ 000000000000 200101000000 389154445740 902556857850 000000000000 633323222210 540594877573 465808376390 000000000000 988887777640 595417973084 758629540116 皿ⅢⅢⅢⅢⅢwwwⅢⅢ川 000000000000 引叺266023孔040 50シ750シ0シ5(U1400”5 斜士士士士士士士士士士士 52243533406〆08 868Ⅱ0498Ⅱ。L0O RRRRRRRRRRLL 馳即岬山川川岼岼岬岼 醐蜘UM皿皿刀刃勺刃 LL 眺臥恥恥恥恥叺叺恥恥叩、 mmwmmmwmmm叩珊 ++l+++lIくIN シ7〈U今J776(564,句J7』 tttttttttt く-11122つ』24‐56 aaaaaaaaaa ●●●●●●●●●●●● ML(Fig.1) ●●●●●●●。●●●● ●●●●●●●●●●●● LRSfiPomMP-l 23456789012 LRSfiDmMP-2 ’’’’’’一||刊

LRSfiPomMP-4 LRSfiFomMP-3 LRSfiPomMP-5

ME 111

LRSfiPomNJ-l d J 川 J + S

Note-AU:Approximateunbiasedtest(Shimodaira2000,2002),BP:thebootstrapselectionprobabilityofFelsenstein(1985) estimatedbytheRELLresamplingmethod(KishinoetaLl990;Hasegawa&Kishinol994),KH:Kishino-Hasegawatest(Kishino &Hasegawal989),SH:Shimodaira-Hasegawatest(Shimodaira&Hasegawal999;GoldmanetaL2000);andLRS:thelocal reanPangementsearch(Adachi&Hasegawal996)byNucML

P/e"rozj"m-町/OCC〃as伽"zclade(82%LBP, Oursmdycorroboratesthatl)theHypnales(s 82%);Brachytheciaceaeclade(66%LBP,100%); strl=sensuVittl984])andLeucodontalesare Climaciaceaeclade(99%LBP'100%);P/e"rozJ- notmonophyleticentities,whiletheHookeriales OpsLsclade;Stereophyllaceaeclade(100%LBP, withtheinclusionofthePtychomniaceaeara2) 100%);lVboC/O/jc/io"zjjraW""α"e"sjlyclade;〃 thecombinedHypnales(sstr.[=sensuVitt me"卯""m〃"e"sclade;Amblystegiaceaeclade l984])andLeucodontalescompriseawellsup‐ (99%LBP,100%);Hjlp""、c叩ressl/M71eclade; portedsistercladetotheHookeriales;and3)the 伽c/iリノノo加ajMc"mclade;-FoKMo- familiesEntodontaceae(s・str.[=sensuVitt

P e〃αclade(86%LBP,100%);Lembophyllaceae l984;TsubotaetaL2000]),,Se‐ clade(82%LBP,100%);nJxjp/iし〕ノノノ"m-G/Cs‐ matophyllaceae(s」at.[=sensuTsubota&co- Sα(/elp/i"s-Mi〕ノa6ea-肋Mja-Homα/jade/p伽 workers2000,2001a,b]),Thuidiaceae(sstr.[= clade(90%LBP,73%);Anomodontaceaeclade sensuTsubotaetaL2000DandPlagiotheciaceae (70%LBP,100%);Fontinalaceaeclade(100% (s・str.[=sensupresent])areresolvedasmono- LBP,100%);Hookerialesclade(64%LBP, phyleticgroups、MembersoftheAmblystegia- 73%);LeY)/Cs/om"mmacrocaZp"mclade;Ba7〃- ceae,HypnaceaaandLeucodontaceaearedis- 〃apo加加'伽clade;Cyrtopodaceaeclade persedamongseveralclades. (100%LBP,100%);HDlp"ode"Q/、〃〃?e"z/asi/

clade;RacOpj/""zcom′om/ace""Zclade;けr‐ Discussion r/io6M"、ノαノノjs-g7aZjaec/αcノビ,.』"/ZJco"?"j""?/z"‐ gjc/""zclade;O〃hoc/D"〃"1ノノ"eα'でclade; LOrdinalrelationships P/iノノo"otjs-Lejome/αclade(97%LBP,100%); Ourphylogeneticanalysiswith76cLlarge-scale Meノノcハノjq/brae/o"gajeclade;PAO/jacjw血 datasetdidnotrecovereitherthemonophylyof cladaMniaceaeclade(100%LBP,100%);Hed‐ theorderHypnales(s・str.[=sensuVittl984]),or wigiaceaeclade(100%LBP,100%);andPWtJmlja themonophylyoftheLeucodontales;although h〕lgromeかjcaclade] theanalysisrecoveredthemonophylyofthe 654 HikobiaVoll3,No.4,2002

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HookerialesThecombinedHypnalesandLeuco- somespeciesoftheBryales,Hookeriales,Leuco‐ ▲ dontales,however,compnseawell-supported dontalesandHypnaleSDeLunaetaL(2000)and sistercladetotheHookeriales・Ourresultsalso BucketaL(2000)revealedthenon-independence showedthemonophylyofallhypnobryalean ofthetraditionalordersHypnalesandLeucodon- mossesaspreviouslydiscoveredbyDeLunaand tales,andsuggestedthenecessitytobereconsid- coworkers(1999,2000),andBucketaL(2000). eredasasinglemajorlineage Inthepresentstudywithalarge-scaledataset, HDlp"α伽α"`Le"CO血"〃/“ monophylyofeachorderHypnales(s・strI=sen- Tsubotaetal.(1999)showedapreliminary suVittl984DorLeucodontaleswasnotrecov- phylogeneticrelationshipoftheHypnalesbased eredunderdifferenttreesearchprocedures・The on76cLdataset,especiallyrevealingthepoly- combinedHypnales(s・str.)andLeucodontales phylyoftheHypnaceae,with340TUsfbrthe cladewassupportedwith87%LBPintheML analysis、DeLunaetaL(1999)suggestedthat treeand82%supportintheconsensustree,root- monophylyofpleurocarpousmossesincluding edbythecladeoftheFontinalaceacThiscom- 658 HikobiaVoLl3,No.4,2002 binedcladecon・espondstotheHypnales(s」at.) HDP"αceae asrevealedbyDeLunaetal.(2000)andnamed ThefiamiliesHypnaceae(withca40genera: astheHypniaebyBucketal.(2000).Members Vittl984)areamongthemostdiversifiedtaxon- previouslytreatedastheLeucodontalesappeared omicgroupsinthepleurocarpousmosses、The asseveralcladesinthecombinedclade・Ourre- ftlmilialcircumscriptionwithintheHypnales,es- sultsofthepresentstudybasedonthe76cLgene peciallybetweentheHypnaceaeandotherfami- donotconcurwiththeclassificationandphylog- lies,suchastheSematophyllaceae,Plagiothecia- enyoftheorderHypnalesproposedbyVitt ceae,andAmblystegiaceae,haslatelybecomea (1984),andBuckandVitt(1986)Theseresults subjectofspecialinterestandbeenrepeatedly alsosuggestthattheirsporophyticmorphological discussed(e9.,NishimuraetaL1984). similarities,suchasdevelopmentofperistomal I、theobtainedMLandconsensustrees,the teethandexothecialcells,aremultipletransitions familyHypnaceae,aswellasitstypegenusHDlp- @ tosimilarsolutionstoepiphytismintheHypnales ""肌provedtobenon-monophyleticdistributing (slat.). invariouspositionsinthetrees,regardlessofthe inclusionofD/α伽α火!〃/1α(inc.〃or/ieM/α)and HDCノ(erjaにs 〃/hiainthefamily,althoughtwospeciesof MonophylyoftheHookeriales[inc・thePty‐ fbip"z川andthegeneraGoノノα"jαand〃/αjsja chomniaceae,representedbyPltycAom"jo〃αcjc"- fbnnasinglecladewith71%LBPsupportThis ,7e;sensuBucketaL2000;sensuBuck&Goffi- fact,togetherwiththepresentanalysiss叩ple- net2000]wassupportedwith55%LBPinthe mentedbyadditionaltaxa,corroboratesthereport MLtreeand73%supportinconsensustree,be- ofTsubotaetal(1999),suggestingthatthefiam‐ ingsistertothecombinedHypnales-Leucodon- ilyHypnaceae,aswellasthegenusjL卯"""',is talesinourphylogeneticanalyses;althoughsome polyphyleticalthoughthegenushasbeencare- oftheobtainedtreesshowedthatthePtychomni- filllyrevisedbymonographers(e9.,A、do1986, aceaeappearedasasistertothelargecladein‐ 1995).Theresultsofthepresentstudybasedon cludingothermemberoftheHookerialesandthe the76cLgenedonotconcurwiththecircum- combinedHypnales-Leucodonta1es・Moredata scriptionoftheHypnaceaebyNishimuraetal. areinneedtoclarifythephylogeneticpositionof (1984).Thisalsomeansthatthetaxonomiccon‐ thePtychomniaceae, fUsionintheHypnalesmightbeascribedtodiver- TwomajorcladesoftheHypnales(s」at.[= sifyoftheHypnaceaecurrentlyunderstoodasa sensuDeLunaetaL2000;sensuBucketal largetaxonomicgroupcomprisingalargenumber 2000D:thecombinedHypnales(s・str.)andLeuc- ofspecies、 odontaleswiththeexceptionoftheCyrtopo‐ Nishimuraetal.(1984)placedCZJノノノe堰o"eノノZJ daceae,andHookerialesfbnnasinglelargeclade inthesubfIamilyHypnoideaeofthefhmilyHyp- withstrongsupport(96%LBPintheMLtree, naceae.Hedeniis(1990)transferredH)lp""籾 100%supportinthcconsensustreeLasrepre‐ ノノ"肋eZgjjMittintothegenusCMjeZgo"eノノα sentedinpreviousworks(DeLuna&coworkers ()basedoncharactersincluding l999,2000;BucketaL2000). capsulestructure,alarceUsandpseudoparaphyl- lia、Ando(1995),however,disagreedwith 2.Familialrelationships,especiallytheHyp- Hedeniis(1990)andretainedH)lp""碗//"cIl6ergjj naceaeandpossiblyrelatedfamilies inthegenuM卯""mTheobtainedtreeshows hthepresentinvestigation,somefiamilies,such themonophylyfbrtheH1lp""腕ノノ"cIlbergjj-CtJノー astheSematophyllaceae(s」at.),Plagiothecia‐ ノje堰o"eノノαc"Spjc/、αcladesupportingbyhigh ceae(sstr.)andFontinalaceae,areresolvedas bootstrapvalues(100%LBPinMLtree),al‐ monophyleticgroups,whereasnoparticularclade thoughthecladechangeditspositionaccording isrecognizedtoaccommodatemembersofthe totopologiesThisresultwassuggestedby familiesHypnaceaeandLeucodontaceaeThe Hedeniis(1990)basedonthecharactersincluding Fontinalaceaeareplacedatthebasalpartofthe capsulestructure,alarceUsandpseudoparaphyl- combinedHypnalesandLeucodontalesclade. IiaandTsubotaetal.(1999)basedonlbcLdata; andconfinnedagaininthepresentstudy. HTsuBoTA,T・ARIKAwA,H・AKIYAMA,EDELuNA,D・GoNzALEz,MHIGucHIANDH、DEGucHI 659

比marqp/1〕ノノノZJceae significantfbrtaxonomicreCognitionofthefam- TheSematophyllaceaeisalsoalargetaxon- ilySematophyllaceae,asconcludedbyTsubotaet omicgroupincludingnumerousspecies(withca aL(200lb).Moreover,morerapidrateofnucle- 50genera:Vittl984),andthelimitsbetweenthe otidesubstitutionsoftheSematophyllaceae(S, HypnaceaeandtheSematophyllaceaevaryamong lat.)wasdifferentfiomthatoftheotherlineage taxonomists,TanandYu(1998,1999)madea and,therefbre,characteristictothislineage・This cladisticanalysisfbrthemorphologicaldata,and isolationmighthavebeencoITelatedtotheeco- showedtheparaphylyoftheSematophyllaceae, logicalrequirements,asthesetaxainthelineage Tsubotaandcoworkers(1999,2000,2001a,b) withhabitatpreferencefbrgrowingontree clarifiedtheirphylogeneticrelationshipsinthe trunks. hypnobryaleanmosses,andshowedthemono- P phylyoftheSematophyllaceae(s」at.;sensu E'zroqlomaceae TsubotaetaL2000,2001a,b).Arikawaand Severaldiscussionshavebeenmadeonthere- Higuchi(2002),however,showedtheinclusion lationshipoftheEntodontaceaeandThuidiaceae oftheEntodontaceaewithinthecladeoftheSe- totheHypnaceaeandtheSematophyllaceaefiom matophyllaceae(slat.),althoughthesupportwas molecularviewpoints・Mizushima(1960)and notsostrong Buck(1980)publishedmonographicworkson DistinctionbetweentheHypnaceaeandSe‐ theEntodontaceaaandtheyhavedifferentviews matophyllaceaehasbeencontroversiaLespecially withregardtothesystematicpositionofthege- concerningthephylogeneticpositionofsome nusO7rho/hecj"腕.Mizushima(1960)placedit genera,suchas〃/α〃α火IIPAα(incB7oj/je7eノノα), inEntodontaceae,whileBuck(1980)intheHyp- 〃伽andHbjempM/i"腕.DeLunaetal. naceae,Vitt(1984),andBuckandGofTmet (2000)alsoshowedtheroughconceptoftheSe‐ (2000)treatedthefamilyinanarrowsense,in‐ matophyllaceae,althoughAQprer〕/gj"mre"e'wm cludingonlythefburgenera:E"加巾",ErWAro- wouldneedtobetransfelTedfiomtheHypnaceae、 c/o"〃腕,MCso"oc/O〃and〃/伽job'Wm.The ArikawaandHiguchi(1999)suggestedD/伽ja presentsmdyshowedthattheEntodontaceae(s polb′α"伽reported,as〃/α伽eノノapoノ!〕ノα"伽, str.)confinnstheexclusionofO7tAo/hecj"mand shouldbeconsideredintheSematophyllaceae RDe"血Sc/empocノノ"mffomthefamily,supporting OurresultshowedthemonophylyoftheSemato- thetreatmentofVitt(1984),andBuckandGoffi- phyllaceae(slat.)proposedbyTsubotaandco- net(2000)or/hoZhecj"腕ノW/bsce"sfbrmeda workers(2000,2001a,b),includingthegenera cladewithhOprerygmp川加"eルァノα"α,and D伽jα火IIPノカα,附加andHe〃qp/Mj川and 囚ye"dmc/empodj"mp"7"mappearedintheclade somespeciespreviouslytreatedasmembersof withmembersoftheBrachytheciaceae、Thetree theHypnaceae:Hjlp""加伽ro-v"枕,ZFOpjer〕ノー alsoshowsthatthecladeco、sistingoftheSe- gj"腕/e"e'wmand〃/αjsjapoノ!〕ノα"ノノ、,wasre- matophyllaceae(s」at.[=sensuTsubotaetaL vealedbyboththemostMLtreewithstrongsup- 200q2001a,b]),EntodontaceaeandThuidiaceae port(96%LBP)andtheconsensustreeWecan- wassupportedwithhighLBP(97%LBPinML P notsupportthephylogeneticpositionofP、pobノー tree).Vitt(1984)placedtheEntodontaceaeclose α"rAaonthebasisofthedatapresentlyavailable totheSematophyllaceaeonthebasisofmorphol- Further,itisnecessarytoverifytheidentification ogicalandecologicalcharactersOurresultsup- ofthematerialofthespecies・ portsthetreatmentoftheEntodontaceae,butnot Aspreviouslyindicatedinmorphologicaldata theThuidiaceae. analysesbyHedeniis(1995,1996),phylogenetic relationshipsbasedonmoleculardatashouldbe Pノagjoj/iecmceae surveyedbetweentheSematophyllaceaeandthe Thetreeshowedthecladeconsistingofonly familiesintheorderHookeriales・Themono- thegenusP/αgjorhecj"mnearthecladesinclud- phylyoftheSematophyllaceaeandtheHookeri- ingtheBrachytheciaceaeandsomemembersof aleshadnophylogenicevidenceinouranalyses theHylocomiaceae・Recently,Pedersenand Thepresentsmdyrevealsatleastthatthechar- Hedeniis(2002)showedthephylogenyofthePla- actersofwell-developedalarcellsandhabitatare giotheciaceaebasedonmorphologicaldataand 660 HikobiaVoLl3,No.4,2002 twoDNAregions:ノアs4and伽L-伽F,suggesting ogyandtreatedtheAmblystegiaceaewithanar- thefamilywithawidecircumscriptionArikawa rowersenseThepresenttreeconfinnsthisnar- andHiguchi(2002)clarifiedthephylogeneticpo‐ rowefamilialcircumscription,placing4"αcam- sitionofthegeneraA0prerygj叩巾andHblzo- ptoqlO〃intheAmblystegiaceae. gjeノノα,andproposedtheinclusionofAOpZer)Igj- qpsなwithinthePlagiotheciaceaeThepresent 〃αc/iリノrAecjaceae investigationdidnotsupportthesepreviousanal- Thepresentsmdyshowedthemonophylyof yses,discoveringthemonophylyofthePlagiothe- theBrachytheciaceae,includingOAzJ〃"m1eaand ciaceaeincludingonlythegenusP/αgjorAecj"腕. Hb/jco血""z"'zaswellasRse"ロノDSC/empoい""Z andexcluding7bme"卯""腕.Hセノjcoc/Wz伽mwas S〃e叩M/αceae previouslytreatedintheMyriniaceaebyVitt ArikawaandHiguchi(1999),andthefbllow‐ (1984)andBuckandGoffinet(2000).Ourresult ingstudies(e9.,Pedersen&Hedeniis2002; supportstheplacementofAe"cノDSC/empo`j"m Arikawa&Higuchi2002)clarifiedtheexclusion byBuckandGoffinet(2000),butnotHb"COC/b"‐ oftheStereophyllaceaeffomthePlagiotheci- 〃'70.ThegeneraP/αgjor/iecj"腕,P/e"rozj"mand aceae,andthemonophylyoftheStereophyllaceae fMoco〃asノノwmwereplacedinacommonclade basedonmolecularphylogeneticanalysesThe withthetaxaoftheBrachytheciaceae(excluded presentresultcorroboratedthepreviousworks Tb"Te"/ノ!〕lp""〃〃"e"s)with66%LBPinML showingtheStereophyllaceaeasasistertothe tree. 7bme"卯""加一 ノVbo巾ノノc/IC加加clade,althoughtheirphyloge- MCjeo7mceae neticpositionisnotsostableintheHypnales(s、 HuttunenandIgnatov(perscomm.)suggested lat.[=sensuDeLunaetaL2000;sensuBucket thecloserelationshipbetweentheBrachythecia- aL2000])clade. ceaeandMeteoriaceaeintheirpreliminalyanaly- ses・Ourpresentanalysisincludesonlyonespe- HMocomaceae ciesoftheMeteoriaceae・Furthersequencesof lntheMLtree,theHylocomiaceaeappearedas theMeteoriaceaeareneededtoshowtherelation- twodistinctclades:R/Uノ肋α火llpAMD-fMoco加川 shipsbetweenthetwofamilies. 一LoalAeo6'Wm-de"jcノノ"腕cladeatthebasalpo- sitionofthecombinedseveralclades,suchasthe 、"伽aceαeα"CM"o"zodo"raceae BrachytheciaceaecladeandtheP/CJgjorAecj"m TheThuidiaceae(s・str.[=sensuTsubotaetaL clade;andP/e"'℃zj"m-Hy/OCC〃as〃mcladeas 2000]),consistingofonlythegenusT1h"j`j"川, thesistercladetothePmgjoj/iecj"mcladcAre- fbnnedasinglecladebeingsistertotheEntodon- viewofthcirfamilialcircumscriptionisneeded taceae(s・str.[=sensuVittl984;sensuBuck& 1 fbrthegeneraP/e"7ozJ"mandfMoco〃as加川. Goffinet2000]),asshownbyTsubotaetaL (2001a).肋je""eノノZza6jerj"αandBo"/ZlO′α〃ノー 伽6(Wegjaceae /emappearedoutofbutcloseto,thecladeofthe Thephylogenetictreesinthepresentstudydis- Thuidiaceac coveredpolyphylyoftheAmblystegiaceae(s Thegenera比p/o/j〕ノ腕e"伽and』"omo巾", lat.)aspreviouslysuggestedbytraditionaltax- exceptfbrAgi7arZノノノ,appearedinthecladein- onomists(e、9,Hedeniisl997),showingthree cludingmembersoftheNeckeraceae,fbrminga clades:CMO"e"ro"-DreYフα"oc/αc/"s-Hyg7oα"'‐ resolvedcladeplacingthesecondalybasalposi- 611〕Mgj"〃一A"αcα叩/o血〃clade,CaノノjeZgo"eノノa tioninthecombinedHypnales-Leucodontales clade,and71ome"卯"""Zclade,BuckandGoffi‐ MaedaetaL(2000)alreadyclarifiedthepoly‐ net(2000)treatedthefiamilywithanarrowSense, phylyoftheAnomodontaceae,showingaclade excludingsomegeneratreatedinthepresent withHZZp/o/i)ノme"j"耐,比Zpaj"e"ro〃andsome analysis,e,9.,CMjeHgo"eノノα(inc.f卯""腕ノノ"‘/L A"o"zo吻刀species・Thesefactsindicatedthat 6e卿/)andnme"卯""腕,fi・omthefiamily・ somegenera,suchasHZJpM〕ノ腕e"伽anM"o- Vanderpoortenetal.(2002)showedaphyloge- mo血〃whicharesometimestreatedwithinthe netictreebasedonDNAsequencesandmolphol- Thuidiaceae,shouldbedividedintotwofamilies: HTsuBoTA,T・ARIKAwA,H・AKⅣAMA,EDELuNA,D、GoNzALEz,MHIGucHIANDH・DEGucHI661

theThuidiaceaeandAnomodontaceae,support- tionoftheFontinalaceae. ingthesystemofMaedaetaL(2000),andBuck andGoffinet(2000). qWQpodnceae TheCyrtopodaceaeweretreatedintheLeuco‐ 比"CO伽"mceae,CrXpAaeaceae,α"‘Pjero6r〕ノa- dontalesbyVitt(1984),andBuckandVitt Ceae (1986)Jnthepresentinvestigation,theCyrtopo- MaedaetaL(2000)alsodiscussedthefamilial daceae,representedbyB“Che'eノノノa67evi/bノノα,B、 affinityofFolTsrroe〃α,showingrelationshipbe- e/egzJ"伽加α,andCWmp"sMos"s,appearedin tweentheCryphaeaceaeandLeucodontaceae・As apositionoutsidetheHypnales(s」at.[=sensu theytreatedonlytheleucodontaleanmossesfbr DeLunaetaL2000;BucketaL2000])-Hookeri- theiranalysis,thephylogeneticpositionfbrmem- alesclade,fionninganotableclade(100%LBPin ’ bersoftheorderinthepleurocarpswasnotso theMLtree)sistertotheHypnodendraceae・ clear・hthepresenttreesbasedonthelarge-scale BuckandGofY1net(2000)treatedtheCyrtopo- dataset,thetraditionalleucodontaleanmosses daceaeintheRhizogoniales,andthepresenttree fbrmfiourma]orandsomeminorcladesinthe supportstheirplacementofthefamily. combinedHypnales-Leucodontales,supporting thethreecladespresentedbyMaedaetaL(2000). ノVCcAe'αceaeα'1.k肋QpノM/αceae ThemembersoftheLeucodontaceae,exceptfbr Theotherrnembersofthetraditionalleucodon‐ Fo'Fsj7oe〃α,CryphaeaceaeandPterobryaceae taleanmosses,previouslytreatedastheNeckera- fbrmacladewithinthecladeoftheHypnales(s・ ceae,appearedasamajorcladewith86%LBP lat.[=sensuDeLunaetaL2000;sensuBucket support,asasistertotheLembophyllaceaeclade・ aL2000]).Fol《Woemza,amemberofthetradi- Intheclade,EcAj"o血"腕〃m6ros"maswellas tionalLeucodontales,isplacedinthecladenear A"o"TOC/O〃g〃αノヒI/jjandFo応sj'Ce"zjaspp、were theNeckeraceaeTheseresultsdidnotsupport alsoincluded theappearanceoftheleucodontaleanfamiliesin thecombinedHypnales(s・strl=sensuVitt C/〃αcjaceaeα"c/P/e"rozmpMノヒJceae l984])andLeucodontalesbyBucketaL(2000). TheClimaciaceaeandPleuroziopsidaceae fbnnedaweakclade(57%LBP,91%)nearthe Fa67o"mceae Stereophyllaceaelreland(1968)segregated TheFabroniaceaefbrmnonotablecladeinthe P/e"γozjqpsLsfiomtheClimaciaceaeintothemon- MLandconsensustrees,asshowntbeabove otypicfamilyPleuroziopsidaceaeNorrisandlgna- Furtherinvestigationswithadditionaltaxafi・om tov(2000)observedthestemsurfaceanatomyin othergenera,suchasFcJ6ro"jα,SbAw伽cハルeα, C/〃αcj"mandP/e"mzmp川,andsuggestedthat

, andSbhweなcAAcOpsjSareneeded. P/e"'ozmpsjSshouldbereturnedtotheClimaci- aceacOurtreesdonotconfIictwiththeirsug- Fo"""α/αceae gestiononP/e"rozjOpsjS,althoughthevalueof AlthoughonlyFo"/j"α/jJspecieswerein- P thesupportisnotsohigh cludedintheanalysis,theFontinalaceaeappear asasingleclade,atthemostbasalpositioninthe 3.Singlecostaanddoublecosta Hypnales-Leucodontalesclade,supportingthe Vitt1ssystem(1984)fbrtheclassiflcationof conclusionofVitt(1984)andBuck&Vitt hypnaleanmossessuggeststhatthegroupswitha (1986)Buck&Vitt(1986)constructedanew singlecosta,asrepresentedbytheBrachythecia- classificationfbrpleurocaIpousmosses,recir- ceaeandAmblystegiaceae,wouldhavediverged cumscribingtheHypnales(s・str.)includingthe fi・omthehypnaleanancestoratanearlyevolu- HypnodendrineaeandFontinalineaeOuranaly- tionarystage,fiollowedbythegroupswithadou‐ sessupporttheinclusionoftheFontinalineae blecosta,asrepresentedbytheHypnaceae,Se- withintheHypnales,butnottheinclusionofthe matophyllaceaeandEntodontaceae,whichhere- Hypnodendrineae、Furtheranalysisincluding gardedasthemostrecentevolutionarystageof somespeciesoftheFontinalaceae,especiallyan‐ theorderHypnales(sstr.[=sensuVittl984]) othergenusDjchel【Wlm,wouldclarifytheresolu‐ (seealsoTsubotaetaLl999;BucketaL2000). 662 HikobiaVoll3,No.4,2002

lnthepresentinvestigation,taxawithadouble Englishsummary) costaappearinvariouscladesofthetree・This Arikawa,T、&Higuchi,M1999.Phylogeneticanaly- resultsuggeststhatasinglecostaisanancestral sisofthePlagiotheciaceae(MuscOanditsrelatives character,andthatthereweremultipletransitions basedon/御6cLgenesequencesCryptogamie,Bry- toadoublecostaTherefbre,ourresultsofthe oL20:231-245. presentstudydonotconcurwiththesuggestion &Z002Phylogeneticpositionofthe proposedbyVitt(1984),andBuckandVitt generaLsOpte'f〕/gjOpsjFand比ノazOgjeノノα(Musci) (1986).OuranalysesconfirmtheHndingsbyDe basedonlbcLgenesequences・BryoLRes.(in LunaetaL(2000)andBucketaL(2000)thatthe press) Hypnales,togetherwithmostoftheleucodon- Buck,W,R」980AgenericrevisionoftheEntodon- taleangroups,fbnnamonophyleticsistergroup taceae.』・HattoriBotLab48:71-159. tothehookerialeanlineage・Resultsalsoshow &Goffmet,B、2000.Morphologyandclas‐ 、 thatthefamilialcircumscriptionwithintheHyp- sificationofmosses・In:A、J・Shaw&BGofHnet nalesandLeucodontalesshouldbereconsidered. (eds.),BryophyteBiology,pp71-123・Cambridge UniversityPress,Cambridge. -&Vitt,,.H」986SuggestionsfOranewfa- Acknowledgment milialclassificationofpleurocarpousmossesTax- on35:21-60 Thispaperisthecombinedresultofaninterna- tionalcollaborativeeffbrt、Wewouldliketoac- -,Goffinet,B&Shaw,A・I2000a・Testing knowledgeR.D・SeppeltfbrcheckingtheEng- morphologicalconceptsofordersofpleurocarpous lishtextandhelpfnlsuggestions;BGoffinetand (Bryophyta)usingphylogeneticreconstruc- W.R・BuckfbrredressingtheEnglishandfior tionsbasedon/r"L-ノノ侭"Fan。'ips4sequences・MoL PhyLEvoLl6:180-198. theircommentsandsuggestionsonanearlierver- &Z000hNovelrelation‐ sionofthispaper;MS・IgnatovandSHutmnen shipsinpleurocarpousmossesasrevealedbycp- fbrtheircommentsandsuggestionsonthephylo‐ DNAsequences・BryologistlO3:774-789. genetictrees;andBEstebanezfbrhergreathelp COX,CJ.,Goffinet,B,Newton,A、E、,Shaw,AJ& WealsotbankSMaedaandK・KCsugewith Hedderson,T,A、12000.Phylogeneticrelation- whomwehavecollaborated,MHasebeand,T shipsamongthediplolepideous-altematemosses Nishiyamafbrtechniqueofexperimentandad- ()inferredfiPomnuclearandchloroplast viceaboutphylogeneticanalysis,andN・Minaka DNAsequences.BryologistlO3:224-241. andMMiyafbrusageofPAUPRat・Researchon DeLuna,E,Newton,A、E,Withey,A、,Gonzalez,,. molecularsystematicsofmosseswasfUndedby &Mishler,BD、1999.Thetransitiontopleuro- thefbllowinggrants:KAKENHl(Japan)grants carpy:Aphylogeneticanalysisofthemaindiplo- O9839031toH、Akiyama,O9041165toJMurata, 、 lepidouslineagesbasedonr6cLsequencesandmor- ll640698toH・Deguchi,l3640707toMHigu- phology・BryologistlO2:634-650. chi,andl3740490toH・Tsubota;andCONA- ,Buck,WR.,Akiyama,H,Arikawa,T、,Tsubo- CYT(M6xico)grant27400-NtoEDeLunaet ta,H、,Gonzalez,,.,Newton,A、E&Shaw,A、J、 aL 2000.Ordinalphylogenywithintbehypnobryalean pleurocarpousmossesinferredfTomcladisticanaly- Literaturecited sesofthreechloroplastDNAsequencedatasets: /ノ・"L-F,ノアs4andノ・6cLBryologistlO3:242-256. Adachi,』.&Hasegawa,M1996ComputerScience Felsenstein,J・l98LEvolutionarytreesfromDNAse‐ Monographs,Z8MOLPHYversion23・Programs quences:amaximumlikelihoodapproachJ、MoL fbrmolecularphylogeneticsbasedonmaximum EvoL17:368-376. likelihoodl50pp、InstimteofStatisticalMathe‐ 1985.Confidencelimitsonphylogenies:an matics,Tokyo approachusingthebootstrapEvolution39: Ando,H1986.SmdiesonthegenusHyp"""ZHedw. 783-791. (1V)Hikobia9:467-484 Fitch,W・M197LTowarddefiningthecourseofevo- 1995.ThegenusHip"""?(Musci)inJapanlL lution:Minimumchangefbraspeciflctreetopol- Nat・EnvirSciRes、8:67-99.(inJapanese,with H・TsuBoTA,T・ARIKAwA,H・AKlYAMA,EDELuNA,D・OoNzALEz,MHIGucHlANDH・DEGucHI 663

ogy・Syst・ZooL20:406-416. r6cLMolPhyLEvoL7:377-393. Goffmet,B,Bayer,BJ.&Vitt,DHl998・Circum‐ Maeda,S,Kosuge,K,Gonzalez,,.,DeLuna,E& scriptionandphylogenyoftheOrthotrichales(Bry- Akiyama,H、2000.Molecularphylogenyofthe opsida)inferredfiPomr6cLsequenceanalysesAm suborderLeucodontineae(Musci;Leucodontales) JBot85:1324-1337. inferredfiPom'6cLsequencedata・JPlantRes、 Goldman,N、,Anderson,J、P.&Rodrigo,A・G・Z000 113:Z9-38 Likelihood-basedtestsoftopologiesinphylogenet- Magombo,Z・LK・ZOO2Thephylogenyofbasal ics、SystBioL49:652-670. peristomatemosses:evidencefiomcpDNA,and Hasegawa,M&Kishino,H・l994Accuraciesofthe implicationfbrperistomeevolutionSystBot.(in simplemethodsfbrestimatingthebootstrapprob- press). abilityofamaximumlikelihoodtree、MolBioL Manhart,J・Rl994Phylogeneticanalysisofgreen , EvoL11:142-145. plantノ"bcLsequences・MoLBiolEvo1.3:’14- &Yano,Tl985.Datingofthe 127. buman-apesplittingbyamolecularclockofmito- Mizushima,U」960.JapaneseEntodontaceaeJ・Hat- chondrialDNA.』・MolEvoL22:160-174. toriBot、Lab22:91-l58 Hedeniis,Ll990(1992).Taxonomicandnomencla‐ Murray,MG.&Thompson,WF・’980.Rapidisola- mralnotesonthegeneraCZJノノノeノ1go"e"αandB'で‐ tionofhighmolecularweightplantDNA・Nuc MerjqLindbergial6:161-168. AcidsRes」9:4321-4325. -1995.Highertaxonomiclevelrelationships Nishimura,N、,Higuchi,M,Seki,T&Ando,H, amongdiplolepidouspleurocalpousmosses-acla- 1984Delimitationandsubdivisionofthemoss disticoverview.』・BryoLl8:723-781. ftlmilyHypnaceaeJ、HattoriBot・Lab、55:227- 1996(1997)Acladisticevaluationofrela- 234 tionshipsbetweentheHookeriales,theSematophyl- Nixon,K・Cl999TheParsimonyRatchet,anew laceaeandsomeothertaxaLindbergia21:49-82 methodfbrrapidparsimonyanalysisCladistics 1997.A、evaluationofphylogeneticrela- l5:407-414. tionshipsamongtheThuidiaceae,theAmblystegia- Norris,,.H、&Ignatov,MS20000bservationson ceae,andthetemperatemembersoftheHypnaceac stemsurfaceanatomyinCノノ"1acjLlmandP/e"'ozJ‐ Lindbergia22:lOl-l33・ 叩叩(:Musci)Arctoa9:l51-154 Ireland,R、R・l968Pleuroziopsidaceae,anewfamily Pedersen,N、&Hedeniis,L2002Phylogenyofthe ofmosses.』・HattoriBotLab31:59-64. Plagiotheciaceaebasedonmolecularandmorpho- &Hasegawa,Ml989Evaluationofthemaxi- logicalevidence・BryologistlO5:310-324 mumlikelihoodestimateoftheevolutionarytree Saitou,N&Nei,M、1987.Theneighborjoining topologiesfiPomDNAsequencedata,andthe method:anewmethodfOrreconstructingphyloge- branchingorderinHominoidea.』・MoLEvoL29: netictrees・MolBioLEvoL4:406-425. P 170-179. 2000.Anothercalculationofthep-valuefbr Kishino,H、,Miyata,T&Hasegawa,M、1990.Maxi- theproblemofregionsusingthescaledbootstrap mumlikelihoodinferenceofproteinphylogeny, resamplings・TechRep・No.2000-35.Stanfbrd 回 andtheoriginofchloroplasts・lMoLEvoL31: Univ.,PaloAlto,Califbrnia. l51-l60 -2002.Anapproximatelyunbiasedtestofphy- Kruse,S,Martin,W、,Wehe,M&Reski,R1995. logenetictreeselectionSystBioL51:492-508. Anopenreadingframe(ycfll)isevolutionarycoL &1999Multiplecomparisonsof servedfiPomRTCyanobacteriatotheplastidDNAs log-likelihoodswithapplicationstophylogenetic ofArchegoniatesandGymnospermsisRTmodi- inference、MoLBioLEvoL16:lll4-lll6 HedintheplastidDNAsofDicotsandisnotplas‐ Shimodaira,H、&Hasegawa,M・Z001CONSELfbr tomeencodedinRTMonocots.』・PlantPhysioL assessingtheconfldenceofphylogenetictreeselec- l46:Z58-262 tionBioinfbrmaticsl7:l246-l24Z Lewis,LA.,Mishler,BD.&Vilgalys,R、1997. Sikes,D・S&Lewis,P、0.2001.PAUPRat:PAUP* Phylogeneticrelationshipsoftheliverworts(He- implementationoftheparsimonyratchet,betasofi- paticae),abasalembIyophytelineage,inferredffom ware,versionLDepartmentofEcologyandEvo- nucleotidesequencedataofthechloroplastgene lutionaryBiology,UniversityofConnecticut, 664 HikobiaVoLl3,No.4,2002

StolTs accessionnumber,localityandspecimennumber,or Strinmner,K&Haeseler,Avonl996Quartetpuz‐ referencesource・LeskeaceaeD"jAje"α叩ecjosLDsj"za zlingaquartetemaximum-likelihoodmethodfbr BrothexCardot,ABO19467,Japan,Shikoku,Kochi reconstructingtreetopologies・MolBioLEvoLl3: Pref,Monobe-mura,Befilkyo,950malt.,July27, 964-969. 1998,HAkiyamal4356(HYo),thissmdy;Amblyste- Swoffiord,,.L2002.PAUP*・PhylogeneticAnalysis giaceaeOmo"e"ノパo〃〃c伽'’1(Hedw)Spruce,AB UsingParsimony(*andOtherMethods).Version4 O95270,Japan,Honshu,Yamaguchi-ken,Shuhou-cho, SinauerAssociates,Sunderland,Massachusetts Akiyoshi-dai,Ca、lOOmalt.,August27,1998,H、 Tan,BC&Jia,Y、1998.Acladisticsmdyoffamily Tsubota4773(HIRO),thissmdy;Lembophyllaceae SematophyllaceaeinChinaJ・HattoriBot・Lab, Doノノc力o〃"j叩Lsme応j/b"伽(Mitt.)Nog,AB 84:49-55. O19465,Japan,Honshu,HyogoPref,Oya-cho,Ten- &’999.Apreliminaryrevisionof taki,June27,1998,HAkiyamal4252(HYo),this 亀 ChineseSematophyllaceae、JHattoriBotLab86: smdy;Sematophyllaceae〃伽CO"c、ノ(/bノノα(Cardot) l-70 H・ACrum,ABO95271,Japan,Kyushu,Kagoshima-ken, Tsubota,H、,Nakao,N、,Arikawa,T,Yamaguchi,T, YakushimalsL,Shiratani-unsuikyoGorge,600-900m Higuchi,M,DegUchi,H、&Seki,T・’999.Apre- alt.,March24,2002,HDegUchi36051(HIRO),this liminaryphylogenyofHypnales(Musci)asinferred study;HypnaceaeGo"α"jαノwgj"osa(Mitt.)Broth, fi・omchloroplastr6cLsequencedata・BIyoLRes、 ABO94341,Japan,Honshu,Nagano-ken,Shimo-ina-gun, 7:233-248 Minami-shinano-mura,KajitaniRiver,670-690malt・’ ,Yamaguchi,T,Seki,T&Deguchi, 0ct」9,2000,TArikawa2855(TNS),thisstudy;COノー H、2000.Preliminaryphylogeneticrelationshipsof ノα"jasp/e"。e"s(Iishiba)Nog,ABO94340,Japan, thegenusBro/〃eM/αanditsalliedgenera(Hyp‐ Honshu,Chiba-ken,Sanbu-gunNarutou-machi,Ca、 nales,Musci)basedonchloroplastr6cLsequence 5malt.,Dec、1,2000,colLTFuruki,inherbMHigu- dataJ・HattoriBot、Lab、88:79-99 chi39333(TNS),thissmdy;Climaciaceaedj"、c伽1 -,Akiyama,H、,Yamaguchi,T&Deguchi,H、 deノルojm(Hedw.)FWeber&DMohr,ABO19442, 2001aMolecularphylogenyoftheSematophyl- Japan,Honshu,MiePref,Nabari-shLNagaki,March laceae(Hypnales,Musci)basedonchloroplastlbcL l6,1998,HAkiyamal4150(HYo),thissmdy;C〃 sequences.J・HattoriBotLab90:221-240. "1αc川zノ叩o"jc""ZLindh,ABO19443,Japan,Honshu, &200lb・Molecular NaganoPrefljima-cho,ShiOjidaira,July28,1996,H phylogenyofthegenus刀jsmegjsrjaandrelated Akiyamal4376(HYo),thissmdy;NeckeraceaeBパー genera(SematophyllaceaaMusci)basedonchloro- Scノノαノノ"g"〃α(Mitt.)Broth,ABO94789,Japan,Hon- plastrbcLsequencesHikobial3:529-549. shu,NaraPref,Kamikitayama-mura,Odaigahara, Vanderpoorten,A、,Hedeniis,L,COX,Cl&Shaw,A, l450malt.,May26,1998,HAkiyamal4195(HYo), J2002Circumscription,classification,andtax- thisstudy;ハノO"!αノノαc/blIphzJs/αZgjo"/α""s(Mitt.)Dixon onomyofAmblystegiaceae()inferred &PdelaVarde,ABO94792,Japan,Shikoku,Kochi 1 fromnuclearandchloroplastDNAsequencedata Pref,Monobe-mura,Befilkyo,950malt.,July27, andmorphology・Taxon51:ll5-l22 1998,HAkiyamal4359(HYo),thisstudy;h、α/jo- Vitt,,.H、1984.ClassificationoftheBIyopsida・I、: `/e"。〉℃〃scallpeノノ(/b/伽(Mitt.)MFleischABO94788, ⑨ RMSchuster(ed.),NewManualofBIyology, Japan,Honshu,HyogoPref,Kamigori-chq VOL2,pp、696-759.HattoriBot・Lab,Nichinan Onaru-keikoku,250malt.,June17,1998,HAkiyama l4234(HYo),thisstudy;ノVecAcrqp伽〃j/jqMa(Mitt.) AppendixA・Infbnnationonspecimensfiomwhich MFleisch,ABO94790,Japan,Honshu,Okayama DNAwasextractedinthissmdy・ PrefNishiawakura-son,WakasugiPrimaryForest, Hereisalistoftaxawhoser6cLsequenceswereuti- LOOOmalt.,June17,1998,HAkiyamal4210(HYo), lizedinthissmdywiththeiraccessionnumbers,show- thisstudy;Pj""areノルα"16秒α(Bosch&SandeLac.) ingtheirsourcesandvoucherspecimeninfbnnation MF1eisch,ABO94787,Taiwan,Pingung,MtPeitawu, VoucherspecimensarekeptinHIRqHYo,orTNs・ l950malt.,August24,1988,H・AkiyamaTaiwan-l77 TreatmentoffhmiliesfbllowsVitt(1984)andBuck (HYo),thisstudy;Tham"o6ノWms"6se7iaj""z(Mittex andVitt(1986) SandeLac.)BCTan,ABO94791[as71ham"o6ノWm Thesequenceofinibrmationis:thenameoftaxon, sα"dejlJapan,Honshu,HyogoPref,Kamigori-cho, H・TsuBoTA,TARIKAwA,H、AKIYAMA,EDELuNA,D、GoNzALEz,MHIGucHlANDH、DEGucHI 665

Onam-keikoku,250malt.,Junel7,l99LH・Akiyama Scleanandourprogramsdownloadsite l423](HYo),thissmdy;LeucodontaceaeLezJcM)〃 <http://homehiroshima-uacjp/chubo/> scj"M伽(Hedw)SchwiigF.,ABO95988,Japan,Hon‐ Dα/αbQse shu,NiigataPref,Itoigawa-shi,Kotaki,300malt.,July DDBJ<http://www・ddbjnigacjp/〉 28,1994,HAkiyamal2594(HYo),thisstudyMyu- Sequencedatadownloadsite) ABO19466,Japan,Shikoku,KochiPref,Monobe‐ Accepted30・VIIL2002 mura,Befilkyo,July27,1998,H・Akiyamal4355

鰯 (HYo),thisstudy;Pterobryaceae伽c/(〕ノノollTqj"`/jczl'〃 坪田博美・有川智己・秋山弘之・ElTainDeLuna・DDlores Mitt.,ABO19464,Taiwan,Pingung,MtPeitawu,l950 Gonzalez・樋口正信・出口博則:葉緑体r6cL遺伝子の malt.,HAkiyamaTaiwan-50(HYo),thisstudy. 大データセットに基づく腋蘇類とくにハイゴケ科とその

公 周辺科の分子系統学的研究 AppendixBInternetresourcesfbrthephylogenetic analysisanddatabase ハイゴケロ・イタチゴケ目・アブラゴケ目を含む腋蘇 SMw”e 類の系統関係を,葉緑体mcL遺伝子の181の配列を含 CONSEL<http://wwwjsmacjp/~shimo/prog/consel/ indexhtml> む大データセットに基づいて解析を行った.解析の結 MOLPHY<fip://fipjsmacjp/pub/ISMLIB/MOLPHY/〉 果,ハイゴケ目とイタチゴケ目が-つの大きなクレー PAUP*<http://paupcsit・fSu・edu/> ドを形成したDeLuna他(2000)およびBuck他(2000) PAUPRat<http://viceroy・eehuconn・edu/paupratweb/ の結果を支持したが,Vitt(1984)のハイゴケ目および pauprathtm> イタチゴケ目それぞれの単系統性は支持されなかっ TREE-PUZZLE<http://www、tree-puzzlede/> た.

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