Trace Fossil Evidence of Coral- Inhabiting Crabs
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A Classification of Living and Fossil Genera of Decapod Crustaceans
RAFFLES BULLETIN OF ZOOLOGY 2009 Supplement No. 21: 1–109 Date of Publication: 15 Sep.2009 © National University of Singapore A CLASSIFICATION OF LIVING AND FOSSIL GENERA OF DECAPOD CRUSTACEANS Sammy De Grave1, N. Dean Pentcheff 2, Shane T. Ahyong3, Tin-Yam Chan4, Keith A. Crandall5, Peter C. Dworschak6, Darryl L. Felder7, Rodney M. Feldmann8, Charles H. J. M. Fransen9, Laura Y. D. Goulding1, Rafael Lemaitre10, Martyn E. Y. Low11, Joel W. Martin2, Peter K. L. Ng11, Carrie E. Schweitzer12, S. H. Tan11, Dale Tshudy13, Regina Wetzer2 1Oxford University Museum of Natural History, Parks Road, Oxford, OX1 3PW, United Kingdom [email protected] [email protected] 2Natural History Museum of Los Angeles County, 900 Exposition Blvd., Los Angeles, CA 90007 United States of America [email protected] [email protected] [email protected] 3Marine Biodiversity and Biosecurity, NIWA, Private Bag 14901, Kilbirnie Wellington, New Zealand [email protected] 4Institute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan, Republic of China [email protected] 5Department of Biology and Monte L. Bean Life Science Museum, Brigham Young University, Provo, UT 84602 United States of America [email protected] 6Dritte Zoologische Abteilung, Naturhistorisches Museum, Wien, Austria [email protected] 7Department of Biology, University of Louisiana, Lafayette, LA 70504 United States of America [email protected] 8Department of Geology, Kent State University, Kent, OH 44242 United States of America [email protected] 9Nationaal Natuurhistorisch Museum, P. O. Box 9517, 2300 RA Leiden, The Netherlands [email protected] 10Invertebrate Zoology, Smithsonian Institution, National Museum of Natural History, 10th and Constitution Avenue, Washington, DC 20560 United States of America [email protected] 11Department of Biological Sciences, National University of Singapore, Science Drive 4, Singapore 117543 [email protected] [email protected] [email protected] 12Department of Geology, Kent State University Stark Campus, 6000 Frank Ave. -
Microbiomes of Gall-Inducing Copepod Crustaceans from the Corals Stylophora Pistillata (Scleractinia) and Gorgonia Ventalina
www.nature.com/scientificreports OPEN Microbiomes of gall-inducing copepod crustaceans from the corals Stylophora pistillata Received: 26 February 2018 Accepted: 18 July 2018 (Scleractinia) and Gorgonia Published: xx xx xxxx ventalina (Alcyonacea) Pavel V. Shelyakin1,2, Sofya K. Garushyants1,3, Mikhail A. Nikitin4, Sofya V. Mudrova5, Michael Berumen 5, Arjen G. C. L. Speksnijder6, Bert W. Hoeksema6, Diego Fontaneto7, Mikhail S. Gelfand1,3,4,8 & Viatcheslav N. Ivanenko 6,9 Corals harbor complex and diverse microbial communities that strongly impact host ftness and resistance to diseases, but these microbes themselves can be infuenced by stresses, like those caused by the presence of macroscopic symbionts. In addition to directly infuencing the host, symbionts may transmit pathogenic microbial communities. We analyzed two coral gall-forming copepod systems by using 16S rRNA gene metagenomic sequencing: (1) the sea fan Gorgonia ventalina with copepods of the genus Sphaerippe from the Caribbean and (2) the scleractinian coral Stylophora pistillata with copepods of the genus Spaniomolgus from the Saudi Arabian part of the Red Sea. We show that bacterial communities in these two systems were substantially diferent with Actinobacteria, Alphaproteobacteria, and Betaproteobacteria more prevalent in samples from Gorgonia ventalina, and Gammaproteobacteria in Stylophora pistillata. In Stylophora pistillata, normal coral microbiomes were enriched with the common coral symbiont Endozoicomonas and some unclassifed bacteria, while copepod and gall-tissue microbiomes were highly enriched with the family ME2 (Oceanospirillales) or Rhodobacteraceae. In Gorgonia ventalina, no bacterial group had signifcantly diferent prevalence in the normal coral tissues, copepods, and injured tissues. The total microbiome composition of polyps injured by copepods was diferent. -
Part I. an Annotated Checklist of Extant Brachyuran Crabs of the World
THE RAFFLES BULLETIN OF ZOOLOGY 2008 17: 1–286 Date of Publication: 31 Jan.2008 © National University of Singapore SYSTEMA BRACHYURORUM: PART I. AN ANNOTATED CHECKLIST OF EXTANT BRACHYURAN CRABS OF THE WORLD Peter K. L. Ng Raffles Museum of Biodiversity Research, Department of Biological Sciences, National University of Singapore, Kent Ridge, Singapore 119260, Republic of Singapore Email: [email protected] Danièle Guinot Muséum national d'Histoire naturelle, Département Milieux et peuplements aquatiques, 61 rue Buffon, 75005 Paris, France Email: [email protected] Peter J. F. Davie Queensland Museum, PO Box 3300, South Brisbane, Queensland, Australia Email: [email protected] ABSTRACT. – An annotated checklist of the extant brachyuran crabs of the world is presented for the first time. Over 10,500 names are treated including 6,793 valid species and subspecies (with 1,907 primary synonyms), 1,271 genera and subgenera (with 393 primary synonyms), 93 families and 38 superfamilies. Nomenclatural and taxonomic problems are reviewed in detail, and many resolved. Detailed notes and references are provided where necessary. The constitution of a large number of families and superfamilies is discussed in detail, with the positions of some taxa rearranged in an attempt to form a stable base for future taxonomic studies. This is the first time the nomenclature of any large group of decapod crustaceans has been examined in such detail. KEY WORDS. – Annotated checklist, crabs of the world, Brachyura, systematics, nomenclature. CONTENTS Preamble .................................................................................. 3 Family Cymonomidae .......................................... 32 Caveats and acknowledgements ............................................... 5 Family Phyllotymolinidae .................................... 32 Introduction .............................................................................. 6 Superfamily DROMIOIDEA ..................................... 33 The higher classification of the Brachyura ........................ -
Description of a New Genus of Cryptochiridae (Decapoda: Brachyura) Associated with Siderastrea (Anthozoa: Scleractinia), with Notes on Feeding Habits
Scientia Marina 76(3) September 2012, 517-526, Barcelona (Spain) ISSN: 0214-8358 10.3989/scimar.03538.02E Description of a new genus of Cryptochiridae (Decapoda: Brachyura) associated with Siderastrea (Anthozoa: Scleractinia), with notes on feeding habits MARCELLE F.S. BADARO 1, ELIZABETH G. NEVES 1, PETER CASTRO 2 and RODRIGO JOHNSSON 1 1 Universidade Federal da Bahia, Instituto de Biologia, Departamento de Zoologia, LABIMAR (Crustacea, Cnidaria and Fauna Associada), Adhemar de Barros, s/n, Campus de Ondina, Bahia, 40170-290 Brasil. E-mail: [email protected] 2 Biological Sciences Department, California State Polytechnic University, Pomona, 91768 CA, U.S.A. SUMMARY: Members of the Cryptochiridae are small gall-crabs that live as obligate symbionts of scleractinian corals. Only two species have so far been recorded in the western Atlantic Ocean. Herein a new Cryptochiridae genus and species is described, and new information is added on the life history of cryptochirids. The new genus is characterized by having the carapace with the lowest deflection angle among the genera, and also shows the following features: thoracic sternite 4 with setules and constriction smaller than half of the width of the basis, anterior margin curved with apical row of granules; third maxilliped with subcircular exopod reaching medially the lateral margin of the ischium; pereiopod 2 with prominent distomesial and anterolateral expansion on the merus, propodus almost twice larger than dactylus; thoracic sternite 7 with complete medial suture, female pleopod 3 uniramous with longitudinal opening. Male first pleopod straight with subdistal curvature of approximately 90°. Individuals belonging to the new genus are found in galls in massive corals although this structure is cited as being characteristic of ramified corals. -
Molecular Diversity, Phylogeny, and Biogeographic Patterns of Crustacean Copepods Associated with Scleractinian Corals of the Indo-Pacific
Molecular Diversity, Phylogeny, and Biogeographic Patterns of Crustacean Copepods Associated with Scleractinian Corals of the Indo-Pacific Dissertation by Sofya Mudrova In Partial Fulfillment of the Requirements For the Degree of Doctor of Philosophy of Science King Abdullah University of Science and Technology, Thuwal, Kingdom of Saudi Arabia November, 2018 2 EXAMINATION COMMITTEE PAGE The dissertation of Sofya Mudrova is approved by the examination committee. Committee Chairperson: Dr. Michael Lee Berumen Committee Co-Chair: Dr. Viatcheslav Ivanenko Committee Members: Dr. James Davis Reimer, Dr. Takashi Gojobori, Dr. Manuel Aranda Lastra 3 COPYRIGHT PAGE © November, 2018 Sofya Mudrova All rights reserved 4 ABSTRACT Molecular diversity, phylogeny and biogeographic patterns of crustacean copepods associated with scleractinian corals of the Indo-Pacific Sofya Mudrova Biodiversity of coral reefs is higher than in any other marine ecosystem, and significant research has focused on studying coral taxonomy, physiology, ecology, and coral-associated fauna. Yet little is known about symbiotic copepods, abundant and numerous microscopic crustaceans inhabiting almost every living coral colony. In this thesis, I investigate the genetic diversity of different groups of copepods associated with reef-building corals in distinct parts of the Indo-Pacific; determine species boundaries; and reveal patterns of biogeography, endemism, and host-specificity in these symbiotic systems. A non-destructive method of DNA extraction allowed me to use an integrated approach to conduct a diversity assessment of different groups of copepods and to determine species boundaries using molecular and taxonomical methods. Overall, for this thesis, I processed and analyzed 1850 copepod specimens, representing 269 MOTUs collected from 125 colonies of 43 species of scleractinian corals from 11 locations in the Indo-Pacific. -
Development of Coral and Zooxanthella-Specific
Development of coral and zooxanthella-specific microsatellites in three species of Pocillopora (Cnidaria, Scleractinia) from French Polynesia Hélène Magalon, Sarah Samadi, Murielle Richard, Mehdi Adjeroud, Michel Veuille To cite this version: Hélène Magalon, Sarah Samadi, Murielle Richard, Mehdi Adjeroud, Michel Veuille. Development of coral and zooxanthella-specific microsatellites in three species of Pocillopora (Cnidaria, Scleractinia) from French Polynesia. Molecular Ecology Notes, Wiley-Blackwell, 2004, 4, pp.206-8. hal-00941708 HAL Id: hal-00941708 https://hal.archives-ouvertes.fr/hal-00941708 Submitted on 6 May 2016 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Blackwell Publishing, Ltd. Development of coral and zooxanthella-specific microsatellites in three species of Pocillopora (Cnidaria, Scleractinia) from French Polynesia HÉLÈNE MAGALON,* SARAH SAMADI,*‡ MURIELLE RICHARD,* MEHDI ADJEROUD† and MICHEL VEUILLE* *Ecole Pratique des Hautes Etudes/UMR CNRS 7625, laboratoire d’Ecologie, Université Pierre et Marie Curie, 7 quai saint Bernard, 75005 Paris, France, †Ecole Pratique des Hautes Etudes, Laboratoire de Biologie Marine et Malacologie, UMR CNRS 8046, Université de Perpignan, 66860 Perpignan, France Abstract Since the building of coral reefs results from the association of corals and zooxanthellae, their intracellular algal symbionts, genetic markers for both organisms are essential for studying the contribution of their respective dispersal to the resilience of endangered reef ecosystems. -
Symbiotic Brachyura1)
CHAPTER 71-10 SYMBIOTIC BRACHYURA1) BY PETER CASTRO Contents. – Introduction – The meaning of symbiosis – Categories of symbiosis. Cryptochi- roidea: Cryptochiridae – Hosts, biogeography, and ecology – Life history – Nutrition. Pilum- noidea: Pilumnidae – Hosts, biogeography, and ecology – Life history – Nutrition. Pinnotheroidea: Aphanodactylidae and Pinnotheridae – Hosts, biogeography, and ecology – Life history – Nutri- tion. Trapezioidea: Domeciidae – Hosts, biogeography, and ecology. Trapezioidea: Tetraliidae – Hosts, biogeography, and ecology – Life history – Nutrition. Trapezioidea: Trapeziidae –Hosts, biogeography, and ecology – Life history – Nutrition. Other Brachyura – Majoidea – Portunoidea – Xanthoidea – Other Xanthoidea – Miscellaneous groups of Brachyura. Acknowledgements. Ap- pendix. Bibliography. INTRODUCTION Close heterospecific associations are ubiquitous in most if not all biotic communi- ties. These associations vary widely in character, and can include a wide range of mor- phological, ecological, physiological, and/or behavioural adaptations, at times the result of coevolution between the partners. Brachyuran crabs are common participants in such asso- ciations, e.g., as hosts for internal or external parasites (see Chapter 71-12 in this volume), in associations with other organisms for concealment (see Chapter 71-11 in this volume), and as close associates living on or within an invertebrate host (the symbiotic associations discussed in this chapter). The variety and range of complexity among these symbioses is remarkable and difficult to categorize. Brachyuran associates are often referred to as “commensals”, “parasites”, “mutualists”, or, as herein, simply as “symbionts”. The groups of symbiotic brachyurans discussed in this chapter are listed alphabetically by superfamilies, which follow the classification in Chapter 71-18 in this volume. Various 1) Manuscript concluded October 2014; final additions May 2015. © Koninklijke Brill NV, Leiden, 2015 Crustacea 9C (71-10): 543-581 544 P. -
Gall Polymorphism of Coral-Inhabiting Crabs (Decapoda, Cryptochiridae): a New Perspective
304 Journal of Marine Science and Technology, Vol. 21, Suppl., pp. 304-307 (2013) DOI: 10.6119/JMST-013-1223-7 GALL POLYMORPHISM OF CORAL-INHABITING CRABS (DECAPODA, CRYPTOCHIRIDAE): A NEW PERSPECTIVE Tsui-Ping Wei1, Hon-Cheng Chen1, Ying-Chou Lee1, Min-Li Tsai1, Jiang-Shiou Hwang2, Shao-Hung Peng3, and Yuh-Wen Chiu4 Key words: evolution, phylogeny, polymorphism, morphometry, East China Sea scleractinia, Cryptochiridae. China ABSTRACT N 24° 00’ Coral-inhabiting gall crabs are either obligate symbionts or Taiwan parasitic associates with their host corals. They form a variety of galls/pits inside the skeleton of living corals. Nine genera of gall crabs on several scleractinian corals were used to test Hung-Chung Orchid Island N 22° 00’ the hypothesis that galls vary among cryptochirid genera. Peninsula Phylogenetic and morphometric observations were combined to analyze the possible evolutionary significance of gall con- South China Sea struction. A high degree of conservation of gall shapes was observed in relation to the gall crabs’ phylogeny. Gall/pit E 120° 00’ E 122° 00’ morphology and fidelity was studied in each of the different species of gall crabs. In addition, the correlation analysis results showed a significant linear relationship between crab size (carapace width) and its gall/pit size (opening diameter of gall/pit) (p < 0.001), demonstrating that crabs have the ability Orchid Island to create the gall/pit size which suits to their own size. Phy- logenetically related crab species exhibit similar gall shapes; thus, the galls/pit morphology can be considered as an exten- tion of the crabs’ phenotypes. -
Evolutionary Transformations of the Reproductive System in Eubrachyura (Crustacea: Decapoda)
EVOLUTIONARY TRANSFORMATIONS OF THE REPRODUCTIVE SYSTEM IN EUBRACHYURA (CRUSTACEA: DECAPODA) DISSERTATION zur Erlangung des akademischen Grades Doctor rerum naturalium (Dr. rer. nat.) eingereicht an der Lebenswissenschaftlichen Fakultät der Humboldt-Universität zu Berlin von M. Sc. Katja, Kienbaum, geb. Jaszkowiak Präsidentin der Humboldt-Universität zu Berlin Prof. Dr.-Ing. Dr. Sabine Kunst Dekan der Lebenswissenschaftlichen Fakultät der Humboldt-Universität zu Berlin Prof. Dr. Bernhard Grimm Gutachter 1. Prof. Dr. Gerhard Scholtz 2. PD Dr. Thomas Stach 3. PD Dr. Christian Wirkner Tag der mündlichen Prüfung: 03.05.2019 CONTENT C ONTENT A BSTRACT v i - vii Z USAMMENFASSUNG viii - x 1 | INTRODUCTION 1 - 11 1.1 | THE BRACHYURA 1 1.1.1 | OBJECT OF INVESTIGATION 1 - 5 1.1.2 | WHAT WE (DO NOT) KNOW ABOUT THE PHYLOGENY OF EUBRACHURA 6 - 10 1. 2 |MS AI 10 - 11 2 | THE MORPHOLOGY OF THE MALE AND FEMALE REPRODUCTIVE SYSTEM IN TWO 12 - 34 SPECIES OF SPIDER CRABS (DECAPODA: BRACHYURA: MAJOIDEA) AND THE ISSUE OF THE VELUM IN MAJOID REPRODUCTION. 2.1 | INTRODUCTION 13 - 14 2.2 | MATERIAL AND METHODS 14 - 16 2.3 | RESULTS 16 - 23 2.4 | DISCUSSION 24 - 34 3 | THE MORPHOLOGY OF THE REPRODUCTIVE SYSTEM IN THE CRAB 35 - 51 PERCNON GIBBESI (DECAPODA: BRACHYURA: GRAPSOIDEA) REVEALS A NEW COMBINATION OF CHARACTERS. 3.1 | INTRODUCTION 36 - 37 3.2 | MATERIAL AND METHODS 37 - 38 3.3 | RESULTS 39 - 46 3.4 | DISCUSSION 46 - 51 4 | THE REPRODUCTIVE SYSTEM OF LIMNOPILOS NAIYANETRI INDICATES A 52 - 64 THORACOTREME AFFILIATION OF HYMENOSOMATIDAE (DECAPODA, EUBRACHYURA). -
Diversification and Distribution of Gall Crabs (Brachyura: Cryptochiridae
University of Groningen Diversification and distribution of gall crabs (Brachyura: Cryptochiridae: Opecarcinus) associated with Agariciidae corals Xu, Tao; Bravo, Henrique; Paulay, Gustav; van der Meij, S E T Published in: Coral Reefs DOI: 10.1007/s00338-021-02163-1 https://doi.org/10.1007/s00338-021-02163-1 IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below. Document Version Version created as part of publication process; publisher's layout; not normally made publicly available Publication date: 2021 Link to publication in University of Groningen/UMCG research database Citation for published version (APA): Xu, T., Bravo, H., Paulay, G., & van der Meij, S. E. T. (2021). Diversification and distribution of gall crabs (Brachyura: Cryptochiridae: Opecarcinus) associated with Agariciidae corals. Coral Reefs. https://doi.org/10.1007/s00338-021-02163-1, https://doi.org/10.1007/s00338-021-02163-1 Copyright Other than for strictly personal use, it is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), unless the work is under an open content license (like Creative Commons). The publication may also be distributed here under the terms of Article 25fa of the Dutch Copyright Act, indicated by the “Taverne” license. More information can be found on the University of Groningen website: https://www.rug.nl/library/open-access/self-archiving-pure/taverne- amendment. Take-down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. -
Occurrence Patterns of Coral-Dwelling Gall Crabs (Cryptochiridae) Over Depth Intervals in the Caribbean Van Tienderen, Kaj M.; Van Der Meij, S E T
University of Groningen Occurrence patterns of coral-dwelling gall crabs (Cryptochiridae) over depth intervals in the Caribbean van Tienderen, Kaj M.; van der Meij, S E T Published in: PeerJ DOI: 10.7717/peerj.1794 IMPORTANT NOTE: You are advised to consult the publisher's version (publisher's PDF) if you wish to cite from it. Please check the document version below. Document Version Publisher's PDF, also known as Version of record Publication date: 2016 Link to publication in University of Groningen/UMCG research database Citation for published version (APA): van Tienderen, K. M., & van der Meij, S. E. T. (2016). Occurrence patterns of coral-dwelling gall crabs (Cryptochiridae) over depth intervals in the Caribbean. PeerJ, 4, [1794]. DOI: 10.7717/peerj.1794 Copyright Other than for strictly personal use, it is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), unless the work is under an open content license (like Creative Commons). Take-down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Downloaded from the University of Groningen/UMCG research database (Pure): http://www.rug.nl/research/portal. For technical reasons the number of authors shown on this cover page is limited to 10 maximum. Download date: 06-12-2018 Occurrence patterns of coral-dwelling gall crabs (Cryptochiridae) over depth intervals in the Caribbean Kaj M. van Tienderen1 and Sancia E.T. -
(Crustacea: Cryptochiridae)! Occurring in the Pacific Ocean
PacificScience(1990), vol. 44, no. 4: 417-448 © 1990 by University of Hawaii Press. All rights reserved Revision of the Genera of Gall Crabs (Crustacea: Cryptochiridae)! Occurring in the Pacific Ocean Roy K. KROPP2 ABSTRACT: The coral gall crabs, Family Cryptochiridae, occurring in the Pacific Ocean are reviewed. Fifteen genera, including four new genera, are recognized: Cryptochirus Heller; Dacryomaia, new genus; Fizesereneia Takeda & Tamura; Fungicola Serene; Hapalocarcinus Stimpson; Hiroia Takeda & Tamura; Lithoscaptus Milne Edwards; Neotroglocarcinus Takeda & Tamura; Opecarcinus Kropp & Manning; Pelycomaia, new genus; Pseudocryptochirus Hiro; Pseudohapalocarcinus Fize & Serene; Sphenomaia, new genus; Utinomiella Kropp & Takeda; and Xynomaia, new genus. Host, depth, and distribution records are given for each genus. A key to the females of all gall crab genera is included. THE CORAL GALL CRABS, Family Crypto ramous or biramous) of the second pleopod chiridae, are obligate associates of living of the female and the host coral taxon on scleractinian corals. Not only do they reside which the crab species occurred. McCain and in galls, tunnels, or pits in the coral skeleton, Coles (1979) found the second pleopod to be but they also feed on the host coral mucus and uniramous on one side of the abdomen of an tissues (Kropp 1986). Though the family has individual, biramous on the other, and vari been known for 130 yr, its taxonomy has been able among individuals of Utinomiella dimor marred by many errors. These errors have pha (Henderson 1906). I have made similar resulted from failures to consider type mate observations for this and other species among rial or available literature, use of inappro my collections from Micronesia.