Issn 1727-1320
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Generic Names in Magnaporthales Ning Zhang, Jing Luo, Amy Y
Generic names in Magnaporthales Ning Zhang, Jing Luo, Amy Y. Rossman, Takayuki Aoki, Izumi Chuma, Pedro W. Crous, Ralph Dean, Ronald P. de Vries, Nicole Donofrio, Kevin D. Hyde, et al. To cite this version: Ning Zhang, Jing Luo, Amy Y. Rossman, Takayuki Aoki, Izumi Chuma, et al.. Generic names in Magnaporthales. IMA Fungus, 2016, 7 (1), pp.155-159. 10.5598/imafungus.2016.07.01.09. hal- 01608608 HAL Id: hal-01608608 https://hal.archives-ouvertes.fr/hal-01608608 Submitted on 28 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution - ShareAlike| 4.0 International License IMA FUNGUS · 7(1): 155–159 (2016) doi:10.5598/imafungus.2016.07.01.09 ARTICLE Generic names in Magnaporthales Ning Zhang1, Jing Luo1, Amy Y. Rossman2, Takayuki Aoki3, Izumi Chuma4, Pedro W. Crous5, Ralph Dean6, Ronald P. de Vries5,7, Nicole Donofrio8, Kevin D. Hyde9, Marc-Henri Lebrun10, Nicholas J. Talbot11, Didier Tharreau12, Yukio Tosa4, Barbara Valent13, Zonghua Wang14, and Jin-Rong Xu15 1Department of Plant Biology and Pathology, Rutgers University, New Brunswick, NJ 08901, USA; corresponding author e-mail: zhang@aesop. -
Notizbuchartige Auswahlliste Zur Bestimmungsliteratur Für Unitunicate Pyrenomyceten, Saccharomycetales Und Taphrinales
Pilzgattungen Europas - Liste 9: Notizbuchartige Auswahlliste zur Bestimmungsliteratur für unitunicate Pyrenomyceten, Saccharomycetales und Taphrinales Bernhard Oertel INRES Universität Bonn Auf dem Hügel 6 D-53121 Bonn E-mail: [email protected] 24.06.2011 Zur Beachtung: Hier befinden sich auch die Ascomycota ohne Fruchtkörperbildung, selbst dann, wenn diese mit gewissen Discomyceten phylogenetisch verwandt sind. Gattungen 1) Hauptliste 2) Liste der heute nicht mehr gebräuchlichen Gattungsnamen (Anhang) 1) Hauptliste Acanthogymnomyces Udagawa & Uchiyama 2000 (ein Segregate von Spiromastix mit Verwandtschaft zu Shanorella) [Europa?]: Typus: A. terrestris Udagawa & Uchiyama Erstbeschr.: Udagawa, S.I. u. S. Uchiyama (2000), Acanthogymnomyces ..., Mycotaxon 76, 411-418 Acanthonitschkea s. Nitschkia Acanthosphaeria s. Trichosphaeria Actinodendron Orr & Kuehn 1963: Typus: A. verticillatum (A.L. Sm.) Orr & Kuehn (= Gymnoascus verticillatus A.L. Sm.) Erstbeschr.: Orr, G.F. u. H.H. Kuehn (1963), Mycopath. Mycol. Appl. 21, 212 Lit.: Apinis, A.E. (1964), Revision of British Gymnoascaceae, Mycol. Pap. 96 (56 S. u. Taf.) Mulenko, Majewski u. Ruszkiewicz-Michalska (2008), A preliminary checklist of micromycetes in Poland, 330 s. ferner in 1) Ajellomyces McDonough & A.L. Lewis 1968 (= Emmonsiella)/ Ajellomycetaceae: Lebensweise: Z.T. humanpathogen Typus: A. dermatitidis McDonough & A.L. Lewis [Anamorfe: Zymonema dermatitidis (Gilchrist & W.R. Stokes) C.W. Dodge; Synonym: Blastomyces dermatitidis Gilchrist & Stokes nom. inval.; Synanamorfe: Malbranchea-Stadium] Anamorfen-Formgattungen: Emmonsia, Histoplasma, Malbranchea u. Zymonema (= Blastomyces) Bestimm. d. Gatt.: Arx (1971), On Arachniotus and related genera ..., Persoonia 6(3), 371-380 (S. 379); Benny u. Kimbrough (1980), 20; Domsch, Gams u. Anderson (2007), 11; Fennell in Ainsworth et al. (1973), 61 Erstbeschr.: McDonough, E.S. u. A.L. -
Resolving the Polyphyletic Nature of Pyricularia (Pyriculariaceae)
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY ▪:1–36. Resolving the polyphyletic nature of Pyricularia (Pyriculariaceae) S. Klaubauf1,2, D. Tharreau3, E. Fournier4, J.Z. Groenewald1, P.W. Crous1,5,6*, R.P. de Vries1,2, and M.-H. Lebrun7* 1CBS-KNAW Fungal Biodiversity Centre, 3584 CT Utrecht, The Netherlands; 2Fungal Molecular Physiology, Utrecht University, Utrecht, The Netherlands; 3UMR BGPI, CIRAD, Campus International de Baillarguet, F-34398 Montpellier, France; 4UMR BGPI, INRA, Campus International de Baillarguet, F-34398 Montpellier, France; 5Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa; 6Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands; 7UR1290 INRA BIOGER-CPP, Campus AgroParisTech, F-78850 Thiverval-Grignon, France *Correspondence: P.W. Crous, [email protected]; M.-H. Lebrun, [email protected] Abstract: Species of Pyricularia (magnaporthe-like sexual morphs) are responsible for major diseases on grasses. Pyricularia oryzae (sexual morph Magnaporthe oryzae) is responsible for the major disease of rice called rice blast disease, and foliar diseases of wheat and millet, while Pyricularia grisea (sexual morph Magnaporthe grisea) is responsible for foliar diseases of Digitaria. Magnaporthe salvinii, M. poae and M. rhizophila produce asexual spores that differ from those of Pyricularia sensu stricto that has pyriform, 2-septate conidia produced on conidiophores with sympodial proliferation. Magnaporthe salvinii was recently allocated to Nakataea, while M. poae and M. rhizophila were placed in Magnaporthiopsis. To clarify the taxonomic relationships among species that are magnaporthe- or pyricularia-like in morphology, we analysed phylogenetic relationships among isolates representing a wide range of host plants by using partial DNA sequences of multiple genes such as LSU, ITS, RPB1, actin and calmodulin. -
Genome Wide Analysis of the Transition to Pathogenic Lifestyles in Magnaporthales Fungi Received: 25 January 2018 Ning Zhang1,2, Guohong Cai3, Dana C
www.nature.com/scientificreports OPEN Genome wide analysis of the transition to pathogenic lifestyles in Magnaporthales fungi Received: 25 January 2018 Ning Zhang1,2, Guohong Cai3, Dana C. Price4, Jo Anne Crouch 5, Pierre Gladieux6, Bradley Accepted: 29 March 2018 Hillman1, Chang Hyun Khang7, Marc-Henri LeBrun8, Yong-Hwan Lee9, Jing Luo1, Huan Qiu10, Published: xx xx xxxx Daniel Veltri11, Jennifer H. Wisecaver12, Jie Zhu7 & Debashish Bhattacharya2 The rice blast fungus Pyricularia oryzae (syn. Magnaporthe oryzae, Magnaporthe grisea), a member of the order Magnaporthales in the class Sordariomycetes, is an important plant pathogen and a model species for studying pathogen infection and plant-fungal interaction. In this study, we generated genome sequence data from fve additional Magnaporthales fungi including non-pathogenic species, and performed comparative genome analysis of a total of 13 fungal species in the class Sordariomycetes to understand the evolutionary history of the Magnaporthales and of fungal pathogenesis. Our results suggest that the Magnaporthales diverged ca. 31 millon years ago from other Sordariomycetes, with the phytopathogenic blast clade diverging ca. 21 million years ago. Little evidence of inter-phylum horizontal gene transfer (HGT) was detected in Magnaporthales. In contrast, many genes underwent positive selection in this order and the majority of these sequences are clade-specifc. The blast clade genomes contain more secretome and avirulence efector genes, which likely play key roles in the interaction between Pyricularia species and their plant hosts. Finally, analysis of transposable elements (TE) showed difering proportions of TE classes among Magnaporthales genomes, suggesting that species-specifc patterns may hold clues to the history of host/environmental adaptation in these fungi. -
Nutritional Characteristics of Hydrilla Verticillata and Its Effect on Two Biological Control Agents
Nutritional characteristics of Hydrilla verticillata and its effect on two biological control agents J.F. Shearer, M.J. Grodowitz and J.E. Freedman Summary A complex of abiotic and biotic factors is known to impact the establishment and success of biological control agents. Experiments using the ephydrid fly Hydrellia pakistanae Deonier have demonstrated that hydrilla, Hydrilla verticillata (L.f.) Royle, containing low protein content appears to impact larval development time and the number of eggs oviposited per female. Eggs per female were over twofold higher for larvae reared on hydrilla containing 2.4-fold more protein. Mean adult female fly weight peaked when emergence is low (i.e. low crowding) and leaf protein content is high. The hy- drilla biological control pathogen Mycoleptodiscus terrestris (Gerd.) Ostazeski also responds to plant nutritional condition. The nutritional status of hydrilla shoots affects M. terrestris vegetative growth, disease development and conidia and microsclerotia production. High protein content in shoot tissues was associated with a more than threefold increase in conidia production and maximum disease se- verity. In contrast, low protein content in shoot tissues stimulated a 3.7-fold increase in melanized mi- crosclerotia, reproductive structures that are more persistent in the environment than conidia. These studies suggest that the nutritional condition of target plants cannot be excluded as an important factor in efficacy of biological control agents. Both agents responded to favorable conditions by reproducing prolifically, which ultimately resulted in increased host damage. Keywords: Hydrellia pakistanae, Mycoleptodiscus terrestris, evaluation. Introduction stanae individuals have been released with established populations occurring in Florida, Arkansas, Alabama, In aquatic systems, there is scant information on the Georgia and Texas (Center et al., 1997; Julien and Grif- impact of biological control agents relative to the fiths, 1998; Grodowitz et al., 1999). -
Molecular and Morphological Characterization of Pyricularia and Allied Genera
Mycologia, 97(5), 2005, pp. 1002–1011. # 2005 by The Mycological Society of America, Lawrence, KS 66044-8897 Molecular and morphological characterization of Pyricularia and allied genera B. Bussaban (1880) with the type species, P. grisea (Cooke) Sacc., S. Lumyong1 which originally was described from crabgrass (Digi- Department of Biology, Faculty of Science, Chiang Mai taria sanguinalis L.). The name ‘‘Pyricularia’’ refers University, Chiang Mai 50200, Thailand to the pyriform shape of the conidia. Cavara (1892) P. Lumyong subsequently described P. oryzae Cav. from rice (Oryza Department of Plant Pathology, Faculty of Agriculture, sativa L.), a taxon with similar morphology to P. Chiang Mai University, Chiang Mai 50200, Thailand grisea. Despite the lack of obvious morphological 50200 differences, these two taxa have been maintained as separate species. Rossman et al (1990) argued that P. T. Seelanan oryzae should be synonymized with P. grisea and Department of Botany, Faculty of Science, grouped these two anamorphs under the teleomorph Chulalongkorn University, Bangkok 10330, Thailand Magnaporthe grisea (Hebert) Barr. Recent molecular D.C. Park genetic analyses, however, have indicated that Pyr- E.H.C. McKenzie icularia species isolated from different hosts are Landcare Research, Private Bag 92170, Auckland, genetically distinct (Borromeo et al 1993, Shull and New Zealand Hamer 1994, Kato et al 2000). Based on RFLP and K.D. Hyde DNA sequence analysis, Borromeo et al (1993) and Centre for Research in Fungal Diversity, Department of Kato et al (2000) suggested that the Pyricularia Ecology & Biodiversity, The University of Hong Kong, isolates from Digitaria sp. and rice represent distinct Pokfulam Road, Hong Kong SAR, China species. -
Cover Page 2017 James P. Cuda, Ph.D. Professor and Fulbright
IPM Award Nomination 1 James Cuda Cover Page 2017 James P. Cuda, Ph.D. Professor and Fulbright Scholar Charles Steinmetz Hall UF/IFAS Entomology & Nematology Dept. Bldg. 970, Natural Area Drive PO Box 110620 Gainesville, FL 32611-0620 (352) 273-3921 [email protected] IPM Award Nomination 2 James Cuda College of Agricultural and Life Sciences Steinmetz Hall, Bldg. 970 Entomology and Nematology Department 1881 Natural Area Drive P.O Box 110620 Gainesville, FL 32611-0620 352-273-3901 352-392-0190 Fax January 24, 2017 Southeastern Branch of the ESA Awards Committee Dear Committee: Although I have only recently joined the Entomology and Nematology Department at the University of Florida, I have quickly come to learn of Dr. Jim Cuda’s accomplishments and passion for research and education in in biocontrol and integrated pest management. As a consequence, I have decided to nominate him for the ESA SEB Recognition Award in IPM and believe he is deserving of your strongest consideration. Jim has developed an internationally recognized program in biocontrol of invasive weeds and has become a globally recognized authority in identifying and evaluating potential biocontrol agents of invasive weeds. He has made significant contributions to the successful management of important invasive weed species in both aquatic and terrestrial environments. He also has made important discoveries in understanding the attributes of successful introduction of exotic biocontrol agents in a manner that successfully mitigates the invasion without disruption of native species. Information from this work has been critical to the management of important invasive plant species such as the tropical soda apple. -
A New Order of Aquatic and Terrestrial Fungi for Achroceratosphaeria and Pisorisporium Gen
Persoonia 34, 2015: 40–49 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158515X685544 Pisorisporiales, a new order of aquatic and terrestrial fungi for Achroceratosphaeria and Pisorisporium gen. nov. in the Sordariomycetes M. Réblová1, J. Fournier 2, V. Štěpánek3 Key words Abstract Four morphologically similar specimens of an unidentified perithecial ascomycete were collected on decaying wood submerged in fresh water. Phylogenetic analysis of DNA sequences from protein-coding and Achroceratosphaeria ribosomal nuclear loci supports the placement of the unidentified fungus together with Achroceratosphaeria in a freshwater strongly supported monophyletic clade. The four collections are described as two new species of the new genus Hypocreomycetidae Pisorisporium characterised by non-stromatic, black, immersed to superficial perithecial ascomata, persistent para- Koralionastetales physes, unitunicate, persistent asci with an amyloid apical annulus and hyaline, fusiform, cymbiform to cylindrical, Lulworthiales transversely multiseptate ascospores with conspicuous guttules. The asexual morph is unknown and no conidia multigene analysis were formed in vitro or on the natural substratum. The clade containing Achroceratosphaeria and Pisorisporium is systematics introduced as the new order Pisorisporiales, family Pisorisporiaceae in the class Sordariomycetes. It represents a new lineage of aquatic fungi. A sister relationship for Pisorisporiales with the Lulworthiales and Koralionastetales is weakly supported -
An Overview of the Systematics of the Sordariomycetes Based on a Four-Gene Phylogeny
Mycologia, 98(6), 2006, pp. 1076–1087. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny Ning Zhang of 16 in the Sordariomycetes was investigated based Department of Plant Pathology, NYSAES, Cornell on four nuclear loci (nSSU and nLSU rDNA, TEF and University, Geneva, New York 14456 RPB2), using three species of the Leotiomycetes as Lisa A. Castlebury outgroups. Three subclasses (i.e. Hypocreomycetidae, Systematic Botany & Mycology Laboratory, USDA-ARS, Sordariomycetidae and Xylariomycetidae) currently Beltsville, Maryland 20705 recognized in the classification are well supported with the placement of the Lulworthiales in either Andrew N. Miller a basal group of the Sordariomycetes or a sister group Center for Biodiversity, Illinois Natural History Survey, of the Hypocreomycetidae. Except for the Micro- Champaign, Illinois 61820 ascales, our results recognize most of the orders as Sabine M. Huhndorf monophyletic groups. Melanospora species form Department of Botany, The Field Museum of Natural a clade outside of the Hypocreales and are recognized History, Chicago, Illinois 60605 as a distinct order in the Hypocreomycetidae. Conrad L. Schoch Glomerellaceae is excluded from the Phyllachorales Department of Botany and Plant Pathology, Oregon and placed in Hypocreomycetidae incertae sedis. In State University, Corvallis, Oregon 97331 the Sordariomycetidae, the Sordariales is a strongly supported clade and occurs within a well supported Keith A. Seifert clade containing the Boliniales and Chaetosphaer- Biodiversity (Mycology and Botany), Agriculture and iales. Aspects of morphology, ecology and evolution Agri-Food Canada, Ottawa, Ontario, K1A 0C6 Canada are discussed. Amy Y. -
A Review of the Phylogeny and Biology of the Diaporthales
Mycoscience (2007) 48:135–144 © The Mycological Society of Japan and Springer 2007 DOI 10.1007/s10267-007-0347-7 REVIEW Amy Y. Rossman · David F. Farr · Lisa A. Castlebury A review of the phylogeny and biology of the Diaporthales Received: November 21, 2006 / Accepted: February 11, 2007 Abstract The ascomycete order Diaporthales is reviewed dieback [Apiognomonia quercina (Kleb.) Höhn.], cherry based on recent phylogenetic data that outline the families leaf scorch [A. erythrostoma (Pers.) Höhn.], sycamore can- and integrate related asexual fungi. The order now consists ker [A. veneta (Sacc. & Speg.) Höhn.], and ash anthracnose of nine families, one of which is newly recognized as [Gnomoniella fraxinii Redlin & Stack, anamorph Discula Schizoparmeaceae fam. nov., and two families are recircum- fraxinea (Peck) Redlin & Stack] in the Gnomoniaceae. scribed. Schizoparmeaceae fam. nov., based on the genus Diseases caused by anamorphic members of the Diaportha- Schizoparme with its anamorphic state Pilidella and includ- les include dogwood anthracnose (Discula destructiva ing the related Coniella, is distinguished by the three- Redlin) and butternut canker (Sirococcus clavigignenti- layered ascomatal wall and the basal pad from which the juglandacearum Nair et al.), both solely asexually reproduc- conidiogenous cells originate. Pseudovalsaceae is recog- ing species in the Gnomoniaceae. Species of Cytospora, the nized in a restricted sense, and Sydowiellaceae is circum- anamorphic state of Valsa, in the Valsaceae cause diseases scribed more broadly than originally conceived. Many on Eucalyptus (Adams et al. 2005), as do species of Chryso- species in the Diaporthales are saprobes, although some are porthe and its anamorphic state Chrysoporthella (Gryzen- pathogenic on woody plants such as Cryphonectria parasit- hout et al. -
Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi Laura H
University of Kentucky UKnowledge Plant Pathology Faculty Publications Plant Pathology 12-1-2015 Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi Laura H. Okagaki North Carolina State University Cristiano C. Nunes North Carolina State University Joshua Sailsbery North Carolina State University Brent Clay North Carolina State University Doug Brown North Carolina State University See next page for additional authors Right click to open a feedback form in a new tab to let us know how this document benefits oy u. Follow this and additional works at: https://uknowledge.uky.edu/plantpath_facpub Part of the Plant Pathology Commons Repository Citation Okagaki, Laura H.; Nunes, Cristiano C.; Sailsbery, Joshua; Clay, Brent; Brown, Doug; John, Titus; Oh, Yeonyee; Young, Nelson; Fitzgerald, Michael; Haas, Brian J.; Zeng, Qiandong; Young, Sarah; Adiconis, Xian; Fan, Lin; Levin, Joshua Z.; Mitchell, Thomas K.; Okubara, Patricia A.; Farman, Mark L.; Kohn, Linda M.; Birren, Bruce; Ma, Li-Jun; and Dean, Ralph A., "Genome Sequences of Three Phytopathogenic Species of the Magnaporthaceae Family of Fungi" (2015). Plant Pathology Faculty Publications. 50. https://uknowledge.uky.edu/plantpath_facpub/50 This Article is brought to you for free and open access by the Plant Pathology at UKnowledge. It has been accepted for inclusion in Plant Pathology Faculty Publications by an authorized administrator of UKnowledge. For more information, please contact [email protected]. Authors Laura H. Okagaki, Cristiano C. Nunes, Joshua Sailsbery, Brent Clay, Doug Brown, Titus John, Yeonyee Oh, Nelson Young, Michael Fitzgerald, Brian J. Haas, Qiandong Zeng, Sarah Young, Xian Adiconis, Lin Fan, Joshua Z. Levin, Thomas K. -
Osaka University Knowledge Archive : OUKA
Title Screening of Novel Secondary Metabolites from Endophytic Fungi by Chemical Library Analysis Author(s) Siriwach, Ratklao Citation Issue Date Text Version ETD URL https://doi.org/10.18910/26207 DOI 10.18910/26207 rights Note Osaka University Knowledge Archive : OUKA https://ir.library.osaka-u.ac.jp/ Osaka University Doctoral Dissertation Screening of Novel Secondary Metabolites from Endophytic Fungi by Chemical Library Analysis 化合物データベースをを利用利用した植物内生菌からの新規生理活性物質のの探探探索索 Ratklao Siriwach July 2013 Laboratory of Molecular Microbiology International Center for Biotechnology Department of Biotechnology, Graduate School of Engineering, Osaka University Contents Contents 2 List of figures 5 List of tables 6 CHAPTER 1: Introduction 7 1.1 Critical dearth of new substances for human application 7 1.2 Natural products as a potential source for new compounds 8 1.3 Endophytic fungi 12 1.3.1 General information and definition 12 1.3.2 Plant-fungal interaction, co-evolution and relationship 12 1.3.2.1 Mechanism in the establishment of endophytic symbiosis 13 1.3.2.2 Plant and fungi co-evolution 14 1.3.2.3 Plant – fungi relationship 16 1.3.2.4 Rationale for endophytic fungal isolation 17 1.4 Promising potential sources of bioactive compounds from endophytic fungi 18 1.4.1 Anticancer activity 19 1.4.2 Antioxidant activity 20 1.4.3 Antimicrobial activity 20 1.4.4 Other activities 22 1.5 Endophytic fungi producing bioactive compounds from medicinal plants in Thailand (tropical endophytic fungi) 22 1.6 Overview and objectives of this study 23 CHAPTER