Tree of the Year 2009 Searsia Lancea Karee
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Annual Report 2017
3 CONTACT DETAILS Dean Prof Danie Vermeulen +27 51 401 2322 [email protected] MARKETING MANAGER ISSUED BY Ms Elfrieda Lötter Faculty of Natural and Agricultural Sciences +27 51 401 2531 University of the Free State [email protected] EDITORIAL COMPILATION PHYSICAL ADDRESS Ms Elfrieda Lötter Room 9A, Biology Building, Main Campus, Bloemfontein LANGUAGE REVISION Dr Cindé Greyling and Elize Gouws POSTAL ADDRESS University of the Free State REVISION OF BIBLIOGRAPHICAL DATA PO Box 339 Dr Cindé Greyling Bloemfontein DESIGN, LAYOUT South Africa )LUHÀ\3XEOLFDWLRQV 3W\ /WG 9300 PRINTING Email: [email protected] SA Printgroup )DFXOW\ZHEVLWHZZZXIVDF]DQDWDJUL 4 NATURAL AND AGRICULTURAL SCIENCES REPORT 2017 CONTENT PREFACE Message from the Dean 7 AGRICULTURAL SCIENCES Agricultural Economics 12 Animal, Wildlife and Grassland Sciences 18 Plant Sciences 26 Soil, Crop and Climate Sciences 42 BUILDING SCIENCES Architecture 50 Quantity Surveying and Construction Management 56 8UEDQDQG5HJLRQDO3ODQQLQJ NATURAL SCIENCES Chemistry 66 Computer Sciences and Informatics 80 Consumer Sciences 88 Genetics 92 Geography 100 Geology 106 Mathematical Statistics and Actuarial Science 112 Mathematics and Applied Mathematics 116 Mathematics 120 0LFURELDO%LRFKHPLFDODQG)RRG%LRWHFKQRORJ\ Physics 136 Zoology and Entomology 154 5 Academic Centres Disaster Management Training and Education Centre of Africa - DiMTEC 164 Centre for Environmental Management - CEM 170 Centre for Microscopy 180 6XVWDLQDEOH$JULFXOWXUH5XUDO'HYHORSPHQWDQG([WHQVLRQ Paradys Experimental Farm 188 Engineering Sciences 192 Institute for Groundwater Studies 194 ACADEMIC SUPPORT UNITS Electronics Division 202 Instrumentation 206 STATISTICAL DATA Statistics 208 LIST OF ACRONYMS List of Acronyms 209 6 NATURAL AND AGRICULTURAL SCIENCES REPORT 2017 0(66$*( from the '($1 ANNUAL REPORT 2016 will be remembered as one of the worst ±ZKHUHHDFKELQFRXOGFRQWDLQDXQLTXHSURGXFWDQG years for tertiary education in South Africa due once a product is there, it remains. -
DISSERTATION O Attribution
COPYRIGHT AND CITATION CONSIDERATIONS FOR THIS THESIS/ DISSERTATION o Attribution — You must give appropriate credit, provide a link to the license, and indicate if changes were made. You may do so in any reasonable manner, but not in any way that suggests the licensor endorses you or your use. o NonCommercial — You may not use the material for commercial purposes. o ShareAlike — If you remix, transform, or build upon the material, you must distribute your contributions under the same license as the original. How to cite this thesis Surname, Initial(s). (2012). Title of the thesis or dissertation (Doctoral Thesis / Master’s Dissertation). Johannesburg: University of Johannesburg. Available from: http://hdl.handle.net/102000/0002 (Accessed: 22 August 2017). Ethnobotanical uses, anatomical features, phytochemical properties, antimicrobial activity, and cytotoxicity of the Sotho medicinal plant Searsia erosa (Anacardiaceae) BY Nhlamulo Nomsa Mashimbye Dissertation submitted in fulfilment of the requirements for the degree of Masters in Botany In Botany and Plant Biotechnology Faculty of Science University of Johannesburg Supervisor: Professor A Moteetee Co-supervisor: Dr A Oskolskii Co-supervisor: Professor S van Vuuren (University of the Witwatersrand) April, 2019 Dedication I dedicate this dissertation to my mothers, Mrs T. A Mashimbye and Mrs Maluleke for raising my child while I continued with my research project, my daughter R. T Maluleke for putting up with my absence, and God, without whom this would not have been possible. iii Acknowledgements I would like to express my deepest appreciation to the following people for their support and contribution toward the completion of this research project: • My supervisor, Prof, A. -
Tree Species Diversity of Agro- and Urban Ecosystems Within the Welgegund Atmospheric Measurement Station Fetch Region
Tree species diversity of agro- and urban ecosystems within the Welgegund Atmospheric Measurement Station fetch region L Knoetze 21215294 Dissertation submitted in fulfillment of the requirements for the degree Magister Scientiae in Environmental Sciences at the Potchefstroom Campus of the North-West University Supervisor: Prof SJ Siebert Co-supervisor: Dr DP Cilliers October 2017 DECLARATION I declare that the work presented in this Masters dissertation is my own work, that it has not been submitted for any degree or examination at any other university, and that all the sources I have used or quoted have been acknowledged by complete reference. Signature of the Student:………………………………………………………… Signature of the Supervisor:………………………………………………………. Signature of the Co-supervisor:………………………………………………………… i ABSTRACT Rapid worldwide urbanisation has noteworthy ecological outcomes that shape the patterns of global biodiversity. Habitat loss, fragmentation, biological invasions, climate- and land-use change, alter ecosystem functioning and contribute to the loss of biodiversity. This warrants the study of urban ecosystems and their surrounding environments since biodiversity is essential for economic success, ecosystem function and stability as well as human survival, due to the fact that it provides numerous ecosystem goods and services. Furthermore, agroecosystems are continuously expanding to meet human needs and play a distinctive role in supplying and demanding ecosystem services, consequently impacting biodiversity. With anthropogenic impacts on ecosystems increasing exponentially, pressure on ecosystem services are intensifying and ultimately unique urban environments that are perfect for the establishment of alien species is created. The proportion of native species in urban areas has increasingly been reduced due to urbanisation, while the proportion of alien species has markedly increased. -
Stem and Leaf Anatomy of Searsia Glutinosa Subsp Abyssinica ( Synonym: Rhus Abyssinica) ( Anacaridaceae) from Erkwit, Sudan
EUROPEAN ACADEMIC RESEARCH Vol. VI, Issue 11/ February 2019 Impact Factor: 3.4546 (UIF) ISSN 2286-4822 DRJI Value: 5.9 (B+) www.euacademic.org Stem and Leaf Anatomy of Searsia glutinosa subsp abyssinica ( synonym: Rhus abyssinica) ( Anacaridaceae) from Erkwit, Sudan IKRAM MADANI1 AMIR FAROUK Department of Botany, Faculty of Science University of Khartoum, Sudan Abstract In this paper the anatomy of Searsia glutinosa subsp abyssinica from the family Anacardiaceae was studied. Plant specimens were collected from its natural habitat in Erkwit area in the Red sea state, Sudan. Fresh samples of stem and leaf parts were preserved using a fixative solution containing formalin, acetic acid, and alcohol. Transverse sections of stem and leaf were prepared using standard sectioning technique. Staining was done using Haematoxilin mier´s stain. General and characteristic features of the stem and leaf were studied under the light microscope and documented by coloured photographs. Results of this study revealed that some features are of taxonomic value such as the shape and position of the resin canals, the shape of the ducts Lumen, and types and distribution of hairs and glands. The resin canals are located in the past fibers of the vascular bundles and in the pith. Short- stalked glandular hairs are observed in lower surface of the leaves near the midrib. Stem possesses equally active cambium. Key words: Anatomy; Searsia glutinosa; Anacaridaceae; Erkwit; Sudan 1 Corresponding author: [email protected] 6194 Ikram Madani, Amir Farouk- Stem and Leaf Anatomy of Searsia glutinosa subsp abyssinica ( synonym: Rhus abyssinica) ( Anacaridaceae) from Erkwit, Sudan INTRODUCTION: Searsia glutinosa subsp abyssinica ( Synonym: Rhus abysinica) of the family Anacardiaceae is a shrub up to 7 m high. -
Plant Press, Vol. 19, No. 4
Department of Botany & the U.S. National Herbarium The Plant Press New Series - Vol. 19 - No. 4 October-December 2016 Botany Profile We Are All Lichens By Manuela Dal Forno o you remember the question in biomes revealed the existence of diverse not always been a highly visible field Introductory Biology 101, “What communities of bacteria in addition to the and people are not generally aware Dare lichens?” According to tradi- two dominant partners (Gonzáles et al. that lichens are a significant part of the tional concepts, a lichen is the resulting 2005 FEMS Microbiol. Ecol. 54: 401–415; ecosystem. structure (known as a thallus) from the Cardinale et al. 2006 FEMS Microbiol. symbiosis between a fungal partner (the Ecol. 57: 484–495, Cardinale et al. 2008 n September, a recent paper about mycobiont) and an algal-like partner (the FEMS Microbiol. Ecol. 66: 63–71). Most “plant blindness” (Balding & Wil- photobiont), either a green alga and/or of these studies have focused on bacte- Iliams 2016 Conserv. Biol.) and a cyanobacterium (“blue-green alga”). rial diversity and their potential roles in follow-up commentary article (Das- Lichens play important roles in the the lichenization process (Grube et al. gupta 2016 https://news.mongabay. environments they live in, participating 2009 ISME J. 3: 1105–1115; Hodkinson com/2016/09/can-plant-blindness-be- in nutrient and water cycles and particu- & Lutzoni 2009 Symbiosis 49: 163–180; cured/) was circulated among cowork- larly nitrogen fixation, forming biologi- Bates et al. 2011 Appl. Environ. Microbiol. ers in the Smithsonian’s Department cal soil crusts, and serving for animals 77: 1309–1314; Hodkinson et al. -
WRA Species Report
Family: Anacardiaceae Taxon: Spondias purpurea 'Wild Type' Synonym: Spondias cirouella Tussac Common Name: Hog plum Purple mombin Red mombin Spanish plum Jocote Questionaire : current 20090513 Assessor: Chuck Chimera Designation: EVALUATE Status: Assessor Approved Data Entry Person: Chuck Chimera WRA Score 5 101 Is the species highly domesticated? y=-3, n=0 n 102 Has the species become naturalized where grown? y=1, n=-1 103 Does the species have weedy races? y=1, n=-1 201 Species suited to tropical or subtropical climate(s) - If island is primarily wet habitat, then (0-low; 1-intermediate; 2- High substitute "wet tropical" for "tropical or subtropical" high) (See Appendix 2) 202 Quality of climate match data (0-low; 1-intermediate; 2- High high) (See Appendix 2) 203 Broad climate suitability (environmental versatility) y=1, n=0 y 204 Native or naturalized in regions with tropical or subtropical climates y=1, n=0 y 205 Does the species have a history of repeated introductions outside its natural range? y=-2, ?=-1, n=0 y 301 Naturalized beyond native range y = 1*multiplier (see y Appendix 2), n= question 205 302 Garden/amenity/disturbance weed n=0, y = 1*multiplier (see Appendix 2) 303 Agricultural/forestry/horticultural weed n=0, y = 2*multiplier (see n Appendix 2) 304 Environmental weed n=0, y = 2*multiplier (see n Appendix 2) 305 Congeneric weed n=0, y = 1*multiplier (see Appendix 2) 401 Produces spines, thorns or burrs y=1, n=0 n 402 Allelopathic y=1, n=0 403 Parasitic y=1, n=0 n 404 Unpalatable to grazing animals y=1, n=-1 n 405 Toxic -
Diversidad Genética Y Relaciones Filogenéticas De Orthopterygium Huaucui (A
UNIVERSIDAD NACIONAL MAYOR DE SAN MARCOS FACULTAD DE CIENCIAS BIOLÓGICAS E.A.P. DE CIENCIAS BIOLÓGICAS Diversidad genética y relaciones filogenéticas de Orthopterygium Huaucui (A. Gray) Hemsley, una Anacardiaceae endémica de la vertiente occidental de la Cordillera de los Andes TESIS Para optar el Título Profesional de Biólogo con mención en Botánica AUTOR Víctor Alberto Jiménez Vásquez Lima – Perú 2014 UNIVERSIDAD NACIONAL MAYOR DE SAN MARCOS (Universidad del Perú, Decana de América) FACULTAD DE CIENCIAS BIOLÓGICAS ESCUELA ACADEMICO PROFESIONAL DE CIENCIAS BIOLOGICAS DIVERSIDAD GENÉTICA Y RELACIONES FILOGENÉTICAS DE ORTHOPTERYGIUM HUAUCUI (A. GRAY) HEMSLEY, UNA ANACARDIACEAE ENDÉMICA DE LA VERTIENTE OCCIDENTAL DE LA CORDILLERA DE LOS ANDES Tesis para optar al título profesional de Biólogo con mención en Botánica Bach. VICTOR ALBERTO JIMÉNEZ VÁSQUEZ Asesor: Dra. RINA LASTENIA RAMIREZ MESÍAS Lima – Perú 2014 … La batalla de la vida no siempre la gana el hombre más fuerte o el más ligero, porque tarde o temprano el hombre que gana es aquél que cree poder hacerlo. Christian Barnard (Médico sudafricano, realizó el primer transplante de corazón) Agradecimientos Para María Julia y Alberto, mis principales guías y amigos en esta travesía de más de 25 años, pasando por legos desgastados, lápices rotos, microscopios de juguete y análisis de ADN. Gracias por ayudarme a ver el camino. Para mis hermanos Verónica y Jesús, por conformar este inquebrantable equipo, muchas gracias. Seguiremos creciendo juntos. A mi asesora, Dra. Rina Ramírez, mi guía académica imprescindible en el desarrollo de esta investigación, gracias por sus lecciones, críticas y paciencia durante estos últimos cuatro años. A la Dra. Blanca León, gestora de la maravillosa idea de estudiar a las plantas endémicas del Perú y conocer los orígenes de la biodiversidad vegetal peruana. -
Antimycobacterial Activity and Low Cytotoxicity of Leaf Extracts of Some African
Antimycobacterial activity and low cytotoxicity of leaf extracts of some African Anacardiaceae tree species. Short Title: Antimycobacterial and cytotoxicity of Anacardiaceae tree species Prudence N. Kabongo-Kayoka1,2, Jacobus N. Eloff2, Chikwelu L. Obi3, Lyndy J. McGaw2 1Department of Agriculture and Animal Health, College of Agriculture and Environmental Sciences, University of South Africa, Private Bag X 6, Florida 1710, South Africa; [email protected] 2Phytomedicine Programme, Department of Paraclinical Sciences, Faculty of Veterinary Science, University of Pretoria, Private Bag X04, Onderstepoort 0110, South Africa 3Division of Academic Affairs, University of Fort Hare, Alice 5700, South Africa *Corresponding author. E-mail address: [email protected] (P.N. Kabongo-Kayoka) Treatment of tuberculosis is a challenge due to multi and extremely drug resistant strains of Mycobacterium tuberculosis. Plant species contain antimicrobial compounds that may lead to new anti-TB drugs. Previous screening of some tree species from the Anacardiaceae family revealed the presence of antimicrobial activity, justifying further investigations. Leaf extracts of 15 Anacardiaceae tree species were screened for antimycobacterial activity using a twofold serial microdilution assay against the pathogenic Mycobacterium bovis and multidrug resistant M. tuberculosis and rapidly growing mycobacteria, Mycobacterium smegmatis, Mycobacterium fortuitum and Mycobacterium aurum. The vaccine strain, M. bovis and an avirulent strain, H37Ra M. tuberculosis, were also used. Cytotoxicity was assessed using a colorimetric assay against Vero kidney, human hepatoma and murine macrophage cells. Four out of 15 crude acetone extracts showed significant antimycobacterial activity with MIC varying from 50 to 100µg/mL. Searsia undulata had the highest activity against most mycobacteria, followed by Protorhus longifolia. -
Phylogeny Within the Anacardiaceae Predicts Host Range of Potential Biological Control Agents of Brazilian Peppertree ⇑ G.S
Biological Control 108 (2017) 22–29 Contents lists available at ScienceDirect Biological Control journal homepage: www.elsevier.com/locate/ybcon Phylogeny within the Anacardiaceae predicts host range of potential biological control agents of Brazilian peppertree ⇑ G.S. Wheeler , P.T. Madeira Invasive Plant Research Laboratory, USDA-ARS, 3225 College Avenue, Ft. Lauderdale, FL 33314, USA highlights graphical abstract Phylogenetic signal of plant species may predict host range of biocontrol agents. We calculated phylogenetic distances between species with combined ITS1 and trnL-F. Host range of recommended agents decreased steeply with phylogenetic distance. Phylogenetic distance had greater influence on recommended than rejected species. Phylogenetic distance can predict of host range and can assist in test plant lists. article info abstract Article history: Predicting the host range of a biological control agent prior to release is one of the most important steps Received 30 November 2016 in the development of new agents. Knowing which species are most at risk of this non-target damage Revised 23 January 2017 improves the predictability of these tests. To predict safety, the potential agent is exposed to a subset Accepted 31 January 2017 of the entire flora that represents valued native, agricultural and ornamental plant species. The list of Available online 2 February 2017 plants includes those species that are the closest relatives to the target weed. To identify these species, molecular phylogenies can be useful tools that potentially identify the most vulnerable plant species. Keywords: While conducting biological control research of the invasive weed Brazilian peppertree, Schinus tere- Phylogenetic distance binthifolia, we conducted nuclear ITS1 and chloroplast trnL-F analysis of agricultural, commercial and Schinus terebinthifolia Anacardiaceae native plants that are related to the weed. -
Kirstenbosch NBG List of Plants That Provide Food for Honey Bees
Indigenous South African Plants that Provide Food for Honey Bees Honey bees feed on nectar (carbohydrates) and pollen (protein) from a wide variety of flowering plants. While the honey bee forages for nectar and pollen, it transfers pollen from one flower to another, providing the service of pollination, which allows the plant to reproduce. However, bees don’t pollinate all flowers that they visit. This list is based on observations of bees visiting flowers in Kirstenbosch National Botanical Garden, and on a variety of references, in particular the following: Plant of the Week articles on www.PlantZAfrica.com Johannsmeier, M.F. 2005. Beeplants of the South-Western Cape, Nectar and pollen sources of honeybees (revised and expanded). Plant Protection Research Institute Handbook No. 17. Agricultural Research Council, Plant Protection Research Institute, Pretoria, South Africa This list is primarily Western Cape, but does have application elsewhere. When planting, check with a local nursery for subspecies or varieties that occur locally to prevent inappropriate hybridisations with natural veld species in your vicinity. Annuals Gazania spp. Scabiosa columbaria Arctotis fastuosa Geranium drakensbergensis Scabiosa drakensbergensis Arctotis hirsuta Geranium incanum Scabiosa incisa Arctotis venusta Geranium multisectum Selago corymbosa Carpanthea pomeridiana Geranium sanguineum Selago canescens Ceratotheca triloba (& Helichrysum argyrophyllum Selago villicaulis ‘Purple Turtle’ carpenter bees) Helichrysum cymosum Senecio glastifolius Dimorphotheca -
DNA Barcoding and Phylogenetic Analysis of Searsia
Poster ID : 828 DNA barcoding and phylogenetic analysis of Searsia Makhado Tshililo, Michelle van der Bank and Sanele N. S. Shiba The African Centre for DNA Barcoding (ACDB), Department of Botany & Plant Biotechnology, University of Johannesburg, South Africa ABSTRACT Background. The family Anacardiaceae includes approximately 800 species in 82 genera. Rhus L. is the largest and most widely distributed genus in Anacardiaceae. However, controversy has surrounded the delimitation of the genus. Searsia F.A. Barkley was originally included into the Rhus complex but recent molecular studies have separated it along with six other genera from the Rhus complex and recognised them as separate genera. The genus Searsia, which is the focus of the current study, is represented by approximately 120 species and is widely distributed in Africa with only three species currently known from Asia. Here we include an extensive sampling and molecular analyses of Searsia species across its distribution range in Africa to access the relationships within the genus. Results. In total 205 taxa, representing 35 species of Searsia, were sequenced for the core barcoding regions (matK and rbcLa) along with additional markers, i.e. ITS, ETS, trnL-F and ndhF. Significance. This study contributes a first large sampling of Searsia. An infrageneric classification for the genus will be presented. Anacardium occidentale AY594459 Anacardium occidentale OM3645 Anacardium occidentale GH0152 Trichoscypha acuminata MPADN0277 Trichoscypha arborea MPADN0003Anacardium excelsum GQ9 -
Landscape Units of Mokala National Park, Northern Cape Province, South Africa
ISSN 0067-9208 NATURAL SCIENCES VOLUME 31, PART 1 NOVEMBER 2015 Landscape units of Mokala National Park, Northern Cape Province, South Africa by H. Bezuidenhout1*, 2, P.L. Bradshaw3, 4, M. Bradshaw5 & P.C. Zietsman6, 7 1 South African National Parks, Scientific Services, Kimberley office, P.O. Box 110040, Hadison Park, 8306, South Africa E-mail: [email protected] 2 Applied Behavioural Ecology and Ecosystem Research Unit, UNISA, Private Bag X6, Florida, 1717, South Africa 3 Conservation Services, Park Planning and Development, South African National Parks, Nelson Mandela Metropolitan University, P.O. Box 76693, Port Elizabeth, 6031, South Africa 4 Department of Botany, Nelson Mandela Metropolitan University, P.O. Box 77000, Port Elizabeth, 6032, South Africa 5 Port Elizabeth Museum at Bayworld, P.O. Box 13147, Humewood, 6013, South Africa 6 Department of Botany, National Museum, P.O. Box 266, Bloemfontein, 9300, South Africa 7 Centre for Environmental Management, University of the Free State, Bloemfontein, 9300, South Africa * Corresponding author ABSTRACT Bezuidenhout, H., Bradshaw, P.L., Bradshaw, M. & Zietsman, P.C. 2015. Landscape units of Mokala National Park, Northern Cape Province, South Africa. Navors. nas. Mus., Bloemfontein 31(1): 1-27. The relatively newly proclaimed Mokala National Park, following the deproclamation of Vaalbos National Park, lacked an ecological landscape unit classification (description and mapping) of the conservation area. Nine landscape units and one degraded area were classified, mapped and described. This has already been used to make informed decisions on vegetation and animal conservation, and tourism management in the park. (classification, landscape unit, vegetation, Mokala National Park, habitat description) ISBN 978-1-86847-169-0 2 Navors.