Diptera : Culicidae
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Mosquito Species Identification Using Convolutional Neural Networks With
www.nature.com/scientificreports OPEN Mosquito species identifcation using convolutional neural networks with a multitiered ensemble model for novel species detection Adam Goodwin1,2*, Sanket Padmanabhan1,2, Sanchit Hira2,3, Margaret Glancey1,2, Monet Slinowsky2, Rakhil Immidisetti2,3, Laura Scavo2, Jewell Brey2, Bala Murali Manoghar Sai Sudhakar1, Tristan Ford1,2, Collyn Heier2, Yvonne‑Marie Linton4,5,6, David B. Pecor4,5,6, Laura Caicedo‑Quiroga4,5,6 & Soumyadipta Acharya2* With over 3500 mosquito species described, accurate species identifcation of the few implicated in disease transmission is critical to mosquito borne disease mitigation. Yet this task is hindered by limited global taxonomic expertise and specimen damage consistent across common capture methods. Convolutional neural networks (CNNs) are promising with limited sets of species, but image database requirements restrict practical implementation. Using an image database of 2696 specimens from 67 mosquito species, we address the practical open‑set problem with a detection algorithm for novel species. Closed‑set classifcation of 16 known species achieved 97.04 ± 0.87% accuracy independently, and 89.07 ± 5.58% when cascaded with novelty detection. Closed‑set classifcation of 39 species produces a macro F1‑score of 86.07 ± 1.81%. This demonstrates an accurate, scalable, and practical computer vision solution to identify wild‑caught mosquitoes for implementation in biosurveillance and targeted vector control programs, without the need for extensive image database development for each new target region. Mosquitoes are one of the deadliest animals in the world, infecting between 250–500 million people every year with a wide range of fatal or debilitating diseases, including malaria, dengue, chikungunya, Zika and West Nile Virus1. -
Data-Driven Identification of Potential Zika Virus Vectors Michelle V Evans1,2*, Tad a Dallas1,3, Barbara a Han4, Courtney C Murdock1,2,5,6,7,8, John M Drake1,2,8
RESEARCH ARTICLE Data-driven identification of potential Zika virus vectors Michelle V Evans1,2*, Tad A Dallas1,3, Barbara A Han4, Courtney C Murdock1,2,5,6,7,8, John M Drake1,2,8 1Odum School of Ecology, University of Georgia, Athens, United States; 2Center for the Ecology of Infectious Diseases, University of Georgia, Athens, United States; 3Department of Environmental Science and Policy, University of California-Davis, Davis, United States; 4Cary Institute of Ecosystem Studies, Millbrook, United States; 5Department of Infectious Disease, University of Georgia, Athens, United States; 6Center for Tropical Emerging Global Diseases, University of Georgia, Athens, United States; 7Center for Vaccines and Immunology, University of Georgia, Athens, United States; 8River Basin Center, University of Georgia, Athens, United States Abstract Zika is an emerging virus whose rapid spread is of great public health concern. Knowledge about transmission remains incomplete, especially concerning potential transmission in geographic areas in which it has not yet been introduced. To identify unknown vectors of Zika, we developed a data-driven model linking vector species and the Zika virus via vector-virus trait combinations that confer a propensity toward associations in an ecological network connecting flaviviruses and their mosquito vectors. Our model predicts that thirty-five species may be able to transmit the virus, seven of which are found in the continental United States, including Culex quinquefasciatus and Cx. pipiens. We suggest that empirical studies prioritize these species to confirm predictions of vector competence, enabling the correct identification of populations at risk for transmission within the United States. *For correspondence: mvevans@ DOI: 10.7554/eLife.22053.001 uga.edu Competing interests: The authors declare that no competing interests exist. -
MOSQUITOES of the SOUTHEASTERN UNITED STATES
L f ^-l R A R > ^l^ ■'■mx^ • DEC2 2 59SO , A Handbook of tnV MOSQUITOES of the SOUTHEASTERN UNITED STATES W. V. King G. H. Bradley Carroll N. Smith and W. C. MeDuffle Agriculture Handbook No. 173 Agricultural Research Service UNITED STATES DEPARTMENT OF AGRICULTURE \ I PRECAUTIONS WITH INSECTICIDES All insecticides are potentially hazardous to fish or other aqpiatic organisms, wildlife, domestic ani- mals, and man. The dosages needed for mosquito control are generally lower than for most other insect control, but caution should be exercised in their application. Do not apply amounts in excess of the dosage recommended for each specific use. In applying even small amounts of oil-insecticide sprays to water, consider that wind and wave action may shift the film with consequent damage to aquatic life at another location. Heavy applications of insec- ticides to ground areas such as in pretreatment situa- tions, may cause harm to fish and wildlife in streams, ponds, and lakes during runoff due to heavy rains. Avoid contamination of pastures and livestock with insecticides in order to prevent residues in meat and milk. Operators should avoid repeated or prolonged contact of insecticides with the skin. Insecticide con- centrates may be particularly hazardous. Wash off any insecticide spilled on the skin using soap and water. If any is spilled on clothing, change imme- diately. Store insecticides in a safe place out of reach of children or animals. Dispose of empty insecticide containers. Always read and observe instructions and precautions given on the label of the product. UNITED STATES DEPARTMENT OF AGRICULTURE Agriculture Handbook No. -
And Haemagogus Mosquitoes in Southern Brazil (Diptera: Culicidae)*
BITING ACTIVITY OF AEDES SCAPULARIS (RONDANI) AND HAEMAGOGUS MOSQUITOES IN SOUTHERN BRAZIL (DIPTERA: CULICIDAE)* Oswaldo Paulo Forattini** Almério de Castro Gomes** FORATTINI, O. P. & GOMES, A. de C. Biting activity of Aedes scapularis (Rondani) and Haemagogus mosquitoes in Southern Brazil (Diptera: Culicidae). Rev. Saúde públ., S. Paulo, 22:84-93, 1988. ABSTRACT: The biting activity of a population of Aedes scapularis (Rondani), Hae- magogus capricornii Lutz and Hg. leucocelaenus (Dyar and Shannon) in Southern Brazil was studied between March 1980 and April 1983. Data were obtained with 25-hour human bait catches in three areas with patchy residual forests, named "Jacaré-Pepira", "Lupo" Farm, and "Sta. Helena" Farm, in the highland region of S. Paulo State (Brazil). Data obtained on Ae. scapularis were compared with those formerly gathered in the "Ribeira'' Valley lowlands, and were similar, except in the "Lupo" Farm study area, where a pre- crepuscular peak was observed, not recorded at the "Jacaré-Pepira" site or in the "Ribeira" Valley. In all the areas this mosquito showed diurnal and nocturnal activity, but was most active during the evening crepuscular period. These observations support the hypo- thesis about the successful adaptation of Ae. scapularis to man-made environments and have epidemiological implications that arise from it. As for Haemagogus, results obtained on the "Lupo" and "Sta. Helena" regions agree with previous data obtained in several other regions and show its diurnal activity. The proximity of "Lupo" Farm, where Hg. capricornii and Hg. leucocelaenus showed considerable activity, to "Araraquara" city where Aedes aegypti was recently found, raises some epidemiological considerations about the possibility of urban yellow fever resurgence. -
Possible Non-Sylvatic Transmission of Yellow Fever Between Non-Human Primates in São Paulo City, Brazil, 2017–2018
www.nature.com/scientificreports OPEN Possible non‑sylvatic transmission of yellow fever between non‑human primates in São Paulo city, Brazil, 2017–2018 Mariana Sequetin Cunha1*, Rosa Maria Tubaki2, Regiane Maria Tironi de Menezes2, Mariza Pereira3, Giovana Santos Caleiro1,4, Esmenia Coelho3, Leila del Castillo Saad5, Natalia Coelho Couto de Azevedo Fernandes6, Juliana Mariotti Guerra6, Juliana Silva Nogueira1, Juliana Laurito Summa7, Amanda Aparecida Cardoso Coimbra7, Ticiana Zwarg7, Steven S. Witkin4,8, Luís Filipe Mucci3, Maria do Carmo Sampaio Tavares Timenetsky9, Ester Cerdeira Sabino4 & Juliana Telles de Deus3 Yellow Fever (YF) is a severe disease caused by Yellow Fever Virus (YFV), endemic in some parts of Africa and America. In Brazil, YFV is maintained by a sylvatic transmission cycle involving non‑human primates (NHP) and forest canopy‑dwelling mosquitoes, mainly Haemagogus‑spp and Sabethes-spp. Beginning in 2016, Brazil faced one of the largest Yellow Fever (YF) outbreaks in recent decades, mainly in the southeastern region. In São Paulo city, YFV was detected in October 2017 in Aloutta monkeys in an Atlantic Forest area. From 542 NHP, a total of 162 NHP were YFV positive by RT-qPCR and/or immunohistochemistry, being 22 Callithrix-spp. most from urban areas. Entomological collections executed did not detect the presence of strictly sylvatic mosquitoes. Three mosquito pools were positive for YFV, 2 Haemagogus leucocelaenus, and 1 Aedes scapularis. In summary, YFV in the São Paulo urban area was detected mainly in resident marmosets, and synanthropic mosquitoes were likely involved in viral transmission. Yellow Fever virus (YFV) is an arbovirus member of the Flavivirus genus, family Flaviviridae and the causative agent of yellow fever (YF)1. -
Butterflies of North America
Insects of Western North America 7. Survey of Selected Arthropod Taxa of Fort Sill, Comanche County, Oklahoma. 4. Hexapoda: Selected Coleoptera and Diptera with cumulative list of Arthropoda and additional taxa Contributions of the C.P. Gillette Museum of Arthropod Diversity Colorado State University, Fort Collins, CO 80523-1177 2 Insects of Western North America. 7. Survey of Selected Arthropod Taxa of Fort Sill, Comanche County, Oklahoma. 4. Hexapoda: Selected Coleoptera and Diptera with cumulative list of Arthropoda and additional taxa by Boris C. Kondratieff, Luke Myers, and Whitney S. Cranshaw C.P. Gillette Museum of Arthropod Diversity Department of Bioagricultural Sciences and Pest Management Colorado State University, Fort Collins, Colorado 80523 August 22, 2011 Contributions of the C.P. Gillette Museum of Arthropod Diversity. Department of Bioagricultural Sciences and Pest Management Colorado State University, Fort Collins, CO 80523-1177 3 Cover Photo Credits: Whitney S. Cranshaw. Females of the blow fly Cochliomyia macellaria (Fab.) laying eggs on an animal carcass on Fort Sill, Oklahoma. ISBN 1084-8819 This publication and others in the series may be ordered from the C.P. Gillette Museum of Arthropod Diversity, Department of Bioagricultural Sciences and Pest Management, Colorado State University, Fort Collins, Colorado, 80523-1177. Copyrighted 2011 4 Contents EXECUTIVE SUMMARY .............................................................................................................7 SUMMARY AND MANAGEMENT CONSIDERATIONS -
Forest Health Technology Enterprise Team Biological Control of Invasive
Forest Health Technology Enterprise Team TECHNOLOGY TRANSFER Biological Control Biological Control of Invasive Plants in the Eastern United States Roy Van Driesche Bernd Blossey Mark Hoddle Suzanne Lyon Richard Reardon Forest Health Technology Enterprise Team—Morgantown, West Virginia United States Forest FHTET-2002-04 Department of Service August 2002 Agriculture BIOLOGICAL CONTROL OF INVASIVE PLANTS IN THE EASTERN UNITED STATES BIOLOGICAL CONTROL OF INVASIVE PLANTS IN THE EASTERN UNITED STATES Technical Coordinators Roy Van Driesche and Suzanne Lyon Department of Entomology, University of Massachusets, Amherst, MA Bernd Blossey Department of Natural Resources, Cornell University, Ithaca, NY Mark Hoddle Department of Entomology, University of California, Riverside, CA Richard Reardon Forest Health Technology Enterprise Team, USDA, Forest Service, Morgantown, WV USDA Forest Service Publication FHTET-2002-04 ACKNOWLEDGMENTS We thank the authors of the individual chap- We would also like to thank the U.S. Depart- ters for their expertise in reviewing and summariz- ment of Agriculture–Forest Service, Forest Health ing the literature and providing current information Technology Enterprise Team, Morgantown, West on biological control of the major invasive plants in Virginia, for providing funding for the preparation the Eastern United States. and printing of this publication. G. Keith Douce, David Moorhead, and Charles Additional copies of this publication can be or- Bargeron of the Bugwood Network, University of dered from the Bulletin Distribution Center, Uni- Georgia (Tifton, Ga.), managed and digitized the pho- versity of Massachusetts, Amherst, MA 01003, (413) tographs and illustrations used in this publication and 545-2717; or Mark Hoddle, Department of Entomol- produced the CD-ROM accompanying this book. -
Diversity and Ecology of Host-Seeking Mosquitoes in Irrigated Agro-Ecosystems of Clay County, Nebraska Alister K
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Dissertations and Student Research in Entomology Entomology, Department of 5-2014 Diversity and ecology of host-seeking mosquitoes in irrigated agro-ecosystems of Clay County, Nebraska Alister K. Bryson University of Nebraska-Lincoln Follow this and additional works at: http://digitalcommons.unl.edu/entomologydiss Part of the Biodiversity Commons, Entomology Commons, and the Terrestrial and Aquatic Ecology Commons Bryson, Alister K., "Diversity and ecology of host-seeking mosquitoes in irrigated agro-ecosystems of Clay County, Nebraska" (2014). Dissertations and Student Research in Entomology. 31. http://digitalcommons.unl.edu/entomologydiss/31 This Article is brought to you for free and open access by the Entomology, Department of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Dissertations and Student Research in Entomology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. DIVERSITY AND ECOLOGY OF HOST-SEEKING MOSQUITOES IN IRRIGATED AGRO-ECOSYSTEMS OF CLAY COUNTY, NEBRASKA By Alister Kinoshita Bryson A THESIS Presented to the Faculty of The Graduate College at the University of Nebraska In Partial Fulfillment of Requirements For the Degree of Master of Science Major: Entomology Under the Supervision of Professor M. Roberto Cortiñas Lincoln, Nebraska May, 2014 DIVERSITY AND ECOLOGY OF HOST-SEEKING MOSQUITOES IN IRRIGATED AGRO-ECOSYSTEMS IN CLAY COUNTY, NEBRASKA Alister Kinoshita Bryson, M.S. University of Nebraska, 2014 Advisor: Roberto Cortiñas In the United States, Nebraska has the third highest incidence of human West Nile virus (WNV). Since WNV was first detected in the state in 2002, 3,422 confirmed cases and 57 deaths have been reported. -
P2699 Identification Guide to Adult Mosquitoes in Mississippi
Identification Guide to Adult Mosquitoes in Mississippi es Identification Guide to Adult Mosquitoes in Mississippi By Wendy C. Varnado, Jerome Goddard, and Bruce Harrison Cover photo by Dr. Blake Layton, Mississippi State University Extension Service. Preface Entomology, and Plant Pathology at Mississippi State University, provided helpful comments and Mosquitoes and the diseases they transmit are in- other supportIdentification for publication and ofGeographical this book. Most Distri- creasing in frequency and geographic distribution. butionfigures of used the inMosquitoes this book of are North from America, Darsie, R. North F. and As many as 1,000 people were exposed recently ofWard, Mexico R. A., to dengue fever during an outbreak in the Florida Mos- Keys. “New” mosquito-borne diseases such as quitoes of, NorthUniversity America Press of Florida, Gainesville, West Nile and Chikungunya have increased pub- FL, 2005, and Carpenter, S. and LaCasse, W., lic awareness about disease potential from these , University of California notorious pests. Press, Berkeley, CA, 1955. None of these figures are This book was written to provide citizens, protected under current copyrights. public health workers, school teachers, and other Introduction interested parties with a hands-on, user-friendly guide to Mississippi mosquitoes. The book’s util- and Background ity may vary with each user group, and that’s OK; some will want or need more detail than others. Nonetheless, the information provided will allow There has never been a systematic, statewide you to identify mosquitoes found in Mississippi study of mosquitoes in Mississippi. Various au- with a fair degree of accuracy. For more informa- thors have reported mosquito collection records tion about mosquito species occurring in the state as a result of surveys of military installations in and diseases they may transmit, contact the ento- the state and/or public health malaria inspec- mology staff at the Mississippi State Department of tions. -
American En Tomoiogica/ Institute
Contributions of the American En tomoIogica/ Institute Volume 13, Number 3, 1976 MOSQUITO STUDIES (Diptera, Culicidae) XXXIII. A REVISION OF THE SCAPULARIS GROUP 0~ AEDES (OCHLEROTATUS) By J. Hal Arnell MOSQUITO STUDIES (Diptera, Culicidae) XxX111. A REVISION OF THE SCAPULARIS GROUP OF AEDES (OCHLEROTATUS)’ BY J. Hal Arnell* CONTENTS INTRODUCTION 2 MATERIAL AND ME+Hobs : : : : : : : : : : : : : : : : : : : 3 SYSTEMATICS ......................... 4 Taxonomic History ....................... 4 Taxonomic Characters, ..................... 4 Proposed Classification ..................... 6 Distribution .......................... 6 Affinities ..... 6 MEDICAL IMPORTAN& : : : : : : : : : : : : : : : : : : : : : 7 TAXONOMIC TREATMENT .................... 9 Scapular-is Group ........................ 9 Keys to Subgroups and Species ................. 15 Incomptus Subgroup ...................... 20 1. Aedes (0.) incomptus ................... 20 Bogotanus Subgroup ...................... 22 2. Aedes (0. ) bogotanus ................... 22 3. Aedes (0.) deficiens ................... 24 Trivittatus Subgroup ...................... 25 4. Aedes (0.) atactavittatus. ................. 26 5. Aedes (0.) meprai .................... 28 6. Aedes (0.) angustivittatus ................. 29 7. Aedes (0.) trivittatus ................... 35 Tortilis Subgroup ....................... 38 8. Aedes (0.) tortilis .................... 39 9. Aedes (0. ) auratus .................... 44 ‘Contribution from project “Mosquitoes of Middle America” supported by U.S. Public Health Service -
Mosquitoes of the Caribbean
Vector Hazard Report: Mosquitoes of the Caribbean 1 Table of Contents Reference Map Vector Ecology Month of Maximum Precipitation Month of Maximum Temperature Monthly Climate Maps Human Density Soil Drainage Mosquito-Borne Disease Hazards of the Caribbean Aedes Arboviruses Yellow Fever Dengue Fever Zika Virus Malaria Infectious Days Temperature Suitability Incidence Estimate/ Entomological Inoculation Rate Mosquitoes of Medical Importance Aedes (Stg.) aegypti (Linnaeus, 1762) Species Information/ Habitat Suitability Model Aedes (Stg.) albopictus (Skuse, 1894) Species Information/ Habitat Suitability Model Aedes (Och.) scapularis (Rondani, 1848) Species Information/ Habitat Suitability Model Aedes (Och.) taeniorhynchus (Wiedemann, 1821) Species Information/ Habitat Suitability Model Aedes (Gym.) mediovittatus (Coquillett, 1906) Species Information Anopheles (Nys.) albimanus Wiedemann, 1820 Species Information/ Habitat Suitability Model Anopheles (Nys.) aquasalis Curry, 1932 Species Information/ Habitat Suitability Model Anopheles (Ano.) quadrimaculatus Say, 1824 Species Information/ Habitat Suitability Model Anopheles (Nys.) argyritarsis Robineau-Desvoidy, 1827 Species Information/ Habitat Suitability Model Anopheles (Ano.) crucians Wiedemann, 1828 Species Information/ Habitat Suitability Model Culex (Cux.) nigripalpus Theobald, 1901 Species Information/ Habitat Suitability Model Culex (Cux.) quinquefasciatus Say, 1823 Species Information/ Habitat Suitability Model Culex (Mel.) erraticus (Dyar and Knab, 1906) Species Information Culex (Mel.) -
УТИЦАЈ УСЛОВА МАСОВНОГ УЗГОЈА НА СЕЛЕКЦИЈУ ДУЖИНЕ КРИЛА КОМАРАЦА ВРСТЕ Stegomyia Albopicta (Diptera: Culicidae) И ЕФЕКТИ МЕТОДЕ ОТПУШТАЊА СТЕРИЛНИХ МУЖЈАКА
УНИВЕРЗИТЕТ У НОВОМ САДУ ПОЉОПРИВРЕДНИ ФАКУЛТЕТ Департман за Фитомедицину и заштиту животне средине УТИЦАЈ УСЛОВА МАСОВНОГ УЗГОЈА НА СЕЛЕКЦИЈУ ДУЖИНЕ КРИЛА КОМАРАЦА ВРСТЕ Stegomyia albopicta (Diptera: Culicidae) И ЕФЕКТИ МЕТОДЕ ОТПУШТАЊА СТЕРИЛНИХ МУЖЈАКА ДОКТОРСКА ДИСЕРТАЦИЈА Ментори: Кандидат: Проф. др Душан Петрић M.Sc. Дубравка Пудар Проф. др Romeo Bellini Нови Сад, 2018. УНИВЕРЗИТЕТ У НОВОМ САДУ ПОЉОПРИВРЕДНИ ФАКУЛТЕТ КЉУЧНА ДОКУМЕНТАЦИЈСКА ИНФОРМАЦИЈА Редни број: РБР Идентификациони број: ИБР Тип документације: Монографска документација ТД Тип записа: Текстуални штампани материјал ТЗ Врста рада (дипл., маг., докт.): Докторска дисертација ВР Име и презиме аутора: M.Sc. Дубравка Пудар АУ Ментор (титула, име, презиме, др Душан Петрић, редовни професор звање): др Romeo Bellini, редовни професор МН Наслов рада: Утицај услова масовног узгоја на селекцију дужине НР крила комараца врсте Stegomyia albopicta (Diptera: Culicidae) и ефекти методе отпуштања стерилних мужјака Језик публикације: српски ЈП Језик извода: срп. / енг. ЈИ Земља публиковања: Република Србија ЗП Уже географско подручје: АП Војводина УГП Година: 2018 ГО Издавач: ауторски репринт ИЗ Место и адреса: 21000 Нови Сад, Трг Доситеја Обрадовића 8 МА Физички опис рада: 8 поглавља / 207 страница / 138 слика / 9 графикона / ФО 20 табела / 323 референцe / биографија и захвалница Научна област: Биотехничке науке НО Научна дисциплина: Ентомологија НД Предметна одредница, кључне Техника стерилизације инсеката, Aedes albopictus речи: [Stegomyia albopicta] ПО УДК 597.771:533.693(043.3) Чува се: Библиотека Пољопривредног факултета, ЧУ Универзитета у Новом Саду Важна напомена: нема ВН Извод: ИЗ Aedes albopictus [Stegomyia albopicta] (Skuse 1895) (Diptera: Culicidae) је тренутно најекспанзивнија инванзивна врста комараца на свету. Ова врста је од изузетног медицинског значаја, пошто су женке вектори преко 20 арбовируса (проузроковача денге, чикунгуња грознице, различитих енцефалитиса и др.) и нематода рода Dirofilaria.