Harmful Algal Blooms: How Strong Is the Evidence That Nutrient Ratios and Forms Influence Their Occurrence?
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Probing the Changing Redfield Ratio of Phytoplankton
Probing the Changing Redfield Ratio of phytoplankton Supervisory Team Rosalind Rickaby www.earth.ox.ac.uk/people/rosalind-rickaby Katsumi Matsumoto www.esci.umn.edu/people/katsumi-matsumoto Key Research Question What controls the Redfield Ratio amongst algae? Overview under different conditions of Fe and C availability In 1934, Alfred Redfield made the notable to test the hypothesis that it is the nutrient observation that the relative ratios of C:N:P of efficiency of photosynthesis that dictates the C:N organic matter appeared to be constant throughout ratio of organic matter. the surface oceans, and also matched the Applicants would ideally have a background in dissolved ratios of those nutrients (C106N16P1). Biology/Chemistry/Earth Sciences or The Redfield ratio is fundamental in dictating the Environmental Sciences. strength of the biological sequestration of carbon, and the amount of oxygen that is used for respiration hence is an intimate control on the biotic feedback of phytoplankton on future climate. Despite efforts to understand the co-evolution of Methodology these ratios between the phytoplankton and the Methods to be used will include: Phytoplankton seawater from experimental, field observations Culture and sterile techniques, EA IRMS, and modelling efforts, there is still no mechanistic Spectrophotometry, and Microscopy. understanding of what drives the enormous variability seen across different phytoplankton lineages with various environmental conditions (Garcia et al., 2018). References & Further Reading Nature Geoscience -
University of Oklahoma
UNIVERSITY OF OKLAHOMA GRADUATE COLLEGE MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION SUBMITTED TO THE GRADUATE FACULTY in partial fulfillment of the requirements for the Degree of DOCTOR OF PHILOSOPHY By JOSHUA THOMAS COOPER Norman, Oklahoma 2017 MACRONUTRIENTS SHAPE MICROBIAL COMMUNITIES, GENE EXPRESSION AND PROTEIN EVOLUTION A DISSERTATION APPROVED FOR THE DEPARTMENT OF MICROBIOLOGY AND PLANT BIOLOGY BY ______________________________ Dr. Boris Wawrik, Chair ______________________________ Dr. J. Phil Gibson ______________________________ Dr. Anne K. Dunn ______________________________ Dr. John Paul Masly ______________________________ Dr. K. David Hambright ii © Copyright by JOSHUA THOMAS COOPER 2017 All Rights Reserved. iii Acknowledgments I would like to thank my two advisors Dr. Boris Wawrik and Dr. J. Phil Gibson for helping me become a better scientist and better educator. I would also like to thank my committee members Dr. Anne K. Dunn, Dr. K. David Hambright, and Dr. J.P. Masly for providing valuable inputs that lead me to carefully consider my research questions. I would also like to thank Dr. J.P. Masly for the opportunity to coauthor a book chapter on the speciation of diatoms. It is still such a privilege that you believed in me and my crazy diatom ideas to form a concise chapter in addition to learn your style of writing has been a benefit to my professional development. I’m also thankful for my first undergraduate research mentor, Dr. Miriam Steinitz-Kannan, now retired from Northern Kentucky University, who was the first to show the amazing wonders of pond scum. Who knew that studying diatoms and algae as an undergraduate would lead me all the way to a Ph.D. -
Protocols for Monitoring Harmful Algal Blooms for Sustainable Aquaculture and Coastal Fisheries in Chile (Supplement Data)
Protocols for monitoring Harmful Algal Blooms for sustainable aquaculture and coastal fisheries in Chile (Supplement data) Provided by Kyoko Yarimizu, et al. Table S1. Phytoplankton Naming Dictionary: This dictionary was constructed from the species observed in Chilean coast water in the past combined with the IOC list. Each name was verified with the list provided by IFOP and online dictionaries, AlgaeBase (https://www.algaebase.org/) and WoRMS (http://www.marinespecies.org/). The list is subjected to be updated. Phylum Class Order Family Genus Species Ochrophyta Bacillariophyceae Achnanthales Achnanthaceae Achnanthes Achnanthes longipes Bacillariophyta Coscinodiscophyceae Coscinodiscales Heliopeltaceae Actinoptychus Actinoptychus spp. Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Akashiwo Akashiwo sanguinea Dinoflagellata Dinophyceae Gymnodiniales Gymnodiniaceae Amphidinium Amphidinium spp. Ochrophyta Bacillariophyceae Naviculales Amphipleuraceae Amphiprora Amphiprora spp. Bacillariophyta Bacillariophyceae Thalassiophysales Catenulaceae Amphora Amphora spp. Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Anabaenopsis Anabaenopsis milleri Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema Anagnostidinema amphibium Anagnostidinema Cyanobacteria Cyanophyceae Oscillatoriales Coleofasciculaceae Anagnostidinema lemmermannii Cyanobacteria Cyanophyceae Oscillatoriales Microcoleaceae Annamia Annamia toxica Cyanobacteria Cyanophyceae Nostocales Aphanizomenonaceae Aphanizomenon Aphanizomenon flos-aquae -
Geohab Core Research Project
GEOHAB CORE RESEARCH PROJECT: HABs IN STRATIFIED SYSTEMS “Advances and challenges for understanding physical-biological interactions in HABs in Strati fied Environments” A Workshop Report ISSN 1538 182X GEOHAB GLOBAL ECOLOGY AND OCEANOGRAPHY OF HARMFUL ALGAL BLOOMS GEOHAB CORE RESEARCH PROJECT: HABs IN STRATIFIED SYSTEMS AN INTERNATIONAL PROGRAMME SPONSORED BY THE SCIENTIFIC COMMITTEE ON OCEANIC RESEARCH (SCOR) AND THE INTERGOVERNMENTAL OCEANOGRAPHIC COMMISSION (IOC) OF UNESCO Workshop on “ADVANCES AND CHALLENGES FOR UNDERSTANDING PHYSICAL-BIOLOGICAL INTERACTIONS IN HABs IN STRATIFIED ENVIRONMENTS” Edited by: M.A. McManus, E. Berdalet, J. Ryan, H. Yamazaki, J. S. Jaffe, O.N. Ross, H. Burchard, I. Jenkinson, F.P. Chavez This report is based on contributions and discussions by the organizers and participants of the workshop. TABLE OF CONTENTS This report may be cited as: GEOHAB 2013. Global Ecology and Oceanography of Harmful Algal Blooms, GEOHAB Core Research Project: HABs in Stratified Systems.W orkshop on "Advances and Challenges for Understanding Physical-Biological Interactions in HABs in Stratified Environments." (Eds. M.A. McManus, E. Berdalet, J. Ryan, H. Yamazaki, J.S. Jaffe, O.N. Ross, H. Burchard and F.P. Chavez) (Contributors: G. Basterretxea, D. Rivas, M.C. Ruiz and L. Seuront) IOC and SCOR, Paris and Newark, Delaware, USA, 62 pp. This document is GEOHAB Report # 11 (GEOHAB/REP/11). Copies may be obtained from: Edward R. Urban, Jr. Henrik Enevoldsen Executive Director, SCOR Intergovernmental Oceanographic Commission of College -
A Thesis Entitled Diel Vertical Distribution of Microcystis And
A Thesis entitled Diel Vertical Distribution of Microcystis and Associated Environmental Factors in the Western Basin of Lake Erie by Eva L. Kramer Submitted to the Graduate Faculty as partial fulfillment of the requirements for the Master of Science Degree in Biology ___________________________________________ Dr. Thomas Bridgeman, Committee Chair ___________________________________________ Dr. Timothy Davis, Committee Member ___________________________________________ Dr. Daryl Moorhead, Committee Member ___________________________________________ Dr. Cyndee Gruden, Dean College of Graduate Studies The University of Toledo December 2018 Copyright 2018, Eva Lauren Kramer This document is copyrighted material. Under copyright law, no parts of this document may be reproduced without the expressed permission of the author. An Abstract of Diel Vertical Distribution of Microcystis and Associated Environmental Factors in the Western Basin of Lake Erie by Eva L. Kramer Submitted to the Graduate Faculty as partial fulfillment of the requirements for the Master of Science Degree in Biology The University of Toledo December 2018 Harmful algal blooms comprised of the cyanobacteria Microcystis have recently caused multiple “do not drink” advisories in Ohio communities that draw their drinking water from Lake Erie, including the city of Toledo. Microcystis colonies are able to regulate their buoyancy and have a tendency to aggregate in thick scums at the water’s surface on a diel cycle under certain conditions. The city of Toledo’s drinking water intake draws water from near the bottom of the water column, thus a concentration of the bloom near the surface would present an opportunity to minimize Microcystis biomass and microcystin toxin entering the drinking water system. To better understand the vertical distribution of Microcystis over diel cycles, five temporally intensive sampling events were conducted from 2016-2017 under calm weather conditions near the drinking water intake in the western basin of Lake Erie. -
Harmful Algal Bloom Response Program
What are HABs? • Blue-green algae are bacteria that grow in water, contain chlorophyll, and can photosynthesize. They are not a new occurrence. WHEN IN DOUBT, STAY OUT! Kansas Department of Health • When these bacteria reproduce rapidly, For additional information: and Environment it can create a Harmful Algal Bloom (HAB). Please visit • HABs can sometimes produce toxins www.kdheks.gov/algae-illness. Harmful that affect people, pets, livestock, and Or call the KDHE HAB Hotline at wildlife. The toxins can affect the skin, 785-296-1664. liver, and nervous system. Algal Bloom • People and animals may be exposed to toxins via ingestion, skin contact, or Response inhalation of contaminated water. Program • The most common human health effects from HABs can include vomiting, diarrhea, skin rashes, eye irritation, and respiratory symptoms. • Boiling water does not remove or Department of Health inactivate toxins from blue-green algae, and Environment and there is no known antidote. • Animal deaths due to HAB toxins have Department of Health been documented, so: and Environment When in doubt, stay out! To protect and improve the health and environment of all Kansans. How else is KDHE working to What causes HABs? HAB Advisory Levels prevent HABs? Blue-green algae are a natural part of water- Threshold Levels based ecosystems. They become a problem Harmful Algal Blooms thrive in the presence when nutrients (phosphorus and nitrogen) are Watch Warning Closure of excess nutrients such as nitrogen and present in concentrations above what would phosphorus. Thus, KDHE continually works to occur naturally. Under these conditions, algae blue green reduce nutrient input and improve overall can grow very quickly to extreme numbers, cell counts 80,000 250,000 10,000,000 water quality through a series of interrelated resulting in a Harmful Algal Bloom. -
Harmful Algal Bloom Online Resources
Harmful Algal Bloom Online Resources General Information • CDC Harmful Algal Bloom-Associated Illnesses Website • CDC Harmful Algal Blooms Feature • EPA CyanoHABs Website • EPA Harmful Algal Blooms & Cyanobacteria Research Website • NOAA Harmful Algal Bloom Website • NOAA Harmful Algal Bloom and Hypoxia Research Control Act Harmful Algal Bloom Monitoring and Tracking • EPA Cyanobacteria Assessment Network (CyAN) Project • NCCOS Harmful Algal Bloom Research Website • NOAA Harmful Algal Bloom Forecasts • USGS Summary of Cyanobacteria Monitoring and Assessments in USGS Water Science Centers • WHO Toxic Cyanobacteria in water: A guide to their public health consequences, monitoring, and management Harmful Algal Blooms and Drinking Water • AWWA Assessment of Blue-Green Algal Toxins in Raw and Finished Drinking Water • EPA Guidelines and Recommendations • EPA Harmful Algal Bloom & Drinking Water Treatment Website • EPA Algal Toxin Risk Assessment and Management Strategic Plan for Drinking Water Document • USGS Drinking Water Exposure to Chemical and Pathogenic Contaminants: Algal Toxins and Water Quality Website Open Water Resources • CDC Healthy Swimming Website - Oceans, Lakes, Rivers • EPA State Resources Website • EPA Beach Act Website • EPA Beach Advisory and Closing On-line Notification (BEACON) • USG Guidelines for Design and Sampling for Cyanobacterial Toxin and Taste-and-Odor Studies in Lakes and Reservoirs • NALMS Inland HAB Program • NOAA Illinois-Indiana and Michigan Sea Grant Beach Manager’s Manual • USGS Field and Laboratory Guide -
Monitoreo De Microalgas De Ambientes Costeros De La Provincia De Buenos Aires Y Monitoreo De Toxinas En Moluscos Bivalvos
PROYECTO MARCO MONITOREO DE MICROALGAS DE AMBIENTES COSTEROS DE LA PROVINCIA DE BUENOS AIRES Y MONITOREO DE TOXINAS EN MOLUSCOS BIVALVOS Directora Científica: Eugenia A. Sar1 Coordinación Técnica: Andrea Lavigne2, Ramiro Duffard2 Grupo responsable: Inés Sunesen1, Andrea Lavigne2 Grupo responsable de muestreo: Inés Sunesen1, Andrea Lavigne2 1 Departamento Científico Ficología, Facultad de Ciencias Naturales y Museo, UNLP 2 Ministerio de Asuntos Agrarios, Dirección Provincial de Pesca. MORTANDAD MASIVA DE SARACAS (BREVOORTIA AUREA) EN LA PROVINCIA DE BUENOS AIRES INTRODUCCIÓN A partir del 4 de marzo se produjo una varazón masiva de saracas, Brevoortia aurea, en el área costera de la Provincia de Buenos Aires entre Samborombón y Mar Azul, República Argentina y en el área costera de los Departamentos de Canelones y Montevideo, República Oriental del Uruguay. Tanto el Instituto Nacional de Investigaciones y Desarrollo Pesquero (INIDEP) asesora de la Subsecretaría de Pesca y Acuicultura de la Nación (SSPyA), del Consejo Federal Pesquero (CFP) y de la Cancillería Argentina, Argentina, como la Dirección Nacional de Recursos Acuáticos (DINARA) dependiente del Ministerio de Agricultura Ganadería y Pesca de Uruguay determinaron que la presunción de que el evento se hubiera producido por un descarte de la flota pesquera comercial podía ser desestimada. La estimación de biomasa de peces muertos depositados en la costa argentina fue de 3000 toneladas (informe del INIDEP del 19 de marzo), sin embargo varazones menores continúan aún y fueron observadas en Mar Azul durante la campaña del del 30-03-15 (cuyo análisis de muestras está en procesamiento). Para esas fechas algunos peces llegaban vivos a la costa con señales de asfixia, por lo que no puede presumirse que hubieran muerto en aguas próximas a las playas tiempo antes. -
Fluorescence in Situ Hybridization Using 18S Rrna- Targeted Probe for Specific Detection of Thraustochytrids (Labyrinthulomycetes)
Plankton Benthos Res 2(2): 91–97, 2007 Plankton & Benthos Research © The Plankton Society of Japan Fluorescence in situ hybridization using 18S rRNA- targeted probe for specific detection of thraustochytrids (Labyrinthulomycetes) YOSHITAKE TAKAO1, YUJI TOMARU1, KEIZO NAGASAKI1, YUKARI SASAKURA2, RINKA YOKOYAMA2 & DAISKE HONDA2* 1 National Research Institute of Fisheries and Environment of Inland Sea, Fisheries Research Agency, 2–17–5 Maruishi, Hatsukaichi, Hiroshima 739–0452, Japan 2 Department of Biology, Faculty of Science and Engineering, Konan University, 8–9–1 Okamoto, Higashinada, Kobe 658–8501, Japan Received 5 December 2006; Accepted 13 March 2007 Abstract: Thraustochytrids are cosmopolitan osmotrophic or heterotrophic microorganisms that play, especially in coastal ecosystems, important roles as decomposers and producers of polyunsaturated fatty acids (PUFA), and are also known to be pathogens of mollusks and seaweeds. However, because of shortcomings in the current methods for detec- tion and enumeration of thraustochytrids, very little information is available concerning their natural dynamics and eco- logical roles. In this study, we propose a new method for detecting thraustochytrids using a fluorescent 18S ribosomal RNA (rRNA)-targeted oligonucleotide probe (Probe ThrFL1). Detection of thraustochytrids by means of the fluores- cence in situ hybridization (FISH) technique with ThrFL1 was specific; the probe did not react with the other stra- menopile organisms or with the dinoflagellate that was tested. Because of the high specificity and intense reactivity, the FISH protocol is expected to be a strong tool for examining ecological features of thraustochytrids. Key words: Aurantiochytrium, Decomposer, FISH method, Schizochytrium, Thraustochytrium tance as decomposers (Raghukumar et al. 2001). In addi- Introduction tion, due to their high productivity of PUFAs such as do- Thraustochytrids are cosmopolitan apochlorotic stra- cosahexaenoic acid and docosapentaenoic acid (Nakahara menopile protists classified in the class Labyrinthu- et al. -
Harmful Algal Blooms
NSF GK-12 Graduate Fellows Program Award # DGE-0139171 University of North Carolina at Wilmington Harmful Algal Blooms by Tika Knierim, Department of Chemistry This activity is aligned with the 2001 North Carolina Standard Course of Study for 8th Grade Science: Goal # 1 & 2 Algal species sometimes make their presence known as a massive “bloom” of cells that may discolor the water These “blooms” alter marine habitats Every coastal state has reported major blooms Although they are referred to as harmful algal blooms, not all HABs are toxic Toxic blooms are caused by algae that produce potent toxins that can cause massive fish kills, marine mammal deaths, and human illness There are several types of toxins produced by these harmful algae. .commonly the toxins affect the functioning of nerve and muscle cells Toxic blooms have been responsible for causing diarrhea, vomiting, numbness, dizziness, paralysis, and even death The key is how the toxins move through the food web The key to this scenario is bioaccumulation!! BIOACCUMULATION is the process by which compounds accumulate or build up in an organism at a faster rate than they can be broken down. Some organisms, such as krill, mussels, anchovies, and mackerel, have been found to retain toxins in their bodies Today we are going to do a little activity in order to better understand the concept of bioaccumulation and how toxins are transferred through the food chain. Each person will be assigned one of the following organisms: Krill: Seal: Fish: Killer Whale: There is an outbreak of a Harmful Algal Bloom within the boundaries of this classroom, and there is algae (green beads) spread all over the area. -
Preliminary Study on Vertical Migrations of Dinoflagellates in a Dynamic Coastal Sea (Gulf of Trieste, Northern Adriatic)
ISSN: 0001-5113 ACTA ADRIAT., UDC: 582.276(262.3.04) AADRAY 53(2): 181 - 188, 2012 (450.361 Trst) 581.522.6 Preliminary study on vertical migrations of dinoflagellates in a dynamic coastal sea (Gulf of Trieste, northern Adriatic) Janja fRANCÉ* and Patricija MOzETIČ National Institute of Biology, Marine Biology Station, Fornače 41, 6330 Piran, Slovenia *Corresponding author, e-mail: [email protected] The purpose of this preliminary study was to define the vertical migration pattern in the dinoflagellate community in the shallow coastal sea. Migrations were followed in an area of mussel farming, through two 24-hour samplings, first during mixed and second during stratified water column conditions. Despite variable physical environment we were able to follow vertical migrations of some autotrophic dinoflagellate species in the period of stratified water column. The results also suggest that Heterocapsa sp. may preserve its vertical migration pattern also under mixed conditions. Migrations were observed also for Dinophysis sacculus that can cause DSP problems in the area. Key words: dinoflagellates, vertical migrations, dynamic environment, coastal sea, Adriatic INTRODUCTION of migratory behaviour. The majority of stud- ies of vertical migration have been conducted Vertical migration as one of advantageous under controlled conditions on isolated or cul- characteristics of dinoflagellates (SMAyDA, 1997) tured dinoflagellate species (hEANEy & EPP- permits these organisms to access the water layer LEy, 1981; kAMykOWSkI, 1981; MACINTyRE et with an adequate quantity of inorganic nutrients, al., 1997), whereas in situ studies are fewer since thereby improving their retrieval. Consequently, they offer less understanding of dinoflagellates’ the benefit of migration is especially evident physiological responses, but, on the other hand, present a true combination of environmental under stratified water column conditions where stresses. -
Ch. 9: Ocean Biogeochemistry
6/3/13 Ch. 9: Ocean Biogeochemistry NOAA photo gallery Overview • The Big Picture • Ocean Circulation • Seawater Composition • Marine NPP • Particle Flux: The Biological Pump • Carbon Cycling • Nutrient Cycling • Time Pemitting: Hydrothermal venting, Sulfur cycling, Sedimentary record, El Niño • Putting It All Together Slides borrowed from Aradhna Tripati 1 6/3/13 Ocean Circulation • Upper Ocean is wind-driven and well mixed • Surface Currents deflected towards the poles by land. • Coriolis force deflects currents away from the wind, forming mid-ocean gyres • Circulation moves heat poleward • River influx is to surface ocean • Atmospheric equilibrium is with surface ocean • Primary productivity is in the surface ocean Surface Currents 2 6/3/13 Deep Ocean Circulation • Deep and Surface Oceans separated by density gradient caused by differences in Temperature and Salinity • This drives thermohaline deep circulation: * Ice forms in the N. Atlantic and Southern Ocean, leaving behind cold, saline water which sinks * Oldest water is in N. Pacific * Distribution of dissolved gases and nutrients: N, P, CO2 Seawater Composition • Salinity is defined as grams of salt/kg seawater, or parts per thousand: %o • Major ions are in approximately constant concentrations everywhere in the oceans • Salts enter in river water, and are removed by porewater burial, sea spray and evaporites (Na, Cl). • Calcium and Sulfate are removed in biogenic sediments • Magnesium is consumed in hydrothermal vents, in ionic exchange for Ca in rock. • Potassium adsorbs in clays. 3 6/3/13 Major Ions in Seawater The Two-Box Model of the Ocean Precipitation Evaporation River Flow Upwelling Downwelling Particle Flux Sedimentation 4 6/3/13 Residence time vs.