Onagraceae) in Paraíba State, Northeastern Brazil
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Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution
Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution by William Allen Freyman A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Integrative Biology and the Designated Emphasis in Computational and Genomic Biology in the Graduate Division of the University of California, Berkeley Committee in charge: Dr. Bruce G. Baldwin, Chair Dr. John P. Huelsenbeck Dr. Brent D. Mishler Dr. Kipling W. Will Fall 2017 Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution Copyright 2017 by William Allen Freyman Abstract Phylogenetic Models Linking Speciation and Extinction to Chromosome and Mating System Evolution by William Allen Freyman Doctor of Philosophy in Integrative Biology and the Designated Emphasis in Computational and Genomic Biology University of California, Berkeley Dr. Bruce G. Baldwin, Chair Key evolutionary transitions have shaped the tree of life by driving the processes of spe- ciation and extinction. This dissertation aims to advance statistical and computational ap- proaches that model the timing and nature of these transitions over evolutionary trees. These methodological developments in phylogenetic comparative biology enable formal, model- based, statistical examinations of the macroevolutionary consequences of trait evolution. Chapter 1 presents computational tools for data mining the large-scale molecular sequence datasets needed for comparative phylogenetic analyses. I describe a novel metric, the miss- ing sequence decisiveness score (MSDS), which assesses the phylogenetic decisiveness of a matrix given the pattern of missing sequence data. In Chapter 2, I introduce a class of phylogenetic models of chromosome number evolution that accommodate both anagenetic and cladogenetic change. -
Phytochemical and Antimicrobial Studies of Ludwigia Hyssopifolia (G.Don) Exell Thet Su Hlaing1 Abstract Ludwigia Hyssopifolia (G.Don) Exell
2nd Myanmar Korea Conference Research Journal 433 Phytochemical and Antimicrobial Studies of Ludwigia hyssopifolia (G.Don) Exell Thet Su Hlaing1 Abstract Ludwigia hyssopifolia (G.Don) Exell. is annual herb belongs to the family Onagraceae in the order Myrtales. It is locally known as Taw-lay-hnyin. This plant was collected from Hinthada University Campus, Hinthada Township, Ayeyarwaddy Region. The morphological characters of vegetative and reproductive parts of the fresh specimens were investigated with the help of available literatures. The preliminary phytochemical tests were conducted from the powdered sample of the whole plant. The presence of alkaloid, phenolic compound, flavonoid, terpenoid, starch, reducing sugar, glycoside, saponin, tannin, α-amino acid and carbohydrate were found in the examination. Elemental analysis of powdered sample was examined by using EDXRF spectrometer. Percentage of calcium was higher than the other elements.Antimicrobial activities of various crude extracts were carried out by using paper disc diffusion assay with four test organisms. The methanolic extracts exhibited the highest against on different pathogenic microorganisms. These results showed that Ludwigia hyssopifolia (G.Don) Exell is endowed with many active constituents, minerals and antimicrobial properties that can be found useful in medicinal activities as well as possible application in nutrition and pharmacology. Key words : Ludwigia hyssopifolia (G.Don) Exell, phytochemical tests, antimicrobial activity Introduction Ludwigia hyssopifolia (G.Don) Exell. is commonly known as Taw-lay-hnyin in Myanmar and water primrose in English name. It is one of the traditionally used medicinal plants in Myanmar. It is distributed all over the world, particularly in both temperate and tropical regions of the world (Valkenburg, 2002). -
Universidade Federal Do Recôncavo Da Bahia Centro De Ciências Agrárias, Ambientais E Biológicas
UNIVERSIDADE FEDERAL DO RECÔNCAVO DA BAHIA CENTRO DE CIÊNCIAS AGRÁRIAS, AMBIENTAIS E BIOLÓGICAS CARACTERES IMPORTANTES NA IDENTIFICAÇÃO DE ESPÉCIES DE LUDWIGIA L. (ONAGRACEAE) OCORRENTES NO RECÔNCAVO DA BAHIA, BRASIL NELMA XAVIER MARQUES DE SOUSA Bacharel em Biologia CRUZ DAS ALMAS BAHIA – BRASIL 2017 NELMA XAVIER MARQUES DE SOUSA CARACTERES IMPORTANTES NA IDENTIFICAÇÃO DE ESPÉCIES DE LUDWIGIA L. (ONAGRACEAE) OCORRENTES NO RECÔNCAVO DA BAHIA, BRASIL Trabalho de Conclusão de Curso apresentado à Universidade Federal do Recôncavo da Bahia, como parte das exigências do Curso de Graduação de Bacharelado em Biologia, para obtenção do título de Bacharel em Biologia. CRUZ DAS ALMAS BAHIA - BRASIL 2017 NELMA XAVIER MARQUES DE SOUSA CARACTERES IMPORTANTES NA IDENTIFICAÇÃO DE ESPÉCIES DE LUDWIGIA L. (ONAGRACEAE) OCORRENTES NO RECÔNCAVO DA BAHIA, BRASIL Trabalho de Conclusão de Curso apresentado à Universidade Federal do Recôncavo da Bahia, como parte das exigências do Curso de Graduação de Bacharelado em Biologia, para obtenção do título de Bacharel em Biologia. APROVADA: 03 de Fevereiro de 2017 I Dedicatória Aos meus pais (in memoriam), pela sabedoria de ter colocado a educação em primeiro lugar. “O mundo está nas mãos daqueles que têm a coragem de sonhar e de correr o risco de viver seus sonhos.” Paulo Coelho. II AGRADECIMENTOS Minha gratidão a professora Dra. Lidyanne Aona, por ser uma excelente professora e orientadora. Obrigada pelo suporte, por sempre estar presente, contribuindo muito com minha aprendizagem e ajudando-me em todos os trabalhos, pelo carinho que sempre teve comigo e, principalmente, pela paciência. A professora Dra. Ana Odete Vieira pelos ensinamentos, cooperação e importante contribuição. -
Vestured Pits in Wood of Onagraceae: Correlations with Ecology, Habit, and Phylogeny1
VESTURED PITS IN WOOD OF Sherwin Carlquist2 and Peter H. Raven3 ONAGRACEAE: CORRELATIONS WITH ECOLOGY, HABIT, AND PHYLOGENY1 ABSTRACT All Onagraceae for which data are available have vestured pits on vessel-to-vessel pit pairs. Vestures may also be present in some species on the vessel side of vessel-to-ray pit pairs. Herbaceous Onagraceae do not have fewer vestures, although woods with lower density (Circaea L. and Oenothera L.) have fewer vestures. Some Onagraceae from drier areas tend to have smaller vessel pits, and on that account may have fewer vestures (Epilobium L. and Megacorax S. Gonz´alez & W. L. Wagner). Pit apertures as seen on the lumen side of vessel walls are elliptical, occasionally oval, throughout the family. Vestures are predominantly attached to pit aperture margins. As seen from the outer surfaces of vessels, vestures may extend across the pit cavities. Vestures are usually absent or smaller on the distal portions of pit borders (except for Ludwigia L., which grows consistently in wet areas). Distinctive vesture patterns were observed in the several species of Lopezia Cav. and in Xylonagra Donn. Sm. & Rose. Vestures spread onto the lumen-facing vessel walls of Ludwigia octovalvis (Jacq.) P. H. Raven. Although the genera are presented here in the sequence of a recent molecular phylogeny of Onagraceae, ecology and growth forms are more important than evolutionary relationships with respect to abundance, degree of grouping, and morphology of vestured pits. Designation of vesture types is not warranted based on the distribution of named types in Onagraceae and descriptive adjectives seem more useful, although more data on vesturing in the family are needed before patterns of diversity and their extent can be fully ascertained. -
RESPOSTAS MORFOLÓGICAS DE Ludwigia Helminthorrhiza (MART.) H.HARA (ONAGRACEAE) À SAZONALIDADE HÍDRICA DO PANTANAL
Oecologia Australis 23(4):874-890, 2019 https://doi.org/10.4257/oeco.2019.2304.12 RESPOSTAS MORFOLÓGICAS DE Ludwigia helminthorrhiza (MART.) H.HARA (ONAGRACEAE) À SAZONALIDADE HÍDRICA DO PANTANAL Maria Aparecida Cavichioli de Santana1*, Gisele Catian2,3 & Edna Scremin-Dias3 1 Universidade Federal de Mato Grosso do Sul, Instituto de Biociências, Faculdade de Ciências Biológicas, Cidade Universitária, s/n, Caixa Postal 549, CEP 79070-900, Campo Grande, MS, Brasil. 2 Universidade Federal de Mato Grosso, Departamento de Ciências Biológicas, Cidade Universitária, Av. dos Estudantes, 5055, CEP 78735-901, Rondonópolis, MT, Brasil. 3 Universidade Federal de Mato Grosso do Sul, Instituto de Biociências, Programa de Pós-Graduação Biologia Vegetal, Cidade Universitária, s/n, CP 549, CEP 79070-900, Campo Grande, MS, Brasil. E-mails: [email protected] (*autor correspondente); [email protected]; [email protected] Resumo: Em planícies de inundação, espécies de macrófitas respondem à sazonalidade hídrica por meio de alteração morfológica. Órgãos vegetativos de Ludwigia helminthorrhiza (Myrtales, Onagraceae) podem desenvolver-se em ambiente aquático e em solo livre de inundação. Acreditamos que órgãos vegetativos de plantas do segundo ambiente não apresentem adaptações típicas (e.g., aerênquima, redução de lignificação, desenvolvimento de raízes adventícias) de ambientes aquáticos. Mediu-se o comprimento, largura e espessura do limbo; espessura do caule; comprimento dos entrenós; e comprimento das raízes de indivíduos dos dois ambientes. Analisou-se a anatomia das porções medianas dos órgãos e quantificou-se os estômatos. Órgãos vegetativos foram maiores nas plantas desenvolvidas na água; densidade de estômatos semelhante nas faces do limbo nos dois ambientes, entretanto maior no solo seco. -
An Assessment of Exotic Species in the Tonle Sap Biosphere Reserve
AN ASSESSMENT OF EXOTIC SPECIES IN THE TONLE SAP BIOSPHERE RESERVE AND ASSOCIATED THREATS TO BIODIVERSITY A RESOURCE DOCUMENT FOR THE MANAGEMENT OF INVASIVE ALIEN SPECIES December 2006 Robert van Zalinge (compiler) This publication is a technical output of the UNDP/GEF-funded Tonle Sap Conservation Project Executive Summary Introduction This report is mainly a literature review. It attempts to put together all the available information from recent biological surveys, and environmental and resource use studies in the Tonle Sap Biosphere Reserve (TSBR) in order to assess the status of exotic species and report any information on their abundance, distribution and impact. For those exotic species found in the TSBR, it is examined whether they can be termed as being an invasive alien species (IAS). IAS are exotic species that pose a threat to native ecosystems, economies and/or human health. It is widely believed that IAS are the second most significant threat to biodiversity worldwide, following habitat destruction. In recognition of the threat posed by IAS the Convention on Biological Diversity puts forward the following strategy to all parties in Article 8h: “each contracting party shall as far as possible and as appropriate: prevent the introduction of, control, or eradicate those alien species which threaten ecosystems, habitats or species”. The National Assembly of Cambodia ratified the Convention on Biological Diversity in 1995. After reviewing the status of exotic species in the Tonle Sap from the literature, as well as the results from a survey based on questionnaires distributed among local communities, the main issues are discussed, possible strategies to combat the spread of alien species that are potentially invasive are examined, and recommendations are made to facilitate the implementation of a strategy towards reducing the impact of these species on the TSBR ecosystem. -
Arbuscular Mycorrhizal Fungi and Dark Septate Fungi in Plants Associated with Aquatic Environments Doi: 10.1590/0102-33062016Abb0296
Arbuscular mycorrhizal fungi and dark septate fungi in plants associated with aquatic environments doi: 10.1590/0102-33062016abb0296 Table S1. Presence of arbuscular mycorrhizal fungi (AMF) and/or dark septate fungi (DSF) in non-flowering plants and angiosperms, according to data from 62 papers. A: arbuscule; V: vesicle; H: intraradical hyphae; % COL: percentage of colonization. MYCORRHIZAL SPECIES AMF STRUCTURES % AMF COL AMF REFERENCES DSF DSF REFERENCES LYCOPODIOPHYTA1 Isoetales Isoetaceae Isoetes coromandelina L. A, V, H 43 38; 39 Isoetes echinospora Durieu A, V, H 1.9-14.5 50 + 50 Isoetes kirkii A. Braun not informed not informed 13 Isoetes lacustris L.* A, V, H 25-50 50; 61 + 50 Lycopodiales Lycopodiaceae Lycopodiella inundata (L.) Holub A, V 0-18 22 + 22 MONILOPHYTA2 Equisetales Equisetaceae Equisetum arvense L. A, V 2-28 15; 19; 52; 60 + 60 Osmundales Osmundaceae Osmunda cinnamomea L. A, V 10 14 Salviniales Marsileaceae Marsilea quadrifolia L.* V, H not informed 19;38 Salviniaceae Azolla pinnata R. Br.* not informed not informed 19 Salvinia cucullata Roxb* not informed 21 4; 19 Salvinia natans Pursh V, H not informed 38 Polipodiales Dryopteridaceae Polystichum lepidocaulon (Hook.) J. Sm. A, V not informed 30 Davalliaceae Davallia mariesii T. Moore ex Baker A not informed 30 Onocleaceae Matteuccia struthiopteris (L.) Tod. A not informed 30 Onoclea sensibilis L. A, V 10-70 14; 60 + 60 Pteridaceae Acrostichum aureum L. A, V, H 27-69 42; 55 Adiantum pedatum L. A not informed 30 Aleuritopteris argentea (S. G. Gmel) Fée A, V not informed 30 Pteris cretica L. A not informed 30 Pteris multifida Poir. -
Phytopharmacological Activities of Ludwigia Hyssopifolia (G
Deepak V. S. et al. /Asian Journal of Research in Chemistry and Pharmaceutical Sciences. 7(2), 2019, 781-789. Review Article ISSN: 2349 – 7106 Asian Journal of Research in Chemistry and Pharmaceutical Sciences Journal home page: www.ajrcps.com PHYTOPHARMACOLOGICAL ACTIVITIES OF LUDWIGIA HYSSOPIFOLIA (G. DON) EXELL: A REVIEW V. S. Deepak*1, A. Suresh 1, C. K. Amritha 1, P. Prajitha 1, Hiba Faslu 1 1* Department of Pharmacology, Devaki Amma Memorial College of Pharmacy, Malappuram, Kerala, India. ABSTRACT Ludwigia hyssopifolia (G. Don) Exell, commonly known as the water primrose is a broad leaf weed which is extensively grown in Bangladesh, Ceylon and in all parts of India. In the traditional system of medicine, Ludwigia hyssopifolia have been recommended for the treatment of diarrhoea, dysentery, flatulence, jaundice, spitting of blood, leucorrhoea. The plant has also been suggested to possess astringent, anthelmintic, carminative and diuretic actions. Previous phytochemical investigation of plant revealed the presence of flavonoids like vitexin, isovitexin, orietin, Isorietin, alkaloid like piperine and the plant sterol like β-sitosterol. The present review highlights the taxonomical, botanical, phytoconstituents, pharmacological discussion on Ludwigia hyssopifolia . KEYWORDS Ludwigia hyssopifolia (G. Don) Exell, Onagraceae, Traditional use, Phytochemical constituents, Pharmacological activity and Bioactivity. INTRODUCTON People have been using medicinal plants for various Author for Correspondence: therapeutic purposes since prehistoric period. The knowledge about the traditional use of medicinal plants has always explored the search for new Deepak V S, therapeutic cures. The traditional systems of Department of Pharmacology, treatments with medicinal plants are often cheaper, locally available, simple medicinal preparations Devaki Amma Memorial College of Pharmacy, which bring out beneficial results 1. -
UNIVERSIDADE ESTADUAL DE CAMPINAS Instituto De Biologia
UNIVERSIDADE ESTADUAL DE CAMPINAS Instituto de Biologia TIAGO PEREIRA RIBEIRO DA GLORIA COMO A VARIAÇÃO NO NÚMERO CROMOSSÔMICO PODE INDICAR RELAÇÕES EVOLUTIVAS ENTRE A CAATINGA, O CERRADO E A MATA ATLÂNTICA? CAMPINAS 2020 TIAGO PEREIRA RIBEIRO DA GLORIA COMO A VARIAÇÃO NO NÚMERO CROMOSSÔMICO PODE INDICAR RELAÇÕES EVOLUTIVAS ENTRE A CAATINGA, O CERRADO E A MATA ATLÂNTICA? Dissertação apresentada ao Instituto de Biologia da Universidade Estadual de Campinas como parte dos requisitos exigidos para a obtenção do título de Mestre em Biologia Vegetal. Orientador: Prof. Dr. Fernando Roberto Martins ESTE ARQUIVO DIGITAL CORRESPONDE À VERSÃO FINAL DA DISSERTAÇÃO/TESE DEFENDIDA PELO ALUNO TIAGO PEREIRA RIBEIRO DA GLORIA E ORIENTADA PELO PROF. DR. FERNANDO ROBERTO MARTINS. CAMPINAS 2020 Ficha catalográfica Universidade Estadual de Campinas Biblioteca do Instituto de Biologia Mara Janaina de Oliveira - CRB 8/6972 Gloria, Tiago Pereira Ribeiro da, 1988- G514c GloComo a variação no número cromossômico pode indicar relações evolutivas entre a Caatinga, o Cerrado e a Mata Atlântica? / Tiago Pereira Ribeiro da Gloria. – Campinas, SP : [s.n.], 2020. GloOrientador: Fernando Roberto Martins. GloDissertação (mestrado) – Universidade Estadual de Campinas, Instituto de Biologia. Glo1. Evolução. 2. Florestas secas. 3. Florestas tropicais. 4. Poliploide. 5. Ploidia. I. Martins, Fernando Roberto, 1949-. II. Universidade Estadual de Campinas. Instituto de Biologia. III. Título. Informações para Biblioteca Digital Título em outro idioma: How can chromosome number -
Wetland Plants of the Townsville − Burdekin
WETLAND PLANTS OF THE TOWNSVILLE − BURDEKIN Dr Greg Calvert & Laurence Liessmann (RPS Group, Townsville) For Lower Burdekin Landcare Association Incorporated (LBLCA) Working in the local community to achieve sustainable land use THIS PUBLICATION WAS MADE POSSIBLE THROUGH THE SUPPORT OF: Burdekin Shire Council Calvert, Greg Liessmann, Laurence Wetland Plants of the Townsville–Burdekin Flood Plain ISBN 978-0-9925807-0-4 First published 2014 by Lower Burdekin Landcare Association Incorporated (LBLCA) PO Box 1280, Ayr, Qld, 4807 Graphic Design by Megan MacKinnon (Clever Tangent) Printed by Lotsa Printing, Townsville © Lower Burdekin Landcare Association Inc. Copyright protects this publication. Except for purposes permitted under the Copyright Act, reproduction by whatever means is prohibited without prior permission of LBLCA All photographs copyright Greg Calvert Please reference as: Calvert G., Liessmann L. (2014) Wetland Plants of the Townsville–Burdekin Flood Plain. Lower Burdekin Landcare Association Inc., Ayr. The Queensland Wetlands Program supports projects and activities that result in long-term benefits to the sustainable management, wise use and protection of wetlands in Queensland. The tools developed by the Program help wetlands landholders, managers and decision makers in government and industry. The Queensland Wetlands Program is currently funded by the Queensland Government. Disclaimer: This document has been prepared with all due diligence and care, based on the best available information at the time of publication. The authors and funding bodies hold no responsibility for any errors or omissions within this document. Any decisions made by other parties based on this document are solely the responsibility of those parties. Information contained in this document is from a number of sources and, as such, does not necessarily represent government or departmental policy. -
Study on Morphology, Anatomy, Preliminary Phytochemical Test, Nutritional Values and Antimicrobial Activities of Leaves of Ludwigia Octovalvis (Jacq.) Raven
Dagon University Commemoration of 25th Anniversary Silver Jubilee Research Journal 2019, Vol.9, No.2 321 Study on Morphology, Anatomy, Preliminary Phytochemical Test, Nutritional Values and Antimicrobial Activities of leaves of Ludwigia octovalvis (Jacq.) Raven Dr Lai Win Aung1, Daw Khin Ei Chaw2 Abstract Ludwigia octovalvis (Jacq.) Raven is a perennial herb and it belongs to the family Onagraceae in order Myrtales. It is locally known as Taw-Lay-Nyin and collected from North Dagon Township, Yangon Region. The morphological characters of vegetative and reproductive parts of the plants wereidentified and classified by the use of available literatures. Then, the leaves samples were dried powdered and kept in airtight container to diagnose characters of powdered drug. In microscopical study, the stomata (anomocytic type)was found abundantly on the lower surface of the leaves. Phytochemical analysis of powdered leaves indicated that the presence of alkaloids, saponins, reducing sugar, carbohydrates, glycosides, flavonoids, tannins, phenolic compounds, terpenoids and steroids. The nutritional values of powdered leaves such asprotein, fat, fiber, carbohydrate and energy value was conducted at Department of Research and Innovation Analysis Department. By using paper disc diffusion method,antimicrobial activities of various crude extracts were carried out with seven test organisms. The ethanolic and methanolic extracts of exhibited the highest against on different pathogenic microorganisms. Therefore, it was observed that Ludwigia octovalvis (Jacq.) Raven is endowed with antimicrobial activities, nutritional value and bioactive constituents provided to be used in traditional medicine. Keywords: Morphology, Anatomy, Phytochemical, Nutritional value, Antimicrobial activity Introduction Plants are well known as a major source of modern medicines. Medicinal plants are an essential part of the traditional health care systems. -
Chiang Mai University Journal of Natural Sciences: 1
Chiang Mai University Journal of Natural Sciences: https://cmuj.cmu.ac.th 1 Research article Pollen Morphology in Various Life-form of Aquatic Macrophytes Ratchaneekorn Sangsuk1 , Henrik Baslev2, and Arunothai Jampeetong1,* 1 Department of Biology, Faculty of Science, Chiang Mai University, Mueang, Chiang Mai, 50200, Thailand 2 Department of Biology, Aarhus University, Ny Munkegade 114-116, DK-8000 Aarhus C., Denmark Abstract Ability of angiosperms to produce flowers and seeds for the sexual Editor: Wasu Pathom-aree, reproduction is important also in aquatic plants. Pollination in aquatic plants is Chiang Mai University, Thailand facilitated by insects, wind, and water, however, pollen morphology related to the Article history: Received: October 7, 2020; plant’s life forms and pollen dispersal are not well described. This study Revised: December 22, 2020; Accepted: December 25, 2020; investigates pollen morphology of selected aquatic macrophytes. Plants were Published online: March 18, 2021 collected and preserved as dried specimens. Mature pollen grains of each species Corresponding author: Arunothai Jampeetong, were separated from the anthers and then placed on glass slides and mounted E-mail: [email protected] with distilled water. Pollen shape and size were observed under a light microscope (LM). Number of apertures and exine ornamentation were examined using scanning electron microscope (SEM). Closely related plant species had similar pollen morphology. Among the 28 species studied, pollen size varied from small to very large (range 10–200 µm) and their shapes were prolate-spheroidal, prolate, oblate, suboblate, and oblate-spheroidal. Some species had inaperturate pollen grains; the remainders were monoaperture, triaperture or polyaperture. Both colpate and porate apertures were found.