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Zeitschrift/Journal: Arthropod Systematics and Phylogeny

Jahr/Year: 2014

Band/Volume: 72

Autor(en)/Author(s): Kjer Karl M., Zhou Xin, Frandsen Paul B., Thomas Jessica A., Blahnik Roger J.

Artikel/Article: Moving toward species-level phylogeny using ribosomal DNA and COI barcodes: an example from the diverse caddisfly genus Chimarra (Trichoptera: Philopotamidae) 345-354 72 (3): 345 – 354 19.12.2014

© Senckenberg Gesellschaft für Naturforschung, 2014.

Moving toward species-level phylogeny using ribosomal DNA and COI barcodes: an example from the diverse caddisfly genus Chimarra (Trichoptera: Philopotamidae)

Karl M. Kjer 1, Xin Zhou 2, Paul B. Frandsen 3, Jessica A. Thomas 4 & Roger J. Blahnik *, 5

1 Rutgers University, New Brunswick, NJ, USA, Department of Ecology, Evolution, and Natural Resources. 14 College Farm Rd. New Bruns­ wick, NJ 08901; Karl Kjer [[email protected]] — 2 BGI-Shenzhen, Bldg.11, 2nd Floor, Beishan Industrial Zone, Beishan Road, Yantian Dis­ trict, Shenzhen, Guangdong Province, China 518083; Xin Zhou [[email protected]] — 3 Rutgers University, New Brunswick, NJ, USA, Department of Entomology. 93 Lipman Drive, New Brunswick, NJ 08901; Paul Frandsen [[email protected]] — 4 Department of Biology, University of York, Heslington, York, United Kingdom, YO10 5DD; Jessica Thomas [[email protected]] — 5 University of Min­ nesota, Department of Entomology, 1980 Folwell Ave. St. Paul MN 55108; Roger Blahnik * [[email protected]] — * Corresponding author

Accepted 17.vii.2014. Published online at www.senckenberg.de/arthropod-systematics on 12.xii.2014.

Abstract The genus Chimarra (Trichoptera, Philopotamidae) is a cosmopolitan genus with over 700 species. The taxonomic history of Chimarra is discussed, with reference to how large genera are best subdivided. We also examine the phylogenetic utility of the COI “barcode” fragment and find it to be phylogenetically useful, within limits. Adding a single fragment of nuclear rRNA (specifically the 28S D2 region) converts the barcode hypothesis into a strongly supported phylogeny that is corroborated by a morphologically derived subgeneric classification. This suggests that a simple two gene dataset could be combined with morphological data in order to rapidly and inexpensively include a molecular component to generic revisions. We confirm the monophyly of Chimarra (Chimarra), C. (Curgia), C. (Otarrha), and core C. (Chimarrita). The C. (C.) tsudai group is also recovered. We make use of web-based materials, including the BOLD website (http:// www.boldsystems.org/), and keyhole markup language files (.kml format), which permit specimen data to be viewed on Google Earth. We suggest that static phylogenies presented in print could be dynamically updated with the use of these web materials.

Key words Trichoptera, Chimarra, COI, barcode, keyhole markup language, phylogenetic utility, generic taxonomy.

1. Introduction

The genus Chimarra Stephens, 1829 (Philopotamidae: is nearly cosmopolitan, although only marginally repre­ Chimarrinae), with over 780 described species (Wahl- sented in Europe (by C. marginata (Linnaeus), the type berg et al. 2014), is the largest in the order Trichoptera species) and northern Asia. It is absent from New Zea­ (recently surpassing Rhyacophila). Currently, about one land and the Chilean region of South America and most species in 20 within Trichoptera belongs in Chimarra, abundantly represented in tropical regions, especially the making the genus larger than most families of Tricho­ Neotropics (229 species) and southern Asia (321 species; ptera. Unlike Rhyacophila, which is primarily Holarctic Morse 2014). A large number of additional species will in distribution (extending into tropical Asia), Chimarra likely be described, especially since some regions where

ISSN 1863-7221 (print) | eISSN 1864-8312 (online) 345 Kjer et al.: Barcode data and Chimarra phylogenetics

the genus occurs are incompletely inventoried (various This process began in the early 1800s when a flood of tropical localities, and especially Africa, Madagascar and new species were being described and the generic infra­ India). Blahnik (1998) estimated that an ultimate size of structure established by Linnaeus seemed inadequate for 1000 or more species was possible and probably repre­ accommodating them. For Trichoptera, this process be­ sents a conservative estimate. One of the goals of this gan much later than in many taxa, with the majority of paper is to assess a relatively simple strategy of molecu­ the diversity for the order only being described after the lar sequencing in order to add to the phylogenetic infra­ middle of the 20th century, although many genera were structure for this large genus. This strategy could then be established much earlier. One disadvantage to erecting applied to other Trichoptera genera. new genera from within a broadly defined older genus is that the establishment of new genera may leave the original genus paraphyletic. The disadvantages of para­ 1.1. On Chimarra and other large genera phyletic taxa were not properly appreciated until after the work of Hennig (1950, 1966), and has led to the con­ We are also interested in how large genera come to be, vention of modern taxonomy, which requires monophyly and how they should be subdivided. It is acknowledged of taxa at all levels. A repercussion of this convention, that the size of a genus has a subjective component. In often criticized by non-taxonomists, is that it results in Trichoptera, genera tend to be conservatively defined, a considerable amount of nomenclatural instability due often based on distinctive larval differences (Wiggins to frequent changes in genus-species combinations. We 1981; Schmid 1979). Many genera within Trichoptera have observed a recent preference in systematics toward probably have considerable antiquity (Ross 1956; Wahl- establishing monophyletic genera, rather than arbitrar­ berg & Johanson 2014) and it is understood that genera ily splitting genera that are acknowledged to be mono­ are not synchronized across orders. A large genus could phyletic into additional taxa, thus avoiding the problem potentially be the result of an old lineage, speciating at a of nomenclatural instability when it is unnecessary. We normal rate, for a long time, without dramatic morpho­ agree with this philosophy, and for this reason, the focus logical change, or alternatively, a relatively young line­ in this paper is in trying to establish a useful subgeneric age that has experienced a rapid burst of speciation. The infrastructure for the genus Chimarra, rather than split­ large number of species in Chimarra is mainly due to the ting the genus into additional genera. However, for Chi­ fact that it has not been divided into additional genera, marra, subgeneric taxa probably have more or less the demonstrating how generic definitions are dependent on same level of taxonomic significance as genera in other the uncoordinated decisions of systematists. The current taxa. size of the genus has resulted from recent descriptions of taxa (more than half the species described in just the last 50 years), and thus its size does not reflect some a priori 1.2. History of taxonomic effort in decision to establish a large genus. There is some value Chimarra in maintaining a broadly defined genus Chimarra. The genus has a number of distinctive apomorphies (Blahnik There are currently 3 genera in the philopotamid subfam­ 1998) and its monophyly is not in question. Moreover, ily Chimarrinae: Edidiehlia (a monotypic genus known members of Chimarra are easily recognized wherever only from the holotype), Chimarrhodella and Chimarra, they occur, both in the adult and larval stages, and can be the latter with 4 recognized subgenera, C. (Chimarra), readily identified as Chimarra in ecological studies and C. (Curgia), C. (Otarrha), and C. (Chimarrita). Curgia, biomonitoring programs. New species of Chimarra can Otarrha, and Chimarrita are confined to the New World. be unambiguously assigned to the genus during the de­ Like many genera, Chimarra has a history of taxo­ scription process. In contrast, natural subdivisions of the nomic shifts. The first attempt to consider relationships genus have not always been obvious. The major disad­ within Chimarra, on a world scale, was presented by vantage of accepting such a large, undivided genus is that Ross (1956). The treatment was rather informal and the it tends to mask a great deal of evolutionary diversity. For major focus of his work was on species of Philopotami­ example, since Trichoptera are often used in biomonitor­ dae in the subfamily Philopotaminae. Most species of ing programs (in an effort to monitor water quality), and Chimarra were yet to be described. Nevertheless, his dis­ identifications of taxa are usually made only to the genus cussion of character evolution in the genus has continued level, the lumping of diverse lineages into a single genus to be of value. Ross recognized various lineages within diminishes the resolution of these efforts (Dohet 2002; Chimarra, but synonymized all previous genus-group Resh & Unzicker 1975). Members of several distinctive taxa in Chimarrinae within the genus Chimarra, except lineages of Chimarra often co-occur in the same area and for several species considered to represent a distinct thus the broad definition of the genus and in our opinion, lineage, which he included in the genus Protarra Ross, failure to formally recognize lower taxonomic groups, 1956, now considered a synonym of Chimarrhodella underestimates taxonomic and ecological diversity. Lestage, 1925. The genus Chimarrhodella has subse­ Historically, large assemblages comparable to the ge­ quently been revised (Blahnik & Holzenthal 1992), and nus Chimarra were often split into smaller genera, based its sister taxon relationship to Chimarra confirmed. All on distinctive characters shared by subsets of the taxa. other New World species were retained in the subgenus

346 ARTHROPOD SYSTEMATICS & PHYLOGENY — 72 (3) 2014

Chimarra. Following the work of Ross, the subgeneric website (Ratnasingham & Hebert 2007), representing name of Curgia has continued to be used for a distinctive 205 species for a fragment of mitochondrial cytochrome group of New World taxa. The name originally applied to c oxidase gene, subunit I (COI, the animal “barcode” a single Antillean species, Curgia braconoides Walker, fragment). We wished to explore the utility of the bar­ 1860, and was synonymized under Chimarra by Ulmer code data for establishing initial phylogenetic hypotheses (1905). Curgia was subsequently resurrected as a subge­ for large genera, such as Chimarra. It has long been un­ neric name by Milne (1936), and modern workers have derstood that single gene phylogenies are subject to er­ continued the usage. The subgenus was formally revised ror due to “gene tree/species tree” conflicts A( vise 1989) by Flint (1998), who recognized some 16 species groups and potential introgression from hybridization. The COI within Curgia, widespread over Central and South Amer­ has been criticized as being overly homoplastic for deep icas, and also extending into both the Greater and Lesser phylogenetic relationships (Kjer et al. 2001). Accepting Antilles and into the southwestern part of the United all these limitations, we would like to know whether or States. The name Chimarrhafra Lestage, 1936 has also not large-scale initial Trichoptera phylogenies generated had some continued usage for some African taxa, either from the huge amount of barcode data being generated as a genus name (e.g., Jacquemart 1966) or as a subge­ are as “useless” as they are sometimes assumed to be. nus name (Morse 1974). Blahnik (1998) reduced Chi­ Even though “useless” is a subjective definition, we are marrhafra to a synonym of Chimarra (Chimarra) when qualified to discuss the utility of a barcode-generated treating New World species in the nominotypic subge­ phylogeny, because one of us (RB) has specialized on nus. Blahnik’s work also resulted in the recognition of 2 Chimarra and we find his discussion of the issue to be additional New World endemic subgenera, both created “useful”. from taxa originally placed in the subgenus Chimarra. Considerable effort has been extended to finding ap­ All of the 4 currently recognized subgenera of Chi­ propriate phylogenetic markers for Trichoptera. Kjer marra (Chimarra, Curgia, Chimarrita, and Otarrha) et al. (2001) concluded that the rRNA was reliable for are present in the New World and the entire New World the deepest nodes across the entire order, while the COI fauna has been the subject of relatively recent revisions was rapidly saturated in all but the most closely related (Lago & Harris 1987; Blahnik 1997; Blahnik 1998; taxa. Rapid substitution rates are actually ideal for “spe­ Flint 1998; Blahnik 2002). New World species in Chi­ cies barcoding”, as species identification from molecular marra (Chimarra) were placed in 19 species groups, markers requires variation, even among different popu­ about half of them including only 1 or 2 species. Rela­ lations of the same species. Zhou et al. (2007) took ad­ tionships among recognized species groups and subgen­ vantage of the properties of these individual markers in era of Chimarra remained unresolved. Species retained recommending that a combination of COI and the D2 in the subgenus Chimarra, both New World and Old region of the large subunit nuclear rRNA (28S) would World, were hypothesized to reflect a monophyletic as­ be ideal for larval associations. Associating larvae with semblage (Blahnik 1998). All Old World species are known adults requires that selected markers can each currently placed in the subgenus Chimarra. However, be used to generate a gene tree within a genus. Mad- Blahnik (1998) recognized that this might not be a per­ dison (2012) noted that the D2 region of rRNA traced manent solution, and that the subgenus Chimarra might Bembidion (Coleoptera, Carabidae) species better than eventually be split into additional subgenera to reflect the the barcode fragment, likely because as a member of a considerable diversity among Old World lineages. More multigene family, nuclear rRNA is homogenized with recently, Blahnik et al. (2012) recognized 4 distinctive gene flow. We have noticed that the D2 region of rRNA species groups in describing species of Chimarra from works very well for distinguishing Trichoptera species Vietnam. Of these, only the tsudai group, including about (Zhou et al. 2007; Geraci et al. 2010), but this obser­ half of the Asian species, is well characterized (Blahnik vation may not apply to all insect groups. With this et al. 2009). New World species of Chimarra (Chimarra) paper, we examine whether a combination of COI and belong to the digitata group, a lineage also well repre­ rRNA can produce a reliable species-level phylogeny for sented in the fauna from Vietnam, and considered to be Trichoptera by evaluating gene trees from both markers closely related to the type species for the genus. Part of for congruence with the combined data as well as for the thrust of this work is to establish the relationships congruence with species groups and subgenera previous­ among the recognized subgenera, and to provide infor­ ly established on a morphological basis. Since measures mation relevant to the establishing of additional subgen­ like bootstrap values cannot differentiate between gene era for Old World lineages currently placed in the subge­ histories and species histories, we assessed the utility of nus Chimarra. barcode generated phylogenies through congruence with phylogenies generated from an independent molecular dataset (28S), and compared the barcode phylogeny to a 1.3. Utility of DNA barcode sequences phylogeny from combined data. Chimarra has also been for phylogenetics the subject of a great deal of recent morphological work, so one could also assess the utility of the barcode data For Chimarra, in June, 2013, 1171 sequences were avail­ by mapping morphological apomorphies onto barcode- able to us from the Barcode of Life Data Systems (BOLD) generated phylogenies.

347 Chimarrhodella pilcopata 98 97 Chimarrhodella peruviana 92 Chimarrhodella peruviana 45 Chimarrhodella nigra Chimarrhodella ulmeri C fuscipes C neboissi Chimarra100 95 Chimarrhodella pilcopata Chimarrhodella nigra 98 C adamsae 24 1 Chimarrhodella peruviana C desirae 61 C angustipennis 16 36 Chimarrhodella ulmeri 0 Chimarrhodella35 peruviana C cf. limon C megara 100 C ambulans 4 100 25 C spinifera C ambulans C tsudai 80 C monorum 28 C lannaensis 100 C akkaorum 0 C oreithyia C akkaorum 0 100 9 C joliveti C augusta 31 C suadulla34 C protuberans 2 100 C bimbltona C rhamphodes 0 C pipake 100 C socia 68 C chiangmaiensis C socia 19C neboissi C chiangmaiensis 40 10 C marginata 100 C uranka 0 8 33 C ambulans40 C oreithyia C ambulans C suadulla 27 78 98 4 C fuscipes 67 C spinifera C uranka C megara 100 28 C socia 29 C tsudai 0 11 C socia Chimarra54 C joliveti 76 C aterrima C lannaensis 76 C feria C duckworthi 39 C augusta56 Kjer et al.: Barcode data and Chimarra phylogenetics 31 48C angustipennis 48 C calori 100 0 C limon C platyrhina 60C protuberans25 C aterrima 0 24 C rhamphodes C feria 26 54 C flinti 0 C de11sirae C marginata 30 C adamsae C flinti3 C poolei 7 C sp 1 BR45 C pipake 15 C poolei C bimbltona 100 6 C duckworthiChi marrhodellaC (Otarrha) pilcopat aredonda 2. Materials and methods 38 C platyrhina Chimarrhodella nigraC scopuloides 18 24 24 100C monorum61 Chimarrhodella peruviana C (Chimarrita) rosalesi 77 53 C akkaorum36 ChimarrhodellaC beckeri ulmeri “Curgia” 30 79 C akkaorumChimarrhodella peruvianaC barinita 63 C megara C cipoensis 100 C rosalesi 100 25 4 100 C camella C conica C spinifera 13 C tsudai 3 C kontilos Chimarrita28 C straminea C maldonadoi C lannaensisC texana Molecular data consisted of the COI barcode fragment, 7418 0 “Chimarrita” 47 C odonta70 9 C oreiCthyia aureopunctata 92 100 C jolivetiC barrettae 80 C tachuela 31 89 30 C redonda Otarrha C suadullaC boraceia and approximately 1000 nucleotides of 28S rRNA, span­ C puertoricensis 100 C bimbltonaC albomaculata 3 1 93 2859 C rossi C pipake C distermina ning the D1 – D3 hyper-variable regions. The COI data 73 C patosa 68 CC chiangmaiensis (Otarrha) patos a 3 C neboissi C usitatissima 59 C usitatissima 40 10 C marginata 98 C 5boraceia0 100 C (Chimarrita) kontilos were generated at the Biodiversity Institute of Ontario, 3 55 C beckeri 33 C ambulans C (Chimarrita) camella “Otarrha” C distermina C ambulans 7 99 27C fuscipes C maldonadoi University of Guelph, Canada, for the barcode initiative, 10 C barinita 4 C (Otarrha) puertoricensis 1 20 36 C straminea C uranka C (Otarrha) odonta 100 29 100C socia 57 C cipoensis 11 C (Otarrha) rossi and those sequences were downloaded from the BOLD C conica C socia ChimarraC (Otarrha) tachuela 20 C albomaculata 76 C aterrima 26 69 76 C feria 82 C peytoni C aureopunctata 100 C peytoni website (http://www.boldsystems.org/). We pruned the 24 C barrettae 39 C augusta 38 31 48C angustipennis 38 C immaculata 10408 C texana C immaculata 2 75C peytoni C limon COI data by eliminating fragments that were flagged in 53 C mycterophora60C protuberans 100 C peytoni 100 C peruviana24 C rhamphodes 41 C immaculata C26 peruviana54 BOLD as contaminants, and included only fragments 19 21 C immaculata C desirae C cultellata 100 C30 piliferosaC adams ae 21 C sp 7 C piliferosaC flinti that were greater than 350 nucleotides long. Some of 16 20 98 7 CC sp teresae 1 BR 37 C parana Curgia C parana33 15 C poolei C sp 4 BR R 2428 6 C duckworthi 34 C brasiliana 59 C sp 7 BR R 2436 the taxa had sequences that were identical to other taxa; 35 69 38 C platyrhina C cultellata C peruviana 64 100 C peruviana 24 C monorum 95 C brasiliana 17 C akkaorum 99 C parana these duplicate sequences were eliminated in order to 75 C sp 4 BR R 2428 79 0.1 C teresae C akkaorum C parana 16 C scopuloides 100 C rosalesi reduce computation time. The nuclear rRNA sequences 100 35 C mycterophora C camella Chimarrita 38 C piliferosa C kontilos 100 C piliferosa C maldonadoi were generated from these same individuals, using DNA 74 C odonta 47 92 0.1 80 C tachuela left over from COI barcoding. Standard PCR methods 89 C redonda Otarrha C puertoricensis 93 59 C rossi were used, except that we included 400 mM Betaine 73 C patosa C usitatissima 98 C boraceia in the PCR reaction mix. Primers for the 28S fragment 55 C beckeri C distermina were D1-3F CGAGTAGCGGCGAGCGAAACGGGA 99 C barinita 20 36 C straminea 100 C cipoensis and D1-3shortR CGTGYRCGCTCTCAGTGCGT. An­ 57 C conica C albomaculata 26 69C aureopunctata nealing temperature was 55°C. Sequences are available 24 C barrettae 38 C texana in GenBank, under accession numbers KM189833 – 48 75C peytoni 100 C peytoni C immaculata KM189911. 21 41 C immaculata 21 C cultellata The alignment of the COI sequences was trivial, as 20 C sp 7 37 C parana Curgia C parana there were no insertions or deletions among translated 34 C brasiliana 35 69C peruviana C peruviana 17 amino acids. Ribosomal data were aligned by eye accord­ 75 C sp 4 BR R 2428 C teresae jer 16 C scopuloides ing to the structural protocols described in detail in K 35 C mycterophora 38 C piliferosa et al. (2009). Alignments are available on Kjer’s web­ 100 C piliferosa site (http://rci.rutgers.edu/~insects/kjer.htm). Nucleotide 0.1 data were analyzed with likelihood, using the program Fig. 1. Chimarra phylogeny generated from the ribosomal RNA RaxML (Stamatakis 2006), under the – f a option with data (28S rRNA, D1 – D3) for 79 taxa, analyzed with RaxML. Nu­ 100 rapid bootstrap searches. Partitions of the data were merals represent bootstrap support. established through a modification of a site-specific rate partitioning scheme, first described in Kjer et al. (2001), and elaborated upon in Kjer & Honeycutt (2007). The 3. Results and discussion nucleotides were binned into 5 partitions according to their estimated substitution rates (rather than by gene or codon positions). 3.1. Phylogeny Sampling strategy for the rRNA was not entirely sys­ tematic; first, we sequenced all of the species we could Figure 3 representing the analysis of the combined dataset with the taxa, time and funds we had available and then shows that each of the subgenera, Chimarra, Chimarrita, made sure that all subgenera were represented, favoring Otarrha, and Curgia is monophyletic. In comparing the taxa of phylogenetic ambiguity (such as C. maldonadoi COI and rRNA trees (Figs. 1 and 2, respectively), it is and C. usitatissima). Since there were more COI sequenc­ immediately apparent that the nuclear rRNA has shorter es (750 unique haplotypes) than rRNA sequences (79), branch lengths at every level. Of 1107 rRNA characters, we had to devise a strategy for combining data. We ana­ only 348 are parsimony informative (310 within Chim­ lyzed data from separate genes, as well as from combined arra), compared to 280 parsimony informative charac­ data. Two analyses of the COI were completed: one with ters out of 654 for the COI (272 within Chimarra). Thus all the COI haplotypes, and another including only spe­ the datasets are close to the same size. The difference in cies for which nuclear rRNA also existed, so that phylo­ ­ branch lengths is due to an elevated substitution rate in genies could be directly compared without the influence the COI, relative to the slow rate in the rRNA. Further of taxon sampling. Therefore, analyses consisted of all demonstration of this comes from comparing the nodes rRNA (79 taxa; Fig. 1), 79 COIs (Fig. 2), combined data that each gene tree shares with the combined data tree. (79 taxa; Fig. 3) and 750 COIs (Fig. ES1 1). The rRNA data tree (Fig. 1) shares many nodes with the combined data tree (Fig. 3), including those at the deep­ est levels of the tree. This is in stark contrast with the 1 ES = Electronic Supplement, files listed at end of article. distribution of congruence between the COI tree (Fig. 2)

348 ARTHROPOD SYSTEMATICS & PHYLOGENY — 72 (3) 2014

Chimarrhodella pilcopata 98 97 Chimarrhodella peruviana 92 Chimarrhodella peruviana 45 Chimarrhodella nigra Chimarrhodella ulmeri C fuscipes Chimarra C neboissi 95 98 C adamsae 1 C desirae 16 C angustipennis 0 35 C cf. limon 100 C ambulans 4 C ambulans 80 C monorum 100 C akkaorum C akkaorum 0 C augusta 34 C protuberans 2 C rhamphodes 0 100 C socia C socia 19 C chiangmaiensis C uranka 0 8 40 C oreithyia C suadulla 98 78 67 C spinifera 28 C megara 29 C tsudai 0 54 C joliveti C lannaensis 56 C duckworthi 48 C calori 0 C platyrhina 25 C aterrima C feria 0 C flinti 0 11 C marginata 3 C poolei 45 C pipake C bimbltona C (Otarrha) redonda 18 C scopuloides C (Chimarrita) rosalesi 77 53 C beckeri “Curgia” 30 C barinita 63 C cipoensis 4 C conica 13 3 C straminea 18 C texana 70 C aureopunctata “Chimarrita” C barrettae 30 C boraceia C albomaculata 3 1 28 C distermina C (Otarrha) patosa 3 59 C usitatissima 50 C (Chimarrita) kontilos 3 C (Chimarrita) camella “Otarrha” 7 C maldonadoi 10 C (Otarrha) puertoricensis 1 29 C (Otarrha) odonta C (Otarrha) rossi C (Otarrha) tachuela 20 82 C peytoni 100 C peytoni 38 C immaculata 2 C immaculata 53 C mycterophora 100 C peruviana 19 C peruviana 100 C piliferosa C piliferosa 16 98 C teresae 33 C sp 4 BR R 2428 59 C sp 7 BR R 2436 64 C cultellata 95 C brasiliana 99 C parana 0.1 C parana

Fig. 2. Chimarra phylogeny generated from COI for 79 taxa, analyzed with RaxML. Numerals represent bootstrap support. and the combined data, which is concentrated at the tips. ality from error. Homoplasy that is particularly high Yet the COI does recover the deep ingroup node, as well among silent codon sites in the barcode fragment (Kjer as the Chimarra (Chimarra) node, and the node that sup­ et al. 2001) makes the recovery of the actual gene tree ports the 3 entirely New World subgenera. We conclude extremely difficult. If it is nearly impossible to recover that lack of congruence is stochastic; each strongly sup­ “the gene tree” from a single gene, then it is also nearly ported node from either marker (Figs. 1 and 2) is also impossible to evaluate gene tree/species tree conflicts. In found in the combined data, and weakly supported nodes this study, we have a number of means to assess gene from the COI are overturned by even a small number of performance and the influence of adding taxa, including rRNA characters. When we examine nodes shared with bootstrap values, congruence with the rRNA, recovery the combined data in both the rRNA tree, and the COI of morphologically defined species groups, and logical tree, bootstrap support increases in the combined data, geographic clusters. We find that adding taxa for the bar­ indicating that the other gene was not strongly conflict­ code fragment (Fig. ES1) helped with resolution in many ing, but supportive of the results from the combined data cases. For example, while the COI analyzed in the small even when the gene did not support a particular relation­ taxon set shows Otarrha scattered within Curgia (Fig. 2), ship by itself. both the combined data (Fig. 3) and the larger COI taxon Not surprisingly, we find that adding another marker set (Fig. ES1) recover Otarrha as monophyletic. Many improves congruence with previously proposed species of the previously proposed species groups were also re­ groups. Another long-established method to improve covered, although the immaculata, laguna, and banksi phylogenetic accuracy is to add more taxa. The question groups, which all have brustiate appendages on segment of whether barcode data can provide useful phylogenies VII, were not recovered together in the barcode tree (Fig. depends on one’s definition of “useful”. We find it trou­ ES1). A particularly good example of how fundamentally bling that it is impossible to assess congruence from a different the backbone tree from barcode sequences can single marker, and therefore, difficult to distinguish re­ be is given by the primula species group (Fig. ES1). The

349 Kjer et al.: Barcode data and Chimarra phylogenetics

Species groups 100 Chimarrhodella pilcopata 98 Chimarrhodella nigra 54 Chimarrhodella ulmeri peruviana 94 Chimarrhodella peruviana Chimarrhodella peruviana C megara 100 C oreithyia 35 47 C suadulla C joliveti tsudai Chimarra 22 C lannaensis 100 31 56 C tsudai C spinifera 100 C pipake minuta C bimbltona 77 C chiangmaiensis 14 C neboissi 16 C marginata 47 100 C ambulans Old world C ambulans 36 46 C fuscipes C uranka 50 C cf.limon 13 C angustipennis 100 C monorum 100 C akkaorum 22 15 C akkaorum 100 C socia

68 C socia digitata 100 C aterrima 88 65 15 C augusta aterrima C feria C flinti C poolei “poolei” both 64 55 98 C platyrhina “ortiziana” 69 C calori 25 C duckworthi 100 C adamsae “poolei” COI only 52 C desirae 96 C rhamphodes bidentata Chimarrita C protuberans 100 C rosalesi 100 C camella simpli cforma RNA only C kontilos C usitatissima 33 C maldonadoi 76 C odonta 73 98 C tachuela 94 71 C rossi 70 C patosa Otarrha 73 C puertoricensis C redonda 98 35 C distermina 97 C beckeri “morio” 26 C boraceia 44 C barinita C straminea 48 99 C cipoensis “morio” Curgia C conica 98 84 C texana C aureopunctata “banksi” 28 C barrettae 59 C immaculata 100 C immaculata 34 C peytoni immaculata 17 68 C peytoni C albomaculata C sp 7 BR R 2436 74 85 12 C cultellata 100 C brasiliana C parana 33 100 C parana 100 C teresae C sp 4 BR R 2428 “banksi” 17 89 C mycterophora 100 C peruviana 41 C peruviana C scopuloides 31 100 C piliferosa C piliferosa 0.1

Fig. 3. Chimarra phylogeny generated from combined rRNA and COI data. Nodes marked with open circles are present in the rRNA tree. Nodes marked with grey dots are present in the COI tree. Nodes marked with black dots are present in both COI and rRNA trees. Old world taxa are boxed in grey. Inset: dorsal illustration of a female Curgia by Dan Hanson. primula group is polyphyletic in the large barcode tree However, the highest bootstrap support for any node se­ (Fig. ES1), arising from distant regions of the big tree, parating genera in the primula group in the barcode tree but their neighbors, C. marginata and C. ambulans form is 4 (Fig. ES1). Since we advise collapsing nodes that are a monophyletic group in Fig. 3. If the combined data are so weakly supported by bootstrap as to be essentially sto­ better indicators of phylogeny, then the polyphyly of the chastic, we do not see that the barcode tree is in conflict. primula species group undermines a huge portion of the Using appropriate caution in evaluating branch support, barcode tree. Of course, if the “more taxa provides better we find that a dense taxon sample of the barcode fragment results” is true, then we mistrust Fig. 3. We do not wish provides some information, but much of this information to rehash the “more taxa vs. more genes” debate here, is confined to the tips of the tree, and indicated by high because we have always felt that both are a good thing. bootstrap support. We also note that some of the congru­

350 ARTHROPOD SYSTEMATICS & PHYLOGENY — 72 (3) 2014

ent nodes, such as the three deepest nodes in Chimarra 3.2. Taxonomic implications (Fig. 3) are also recovered by the COI alone. We suspect that there may be some pattern here, with non-silent 1st Our phylogenetic results indicate that the previously de­ and 2nd codon positions providing reliable characters for fined subgeneric infrastructure for New World taxa is the deepest nodes, and silent 1st and 3rd codon positions mostly satisfactory, with 2 exceptions. resolving the tips, while fouling intermediate nodes. We (1) One lineage placed in the subgenus Chimarrita, have not performed any real analysis to confirm this sus­ the C. maldonadoi group (Blahnik 2002) appears closer picion, but have seen it frequently enough in our work to to the subgenus Otarrha (Fig. 3). The C. maldonadoi suggest it as a possibility for further evaluation. group was only speculatively placed in the subgenus The rRNA offers several features that are similar to Chimarrita in the first place and thus molecular data morphological characters that can be visualized in the indicating a different position is not surprising. Only 2 alignment available in the supplementary materials and extant and obviously closely related species belong here, online (Fig. ES2). The grouping of Chimarrita with both from the Greater Antilles (Puerto Rico and Hispan­ Otarrha and Curgia, along with C. maldonadoi Flint, iola). Barcode sequences taken from individuals from 1964 and the incertae sedis taxon C. usitatissima Flint, opposite ends of Puerto Rico that were both originally 1971 is supported by the loss of a hairpin stem loop identified as C. maldonadoi provide another example of (stem-loop 30, Fig. ES2), and 4 unique nucleotides in the how the COI data can point to further research hypo­ place of this missing stem that are clearly apomorphic. theses; their barcodes appeared so divergent (14% un­ Stem-loop 30 is present in Chimarrhodella and all Chi­ corrected pairwise difference) that the possibility that marra (Chimarra), and also present in Chimarra n.sp. E, they were different species was raised. Although we do our only representative of the C. georgensis group (“Chi­ not support the definition of species based on barcode di­ marrhafra”) from Africa. Most of the data from this spe­ vergence alone (Flint & Kjer 2011), subsequent exami­ cies were missing, so it was not included in the analysis, nation of the genitalia revealed some morphological dif­ but the presence of stem loop 30 in Chimarra n.sp. E ferences (Flint, pers. comm.) that leads us to believe that indicates that it belongs with the Chimarra (Chimar­ BOLD specimen 10OFCAD-307 is an additional cryptic ra) clade, or at least outside the exclusively New World species, yet to be named. Additionally, it appears that subgenera. This same pattern is also supported by a 4 bp all 6 of the species from Dominican amber described by loss, just downstream of D2-1a, but C. pipake Malicky & Wichard (1983a,b, 2007) also belong here. They were Chantaramongkol, 1993 and C. bimbltona Malicky, 1979 placed in the subgenus Chimarrita by Wichard (2007) (representing the Chimarra (Chimarra) minuta group of primarily on the basis of characters used by Blahnik to Blahnik et al. 2012) also lack these 4 nucleotides. We define the C. maldonadoi group, and not the more nu­ also find it interesting that the morphological outliers, merous characters used to define other species of Chi­ C. usitatissima and C. maldonadoi have highly autapo­ marra (Chimarrita). Unfortunately, a number of these morphic rRNAs (Fig. ES2). characters are probably plesiomorphic, and thus the pos­ Figure ES3 shows the geographic distribution of Chi­ sibility that the fossil species are thereby assigned to a marra used in this study and was generated automati­ paraphyletic assemblage cannot be eliminated. It is clear cally on the barcode database (BOLD). The geographic that they do not belong within either the subgenera Cur­ data on this database can be explored in greater detail gia or Otarrha, as currently defined, which represent the on “Google Earth”. By downloading the keyhole markup dominant elements in the modern fauna of the Greater language (.kml) file on either the BOLD or Kjer website, Antilles (8 and 11 species, respectively). The somewhat and opening this file in the Google Earth application, lo­ unusual female genitalia of species in the C. maldonadoi cality and voucher information can be viewed in detail, group might be of some help in resolving this, if this frequently with images of the individual specimens used. also characterized the fossil species, but no females of Thus the supplementary materials for this paper are sub­ fossil species have yet been described. Since the subgen­ stantial, but could not be presented in print without an era Curgia and Otarrha are not represented in the fossil additional 6 pages of phylograms (Fig. ES1), two pages fauna, the biogeographic implication is that the extant of aligned rRNA data (Fig. ES2), and countless pages of species now found there are likely derived from more re­ images and locality data (the .kml file). Many morpholo­ cent immigrants to an ancestral fauna, thus contradicting gists do not relate to the morphological features of nu­ some of the conclusions of Blahnik (1997, 2002), and cleic acids, but the structural features of rRNA are clear­ making the retention of relict species from an ancestral ly visible in Fig. ES2. The COI tree can be updated by biota even more significant. anyone using the BOLD website by downloading these (2) The other taxon that does not clearly fall in one sequences, as more taxa are added to the database. And of the subgenera is C. usitatissima, which has a sister while it is difficult (and dull) to read tables of collec­ species, C. angularis Blahnik, 2002. These 2 species are tion data in print, it can be enjoyable to “spin the globe” currently unplaced to subgenus. The unusual aspects of on Google Earth, and see patterns of distribution, right their morphology were noted by Blahnik (2002), who down to the bend in the river where individuals on our suggested they might have their closest affinity with or in phylogenies were collected. These are exciting times for the subgenus Curgia. With our phylogenetic results (Fig. presenting phylogenies. 3), this seems to be the case.

351 Kjer et al.: Barcode data and Chimarra phylogenetics

However, the exact position of neither C. usitatis­ 4. Conclusions sima nor C. maldonadoi is well supported in the current analysis. Both taxa appear to be relatively isolated and not embedded in the defined subgenera. Treating them as Phylogenies do not need to be perfect to be useful. How­ additional subgenera would be a possibility, but we de­ ever, we find the COI data alone fails to establish the cided that it was premature before their relationships are monophyly of morphologically defined subgenera that strongly supported and the merits of alternate taxonomic were corroborated with combined molecular data. There arrangements considered. It is clear, however, that the is little doubt that some phylogenetic information can present placement of the C. maldonadoi group in Chi­ be obtained from the barcode data, and it is likely that mar­ra (Chimarrita) is unsupported. As a conservative clades shown in Fig. 2 that are supported by high boot­ treatment, consistent with analysis presented, we propose strap values are reliable, at least as a first hypothesis. A that all of the taxa now placed in the C. maldonadoi group reader capable of evaluating bootstrap support, mentally of Chimarra (Chimarrita), including the 6 fossil taxa, be collapsing nodes below some threshold, would find only moved to a position of incertae sedis to subgenus within information (not error) from the barcode sequences. The Chimarra, and that C. usitatissima and C. angularis also COI does recover Chimarra (Chimarra) as monophyl­ retain the designation of incertae sedis. etic in both taxon sets, and many of the groupings make The strong support of monophyly of Chimarra (Chi­ geographic sense. Even with bootstrap support at less marra) is something of a surprise, based on the consid­ than 10%, we see clades from the 750 taxon COI dataset erable morphological diversity within the subgenus and (Fig. ES1) that are entirely reasonable. Many of the spe­ relatively weak morphological character evidence unit­ cies groups proposed by Blahnik and Flint are also re­ ing the entire clade (Blahnik 1997, 1998). In general, covered from the analysis of the larger taxon set for COI. the relationships within the subgenus are consistent with On the other hand, it is impossible to distinguish “real” the major groups currently proposed. Of particular in­ weakly supported groupings from false ones. Anybody terest is the clear separation of members of the tsudai working on Chimarra would find the COI hypotheses to group from the other sampled taxa, and the position of be useful, even if only to generate hypotheses to test with species in the minuta group as sister to remaining old more reliable data. However, this work should not be cit­ world Chimarra, including the marginata group (includ­ ed as finding that “the barcode fragment alone provides ing the digitata group of Blahnik et al. 2009, 2012). Un­ reliable phylogenies” as this is far from our conclusion. fortunately, no representatives of the georgensis group We find that the addition of a single PCR amplicon from were included in the combined analysis. The georgen­ nuclear rRNA (D1 – 3) provides enough data for the sis group was considered by Ross (1956) to be the most production of a reasonable phylogeny, as assessed by “primitive” lineage among Old World Chimarra and this bootstrap values and congruence with morphology and was also the opinion of Blahnik (1997). Ross placed geography. members of the georgensis group in Chimarrhafra, and With new developments in sequencing technolo­ also considered the Philippine genus Vigarrha Navás gy, there has been a shift of focus and attention to­ 1921, to be closely related. If they form a natural group, wards genomics – the generation of huge datasets with and given a subgeneric name, the name Vigarrha would millions of nucleotides for a smaller number of taxa. As have priority. Unfortunately, neither of these taxa are these technologies get cheaper, it may be that many more currently well characterized and Vigarrha is monotypic, taxa can be explored. However, there are many impor­ based on a female specimen. Most of the species of the tant evolutionary questions to be answered, particularly georgensis group are found in Africa, but a species in in alpha taxonomy and generic revisions, that may re­ the group was recently reported from Vietnam (Blah- quire data from hundreds or thousands of individual nik et al. 2012). Additional taxa with primitive features specimens. Taxonomic studies are essential in order to are also known and were discussed by Blahnik et al. understand the larger scale patterns of species evolution, (2009), including Chimarra noohi Blahnik, et al. 2009, and form a critical foundation for any genomic and phy­ C. furti Mey, 1998, Edidiehlia hiskia Malicky, 1993, and logenomic studies in the future. Organismal systematists Chimarra uvana Kimmins, 1957. There are undoubt­ form the link between our understanding of a species edly others; species descriptions often lack the details morphology (phenotype) and its DNA (genotype). We to make assessments about relationships. The relation­ show that these questions can be addressed using a much ships of these taxa need to be considered before ad­ less expensive, and simpler approach: reciprocal illumi­ ditional subgenera can be created. Despite this lack of nation from a combination of two markers and morpho­ complete sampling in the current analysis, it appears that logical data. Museum specimens exist for all described the majority of species of Chimarra from Africa, Asia, species, and are available for morphological work. We Australia, North and South America fall within a defined already have barcode data from over 45,000 individual lineage, which includes Chimarra marginata, the type Trichoptera, representing a significant proportion of the species for the genus. This core of species would likely world’s commonly encountered species. We conclude be retained in the nominate subgenus, should additional that a combination of nuclear rRNA and COI data pro­ subgenera be created. vide a simple and inexpensive phylogeny for trichopteran

352 ARTHROPOD SYSTEMATICS & PHYLOGENY — 72 (3) 2014

congeners. Each marker complements the other, and can Blahnik R.J., Arefina-Armigage T.I., Armitage B.J. 2012. The ge­ quickly provide corroborative evidence for the mono­ nus Chimarra Stephens (Trichoptera: Philopotamidae) in Viet­ phyly of morphologically derived species groups. nam. – Insecta Mundi 0229: 1 – 25. Blahnik R.J., Holzenthal R.W. 1992. Revision of the Neotropi­ cal genus Chimarrhodella Lestage (Trichoptera: Philopotami­ dae). – Systematic Entomology 17: 109 – 132. 5. Addendum Blahnik R.J., Holzenthal R.W., Huisman J. 2009. Chimarra of Sa­ bah and Sarawak, northern Borneo (Trichoptera: Philopotami­ dae). – Tijdschrift voor Entomologie 152: 109 – 166. During final revisions of our paper, Wahlberg and Jo­ Dohet A. 2002. Are caddisflies an ideal group for the biological as­ hanson generously provided us with a preview of their sessment of water quality in streams? – Nova Supplementa En­ paper on Chimarra (Wahlberg & Johanson 2014). This tomologica (Proceedings of the 10th International Symposium paper used molecular data from mitochondrial COI, nu­ on Trichoptera) 15: 507 – 520. clear cadherin-like gene (CAD), and RNA polymerase Flint O.F. Jr. 1998. Studies of Neotropical Caddisflies, LIII: A ta­ II (Pol-II) in order to infer a phylogeny of Chimarra, xonomic revision of the subgenus Curgia of the genus Chimar­ and to estimate the age and radiation of the genus. Their ra (Trichoptera: Philopotamidae). – Smithsonian Contributions phylogenetic results are similar to ours in that the new to Zoology 594: v + 1 – 131. world subgenera, Chimarrita, Otarrha, and Curgia, Flint O.S., Kjer K.M. 2011. A new species of Neophylax from form a monophyletic sister taxon to Chimarra s.str. Northern Virginia, USA (Trichoptera: Uenoidae). – Proceed­ They also recover taxa included in the Asian tsudai and ings of the Entomological Society of Washington 113: 7 – minuta groups among the first splits among subgenus 13. Chimarra. Geraci C.J., Zhou X., Morse J.C., Kjer K.M. 2010. Defining the genus Hydropsyche (Trichoptera: Hydropsychidae) based on DNA and morphological evidence. – Journal of the North American Benthological Society 29: 918 – 933. 6. Acknowledgments Hennig W. 1950. Grundzüge einer Theorie der Phylogenetischen Systematik. – Deutscher Zentralverlag, Berlin. Hennig W. 1966. Phylogenetic Systematics. – Translated by D. Da­ We thank Hans Malicky, Oliver Flint Jr. and Ralph Holzenthal for vis & R. Zangerl, Urbana: University of Illinois Press. collecting and sharing their extensive museum resources. Thanks to Jacquemart S. 1966. Trichoptera. Parc National de la Garamba. – Paul Hebert of the Biodiversity Institute of Ontario and the Canadi­ Mission H. de Saeger 51: 35 – 56. an Centre for DNA Barcoding for the barcode sequencing. Thanks Kimmins D.E. 1957. Entomological results from the Swedish expe­ to Emma Wahlberg and Kjell-Arne Johanson for a preview of their dition 1934 to Burma and British India. Trichoptera. The genus work. Additional specimens were collected by Lourdes Chamorro, Chimarra Stephens (Fam. Philopotamidae). – Arkiv för Zoo­ Atilano Contreras-Ramos, Marianne Espeland, C.J. Geraci, Dave logi 11: 53 – 75. Houghton, Jolanda Huisman, John Morse, Fernando Munoz, Hen­ Kjer K.M. 1995. Use of rRNA secondary structure in phylogenetic ricke Paprocki, Steffen Pauls, Aysha Prather, Andy Rasmussen, studies to identify homologous positions: an example of align­ Desi Robertson, Dave Ruiter, Michael Shackleton, Ian Stocks and ment and data presentation from the frogs. – Molecular Phylo­ others. Dr. K. Klass was extremely helpful as editor, and we thank genetics and Evolution 4: 314 – 330. two anonymous reviewers for comments that greatly improved the Kjer K.M., Blahnik R.J., Holzenthal R.W. 2001. Phylogeny of manuscript. We thank NSF DEB 0816865 for financial support. Trichoptera (caddisflies): Characterization of signal and noise within multiple datasets. – Systematic Biology 50: 781 – 816. Kjer K.M., Honeycutt R.L. 2007. Site specific rates of mitochon­ drial genomes and the phylogeny of Eutheria. – BMC-Evolu­ 7. References tionary Biology 2007, 7: 8 Kjer K.M., Roshan U., Gillespie J.G. 2009. Structural and evolu­ tionary considerations for multiple sequence alignment of Avise J.C. 1989. Gene trees and organismal histories, a phylogenet­ RNA, and the challenges for algorithms that ignore them. Pp. ic approach to population biology. – Evolution 43: 1192 – 1208. 105 – 149 in: Rosenberg M. (ed.), Perspectives on Biological Blahnik R.J. 1997. Systematics of Chimarrita, a new subgenus of Sequence Alignment: Methods, Models, Concepts and Strate­ Chimarra (Trichoptera: Philopotamidae). – Systematic Ento­ gies. – University of California Press. mology 22: 199 – 243. Lago P.K., Harris S.C. 1987. The Chimarra (Trichoptera: Philopo­ Blahnik R.J. 1998. A revision of the Neotropical species of the ge­ tamidae) of eastern North America with descriptions of three nus Chimarra, subgenus Chimarra (Trichoptera: Philopotami­ new species. – Journal of the New York Entomological Society dae). – Memoirs of the American Entomological Institute 59: 95: 226 – 251. v + 1 – 318. Lestage J.A. 1925. Notes trichoptérologiques. 7. – Bulletin et An­ Blahnik R.J. 2002. Systematics of Otarrha, a new Neotropical sub­ nales de la Société Entomologique de Belgique 65: 35 – 44. genus of Chimarra (Trichoptera: Philopotamidae). – System­ Lestage J.A. 1936. Notes trichoptérologique. XIV. Les composan­ ­ atic Entomology 27: 65 – 130. tes de la Faune sud-africaine et la dispersion transafricaine de

353 Kjer et al.: Barcode data and Chimarra phylogenetics

quelques espèces. – Bulletin et Annales de la Société Ento­ Proceedings of the 3rd International Symposium on Tricho­ mologique de Belgique 67: 165 – 192. ptera. – Dr. W. Junk, The Hague, 395 – 407. Maddison D.R. 2012. Phylogeny of Bembidion and related ground Zhou X., Kjer K.M., Morse J.C. 2007. Associating larvae and beetles (Coleoptera: Carabidae: Trechinae: Bembidiini: Bembi­ adults of Chinese Hydropsychidae caddisflies (Insecta: diina). – Molecular Phylogenetics and Evolution 63: 533 – 576. Trichoptera) using DNA sequences. – Journal of the North Malicky H. 1993. Neue asiatische Köcherfliegen (Trichoptera: Rhy­ American Benthological Society 26: 719 – 742. acophilidae, Philopotamidae, Ecnomidae und Polycentropo­ didae). – Entomologische Berichte Luzern 29: 77 – 88. Mey W. 1998. Contribution to the knowledge of the caddisfly fauna of the Philippines, III (Insecta: Trichoptera). – Entomofauna Electronic Supplement File 19: 1 – 32. Milne L.J. 1936. Studies in North American Trichoptera, 3. – Pri­ at http://www.senckenberg.de/arthropod-systematics vately printed, Cambridge, Massachusetts. (“Contents”) Morse J.C. 1974. New caddisflies (Trichoptera) from southern Af­ rica. – Journal of the Kansas Entomological Society 47: 328 – 344. File: kjer&al-chimarraphylogeny-asp2014-electronic­ Morse J.C. 2014. Trichoptera World Checklist, http://www.clem supplement.pdf – Fig. ES1A,B. COI based phylogeny son.edu/cafls/departments/esps/database/trichopt/index.htm. with 750 unique terminals, analyzed with RaxML, in two Navás L. 1921. Neue Trichopteren. – Konowia 1: 37 – 38. parts A and B. Note that some nodes are supported by boot­ Ratnasingham S., Hebert P.D.N. 2007. The Barcode of Life Data strap values of “0”. This is the result of RaxML perform­ System. – Molecular Ecology Notes 7: 355 – 364. ing fast bootstrap searches, followed by a more thorough Resh V.H., Unzicker J.D. 1975. Water quality monitoring and tree search. The tree is presented from the slower search, aquatic organisms: the importance of species identification. – and some of these nodes were not supported in the fast Journal Water Pollution Control Federation, Washington 47: bootstrap search (resulting in zero, or very low values). 9 – 19. This tree is available as a pdf on Kjer’s website (http:// Ross H.H. 1956. Evolution and Classification of the Mountain rci.rutgers.edu/~insects/kjer.htm). The numbered arrows Cad­disflies. – University of Illinois Press, Urbana. represent the order of the taxa as they appear in Fig. 3 Schmid F. 1979. On some new trends in trichopterology. – Bulletin (top to bottom). – Fig. ES2. Alignment of the rRNA, in of the Entomological Society of Canada 11: 48 – 57. the structural notation of Kjer (1995). – Fig. ES3. Geo­ Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based graphic distribution of Chimarra in the BOLD website. phylogenetic analyses with thousands of taxa and mixed mod­ Circles with numerals are placed over the general area els. – Bioinformatics 22: 2688. of the collection localities, which are available in greater Ulmer G. 1905. Über die geographische Verbreitung der Tricho­ detail in the .kml file, which can be generated on BOLD, pteren. – Zeitschrift für Wissenschaftliche Insektenbiologie 1: or downloaded from Kjer’s website. Numerals indicate 15 – 32, 68 – 80, 119 – 126. the number of individuals collected from that particular Wahlberg E., Espeland M., Johanson K.A. 2014. Seven new spe­ region, with colors indicating quantity classes. cies of Chimarra (Trichoptera: Philopotamidae). – Zootaxa 3796: 579 – 593. Wahlberg E., Johanson K.A. 2014. The age, ancestral distribution and radiation of Chimarra (Trichoptera: Philopotamidae) using molecular methods. – Molecular Phylogenetics and Evolution. 79: 433 – 442. Walker F. 1860. Characters of undescribed Neuroptera in the col­ lection of W. W. Saunders Esq. F.R.S., etc. – Transactions of the Entomological Society of London, n. ser. 2, 5: 176 – 199. [now Transactions of the Royal Entomological Society of London] Wichard W. 1983a. Köcherfliegen des Dominikanischen Bern­ steins II. Fossile Arten der Gattung Chimarra. – Mitteilungen der Münchener Entomologischen Gesellschaft 72: 137 – 145. Wichard W. 1983b. Köcherfliegen des Dominikanischen Bern­ steins III. Chimarra succini n. sp. (Stuttgarter Bernsteinsamm­ lung: Trichoptera, Philopotamidae). – Stuttgarter Beiträge zur Naturkunde Serie B (Geologie und Paläontologie) 95: 1 – 8. Wichard W. 2007. Overview and descriptions of caddisflies (Insec­ ta, Trichoptera) in Dominican amber (Miocene). – Stuttgarter Beiträge zur Naturkunde Serie B (Geologie und Paläontologie) 366: 1 – 51. Wiggins G.B. 1981. Considerations on the relevance of immature stages to the systematics of Trichoptera. In: Moretti G.P. (ed.),

354 Fig. ES1A

Chimarrhodella tapanti RB 0781 CR PUNT Chimarrhodella 2 5 Chimarrhodella galeata KK 0026 BOL S Cruz 9 8 Venezuela 100 Chimarrhodella nigra RB 2299 VEN Lara “peruviana” group 2 0 Venezuela Chimarrhodella nigra RB 0777 VEN Lara*** 2 4 0 Chimarrhodella paria RB 0778 VEN Sucre 1 4 Chimarrhodella tobagoensis RB 0782 VEN Sucre 2 1 Bolivia 100 Chimarrhodella pilcopata RB 2408 BOL LaPax *** 1 Chimarrhodella pilcopata RB 2477 BOL La Paz

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persimilis CR LIM simpliciforma OF GUY U De Ber kontilos BRZ S Paulo Chimarrhodella ulmeri RB 2450 BOL La Paz camella BRZ S Paulo camella BRZ R d Jan Venezuela/Bolivia camella BRZ S Paulo camura BRZ R d Jan sp BR BRZ Min Ger camella BRZ S Paulo

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purisca CR S JO pablito CR ALAJ 100 pablito CR ALAJ Columbia/Venezuela/Bolivia 62 pablito COL V d CAU C. Curgia pey banksi CR PUNT toni RB 2286 VEN Lara Curgia banksi OF GUY texana OF US TX texana CSUPOBK US TX texana OF US TX texana CSUPOBK US TX texana MX NL

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beckeri OF GUY boraceia BRZ Min Ger

b oraceia BRZ Min Ger C. Chimarrita simpliciforma 10OF 304 GUY U De Ber boraceia BRZ Min Ger

C. Chimarrita kontilos RB 2460 BRZ S Paulo *** boraceia BRZ Min Ger n. sp BR BRZ Min Ger sp BR BRZ Parana

n. sp BR BRZ S Cat Chimarrita sp BR BRZ Min Ger

n. sp BR BRZ Min Ger

43 n. sp BR BRZ R d Jan 1 5 n. sp BR BRZ S Paulo centrispina BRZ Min Ger

n. sp BR BRZ S Paulo conica BRZ S Paulo

conica BRZ Min Ger Brazil C. Chimarrita camella RB 2455 BRZ S Paulo conica BRZ Min Ger

conica BRZ Min Ger n. sp BR BRZ Min Ger

sp BR BRZ Min Ger 5 3 froehlichi BRZ S Paulo 9 5 froehlichi BRZ R d Jan simpliciforma

C. Chimarrita camella RB 2457 BRZ R d Jan *** froehlichi BRZ R d Jan albomaculata PR

albomaculata OF PR gilvimacula Dre Pedernales

7 5 gilvimacula Dre Pedernales 42 braconoides OF GUY braconoides OF BRZ

C. Chimarrita camella RB 3093 BRZ S Paulo braconoides OF GUY distermina BOL La Paz 8 6 parilis PER M d D patosa BOL La Paz

C. Chimarrita camura RBCAD 2458 BRZ R d Jan patosa BOL La Paz tachuela VEN MER puertoricensis DR PR

puertoricensis PR group phthanorossi COL Choco rossi CR GUAN rossi CR ALAJ r ossi AF

rossi KK CR HER 9 6 C. Chimarrita latiforceps BR RB 2462 BRZ Min Ger sp BR BRZ Min Ger odonta complex BRZ Min Ger 100 nr. odonta BRZ Min Ger odonta complex BRZ S Paulo odonta complex BRZ R d Jan

nr. odonta BRZ S Paulo 9 9 odonta complex BRZ S Cat

C. Chimarrita latiforceps RB 3094 BRZ S Paul o odonta complex BRZ S Cat odonta complex BRZ S Paulo odonta complex BRZ R d Jan odonta complex BRZ R d Jan Chimarrita + Chimarra usistissima odonta BRZ R d Jan 6 4 nr. odonta BRZ S Paulo odonta BRZ R d Jan C. Chimarrita latiforceps BR RB 2461 BRZ S Paulo odonta complex BRZ R d Jan

nr. odonta BRZ R d Jan centralis CR PUNT

centralis CR LIM minca COL MAGD peruviana BOL S Cruz

geranoides COL Cauca C. Chimarrita c.f. maldonadoi 10OF 307 PR piliferosa BOL La Paz teresae BRZ Min Ger Puerto Rica/Brazil teresae BRZ Min Ger sp BR BRZ Parana sp BR BRZ R d Jan sp BR BRZ R d Jan 1 8

sp BR BRZ R d Jan C. Chimarrita maldonadoi KK 0019 PR*** mycterophora BOL La Paz camposae BRZ S Paulo camposae BRZ Min Ger 45 1 4 camposae BRZ Min Ger camposae BRZ Min Ger camposae BRZ Min Ger

C. usitatissima RB 0805 BRZ Min Ger camposae BRZ Min Ger aurivittata group sp BR BRZ Min Ger *** sp BR BRZ Min Ger Guyana brasiliana BRZ S Cat parana BRZ Min Ger Curgia 0 parana BRZ S Cat 44 XZ sp BZ MPBZT BRZ Parana C. Curgia aurivittata 10OF 301 GUY U De Ber XZ sp BZ MPBZT BRZ Parana

brasiliana BRZ S Cat cultellata BRZ Min Ger cultellata BRZ Min Ger

cultellata BRZ Min Ger sp BR BRZ Min Ger C. Curgia spatulata RB 2415 CR GUAN sp BR BRZ Min Ger sp BR BRZ Min Ger Costa Rica/Venezuela sp BR BRZ Min Ger sp A SUP CONG Sud Kivu s p A SUP CONG Sud Kivu

100 100 “banksi” group sp A SUP CONG sp. SUP CONG Sud Kivu C. Curgia didyma RB 2157 VEN ZUL caboverdensis Cve

caboverdensis SUP CONG Sud Kivu 0 uranka DC AUS WA uranka DC AUS WA gvc L AUS QUE uranka AUS QUE

C. Curgia didyma RB 3045 VEN ZUL gvc L AUS QUE gvc L AUS QUE uranka DC AUS QUE

1 8 gvc L AUS QUE gvc L AUS QUE uranka gvc L AUS QUE uranka gvc L AUS QUE

C. Curgia wilsoni RB 2420 CR PUNT gvc L AUS QUE htinorum THAI Costa Rica/Brazil megara BHU Punakha spinifera THAI Mae Hong Son

spinifera THAI Chiang Mai batukaua INDN Nusa Tenggara Bara t 8 3 batukaua INDN Nusa Tenggara Bara t C. Curgia wilsoni RB 2421 CR GUAN batukaua INDN Bali 8 6 batukaua INDN Nusa Tenggara Bara t “mexicana” batukaua INDN Bali

batukaua INDN Bali suadulla THAI Chiang Mai

suadulla THAI Chiang Mai auroni tens IN INDN SULA U T C. Curgia bisectilis 10OF 178 BRZ Min Ger auroni tens IN INDN SULA U T auroni tens IN INDN SULA U T auroni tens IN INDN SULA U T auroni tens IN INDN SULA U T auroni tens IN INDN SULA U T 6 8 auroni tens IN INDN SULA U T C. Curgia wilsoni RB 2295 CR GUAN XZ sp CN CNTLV CHIN Guangdong HM sp. INDN Sula atara THAI 5 0 auroni tens IN INDN SULA U T group auroni tens IN INDN SULA U T auroni tens IN INDN SULA U T

auroni tens IN INDN SULA U T

C. Curgia bisectilis RB 2361 CR S JO suthepensis THAI burmana THAI lannaensis LAO

lannaensis THAI Curgia tsudai KK JP OKI tsudai JPTRI JP Chubu tsudai JPTRI JP Chubu C. Curgia barrettae RB 0645 NIC JIN 1 6 1 6 tsudai JPTRI JP Chubu oreithyia BHU joliveti T HAI Mae Hong Son 6 0 joli veti KK THAI Lampang

Nicaragua/Costa Rica j olive ti THAI Lampang jolive ti THAI Lampang 9 9 C. Curgia barrettae RB 3034 NIC JIN joli veti L AO HOU jolive ti THAI Lampang

joliveti THA I Lampang orumbera DC AUS WA OF sp MG OFSI MAD FIAN

OF sp MG OFSI MAD FIAN maculata IBOL NHRS PCH SIsl KOL Is

C. Curgia barrettae RB 3033 NIC JIN maculata IBOL NHRS PCH SIsl KOL Is zagroensis IQTRA IRQ A Sul z agroensis IQTRA IRQ A Sul

61 zagroensis IQTRA IRQ A Sul adnama IN INDN SULA UT 5 4 a dnama IN INDN SULA UT 100 C. Curgia barrettae RB 2395 CR PUNT adnama IN INDN SULA UT IN INDN SULA UT

CJG sp IN IN INDN SULA UT CJG sp IN IN INDN SULA UT

CJG sp IN IN INDN SULA UT CJG sp IN IN INDN SULA UT

CJG sp IN IN INDN SULA UT C. Curgia barrettae RB 0644 CR PUNT CJG sp IN IN INDN SULA UT CJG sp IN IN INDN

Nicaragua CJG sp IN IN INDN SULA UT

chiangmaiensis THAI Lampang

chiangmaiensis THAI Lampang tallawalla DC AUS VIC australica DC AUS NSW

C. Curgia aureopunctata RB 2278 NIC MAT DC AUS NSW *** vitapinensis IBOL NHRS PCH SIsl GUAD gvc L AUS QUE 2 7 DC AUS QUE 60 karakara DC AUS QUE

5 100 karakara AUS QUE DC AUS QUE C. Curgia maritza RB 2284 CR PUNT karakara DC AUS QUE

karakara KK AUS QUE karakara gvc L AUS QUE karakara gvc L AUS QUE karakara gvc L AUS QUE karakara gvc L AUS QUE

Costa Rica C. Curgia maritza RB 2398 CR GUAN karakara gvc L AUS QUE OF sp JP OFSI JP OKI bibaringa DC AUS QUE

MS AUS QUE

sp AV MS AUS QUE 7 0 bibaringa MS AUS QUE

bibaringa DC AUS QUE C. Curgia purisca RB 2410 CR PUNT DC AUS QUE 9 5 australica DC AUS QUE

DC AUS QUE

DC AUS QUE DC AUS QUE

DC AUS QUE

stclairae DC AUS QUE C. Curgia purisca RB 2413 CR ALAJ stclairae DC AUS QUE

biramosa IBOL NHRS PCH SIsl GUAD biramosa IBOL NHRS PCH SIsl KOL Is

9 2 biramosa IBOL NHRS PCH SIsl KOL Is biramosa IBOL NHRS PCH SIsl KOL Is biramosa IBOL NHRS PCH SIsl KOL Is

7 C. Curgia purisca RB 2411 CR S JO biramosa IBOL NHRS PCH SIsl KOL Is pipake T HAI Chiang Ma i

pipake T HAI Chiang Ma i nr. bimbltona CN CHIN Guangxi bimbltona THAI Mae Hong Son

bimbltona THAI Mae Hong Son talinensis IBOL NHRS PCH SIsl KOL Is

C. Curgia pablito RB 0790 CR ALAJ talinensis IBOL NHRS PCH SIsl GUAD 100 DC AUS QUE

amarganth UAE Costa Rica/Columbia amarganth HM Q UAE rosavensis IBOL NHRS PCH SIsl GUAD akkaorum THAI Chiang Mai 7 8 akkaorum THAI Mae Hong Son C. Curgia pablito RB 2401 CR ALAJ akkaorum THAI Mae Hong Son akkaorum THAI Mae Hong Son

akkaorum THAI Chiang Mai sp COL COL V d CAU

sp COL COL V d CAU limon CR CART

C. Curgia pablito RB 0791 COL V d CAU limon CR CART emima VEN ZUL picea CR ALAJ picea CR LIM

picea CR ALAJ 2 emima CR PUNT Costa Rica/Guyana 100 picea CR GUAN C. Curgia banksi RB 0642 CR PUNT emima CR PUNT

tapanti CR PUNT tapanti OF CR CART jemima CR PUNT jemima CR ALAJ jemima CR CART jemima KK C. Curgia banksi 10OF 180 GUY 2 8 jemima CR LIM decimlobata COL V d CAU

decimlobata COL V d CAU limon VEN Lara paracreagra COL Cauca

paracreagra COL Cauca C. Curgia texana 08OF 0853 US TX creagra VEN Lara sp VEN VEN TRUJ

sp VEN VEN Lara U.S. Texas/Costa Rica 9 9 creagra VEN creagra VEN MIR creagra VEN Lara

creagra VEN FAL C. Curgia texana CSUPOBK 0985 US TX creagra VEN FAL creagra VEN FAL

creagra VEN FAL vitapinensis IBOL NHRS PCH SIsl KOL Is babarensis IBOL NHRS PCH SIsl KOL Is

fuscipes SAF KZN ambulans SAF W CAP C. Curgia texana 08OF 0855 US TX 5 3 ambulans SAF E CAP THEA MX HID

THEA MX HID primula OF US AZ primula OF US AZ

primula OF US AZ monorum THAI Chiang Mai C. Curgia texana CSUPOBK 0984 US TX 0 monorum THAI Chiang Mai 4 3 monorum THAI Chiang Mai monorum THAI Mae Hong Son

monorum THAI Mae Hong Son ridleyi OF US NM 1 5 ridleyi BBTUS US AZ C. Curgia texana RB 2294 MX NL ridleyi US AZ

ridleyi BBTUS US MI laguna group angustipennis US AZ angustipennis OF US TX

3 0 angustipennis OF US AZ angustipennis OF US TX angustipennis VEN ZUL C. Curgia texana 08OF 0854 US TX*** angustipennis VEN POR monticola DC AUS NSW australica DC AUS NSW

59 australica DC AUS QUE PNGTR PNG MAD PNGTR PNG MAD OF sp PNG PNGTR PNG MAD C. Curgia texana CSUPOBK 0983 US TX 2 0 OF sp PNG OFSI PNG MAD 1 4 ventrospina IBOL NHRS PCH SIsl KOL Is adelphe CR PUNT adelphe CR PUNT

adelphe CR PUNT bauerfielda bauerfielda IBOL NHRS PCH VANU Efateerfielda

C. Curgia laguna RB 0787 CR GUAN bauerfielda bauerfielda IBOL NHRS PCH VANU Efateerfielda bauerfielda vanua IBOL NHRS PCH VANU Es SANua

bauerfielda vanua IBOL NHRS PCH VANU MALua

bauerfielda bauerfielda IBOL NHRS PCH VANU Es SANerfielda

malaculensis IBOL NHRS PCH VANU MAL

malaculensis IBOL NHRS PCH VANU MAL 2 6 bauerfielda bauerfielda IBOL NHRS PCH VANU Es SANerfielda C. Curgia texana CSUPOBK 0986 US TX bauerfielda bauerfielda IBOL NHRS PCH VANU Es SANerfielda butmasensis IBOL NHRS PCH VANU Es SAN

butmasensis IBOL NHRS PCH VANU Es SAN solomoensis IBOL NHRS PCH SIsl KOL Is 5 5 solomoensis IBOL NHRS PCH SIsl KOL Is solomoensis IBOL NHRS PCH SIsl KOL Is C. Curgia texana 08OF 0857 US TX solomoensis IBOL NHRS PCH SIsl KOL Is solomoensis IBOL NHRS PCH SIsl KOL Is solomoensis IBOL NHRS PCH SIsl GUAD

6 3 solomoensis IBOL NHRS PCH SIsl KOL Is protuberans BOL La Paz rhamphodes BOL La Paz

rhamphodes BOL La Paz C. Curgia texana 08OF 0856 US TX uara BRZ Min Ger uara BRZ Min Ger uara BRZ Min Ger

uara BRZ Min Ger elia OF US TX 2 4 elia OF US NV Brazil/Peru gibba CR GUAN C. Curgia scopuloides RB 2438 BRZ Min G er*** gibba CR GUAN

77 lata CR GUAN

Curgia dudosa PAN S Blas munozi CR HER

munozi CR ALAJ OF sp MG OFSI MAD FIAN C. Curgia donamariae 10OF 1000 PER M d D beameri OF US TX flinti VEN Lara Chimarrita flinti VEN FAL flinti VEN Sucre flinti VEN ZUL flinti CR GUAN

flinti CR LIM 4 C. Chimarrita rosalesi W1*** sp COL COL Cauca poolei VEN FAL

0 41 poolei VEN ARA spangleri CR PUNT spangleri CR ALAJ 2 9 spangleri CR GUAN

Otarrha spangleri CR LIM C. Otarrha redonda RB 0819 Dre La Vega adamsae BRZ Min Ger adamsae BRZ Parana

adamsae BRZ S Paulo 0 adamsae PER M d D sp BOL BOL La Paz

sp BOL BOL La Paz amica CR GUAN C. Otarrha septemlobata RB 0806 COL Antioquia amica CR GUAN alata CR GUAN dentosa CR GUAN

sp BR BRZ S Paulo

sp BR BRZ Min Ger duckworthi COL MAGD

C. Curgia otuzcoensis RB 2400 ECU Pichincha duckworthi CR GUAN 5 duckworthi CR GUAN bidens OF GUY caribea OF Tr&To caribea OF GREN caribea OF GREN Brazil caribea OF GREN virgencita CR CART virgencita OF CR ALAJ

C. Curgia tucuna RB 2422 BRZ Amazonas virgencita CR CART longiterga CR PUNT

longiterga CR GUAN ortiziana CR PUNT paraortiziana NIC Esteli 1 5 8 5 colmillo CR GUAN Curgia peineta CR PUNT

Peru/Columbia C. Curgia margaritae RB 0788 COL V d CAU peineta CR GUAN

margaritae group pollex OF CR ALAJ pollex CR GUAN

pollex CR GUAN C. Curgia chrysosoma RB 3041 PER Cuzco villalobosi CR PUNT wilcuma COL MAGD

wilcuma COL MAGD wilcuma VEN Lara villalobosi CR PUNT

100 wilcuma VEN Lara Brazil C. Curgia cipoensis RB 2376 BRZ Min Ger n. sp VE VEN Sucre platyrhina VEN FAL platyrhina VEN Lara

platyrhina VEN Lara platyrhina VEN GUA platyrhina VEN GUA

platyrhina VEN GUA C. Curgia cipoensis RB 2373 BRZ Min Ger ruficeps DR SAF KZN vanuatensis IBOL NHRS PCH VANU Es SAN 2 2 vanuatensis IBOL NHRS PCH VANU Es SAN vanuatensis IBOL NHRS PCH VANU MAL vanuatensis IBOL NHRS PCH VANU MAL

vanuatensis IBOL NHRS PCH VANU MAL veveensis IBOL NHRS PCH SIsl KOL Is

C. Curgia straminea RB 2424 VEN TRUJ veveensis IBOL NHRS PCH SIsl KOL Is

kolombangensis IBOL NHRS PCH SIsl KOL Is

kolombangensis IBOL NHRS PCH SIsl KOL Is kolombangensis IBOL NHRS PCH SIsl KOL Is 5 6 kolombangensis IBOL NHRS PCH SIsl GUAD Venezuela kolombangensis IBOL NHRS PCH SIsl KOL Is 100 k olombangensis IBOL NHRS PCH SIsl KOL Is C. Curgia sp 2 VEN RB 2423 VEN MER kolombangensis IBOL NHRS PCH SIsl KOL Is

kolombangensis IBOL NHRS PCH SIsl KOL Is falculata ARChf US FL falculata FL US FL falculata ARChf c US FL

4 0 falculata ARChf b US FL C. Curgia sp 2 VEN RB 2425 VEN MER florida FL US FL florida US LA florida FL US FL florida FL US FL florida FL US FL florida OF US MS canoaba group florida OF US MS C. Curgia nr. irwini RB 3019 VEN BAR socia FormTOexpt CAN NBR 9 0 socia NBEPT CAN NBR socia ON CAN ONT socia HIMXD US NC socia US MN

socia NBEPT CAN NBR C. Curgia n. sp 3 VEN RB 3065 VEN Lara socia US NJ 100 socia NBEPT CAN NBR socia ON CAN ONT

socia FormTOexpt CAN NBR socia NBEPT CAN NBR socia EPA CAN ONT

socia NBEPT CAN NBR socia EPA US MD C. Curgia n. sp 3 VEN RB 3066 VEN Lara socia PKS US KY socia US MN socia US MN 7 9 socia US MN socia US MN

socia PROBE CAN MAN C. Curgia n. sp 3 RB 2407 VEN Lara socia NBEPT CAN NBR socia NBEPT CAN NBR socia FormTOexpt CAN NBR socia NBEPT CAN NBR socia NBEPT CAN NBR 4 socia NBEPT CAN NBR 9 9 C. Curgia barinita RB 3038 VEN BAR socia FormTOexpt CAN NBR Curgia augusta OF US NC augusta OF US VA augusta GSM US TN

augusta US TN feria OF US TX

feria OF US TX C. Curgia barinita RB 0646 COL MAGD*** feria US MN 5 4 feria US MN Venezuela/Columbia feria KK US MN

55 feria AF aterrima ARCha US FL aterrima BB CAN NFL fernadezi group aterrima US NJ C. Curgia fernandezi RB 2283 VEN GUA aterrima CR US SC aterrima US NJ aterrima CB CAN NBR aterrima NBEPT CAN NBR 0 aterrima CB CAN NBR US MD 1 8 C. Curgia n. sp 1 COL RB 2443 COL V d CAU US MD US MD

US MD

US MD US MD US MD 9 9 US MD 100 US MD C. Curgia costaricensis RB 2384 CR PUNT US MD US MD US MD US MD

US MD US MD C. Curgia costaricensis RB 2383 CR GUAN US MD

US MD US MD US MD

US MD 9 9 US MD

US MD C. Curgia beckeri RB 2360 BRZ R d Jan*** Brazil/Guyana US MD

US MD US MD US MD aterrima US MD aterrima EPA US MD US MD C. Curgia beckeri 10OF 179 GUY sp MLS US MD 53 US MD

US MD

US MD US MD sp MLS US MD 1 1 100 C. Curgia boraceia RB 2440 BRZ Min Ger sp MLS US MD 2 US MD US MD US MD US MD

US MD sp CNW US MD C. Curgia boraceia RB 3037 BRZ Min Ger US MD US MD US MD

2 aterrima US MD sp CNW US MD US MD C. Curgia boraceia RB 3036 BRZ Min Ger US MD US MD

100 US MD aterrima SWRC US PA 6 8 Brazil aterrima SWRC US PA aterrima SWRC US PA aterrima SWRC US PA C. Curgia boraceia RB 2439 BRZ Min Ge r*** aterrima SWRC US PA

aterrima SWRC US PA US MD 54 aterrima SWRC US PA

US MD US MD US MD C. Curgia n. sp 9 BR RB 3013 BRZ Min Ger US MD

sp MLS US MD US MD

4 3 aterrima PKS US VA

US MD 100 aterrima PKS US KY C. Curgia sp 1 BR RB 2426 BRZ Paran a aterrima EPA US VA aterrima US VA

aterrima PKS US AL aterrima US MD aterrima US MD sp CNW US MD 6 1 US MD C. Curgia n. sp 1 BR RB 3068 BRZ S Cat US MD US MD US MD 3 US MD aterrima EPA US MD US MD C. Curgia sp 6 BR RB 2435 BR Z Min Ger US MD 9 3 US MD US MD

US MD antigua MX NL

antigua MX NL 9 6 utahensis OF US AZ C. Curgia n. sp 2 BR RB 3070 BRZ Min Ger utahensis US AZ utahensis OF US AZ utahensis OF US CO

utahensis US SD siva DR US AZ schiza MX NL schiza MX NL C. Curgia n. sp 2 BR RB 3071 BRZ R d Jan adella MX CHI

adella MX CHI DC AUS QUE neboissi AUS QUE

Brazil neboissi DC AUS QUE

DC AUS QUE morio group C. Curgia n. sp 3 BR RB 3072 BRZ S Paulo neboissi DC AUS QUE 9 8 marginata ESP C L Man

marginata ESP C L Man marginata ESP C L Man marginata ESP C L Man

marginata ESP C L Man 6 7 marginata NOR HOR C. Curgia centrispina RB 3039 BRZ Min Ger marginata ESP C L Man marginata BC ZSM AQU GER Bavaria

marginata POR argentinica BOL S Cruz

argentinica BOL S Cruz obscura US MN obscura US NJ

C. Curgia n. sp 3 BR RB 3073 BRZ S Paulo obscura ON CAN ONT obscura PKS US VA obscura ATETH US MI

obscura US MN obscura ELEPT CAN ONT

1 8 obscura ELEPT CAN ONT Brazil US MD C. Curgia conica RB 2381 BRZ S Paulo US MD

100 obscura EPA US MD 0 obscura ELEPT CAN ONT obscura ELEPT CAN ONT

obscura gsep tW CAN ONT US MD US MD C. Curgia conica RB 2379 BRZ Min Ger 4 7 US MD

obscura ATETH US MI obscura ATETH US MI obscura ELEPT CAN ONT obscura ELEPT CAN ONT obscura ELEPT CAN ONT

C. Curgia conica RB 2380 BRZ Min Ger *** obscura ON CAN ONT obscura AVMTT CAN QUE obscura ON CAN ONT 2 1 8 2 obscura PKS US VA 58 US MD

US MD C. Curgia conica RB 2377 BRZ Min Ger obscura EPA CAN ONT obscura ELEPT CAN ONT

obscura US MN

obscura ELEPT CAN ONT obscura ELEPT CAN ONT obscura ON CAN ONT obscura ELEPT CAN ONT 9 2 C. Curgia n sp. 10 BR RB 3075 BRZ Min Ge r obscura ON CAN ONT obscura ELEPT CAN ONT obscura ON CAN ONT obscura ELEPT CAN ONT obscura ELEPT CAN ONT

obscura ELEPT CAN ONT

9 6 obscura ELEPT CAN ONT Brazil C. Curgia sp 10 BR RB 2441 BR Z Min Ger obscura ELEPT CAN ONT obscura PKS US TN obscura ELEPT CAN ONT

obscura ELEPT CAN ONT obscura ELEPT CAN ONT

obscura PKS US KY

obscura ELEPT CAN ONT C. Curgia froehlichi RB 2392 BRZ S Paulo 8 9 obscura ELEPT CAN ONT obscura PKS US TN

obscura EPA US TX

obscura PKS US TN obscura INHST US IL

obscura ELEPT CAN ONT obscura PKS US TN C. Curgia froehlichi RB 2393 BRZ R d Jan obscura ON CAN ONT obscura ATETH US MI 9 8 obscura FL US FL 9 5 obscura ATETH US MI obscura ELEPT CAN ONT C. Curgia albomaculata 10OF 302 PR obscura ELEPT CAN ONT 100 C. Curgia froehlichi RB 2394 BRZ R d Jan obscura ELEPT CAN ONT obscura ELEPT CAN ONT Puerto Rico obscura ELEPT CAN ONT

obscura US MN obscura ELEPT CAN ONT obscura ELEPT CAN ONT

obscura ELEPT CAN ONT obscura ELEPT CAN ONT

obscura US MN C. Curgia albomaculata RB 0641 PR*** obscura ELEPT CAN ONT obscura ELEPT CAN ONT obscura ELEPT CAN ONT

obscura ON CAN ONT 66 obscura ELEPT CAN ONT obscura gsep tAC CAN ONT 6 4 obscura ELEPT CAN ONT

Curgia 100 C. Curgia gilvimacula RB 2396 Dre Pedernales obscura ELEPT CAN ONT Dominican Republic/Guyana/Brazil 100 C. Curgia gilvimacula RB 0786 Dre Pedernales braconoides group . 9 9 C. Curgia braconoides 10OF 177 GUY Curgia Bolivia 6 1 C. Curgia braconoides 10OF 175 BRZ C. Curgia distermina RB 2444 BOL La Pa z *** C. Curgia braconoides 10OF 176 GUY 52 7 3 Peru C. Otarrha parilis RB 2469 PER M d D 1 Bolivia 100 C. Otarrha patosa RB 2448 BOL La Paz C. Otarrha patosa RB 2447 BOL La Pa z *** 2 2 2 Venezuela 49 C. Chimarra tachuela RB 2470 VEN MER*** Otarrha Puerto Rico 100 C. Otarrha puertoricensis DR0810 172 PR 47 1 C. Otarrha puertoricensis RB 2297 P R*** 50 1 Columbia/Costa Rica 9 9 C. Otarrha phthanorossi RB 0818 COL Choco 9 6 C. Otarrha rossi RB 0816 CR GUAN 100 C. Otarrha rossi RB 0817 CR ALAJ 5 1 C. Otarrha rossi AF436579 6 8 C. Otarrha rossi KK 0024 CR HER *** 48 C. Otarrha odonta complex BR RB 2471 BR Z Min Ger Brazil 9 6 8 0 C. Otarrha odonta complex RB 3086 BRZ Min Ger 2 6 C. Otarrha odonta complex RB 2476 BRZ Min Ger C. Otarrha odonta complex RB 3082 BRZ S Paulo C. Otarrha odonta complex RB 3084 BRZ R d Jan 3 8 2 7 C. Otarrha odonta complex RB 2474 BRZ S Paulo 1 4 1 9 8 C. Otarrha odonta complex RB 3088 BRZ S Cat 4 7 C. Otarrha odonta complex RB 3078 BRZ S Cat C. Otarrha odonta complex RB 3083 BRZ S Paulo Chimar r 9 9 9 9 C. Otarrha odonta complex RB 3087 BRZ R d Jan 100 C. Otarrha odonta complex RB 3077 BRZ R d Jan 2 0 C. Otarrha odonta complex RB 2296 BRZ R d Jan *** 46 C. Otarrha odonta complex RB 2475 BRZ S Paulo 6 1 C. Otarrha odonta complex RB 2468 BRZ R d Jan 5 8 C. Otarrha odonta complex RB 3081 BRZ R d Jan 5 5 C. Otarrha odonta complex RB 2473 BRZ R d Jan Costa Rica 100 C. Curgia centralis RB 2155 CR PUNT 3 7 C. Curgia centralis RB 2370 CR LIM Columbia/Bolivia C. Curgia minca RB 0789 COL MAGD 9 3 C. Curgia peruviana RB 2454 BOL S Cruz *** 75 a ( F Bolivia 5 1 C. Curgia geranoides RB 2285 COL Cauca C. Curgia piliferosa RB 2305 BOL La Paz *** 78 Curgia 3 1 100 C. Curgia teresae RB 2416 BRZ Min Ger Brazil C. Curgia teresae RB 2442 BRZ Min Ger 8 1 9 4 C. Curgia sp 4 BR RB 2428 BRZ Parana*** 73 7 1 C. Curgia sp 4 BR RB 2418 BRZ R d Jan*** i g 1 7 3 5 C. Curgia sp 4 BR RB 2431 BRZ R d Jan 72 Bolivia 9 2 C. Curgia sp 4 BR RB 2429 BRZ R d Jan

. ES1B) 2 8 C. Curgia mycterophora RB 2449 BOL La Pa z*** 74 Brazil 100 C. Curgia camposae RB 2369 BRZ S Paulo 9 6 C. Curgia camposae RB 2368 BRZ Min Ger 9 0 C. Curgia camposae RB 2367 BRZ Min Ger 3 5 7 8 C. Curgia camposae RB 2364 BRZ Min Ger “banksi” group (part) C. Curgia camposae RB 2365 BRZ Min Ger 7 1 C. Curgia camposae RB 2366 BRZ Min G er 100 C. Curgia sp 7 BR RB 2437 BRZ Min Ger C. Curgia sp 7 BR RB 2436 BRZ Min Ger *** 67 C. Curgia brasiliana RB 2362 BRZ S Cat *** 69 Brazil 7 4 6 0 9 9 C. Curgia parana RB 2434 BRZ Min Ger *** 100 C. Curgia parana RB 2405 BRZ S Cat 70 C. Curgia XZ sp BZ1 09MPBZT 057 BRZ Parana 71 9 6 C. Curgia XZ sp BZ1 09MPBZT 044 BRZ Parana 7 7 9 5 C. Curgia brasiliana RB 2363 BRZ S Cat 9 9 C. Curgia cultellata RB 2387 BRZ Min Ger 100 C. Curgia cultellata RB 2433 BRZ Min Ge r 68 6 1 C. Curgia cultellata RB 3043 BRZ Min Ger 9 5 C. Curgia sp 5 BR RB 2390 BRZ Min Ger C. Curgia sp 5 BR RB 2385 BRZ Min Ger 3 6 7 8 C. Curgia sp 5 BR RB 2388 BRZ Min Ger C. Curgia sp 5 BR RB 2386 BRZ Min Ger Congo 100 Chimarra elga SUP0309 CONG Sud Kivu Chimarra elga SUP0293 CONG Sud Kivu 4 8 9 9 Chimarra elga SUP273 CONG Congo/Cape Verde Chimarra sp. SUP0291 CONG Sud Kivu 8 7 100 Chimarra caboverdensis 08HM 038 Cve Chimarra caboverdensis SUP0292 CONG Sud Kivu 0 South Africa . ES1A) Chimarra uranka DC 143 AUS WA Chimarra ruficeps DR 0810 171 SAF KZN Australia 100 Chimarra uranka DC 131 AUS WA 9 7 Chimarra vanuatensis IBOL NHRS PCH052 VANU Es SAN i g Chimarra gvc11503 1L AUS QUE Vanuatu 100 Chimarra vanuatensis IBOL NHRS PCH051 VANU Es SAN 4 1 Chimarra uranka RB 0632 AUS QUE*** 21 Chimarra gvc12778 1L AUS QUE 9 9 Chimarra vanuatensis IBOL NHRS PCH040 VANU MAL ( F Chimarra vanuatensis IBOL NHRS PCH048 VANU MAL Chimarra gvc12781 1L AUS QUE 5 2 Chimarra vanuatensis IBOL NHRS PCH049 VANU MAL Chimarra uranka DC036 AUS QUE 4 100 Chimarra veveensis IBOL NHRS PCH034 SIsl KOL Is Chimarra gvc12782 1L AUS QUE Chimarra veveensis IBOL NHRS PCH035 SIsl KOL Is Chimarra gvc12779 1L AUS QUE 0 1 7 100 9 4 Chimarra uranka gvc11018 1L AUS QUE Solomon Isles Chimarra kolombangensis IBOL NHRS PCH014 SIsl KOL Is Chimarra uranka gvc14845 1L AUS QUE 5 6 Chimarra kolombangensis IBOL NHRS PCH017 SIsl KOL Is Thailand Chimarra gvc12780 1L AUS QUE Chimarra kolombangensis IBOL NHRS PCH015 SIsl KOL Is Chimarra htinorum HM1211 87 THAI 7 3 Chimarra kolombangensis IBOL NHRS PCH018 SIsl GUAD Bhutan/Thailand Chimarra megara 08HM 226 BHU Punakha*** 6 5 7 100 Chimarra kolombangensis IBOL NHRS PCH016 SIsl KOL Is Chimarra 3 1 Chimarra kolombangensis IBOL NHRS PCH021 SIsl KOL Is 9 7 Chimarra spinifera HM1211 46 THAI Mae Hong Son 9 1 Chimarra kolombangensis IBOL NHRS PCH019 SIsl KOL Is 5 Indonesia Chimarra spinifera 08HM 241 THAI Chiang Mai*** 12 2 7 3 Chimarra kolombangensis IBOL NHRS PCH020 SIsl KOL Is 100 Chimarra batukaua 10HM 011 INDN Nusa Tenggara Barat U.S. Florida 9 4 Chimarra falculata ARChf8 US FL Chimarra batukaua 10HM 291 INDN Nusa Tenggara Barat Chimarra falculata 08FL 005 US FL 4 8 3 5 Chimarra batukaua HM0111 81 INDN Bali 4 8 9 9 3 0 Chimarra batukaua HM0111 82 INDN Nusa Tenggara Barat Chimarra falculata ARChf8c US FL 2 9 Chimarra batukaua 10HM 018 INDN Bali 9 4 U.S. Florida, Lousiana, Missouri Chimarra falculata ARChf8b US FL 8 4 Chimarra batukaua 10HM 292 INDN Bali 100 Chimarra florida 08FL 075 US FL 100 7 2 Chimarra florida RB 0592 US LA 2 8 1 8 Chimarra suadulla 08HM 247 THAI Chiang Mai *** 8 Chimarra florida 08FL 089 US FL Chimarra suadulla 08HM 327 THAI Chiang Mai 2 7 7 0 Chimarra florida 08FL 028 US FL 2 2 Indonesia 7 1 Chimarra auronitens 04IN 060 INDN SULA UT 3 3 Chimarra florida 08FL 052 US FL 9 9 Chimarra auronitens 04IN 210 INDN SULA UT 7 8 Chimarra florida 08OF 0839 US MS Chimarra auronitens 04IN 061 INDN SULA UT 8 1 Chimarra florida 08OF 0838 US MS 4 1 8 6 Chimarra auronitens 04IN 102 INDN SULA UT 100 Chimarra socia FormTOexpt064 CAN NBR most of obscura group Chimarra auronitens 04IN 131 INDN SULA UT Canada/U.S. Chimarra socia 08NBEPT 1179 CAN NBR 2 4 8 Chimarra auronitens 04IN 059 INDN SULA UT (missing C. obsura) China 1 7 Chimarra auronitens 04IN 103 INDN SULA UT tsudai group 9 9 Chimarra socia 07ON 0013 CAN ONT Chimarra XZ sp CN1 02CNTLV 048 CHIN Guangdong 2 8 8 0 Chimarra socia 10HIMXD 0087 US NC Thailand/Indonesia Chimarra HM sp. HM0810 161 INDN Sula Chimarra socia RB 2131 US MN 4 Chimarra atara HM1211 81 THAI Chimarra socia 08NBEPT 1196 CAN NBR 5 1 3 6 Chimarra socia RB 1497 US NJ*** 0 4 Chimarra auronitens 04IN 154 INDN SULA UT 27 2 5 9 7 Chimarra auronitens 04IN 182 INDN SULA UT 7 5 9 9 Chimarra socia 08NBEPT 0232 CAN NBR 28 Chimarra auronitens 04IN 184 INDN SULA UT Chimarra socia 07ON 0014 CAN ONT 9 7 Chimarra auronitens 04IN 116 INDN SULA UT Chimarra socia FormTOexpt120 CAN NBR 1 Thailand/Laos Chimarra suthepensis HM1211 78 THAI Chimarra socia 08NBEPT 1158 CAN NBR 1 5 Chimarra burmana HM1211 89 THAI Chimarra socia EPA0448 CAN ONT 5 8 Chimarra socia 08NBEPT 0024 CAN NBR 9 0 Chimarra lannaensis 08HM 105 LAO*** 10 100 Chimarra socia EPA0447 US MD Japan Chimarra lannaensis HM1211 77 THAI Chimarra socia 07 17PKS 0024 US KY 8 Chimarra tsudai KK 0018 JP OKI*** 11 9 4 Chimarra socia RB 0625 US MN 7 3 9 9 Chimarra tsudai 10JPTRI 024 JP Chubu 2 3 Chimarra socia RB 2132 US MN 9 0 Chimarra tsudai 10JPTRI 025 JP Chubu Chimarra socia RB 0624 US MN 5 9 Bhutan Chimarra tsudai 10JPTRI 023 JP Chubu 7 9 Chimarra socia RB 0364 US MN Chimarra oreithyia 08HM 227 BHU*** 7 Chimarra socia 07PROBE 01773 CAN MAN 1 9 9 4 Chimarra joliveti 08HM 102 THAI Mae Hong Son Chimarra socia 08NBEPT 0630 CAN NBR Thailand/Laos 8 4 Chimarra joliveti KK 0427 THAI Lampang 100 Chimarra joliveti 07HM 0275 THAI Lampang Chimarra socia 08NBEPT 1197 CAN NBR Chimarra joliveti 07HM 0277 THAI Lampang 5 8 Chimarra socia FormTOexpt068 CAN NBR 5 5 Chimarra joliveti 08HM 242 LAO HOU*** 9 Chimarra socia 08NBEPT 0296 CAN NBR 5 0 Chimarra joliveti 07HM 0276 THAI Lampang Chimarra socia 08NBEPT 1155 CAN NBR 9 8 Chimarra joliveti 08HM 096 THAI Lampang Chimarra socia 08NBEPT 1180 CAN NBR 3 2 Australia Chimarra orumbera DC 142 AUS WA Chimarra socia FormTOexpt060 CAN NBR 8 0 U.S. N. Carolina, Virginia, Tennesee 100 Chimarra augusta 08OF 0829 US NC Madagascar Chimarra OF sp MG11 10OFSI 0293 MAD FIAN Chimarra augusta 08OF 0828 US VA Chimarra OF sp MG9 10OFSI 0292 MAD FIAN 8 5 6 Solomon Isles 2 5 Chimarra maculata IBOL NHRS PCH011 SIsl KOL Is 9 3 Chimarra augusta 07GSM 0464 US TN*** 30 Chimarra maculata IBOL NHRS PCH010 SIsl KOL Is Chimarra augusta RB 0555 US TN 1 4 9 7 Chimarra feria 08OF 0837 US TX Iraq 100 Chimarra zagroensis 12IQTRA 0008 IRQ A Sul U.S. Texas, Minnesota 100 Chimarra feria 08OF 0836 US TX Chimarrhodella tapanti CR PUNT Chimarrhodella galeata KK BOL S Cruz Chimarrhodella nigra VEN Lara Chimarra zagroensis 12IQTRA 0007 IRQ A Sul Chimarrhodella nigra VEN Lara Chimarrhodella paria VEN Sucre 4 2 Chimarrhodella tobagoensis VEN Sucre 9 7 Chimarrhodella pilcopata BOL La Paz Chimarra feria RB 2085 US MN

Chimarrhodella pilcopata BOL La Paz 8 3 0 Chimarrhodella costaricensis CR ALAJ Chimarra zagroensis 12IQTRA 0026 IRQ A Sul Chimarrhodella peruviana VEN BAR

Chimarrhodella peruviana COL V d CAU 0 Chimarrhodella ulmeri BOL La Paz Chimarrhodella ulmeri VEN Lara Chimarra feria RB 2083 US MN Chimarrhodella ulmeri AF

Chimarrhodella ulmeri VEN ARA immaculata BOL La Paz 100 Chimarra adnama 04IN 231 INDN SULA UT peytoni VEN Lara

immaculata BOL La Paz 5 1 peytoni VEN Lara peytoni COL MAGD Chimarra feria KK 0014 US MN*** persimilis COL V d CAU

persimilis CR LIM 31 Chimarra adnama 04IN 180 INDN SULA UT simpliciforma OF GUY U De Ber 7 7 kontilos BRZ S Paulo camella BRZ S Paulo camella BRZ R d Jan

9 9 camella BRZ S Paulo Chimarra feria AF436578

camura BRZ R d Jan sp BR BRZ Min Ger Chimarra adnama 04IN 232 INDN SULA UT camella BRZ S Paulo

Indonesia sp BR BRZ S Paulo 4 0 aurivittata OF GUY U De Ber U.S./Canada maldonadoi OF PR Chimarra aterrima ARCha8 US FL 9 9 100 maldonadoi KK PR

usitatissima BRZ Min Ger

spatulata CR GUAN Chimarra 04IN 188 INDN SULA UT didyma VEN ZUL

didyma VEN ZUL 6 5 wilsoni CR PUNT wilsoni CR GUAN Chimarra aterrima 10BB 066 CAN NFL bisectilis OF BRZ Min Ger wilsoni CR GUAN

Chimarra CJG sp IN1 04IN 035 INDN SULA UT bisectilis CR S JO 8 9 barrettae NIC JIN

barrettae NIC JIN barrettae NIC JIN 9 9 barrettae CR PUNT Chimarra aterrima RB 1499 US NJ

barrettae CR PUNT aureopunctata NIC MAT

Chimarra CJG sp IN1 04IN 120 INDN SULA UT maritza CR PUNT

maritza CR GUAN purisca CR PUNT purisca CR ALAJ 6 4 Chimarra aterrima CR 082 US SC purisca CR S JO pablito CR ALAJ 4 2 pablito CR ALAJ

Chimarra CJG sp IN1 04IN 069 INDN SULA UT pablito COL V d CAU banksi CR PUNT

banksi OF GUY 3 7 texana OF US TX Chimarra aterrima RB 1500 US NJ*** texana CSUPOBK US TX texana OF US TX 29 Chimarra CJG sp IN1 04IN 114 INDN SULA UT texana CSUPOBK US TX 6 6 texana MX NL texana OF US TX

texana CSUPOBK US TX 6 1

7 3 laguna CR GUAN Chimarra aterrima 09CB 149 CAN NBR texana CSUPOBK US TX texana OF US TX

Chimarra CJG sp IN1 04IN 181 INDN SULA UT texana OF US TX scopuloides BRZ Min Ger

donamariae OF PER M d D 6 5 5 2 Chimarrita rosalesi Chimarra aterrima 08NBEPT 0624 CAN NBR redonda Dre La Vega 6 0 septemlobata COL Antioquia otuzcoensis ECU Pichincha Chimarra CJG sp IN1 04IN 134 INDN SULA UT tucuna BRZ Amazonas 4 0 margaritae COL V d CAU

chrysosoma PER Cuzco cipoensis BRZ Min Ger Chimarra aterrima 09CB 146 CAN NBR

cipoensis BRZ Min Ger 4 4 straminea VEN TRUJ sp VEN VEN MER Chimarra CJG sp IN1 04IN 063 INDN sp VEN VEN MER nr. irwini VEN BAR n. sp VEN VEN Lara 5 1 n. sp VEN VEN Lara Chimarra 4903721094 US MD

n. sp VEN Lara barinita VEN BAR

Chimarra CJG sp IN1 04IN 034 INDN SULA UT barinita COL MAGD fernandezi VEN GUA

n. sp COL COL V d CAU Thailand costaricensis CR PUNT Chimarra 1503720546 US MD 0 costaricensis CR GUAN beckeri BRZ R d Jan 100 U.S. beckeri OF GUY Chimarra chiangmaiensis 08HM 324 THAI Lampang boraceia BRZ Min Ger

bo raceia BRZ Min Ger boraceia BRZ Min Ger 7 8

boraceia BRZ Min Ger Chimarra 3603720818 US MD n. sp BR BRZ Min Ger sp BR BRZ Parana

n. sp BR BRZ S Cat Chimarra chiangmaiensis 08HM 245 THAI Lampang*** sp BR BRZ Min Ger n. sp BR BRZ Min Ger 15 n. sp BR BRZ R d Jan n. sp BR BRZ S Paulo Chimarra 7103810249 US MD centrispina BRZ Min Ger

n. sp BR BRZ S Paulo 100 Chimarra tallawalla DC028 AUS VIC conica BRZ S Paulo Australia conica BRZ Min Ger conica BRZ Min Ger

conica BRZ Min Ger Chimarra 1503350258 US MD n. sp BR BRZ Min Ger

sp BR BRZ Min Ger froehlichi BRZ S Paulo Chimarra australica DC 225 AUS NSW froehlichi BRZ R d Jan

froehlichi BRZ R d Jan albomaculata PR

5 1 albomaculata OF PR Chimarra 3303720165 US MD gilvimacula Dre Pedernales 1 4 gilvimacula Dre Pedernales Chimarra DC072 AUS NSW braconoides OF GUY braconoides OF BRZ

braconoides OF GUY distermina BOL La Paz Solomon Isles parilis PER M d D Chimarra 4011710187 US MD patosa BOL La Paz

patosa BOL La Paz Chimarra vitapinensis IBOL NHRS PCH012 SIsl GUAD tachuela VEN MER puertoricensis DR PR

puertoricensis PR phthanorossi COL Choco Chimarra 5103810970 US MD rossi CR GUAN rossi CR ALAJ rossi AF

Chimarra gvc14602 1L AUS QUE rossi KK CR HER sp BR BRZ Min Ger odonta complex BRZ Min Ger

nr. odonta BRZ Min Ger Chimarra 9703720329 US MD odonta complex BRZ S Paulo odonta complex BRZ R d Jan

Chimarra DC026 AUS QUE nr. odonta BRZ S Paulo 9 6 odonta complex BRZ S Cat

100 odonta complex BRZ S Cat Australia odonta complex BRZ S Paulo odonta complex BRZ R d Jan Chimarra 8706310128 US MD odonta complex BRZ R d Jan

odonta BRZ R d Jan Chimarra karakara DC010 AUS QUE nr. odonta BRZ S Paulo odonta BRZ R d Jan odonta complex BRZ R d Jan

6 7 nr. odonta BRZ R d Jan Chimarra 4903810535 US MD centralis CR PUNT

centralis CR LIM minca COL MAGD Chimarra karakara RB 1700 AUS QUE peruviana BOL S Cruz

geranoides COL Cauca piliferosa BOL La Paz teresae BRZ Min Ger Chimarra 1503900938 US MD

4 7 teresae BRZ Min Ger sp BR BRZ Parana sp BR BRZ R d Jan Chimarra DC035 AUS QUE sp BR BRZ R d Jan

sp BR BRZ R d Jan mycterophora BOL La Paz camposae BRZ S Paulo Chimarra 9705200555 US MD

camposae BRZ Min Ger 9 6 camposae BRZ Min Ger 0 Chimarra karakara DC013 AUS QUE camposae BRZ Min Ger camposae BRZ Min Ger

camposae BRZ Min Ger sp BR BRZ Min Ger 7 8 Chimarra 4603810380 US MD sp BR BRZ Min Ger brasiliana BRZ S Cat parana BRZ Min Ger

Chimarra karakara KK 0015 AUS QUE parana BRZ S Cat

XZ sp BZ MPBZT BRZ Parana 0 5 XZ sp BZ MPBZT BRZ Parana

brasiliana BRZ S Cat Chimarra 4703430392 US MD cultellata BRZ Min Ger cultellata BRZ Min Ger

Chimarra karakara gvc09995 1L AUS QUE cultellata BRZ Min Ger sp BR BRZ Min Ger sp BR BRZ Min Ger sp BR BRZ Min Ger

sp BR BRZ Min Ger Chimarra 5303720951 US MD sp A SUP CONG Sud Kivu sp A SUP CONG Sud Kivu

4 1 sp A SUP CONG Chimarra karakara gvc09993 1L AUS QUE sp. SUP CONG Sud Kivu caboverdensis Cve

caboverdensis SUP CONG Sud Kivu Chimarra 4903350568 US MD uranka DC AUS WA uranka DC AUS WA 4 9 gvc L AUS QUE Chimarra karakara gvc09994 1L AUS QUE uranka AUS QUE aterrima group

gvc L AUS QUE gvc L AUS QUE uranka DC AUS QUE Chimarra 1003380282 US MD

gvc L AUS QUE 4 7 6 gvc L AUS QUE Chimarra karakara gvc09992 1L AUS QUE uranka gvc L AUS QUE uranka gvc L AUS QUE

gvc L AUS QUE htinorum THAI 9 9 megara BHU Punakha CHimarra 2703430643 US MD spinifera THAI Mae Hong Son

spinifera THAI Chiang Mai Chimarra karakara gvc09991 1L AUS QUE batukaua INDN Nusa Tenggara Barat Japan batukaua INDN Nusa Tenggara Barat batukaua INDN Bali batukaua INDN Nusa Tenggara Barat Chimarra 1203950189 US MD batukaua INDN Bali

batukaua INDN Bali suadulla THAI Chiang Mai

Chimarra OF sp JP1 10OFSI 0286 JP OKI suadulla THAI Chiang Mai

auronitens IN INDN SULA UT

auronitens IN INDN SULA UT auronitens IN INDN SULA UT Chimarra 2603720679 US MD auronitens IN INDN SULA UT auronitens IN INDN SULA UT auronitens IN INDN SULA UT Chimarra bibaringa DC006 AUS QUE auronitens IN INDN SULA UT XZ sp CN CNTLV CHIN Guangdong HM sp. INDN Sula 1 7 atara THAI Chimarra 2003720205 US MD 6 7 auronitens IN INDN SULA UT auronitens IN INDN SULA UT Chimarra MS1348 AUS QUE auronitens IN INDN SULA UT

auronitens IN INDN SULA UT

9 6 suthepensis THAI Australia burmana THAI Chimarra 5303900859 US MD lannaensis LAO

lannaensis THAI tsudai KK JP OKI Chimarra sp AV5 MS1349 AUS QUE tsudai JPTRI JP Chubu tsudai JPTRI JP Chubu

tsudai JPTRI JP Chubu 3 7 oreithyia BHU Chimarra 9403720427 US MD joliveti THAI Mae Hong Son joliveti KK THAI Lampang

Chimarra bibaringa MS1301 AUS QUE joliveti THAI Lampang joliveti THAI Lampang joliveti LAO HOU joliveti THAI Lampang

1 9 joliveti THAI Lampang Chimarra 2203430193 US MD orumbera DC AUS WA OF sp MG OFSI MAD FIAN

Chimarra bibaringa DC014 AUS QUE OF sp MG OFSI MAD FIAN maculata IBOL NHRS PCH SIsl KOL Is 4 5 maculata IBOL NHRS PCH SIsl KOL Is zagroensis IQTRA IRQ A Sul Chimarra 8506070149 US MD zagroensis IQTRA IRQ A Sul

zagroensis IQTRA IRQ A Sul adnama IN INDN SULA UT 0 Chimarra DC201 AUS QUE ad nama IN INDN SULA UT

adnama IN INDN SULA UT IN INDN SULA UT

CJG sp IN IN INDN SULA UT Chimarra aterrima 2416770494 US MD CJG sp IN IN INDN SULA UT

2 4 CJG sp IN IN INDN SULA UT CJG sp IN IN INDN SULA UT Chimarra australica DC025 AUS QUE CJG sp IN IN INDN SULA UT CJG sp IN IN INDN SULA UT CJG sp IN IN INDN 1 CJG sp IN IN INDN SULA UT Chimarra aterrima EPA0440 US MD

chiangmaiensis THAI Lampang 3 6 9 6 chiangmaiensis THAI Lampang Chimarra DC033 AUS QUE tallawalla DC AUS VIC australica DC AUS NSW

DC AUS NSW vitapinensis IBOL NHRS PCH SIsl GUAD Chimarra 2605200654 US MD gvc L AUS QUE DC AUS QUE karakara DC AUS QUE

Chimarra DC031 AUS QUE karakara AUS QUE DC AUS QUE karakara DC AUS QUE

karakara KK AUS QUE Chimarra sp MLS 8305201073 US MD karakara gvc L AUS QUE 5 6 karakara gvc L AUS QUE Chimarra DC032 AUS QUE karakara gvc L AUS QUE karakara gvc L AUS QUE

karakara gvc L AUS QUE OF sp JP OFSI JP OKI 100 bibaringa DC AUS QUE Chimarra 2903950755 US MD

Australia MS AUS QUE

sp AV MS AUS QUE

Chimarra DC198 AUS QUE bibaringa MS AUS QUE

bibaringa DC AUS QUE DC AUS QUE australica DC AUS QUE Chimarra 7703430471 US MD DC AUS QUE

DC AUS QUE DC AUS QUE

Chimarra stclairae DC005 AUS QUE DC AUS QUE

stclairae DC AUS QUE

stclairae DC AUS QUE

7 2 biramosa IBOL NHRS PCH SIsl GUAD Chimarra 1103430590 US MD biramosa IBOL NHRS PCH SIsl KOL Is

biramosa IBOL NHRS PCH SIsl KOL Is Chimarra stclairae DC007 AUS QUE biramosa IBOL NHRS PCH SIsl KOL Is biramosa IBOL NHRS PCH SIsl KOL Is

biramosa IBOL NHRS PCH SIsl KOL Is 2 9 pipake THAI Chiang Mai

pipake THAI Chiang Mai Chimarra 2503230274 US MD nr. bimbltona CN CHIN Guangxi bimbltona THAI Mae Hong Son

Chimarra biramosa IBOL NHRS PCH001 SIsl GUAD bimbltona THAI Mae Hong Son talinensis IBOL NHRS PCH SIsl KOL Is

talinensis IBOL NHRS PCH SIsl GUAD

DC AUS QUE Chimarra sp MLS 5203230356 US MD 100 amarganth UAE

Solomon Isles amarganth HM Q UAE rosavensis IBOL NHRS PCH SIsl GUAD Chimarra biramosa IBOL NHRS PCH004 SIsl KOL Is akkaorum THAI Chiang Mai akkaorum THAI Mae Hong Son akkaorum THAI Mae Hong Son akkaorum THAI Mae Hong Son Chimarra sp MLS 5503900721 US MD 6 9

akkaorum THAI Chiang Mai sp COL COL V d CAU 7 9 Chimarra biramosa IBOL NHRS PCH005 SIsl KOL Is sp COL COL V d CAU limon CR CART

limon CR CART emima VEN ZUL picea CR ALAJ Chimarra 6303950694 US MD picea CR LIM

picea CR ALAJ Chimarra biramosa IBOL NHRS PCH007 SIsl KOL Is emima CR PUNT picea CR GUAN emima CR PUNT 6 7 tapanti CR PUNT Chimarra 4605200988 US MD tapanti OF CR CART jemima CR PUNT jemima CR ALAJ Chimarra biramosa IBOL NHRS PCH008 SIsl KOL Is jemima CR CART jemima KK

jemima CR LIM 5 8 decimlobata COL V d CAU Chimarra 4303380154 US MD

decimlobata COL V d CAU limon VEN Lara paracreagra COL Cauca Chimarra biramosa IBOL NHRS PCH006 SIsl KOL Is paracreagra COL Cauca creagra VEN Lara sp VEN VEN TRUJ

sp VEN VEN Lara Chimarra 6503480141 US MD 100 creagra VE N creagra VEN MIR Chimarra pipake 08HM 326 THAI Chiang Mai creagra VEN Lara

13 creagra VEN FAL creagra VEN FAL creagra VEN FAL Chimarra 1305810948 US MD creagra VEN FAL Thailand vitapinensis IBOL NHRS PCH SIsl KOL Is babarensis IBOL NHRS PCH SIsl KOL Is

Chimarra pipake 08HM 246 THAI Chiang Mai fuscipes SAF KZN ambulans SAF W CAP

ambulans SAF E CAP THEA MX HID Chimarra sp CNW 5203950207 US MD

7 2 minuta group THEA MX HID primula OF US AZ primula OF US AZ 9 5 Chimarra nr. bimbltona 09CN 0074 CHIN Guangxi primula OF US AZ monorum THAI Chiang Mai

monorum THAI Chiang Mai 0 monorum THAI Chiang Mai Chimarra 3803170130 US MD monorum THAI Mae Hong Son 6 0 monorum THAI Mae Hong Son Chimarra bimbltona HM1211 126 THAI Mae Hong Son ridleyi OF US NM ridleyi BBTUS US AZ ridleyi US AZ

ridleyi BBTUS US MI Chimarra 1003230489 US MD angustipennis US AZ angustipennis OF US TX

angustipennis OF US AZ Chimarra bimbltona 08HM 103 THAI Mae Hong Son*** angustipennis OF US TX 14 angustipennis VEN ZUL

angustipennis VEN POR monticola DC AUS NSW Chimarra 6103350439 US MD australica DC AUS NSW

8 3 australica DC AUS QUE Solomon Isles Chimarra talinensis IBOL NHRS PCH023 SIsl KOL Is PNGTR PNG MAD PNGTR PNG MAD OF sp PNG PNGTR PNG MAD

OF sp PNG OFSI PNG MAD ventrospina IBOL NHRS PCH SIsl KOL Is Chimarra aterrima 5916370154 US MD

adelphe CR PUNT adelphe CR PUNT

Chimarra talinensis IBOL NHRS PCH022 SIsl GUAD adelphe CR PUNT bauerfielda bauerfielda IBOL NHRS PCH VANU Efateerfielda

bauerfielda bauerfielda IBOL NHRS PCH VANU Efateerfielda Solomon Isles bauerfielda vanua IBOL NHRS PCH VANU Es SANua Chimarra sp CNW 7705200332 US MD bauerfielda vanua IBOL NHRS PCH VANU MALua 2 bauerfielda bauerfielda IBOL NHRS PCH VANU Es SANerfielda

malaculensis IBOL NHRS PCH VANU MAL

Chimarra DC 200 AUS QUE malaculensis IBOL NHRS PCH VANU MAL bauerfielda bauerfielda IBOL NHRS PCH VANU Es SANerfielda

0 bauerfielda bauerfielda IBOL NHRS PCH VANU Es SANerfielda butmasensis IBOL NHRS PCH VANU Es SAN Chimarra 9203810633 US MD

butmasensis IBOL NHRS PCH VANU Es SAN 6 solomoensis IBOL NHRS PCH SIsl KOL Is United Arab Emirates 100 Chimarra amarganth 08HM 024 UAE solomoensis IBOL NHRS PCH SIsl KOL Is solomoensis IBOL NHRS PCH SIsl KOL Is solomoensis IBOL NHRS PCH SIsl KOL Is solomoensis IBOL NHRS PCH SIsl KOL Is solomoensis IBOL NHRS PCH SIsl GUAD Chimarra 8303950528 US MD

solomoensis IBOL NHRS PCH SIsl KOL Is protuberans BOL La Paz Chimarra amarganth HM09Q30 UAE rhamphodes BOL La Paz

rhamphodes BOL La Paz uara BRZ Min Ger uara BRZ Min Ger Chimarra 6503900610 US MD Solomon Isles uara BRZ Min Ger

uara BRZ Min Ger elia OF US TX Chimarra rosavensis IBOL NHRS PCH024 SIsl GUAD elia OF US NV gibba CR GUAN

gibba CR GUAN

lata CR GUAN Chimarra 9703900282 US MD

dudosa PAN S Blas munozi CR HER

Thailand Chimarra akkaorum 08HM 244 THAI Chiang Mai munozi CR ALAJ 100 OF sp MG OFSI MAD FIAN beameri OF US TX flinti VEN Lara flinti VEN FAL Chimarra aterrima 08 SWRC 1483 US PA flinti VEN Sucre flinti VEN ZUL 0 Chimarra akkaorum 08HM 098 THAI Mae Hong Son*** flinti CR GUAN

26 flinti CR LIM sp COL COL Cauca poolei VEN FAL Chimarra aterrima 08 SWRC 1618 US PA poolei VEN ARA spangleri CR PUNT 6 0 spangleri CR ALAJ Chimarra akkaorum HM1211 143 THAI Mae Hong Son*** spangleri CR GUAN

spangleri CR LIM

adamsae BRZ Min Ger adamsae BRZ Parana Chimarra aterrima 08 SWRC 1491 US PA

adamsae BRZ S Paulo 5 4 adamsae PER M d D 25 sp BOL BOL La Paz Chimarra akkaorum HM1211 57 THAI Mae Hong Son sp BOL BOL La Paz amica CR GUAN

0 amica CR GUAN alata CR GUAN Chimarra aterrima 08 SWRC 0912 US PA dentosa CR GUAN

sp BR BRZ S Paulo 2 7 Chimarra akkaorum 08HM 323 THAI Chiang Mai sp BR BRZ Min Ger duckworthi COL MAGD

duckworthi CR GUAN

duckworthi CR GUAN Chimarra aterrima 08 SWRC 1163 US PA bidens OF GUY caribea OF Tr&To Columbia 100 caribea OF GREN Chimarra sunima COL RB 2515 COL V d CAU caribea OF GREN

caribea OF GREN virgencita CR CART virgencita OF CR ALAJ Chimarra aterrima 08 SWRC 1619 US PA

virgencita CR CART longiterga CR PUNT

Chimarra sunima COL RB 2516 COL V d CAU longiterga CR GUAN ortiziana CR PUNT paraortiziana NIC Esteli colmillo CR GUAN peineta CR PUNT Chimarra 9003230641 US MD

peineta CR GUAN

100 pollex OF CR ALAJ Chimarra limon RB 2099 CR CART pollex CR GUAN

pollex CR GUAN villalobosi CR PUNT wilcuma COL MAGD Chimarra aterrima 08 SWRC 0914 US PA 4 4 wilcuma COL MAGD wilcuma VEN Lara 1 villalobosi CR PUNT

Chimarra limon RB 0599 CR CART wilcuma VEN Lara n. sp VE VEN Sucre platyrhina VEN FAL platyrhina VEN Lara Chimarra 5103230157 US MD

platyrhina VEN Lara platyrhina VEN GUA platyrhina VEN GUA Chimarra emima RB 0582 VEN ZUL Costa Rica/Venezuela platyrhina VEN GUA 5 5 ruficeps DR SAF KZN vanuatensis IBOL NHRS PCH VANU Es SAN

vanuatensis IBOL NHRS PCH VANU Es SAN Chimarra 6303950407 US MD 9 6 vanuatensis IBOL NHRS PCH VANU MAL vanuatensis IBOL NHRS PCH VANU MAL

Chimarra picea RB 2111 CR ALAJ vanuatensis IBOL NHRS PCH VANU MAL veveensis IBOL NHRS PCH SIsl KOL Is

veveensis IBOL NHRS PCH SIsl KOL Is

kolombangensis IBOL NHRS PCH SIsl KOL Is Chimarra 2503720713 US MD kolombangensis IBOL NHRS PCH SIsl KOL Is kolombangensis IBOL NHRS PCH SIsl KOL Is kolombangensis IBOL NHRS PCH SIsl GUAD 5 4 Chimarra picea RB 0609 CR LIM kolombangensis IBOL NHRS PCH SIsl KOL Is kolombangensis IBOL NHRS PCH SIsl KOL Is 9 7 kolombangensis IBOL NHRS PCH SIsl KOL Is

kolombangensis IBOL NHRS PCH SIsl KOL Is Chimarra 7311740375 US MD falculata ARChf US FL falculata FL US FL falculata ARChf c US FL 7 4 Chimarra picea RB 0608 CR ALAJ 0 falculata ARChf b US FL florida FL US FL florida US LA florida FL US FL Chimarra sp MLS 6203430927 US MD florida FL US FL florida FL US FL Chimarra emima RB 1691 CR PUNT florida OF US MS

9 8 florida OF US MS socia FormTOexpt CAN NBR

socia NBEPT CAN NBR Chimarra 6205200237 US MD socia ON CAN ONT picea group socia HIMXD US NC socia US MN

Chimarra picea RB 0611 CR GUAN socia NBEPT CAN NBR socia US NJ 100 socia NBEPT CAN NBR socia ON CAN ONT Chimarra aterrima 07 17PKS 0115 US VA

socia FormTOexpt CAN NBR 2 5 5 4 socia NBEPT CAN NBR 2 6 socia EPA CAN ONT Chimarra emima RB 2079 CR PUNT socia NBEPT CAN NBR socia EPA US MD

socia PKS US KY 3 0 socia US MN 6 1 Chimarra 2603950838 US MD socia US MN

socia US MN Chimarra tapanti RB 0629 CR PUNT socia US MN

socia PROBE CAN MAN socia NBEPT CAN NBR socia NBEPT CAN NBR 3 4 Chimarra aterrima 07 17PKS 0065 US KY socia FormTOexpt CAN NBR socia NBEPT CAN NBR socia NBEPT CAN NBR Chimarra tapanti 10OF 309 CR CART socia NBEPT CAN NBR

Costa Rica socia FormTOexpt CAN NBR augusta OF US NC augusta OF US VA Chimarra aterrima EPA0441 US VA augusta GSM US TN

augusta US TN feria OF US TX 3 7 Chimarra jemima RB 0580 CR PUNT feria OF US TX feria US MN 9 feria US MN feria KK US MN Chimarra aterrima RB 0553 US VA

feria AF aterrima ARCha US FL 7 7 9 7 Chimarra jemima RB 0595 CR ALAJ aterrima BB CAN NFL 3 1 aterrima US NJ aterrima CR US SC aterrima US NJ Chimarra aterrima 07 17PKS 0552 US AL aterrima CB CAN NBR aterrima NBEPT CAN NBR

aterrima CB CAN NBR Chimarra jemima RB 2497 CR CART US MD US MD US MD

US MD Chimarra aterrima 3216770542 US MD

US MD 5 5 US MD

US MD Chimarra jemima KK 0392 US MD

US MD

US MD 7 9 US MD Chimarra aterrima 7116770191 US MD US MD US MD 1 4 Chimarra jemima RB 2095 CR LIM US MD US MD US MD

US MD Chimarra sp CNW 3403950902 US MD 100 US MD

US MD

US MD Chimarra decimlobata RB 0576 COL V d CAU US MD

US MD

US MD

US MD Chimarra 3903810885 US MD US MD US MD Chimarra decimlobata RB 1695 COL V d CAU aterrima US MD aterrima EPA US MD US MD

sp MLS US MD US MD Chimarra 5903110345 US MD

US MD

US MD 9 1 Chimarra c.f. limon RB 0597 VEN Lara*** US MD sp MLS US MD sp MLS US MD US MD Chimarra 9703430768 US MD US MD 9 2 US MD 1 4 US MD Columbia/Venezuela Chimarra paracreagra RB 0603 COL Cauca US MD sp CNW US MD

22 US MD US MD Chimarra 6203900389 US MD US MD

aterrima US MD Chimarra paracreagra RB 1702 COL Cauca sp CNW US MD US MD US MD US MD

8 6 US MD Chimarra 8303900470 US MD aterrima SWRC US PA

aterrima SWRC US PA 4 1 Chimarra creagra RB 0567 VEN Lara aterrima SWRC US PA aterrima SWRC US PA aterrima SWRC US PA

aterrima SWRC US PA Chimarra aterrima EPA0604 US MD US MD 0 aterrima SWRC US PA 100 US MD Chimarra inchoata VEN RB 1710 VEN TRUJ US MD US MD US MD

sp MLS US MD Chimarra 7803810772 US MD US MD aterrima PKS US VA

US MD 4 7 Chimarra inchoata VEN RB 2514 VEN Lara aterrima PKS US KY aterrima EPA US VA aterrima US VA

aterrima PKS US AL Chimarra 1011740161 US MD aterrima US MD 0 aterrima US MD Chimarra creagra RB 0565 VEN sp CNW US MD US MD US MD US MD Chimarra 7905200808 US MD US MD

US MD aterrima EPA US MD Chimarra creagra RB 0564 VEN MIR US MD US MD 6 0 US MD US MD Chimarra 9305810340 US MD 6 9 US MD antigua MX NL

Chimarra creagra RB 0568 VEN Lara antigua MX NL utahensis OF US AZ utahensis US AZ 3 0 utahensis OF US AZ utahensis OF US CO Chimarra 3003950315 US MD

9 3 utahensis US SD siva DR US AZ Chimarra creagra RB 0572 VEN FAL schiza MX NL Mexico schiza MX NL adella MX CHI 100 adella MX CHI Chimarra antigua RB 1688 MX NL DC AUS QUE “primula” group neboissi AUS QUE

neboissi DC AUS QUE

Chimarra creagra RB 0571 VEN FAL DC AUS QUE

neboissi DC AUS QUE marginata ESP C L Man

marginata ESP C L Man Chimarra antigua RB 2487 MX NL marginata ESP C L Man 9 2 marginata ESP C L Man

marginata ESP C L Man Chimarra creagra RB 0575 VEN FAL marginata NOR HOR marginata ESP C L Man marginata BC ZSM AQU GER Bavaria U.S. Arizona, Colorado, S.Dakota 8 4 marginata POR Chimarra utahensis 08OF 0858 US AZ argentinica BOL S Cruz 100

argentinica BOL S Cruz Chimarra creagra RB 0569 VEN FAL obscura US MN Solomon Isles obscura US NJ

obscura ON CAN ONT obscura PKS US VA 4 Chimarra utahensis RB 0633 US AZ obscura ATETH US MI

obscura US MN obscura ELEPT CAN ONT

Chimarra vitapinensis IBOL NHRS PCH013 SIsl KOL Is obscura ELEPT CAN ONT US MD US MD 5 9 obscura EPA US MD Chimarra utahensis 08OF 0861 US AZ obscura ELEPT CAN ONT obscura ELEPT CAN ONT

Solomon Isles/S. Africa 5 0 Chimarra babarensis IBOL NHRS PCH025 SIsl KOL Is obscura gseptW CAN ONT US MD US MD 4 9 3 0

US MD obscura ATETH US MI Chimarra utahensis 08OF 0860 US CO obscura ATETH US MI obscura ELEPT CAN ONT Chimarra fuscipes RB 0593 SAF KZN*** obscura ELEPT CAN ONT 5 7 obscura ELEPT CAN ONT utahensis group obscura ON CAN ONT obscura AVMTT CAN QUE Chimarra utahensis RB 0635 US SD obscura ON CAN ONT 9 9 20 obscura PKS US VA 0 US MD S. Africa Chimarra ambulans RB 0559 SAF W CAP*** US MD 18 obscura EPA CAN ONT

obscura ELEPT CAN ONT Mexico obscura US MN Chimarra siva DR 0810 36 US AZ (suspected misidentification )

obscura ELEPT CAN ONT obscura ELEPT CAN ONT Chimarra ambulans RB 0558 SAF E CAP*** obscura ON CAN ONT obscura ELEPT CAN ONT

obscura ON CAN ONT obscura ELEPT CAN ONT 9 3 obscura ON CAN ONT Chimarra schiza RB 0623 MX NL

obscura ELEPT CAN ONT 9 9

100 obscura ELEPT CAN ONT

Chimarra 10THEA 242 MX HID obscura ELEPT CAN ONT 1 19 obscura ELEPT CAN ONT

obscura ELEPT CAN ONT obscura PKS US TN Chimarra schiza RB 0622 MX NL obscura ELEPT CAN ONT 9 3

0 100 obscura ELEPT CAN ONT obscura ELEPT CAN ONT

Chimarra 10THEA 642 MX HID obscura PKS US KY U.S. Arizona/Mexico obscura ELEPT CAN ONT

obscura ELEPT CAN ONT obscura PKS US TN Chimarra adella RB 1685 MX CHI

obscura EPA US TX

“primula” group obscura PKS US TN obscura INHST US IL 7 1 Chimarra primula 08OF 0842 US AZ 6 2 obscura ELEPT CAN ONT obscura PKS US TN

obscura ON CAN ONT obscura ATETH US MI 0 Chimarra adella RB 0556 MX CHI obscura FL US FL

obscura ATETH US MI Chimarra primula 08OF 0840 US AZ obscura ELEPT CAN ONT obscura ELEPT CAN ONT obscura ELEPT CAN ONT obscura ELEPT CAN ONT Chimarra DC 199 AUS QUE 7 9 obscura ELEPT CAN ONT obscura US MN Australia obscura ELEPT CAN ONT Chimarra primula 08OF 0841 US AZ obscura ELEPT CAN ONT 100

obscura ELEPT CAN ONT obscura ELEPT CAN ONT 5 3

obscura US MN Chimarra neboissi RB 1701 AUS QUE*** obscura ELEPT CAN ONT obscura ELEPT CAN ONT 9 7 obscura ELEPT CAN ONT Chimarra monorum 08HM 322 THAI Chiang Mai 16 0 obscura ON CAN ONT

obscura ELEPT CAN ONT obscura gseptAC CAN ONT Chimarra neboissi DC009 AUS QUE obscura ELEPT CAN ONT 4 0 Thailand 9 9 Chimarra monorum 08HM 321 THAI Chiang Mai obscura ELEPT CAN ONT Chimarra monorum 08HM 243 THAI Chiang Mai . 5 6 Chimarra DC034 AUS QUE 2 8 100 Chimarra monorum 08HM 095 THAI Mae Hong Son*** 24 Chimarra neboissi DC 194 AUS QUE Chimarra monorum HM1211 116 THAI Mae Hong Son Spain/Portugal/Germany/Norway 4 1 Chimarra marginata 08HM 115 ESP C L Man 5 U.S. Arizona N. Mexico Michigan 9 9 Chimarra ridleyi 08OF 0845 US NM 0 100 Chimarra marginata 07HM 0255 ESP C L Man 0 8 5 Chimarra ridleyi 09BBTUS 148 US AZ Chimarra marginata 07HM 0260 ESP C L Man 5 1 Chimarra marginata 07HM 0256 ESP C L Man 6 4 Chimarra ridleyi RB 0634 US AZ 3 3 Chimarra marginata 07HM 0258 ESP C L Man 2 2 Chimarra ridleyi 09BBTUS 142 US MI angustipennis group 4 Chimarra marginata RB 1351 NOR HOR 17 9 5 Chimarra angustipennis RB 2123 US AZ 3 0 Chimarra marginata 07HM 0261 ESP C L Man U.S. Texas Arizona/Venezuela 9 5 6 2 Chimarra angustipennis 08OF 0827 US TX 7 0 Chimarra marginata BC ZSM AQU 00584 GER Bavaria Chimarra angustipennis 08OF 0824 US AZ*** 23 2 7 1 Chimarra marginata HM 0810 68 POR Chimarra angustipennis 08OF 0825 US TX Bolivia 100 4 5 9 9 Chimarra angustipennis RB 2066 VEN ZUL Chimarra argentinica RB 2445 BOL S Cruz Chimarra angustipennis RB 0560 VEN POR Chimarra argentinica RB 2446 BOL S Cruz Australia Chimarra monticola DC011 AUS NSW Chimarra obscura RB 2116 US MN 1 6 9 9 Chimarra obscura RB 1498 US NJ 9 3 Chimarra australica DC066 AUS NSW 9Chimarra7 obscura 07ON 0087 CAN ONT Chimarra australica DC027 AUS QUE 1 Papua New Guinea 100 Chimarra 10PNGTR 092 PNG MAD Chimarra obscura 07 17PKS 0113 US VA 0 Chimarra 10PNGTR 089 PNG MAD Chimarra obscura ATETH 001 US MI 2 2 7 6 Chimarra obscura RB 0602 US MN 3 8 Chimarra OF sp PNG1 10PNGTR 094 PNG MAD U.S/Canada 100 Chimarra obscura 07ELEPT 005 CAN ONT Solomon Isles Chimarra OF sp PNG1 10OFSI 0285 PNG MAD Chimarra obscura 07ELEPT 083 CAN ONT 0 Chimarra ventrospina IBOL NHRS PCH009 SIsl KOL Is 0 1 0 Costa Rica 100 Chimarra adelphe RB 1686 CR PUNT Chimarra 1505810748 US MD Chimarra adelphe RB 0557 CR PUNT Chimarra 2505810564 US MD 4 6 Chimarra adelphe RB 2485 CR PUNT Chimarra obscura EPA0446 US MD 2 Chimarra bauerfielda bauerfielda IBOL NHRS PCH046 VANU Efateerfielda Chimarra obscura 07ELEPT 043 CAN ONT 8 8 Chimarra bauerfielda bauerfielda IBOL NHRS PCH038 VANU Efateerfielda 4 4 Chimarra obscura 07ELEPT 291 CAN ONT Vanuatu/Solomon Isles 9 9 Chimarra bauerfielda vanua IBOL NHRS PCH039 VANU Es SANua Chimarra obscura gseptW2 CAN ONT 9 5 9 2 Chimarra 2003110231 US MD Chimarra bauerfielda vanua IBOL NHRS PCH041 VANU MALua Chimarra 7110450443 US MD 2 3 8 2 Chimarra bauerfielda bauerfielda IBOL NHRS PCH044 VANU Es SANerfielda 8 5 Chimarra malaculensis IBOL NHRS PCH036 VANU MAL Chimarra 1305810451 US MD 9 7 Chimarra malaculensis IBOL NHRS PCH042 VANU MAL Chimarra obscura ATETH 002 US MI 2 3 Chimarra bauerfielda bauerfielda IBOL NHRS PCH047 VANU Es SANerfielda 5 8 Chimarra obscura ATETH 017 US MI 7 9 Chimarra bauerfielda bauerfielda IBOL NHRS PCH045 VANU Es SANerfielda 2 Chimarra obscura 07ELEPT 098 CAN ONT 9 8 5 3 Chimarra obscura 07ELEPT 463 CAN ONT 7 Chimarra butmasensis IBOL NHRS PCH037 VANU Es SAN 4 8 Chimarra obscura 07ELEPT 254 CAN ONT 2 6 Chimarra butmasensis IBOL NHRS PCH043 VANU Es SAN 2 6 7 4 Chimarra obscura 07ON 0121 CAN ONT 8 6 Chimarra solomoensis IBOL NHRS PCH029 SIsl KOL Is Chimarra solomoensis IBOL NHRS PCH028 SIsl KOL Is Chimarra obscura 09AVMTT 062 CAN QUE 5 3 Chimarra solomoensis IBOL NHRS PCH031 SIsl KOL Is Chimarra obscura 07ON 0086 CAN ONT 5 7 Chimarra solomoensis IBOL NHRS PCH026 SIsl KOL Is Chimarra obscura 07 17PKS 0114 US VA 6 5 Chimarra solomoensis IBOL NHRS PCH032 SIsl KOL Is 4 9 Chimarra 6607740263 US MD 4 5 100 Chimarra 9705810690 US MD Chimarra solomoensis IBOL NHRS PCH033 SIsl GUAD Chimarra obscura EPA0442 CAN ONT Chimarra solomoensis IBOL NHRS PCH027 SIsl KOL Is Chimarra obscura 07ELEPT 095 CAN ONT Bolivia 5 6 Chimarra protuberans RB 2311 BOL La Paz*** 40 100 Chimarra rhamphodes RB 2309 BOL La Paz bidentata group 4 4 Chimarra obscura RB 0601 US MN Chimarra rhamphodes RB 2308 BOL La Paz *** 39 Chimarra obscura 07ELEPT 234 CAN ONT Brazil Chimarra uara RB 2505 BRZ Min Ger Chimarra obscura 07ELEPT 116 CAN ONT 100 Chimarra uara RB 2504 BRZ Min Ger Chimarra obscura 07ON 0120 CAN ONT 5 3 Chimarra uara RB 0631 BRZ Min Ger “poolei” group Chimarra obscura 07ELEPT 134 CAN ONT 6 5 Chimarra uara RB 2511 BRZ Min Ger Chimarra obscura 08ON 0518 CAN ONT U.S./Costa Rica 4 2 Chimarra elia 08OF 0834 US TX Chimarra obscura 07ELEPT 078 CAN ONT Chimarra elia 08OF 0835 US NV Chimarra obscura 07ON 0088 CAN ONT 9 2 9 4 Chimarra gibba RB 1693 CR GUAN elia group Chimarra obscura 07ELEPT 465 CAN ONT Chimarra gibba RB 2494 CR GUAN Chimarra obscura 07ELEPT 390 CAN ONT 1 1 Costa Rica/Panama 9 5 Chimarra lata RB 2503 CR GUAN Chimarra obscura 07ELEPT 062 CAN ONT Chimarra dudosa RB 3005 PAN S Blas Chimarra obscura 07ELEPT 435 CAN ONT 0 Costa Rica 9 9 Chimarra obscura 07ELEPT 453 CAN ONT 3 5 Chimarra munozi RB 1697 CR HER Chimarra obscura 07 17PKS 0334 US TN 4 1 Madagascar Chimarra munozi RB 0598 CR ALAJ Chimarra obscura 07ELEPT 381 CAN ONT 3 9 Chimarra OF sp MG 10OFSI 0287 MAD FIAN “beameri” group Chimarra obscura 07ELEPT 165 CAN ONT 3 7 U.S. Chimarra beameri 08OF 0830 US TX Chimarra obscura 07ELEPT 014 CAN ONT Venezuela/Costa Rica 8 5 Chimarra flinti RB 0590 VEN Lara*** (except 10OFSI 0287 Chimarra flinti RB 0589 VEN FAL 32 Chimarra obscura 07 17PKS 0023 US KY 2 7 Chimarra flinti RB 2102 VEN Sucre Chimarra obscura 07ELEPT 158 CAN ONT 1 7 6 0 Chimarra flinti RB 0588 VEN ZUL Madagascar) Chimarra obscura 07ELEPT 426 CAN ONT 9 9 Chimarra flinti RB 0591 CR GUAN Chimarra obscura 07 17PKS 0333 US TN 0 Columbia Chimarra flinti RB 1699 CR LIM Chimarra obscura EPA0444 US TX Chimarra cauca COL RB 2518 COL Cauca Chimarra obscura 07 17PKS 0330 US TN 2 3 Venezuela Chimarra poolei RB 0619 VEN FAL*** Chimarra obscura 08INHST 070 US IL 9 9 Chimarra poolei RB 0620 VEN ARA 33 Chimarra obscura 07ELEPT 030 CAN ONT Costa Rica Chimarra spangleri RB 0628 CR PUNT Chimarra obscura 07 17PKS 0331 US TN 8 9 6 9 5 Chimarra spangleri RB 2140 CR ALAJ Chimarra obscura 08ON 0327 CAN ONT Chimarra spangleri RB 0626 CR GUAN Chimarra obscura ATETH 010 US MI 6 5 Chimarra spangleri RB 2136 CR LIM Chimarra obscura 08FL 050 US FL 8 9 3 Chimarra adamsae RB 2482 BRZ Min Ger Chimarra obscura ATETH 016 US MI Chimarra adamsae RB 2483 BRZ Parana Chimarra obscura 07ELEPT 016 CAN ONT Brazil/Peru/Bolivia 9 5 5 9 Chimarra adamsae RB 2484 BRZ S Paulo*** Chimarra obscura 07ELEPT 130 CAN ONT 1 Chimarra adamsae RB 2481 PER M d D 37 Chimarra obscura 07ELEPT 151 CAN ONT 7 2 Chimarra desirae BOL RB 2520 BOL La Paz*** Chimarra obscura 07ELEPT 207 CAN ONT 9 4 Chimarra desirae BOL RB 2519 BOL La Paz 38 Chimarra obscura 07ELEPT 099 CAN ONT 9 9 Chimarra obscura RB 2115 US MN Costa Rica Chimarra amica RB 2486 CR GUAN Chimarra obscura 07ELEPT 318 CAN ONT Costa Rica Chimarra amica RB 1687 CR GUAN 0 Chimarra alata RB 1689 CR GUAN “alata” group Chimarra obscura 07ELEPT 448 CAN ONT Costa Rica Chimarra dentosa RB 3003 CR GUAN Chimarra obscura 07ELEPT 441 CAN ONT 4 8 Brazil 100 Chimarra calori BR RB 2513 BRZ S Paulo*** 35 Chimarra obscura 07ELEPT 257 CAN ONT 2 5 Chimarra obscura RB 0600 US MN Chimarra calori BR RB 2512 BRZ Min Ger Chimarra obscura 07ELEPT 289 CAN ONT 1 4 8 3 Columbia/Costa Rica 9 8 Chimarra duckworthi RB 1690 COL MAGD 36 Chimarra obscura 07ELEPT 430 CAN ONT 100 Chimarra duckworthi RB 0578 CR GUAN 9 7 Chimarra obscura 07ELEPT 450 CAN ONT 6 5 Chimarra duckworthi RB 2161 CR GUAN Guyana Chimarra bidens 10OF 313 GUY Chimarra obscura 07ON 0117 CAN ONT 9 1 Trinidad & Tobago bidens group Chimarra obscura 07ELEPT 109 CAN ONT 6 9 3 Chimarra caribea 10OF 312 Tr&To Chimarra obscura gseptAC1 CAN ONT 8 4 Chimarra caribea 10OF 085 GREN Chimarra Grenada Chimarra obscura 07ELEPT 217 CAN ONT 5 0 Chimarra caribea 10OF 084 GREN Costa Rica 100 Chimarra virgencita RB 2507 CR CART Chimarra caribea 10OF 086 GREN Chimarra obscura 07ELEPT 057 CAN ONT 6 1 Chimarra virgencita 10OF 308 CR ALAJ Chimarra virgencita RB 0638 CR CART 1 1 Costa Rica 9 8 Chimarra longiterga RB 1704 CR PUNT Costa Rica Chimarra longiterga RB 2499 CR GUAN 0.2 2 7 Chimarra ortiziana RB 0617 CR PUNT Chimarra paraortiziana RB 0604 NIC Esteli bidens lineage 2 5 Costa Rica Chimarra colmillo RB 0574 CR GUAN 1 6 9 0 Chimarra peineta RB 2500 CR PUNT Chimarra peineta RB 1696 CR GUAN 1 0 2 4 9 6 Chimarra pollex 10OF 310 CR ALAJ Chimarra pollex RB 1703 CR GUAN 4 5 Chimarra pollex RB 0618 CR GUAN 1 0 Chimarra villalobosi RB 0637 CR PUNT Costa Rica/Columbia/Venezuela 9 0 100 Chimarra wilcuma RB 1705 COL MAGD Chimarra wilcuma RB 1706 COL MAGD 5 0 Chimarra wilcuma RB 2508 VEN Lara “ortiziana” 5 7 Chimarra villalobosi RB 0636 CR PUNT 6 9 5 0 Chimarra wilcuma RB 2509 VEN Lara group Chimarra onchyrhina VE RB 1711 VEN Sucre Venezuela 9 8 9 1 Chimarra platyrhina RB 0615 VEN FAL*** 34 Chimarra platyrhina RB 0616 VEN Lara 9 6 9 7 Chimarra platyrhina RB 0639 VEN Lara Chimarra platyrhina RB 2117 VEN GUA 5 9 Chimarra platyrhina RB 0614 VEN GUA Fig. ES1B 0 9 9 Chimarra platyrhina RB 2118 VEN GUA #NEXUS Begin data; Dimensions ntax=90 nchar=1199; Format datatype=dna symbols="1234567890" interleave gap=- interleave; Matrix [ 14 15 18a 18b 18c 19 19a 20 18c' 18b' 18a' 21 14' 4' ] Unaligned[columns under numerals were excludedπ] 111111111)11|1111|11(nnnnnnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnnnnnnnnnn|nnnnnnnn|nnnnnnnnn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_akkaorum_08HMCAD_099 ------)--|----|--(-----gaattccGCGg -cctCa-CGGGCCGCC-GGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----tTAT|CGCGCGGt|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CATAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_akkaorum_HMTRI_098 ------)--|----|--(------atncngcgg tsNTCa-CGGgcCGCC-GGA-aATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CATAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_monorum_HMTRI_095 ------)--|----|--(------atncngcgG -tCTCA-CGGGCCGCC-GGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CATAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCTC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_ambulans_RBCAD_0559 ------)--|----|--(--nnnnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_ambulans_RBCAD_0558 ------)--|----|--(----nnnnnnnnnnnn nnnn---nnnnnnnct-gaa-aATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGt|T------TT|CGGCGCCCTGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CATAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAgAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CgAgACC|GATAGCGAACA Chimarra_augusta_RBCAD_0553 ------)--|----|--(--nnnnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_augusta_RBCAD_0554 ------)--|----|--(--nnnnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_fuscipes_RBCAD_0593 ------)--|----|--(-----nnnnnnnnnnn nnnn---nnnGAGcCG-GGA-AATGTAGcGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_fuscipes_RBCAD_0593 ------)--|----|--(-----nnnnnnnnnnn nnnn---nnnGAGCCG-GGa-aATGTAGcgT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_angustipennis_08OFCAD_0824 ------)--|----|--(------nnnnnnnnn nnca---CGNNGNgcc-GGA-aATgtAGCGT)TC|GGGAGGAGGA|tGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CATAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_limon_RBCAD_0597 ------)--|----|--(------nnnnnnnnn cacg---ctgagcgcg-tGA-naTGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CNNGCGGT|T------TT|CGGCGCCCTGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_aterrima_RBCAD_1500 ------)--|----|--(------gcggG tTCTCA-CGAGCCGCC-GGA-AATGTAGCGT)TT|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_duckworthi_RBCAD_0579 ------)--|----|--(--nnnnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_centralis_UMC286_1W_Poor ------)--|----|--(------nnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_chiangmaiensis_1W_08HMCAD_245 ------)--|----|--(------nnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_flinti_RBCAD_0590_D2mid_1W ------)--|----|--(------nnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_suadulla_08HMCAD_247 ------)--|---n|nn(nnnnnnnnnnnnnnnn nnnn---nnnnnnnnn-GGA-AATGTAgcgT)Tc|GGGAGGAGGA|tGTCAA----TNNT|NNGCGCGG|T-----NNT|CGGCGcCCAgTC|CAA(gTTCaTCTTGAAAGGGGC)CCCgCTTA|TC|(Cacag)A(GGGtGCCa|gG|CCC)GtAGC|GACGGGcgccg||GCCGCGACG|T|TCCTCTTCCC|CAgAGTC(GGGtTGcTTGAGAGTGCAGCCC)TAAGC(GGGTGGtAAACTCCATC)TAA|GGCT|AAATACGC|CCA-CGAGACC|GATAGCGAACA Chimarra_joliveti_08HMCAD_242 GAA-CGGGA)ag|AGCC|CA(GcgctgAanTCcGCGG tcCGA--CGGGCCGCCGGGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|T|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGC|CCA-CGAGACC|GATAGCGAACA Chimarra_lannaensis_HMCAD_105_D1_2_1W ------)--|----|--(------nnnnnnnnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnC|CAA(GTTCrTCTTGaAAGGggc)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|mCC)GTAGC|GACGGgcGCCG||GCCGCGAcG|T|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCcAtC)TAA|GGmT|AAATACGC|CCA-CGAGACC|GAtAGCGAACA Chimarra_oreithyia_08HMCAD_227 ------)--|----|--(-cgctganntcngcGg tccGA--CGGGCCGCCGGGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|T|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGC|CCA-CGAGACC|GATAGCGAACA Chimarra_tsudai_PHIL_CT1 GAAACGGGA)AG|AGCC|CA(GCGCTGAATTCCGCGG TCCTCA-CGGGCCGCCGGGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|T|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGC|CCA-CGAAACC|GATAGCGAACA Chimarra_megara_08HMCAD_226 ------)--|----|--(-cgctgAnTtCnGCGG TCcTCA-CGGGCCGCCGGGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|T|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGC|CCA-CGAGACC|GATAGCGAACA Chimarra_spinifera_08HMCAD_241_1W ------)--|----|--(--nnnnnnnnnnnnnn nnnnnn-nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n-----nnn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_poolei_RBCAD_0619_D2mid_1W ------)--|----|--(------nnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_uranka_RBCAD_0632 ------)--|----|--(------TCcgcgg tccTCA-CGggccGCC-GgA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|C-----TTC|CGGCGCCCAGTC|CAA(GTCCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGCAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_protuberans_RBCAD_2310 ------)--|----|--(------gcC-gGa-AatGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCTGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_rhamphodes_RBCAD_2308 ------)--|----|--(------aGcC-gga-aaTGTAGCGT)TC|GGGAGGAGGA|NGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCTGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_adamsae_RBCAD_2484 ------)--|----|--(----nnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_desirae_RBCAD_2520 [sp_1_BOL] ------)--|----|-n(nnnnnnnnnnnnnnnn nnnn---nnnnAgcCG-GGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_platyrhina_RBCAD_0615 ------)--|----|--(------nnnnnnnnn nnnn---nnnnnnnnn-nnA-AATGTAGCGT)tc|GGGAGGAGGA|tgTCAA----TtAT|CGCGCgGT|T------TT|CGGCGCCCtgTC|CAA(GTTCaTCTTGAAAGGGGC)CCCGcTTA|TC|(CATAG)A(GGGTgCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGACG|g|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCTC)TAAGt(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGaCC|GATAGCGAACA Chimarra_villalobosi_RBCAD_0636_1W ------)--|----|--(-nnnnnnnnnnnnnnn nnnnn--nnnnnnnnn-nna-gatgtagCNT)TT|GgNN-NAgga|tgtCaA----TTat|cNCNNNNN|------NNN|cggcGCccTGtc|caA(GtTCATCtTkaaaGGGGc)CCCGctta|tc|(catAG)A(GGgtGCCA|GG|CCC)GTAGc|gacggGCGCCG||GCCGCgAcG|g|tCCTCTTCCC|CAGAGTC(gGgttgcttGAkAGTGcAGcTC)TAAgC(GGgtGGTAAACTCCaTC)TAa|gGCT|AAAtACgA|CCA-CGAGACC|gatagcgAAcA Chimarra_obscura_PHIL_R5 GAAACGGGA)AG|AGCC|CA(GCGCTGAATTCCGCGG TCCTCR-CGGGCCGCC-GGAAAATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|C------TC|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGCAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_socia_RBCAD_1497 ------)--|----|--(--gctganttccgCGg tCCTCA-CGGGCCGCC-GGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_socia_08NBEPT_0005 ------)--|----|--(------aattcCgcGG tCCTCa-CGGGCCGCC-GGA-aATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_neboissi_RBCAD_1701 ------)--|----|--(gcgctgantnccgcGg N-ctCA-CGggcCGCC-GGA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|C------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGCAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_sp_1_BR_RBCAD_2513 ------)--|----|--(nnnnnnnnnnnnnnng tcctcA-CGGGcmGCC-Gga-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|C------TT|CGGCGCCCTGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_feria_PHIL_A6 GAAACGGGA)AG|AGCC|CA(GCGCTGAATTCCGCGG TCCTCA-CGGGCCGCC-GGAAAATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCTGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_pipake_08HMCAD_325_1W ------)--|----|--(------nnnnnnn nnnn---nnnnnCGCC-GGA-AATGTAGCGT)TC|GGGAGGAgga|tGTCaw----TTAT|CGcGCGGT|T------TT|CgGCGCCCTGTC|CAr(GTTCaTCTTGAAAGGGGC)CCCGCTTA|TC|(CrTAs)A(GGGTGCCa|GG|CCC)GTAGC|GACGGgCGCCG||GCCGCGACG|G|TCCTCTTCCC|CagAGTC(GGGTTGCTTGasAGTGCAGCCC)TAAGC(TGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CgAGACC|GATAGCGAACA Chimarra_bimbltona_HMTRI_103_1W ------)--|----|--(------CGGGCCGCC-GGa-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCTGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(TGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_usitatissima_RBCAD_0805 ------)--|----|--(------ctca-CGGaccGCCGGGA-AATGTGGCGT)TC|GGGAGGGAGA|tGTCAA---TTTAT|CGCGCGGT|T-----CTT|CGGCGTCCTGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGACGCCG||GCCGCGATG|G|TCTCCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_sp_2_VEN_RBCAD_2425_1W ------)--|----|--(------nnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnAgGGAGA|TGTCAA---TTTCT|CgcgcNNN|N------NN|NNNNcGNNGGTC|NnN(gTtcwTcTTGAaTGgggC)CcCgctta|tC|(CGTAG)A(GGGTGCCa|gg|sCC)GtAGT|GACGGACGTCG||GyCGcgacg|g|tCTTCCtCCC|CagAgtc(GGgtTGCTTgaGAgTGCAGCCC)TAAGT(GGgtggtaaACTCyATC)TAA|GGCT|AAATACGA|CCA-CGAgaCC|GATAGCGAACA Chimarra_morio_RBCAD_2399_1W ------)--|----|--(----nnnnnnnnnnnn nnnnnn-nnnnnnnnn-nnA-AATGtAcGCG)wN|NNNaNgtAGA|TGTCmA---TTTAT|CGcgCGgT|C------tT|cGgCGtccGGtC|caa(GTTCaTCTTGAATGGGGC)CcCGctTA|TC|(CGTAG)A(GgGwGCCA|GG|CCC)GTAGT|GACGgACGCCG||GccGCGacg|g|tCTTCCTCCC|caGAGTC(GGGtTGCTTGAgAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_paria_RBCAD_2407_1W ------)--|----|--(----nnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn---nnnnn|nnnnnnnn|------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_sp_8_BR_RBCAD_2438 ------)--|----|--(------nnnnnnn -ctCaC-GGATCGCAG-GGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_sp_9_BR_RBCAD_2439 ------)--|----|--(------a-AATGTAGCGt)TC|GGgAGGGAGA|TGTCrT----TTAT|CGCGCGGT|C------TT|CGGCGTCcGGTC|caa(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCcGCGACG|g|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCaGCCC)TaAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACgA|CCA-CGAGACC|GATAGCGAACA Chimarra_beckeri_RBCAD_2360 ------)--|----|--(------AtGTAGCGT)TC|GGGAGGGAGA|TGTCAA---CTTAT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_straminea_UMC424_1W_D2 ------)--|--nn|nn(nnnnnnnnnnnnnnnn nnnn---nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n-----nnn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_teresae_RBCAD_2418 ------)--|----|--(----nnnnnnnnnnnn nnnn---nnnnnnnnn-nnA-AaTGTAGCGT)TT|GGGAGGGAGA|NGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCcGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGaGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_sp_4_BR_RBCAD_2428 ------)--|----|--(-----nnnnnnnnnnn nnnn---nnnnnnnnn-nnA-aaTGtAGCGT)TT|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|k|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGaGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_mycterophora_RBCAD_2452 ------)--|--CC|CA(NNNCTGAATCCNGCNG TCTNTA-CGGNcGCAG-GgA-AaTGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_peruviana_RBCAD_2454 ------)--|----|--(---nnnnnnnnnnnnn nnnnnn--nnnnnnnn-nnn-NNNNtgaNgt)TT|GNGAGGAAGA|TGTCNA---TTTCT|Cgcgcggt|c------tt|CGGCGTCCGGtC|cAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGgTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGAcG|g|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGtAAACTCcATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_peruviana_D2_RBCAD_2453 ------)--|----|--(----nnnnnnnnnnnn nnnnnn-nnnnnnnnn-nnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn---nnnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-CGAgacc|gatagcgaaca Chimarra_piliferosa_RBCAD_2305 ------)--|----|--(------GCAG-GgA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_piliferosa_RBCAD_2304 ------)--|----|--(------tCTA-CGGAcGCAG-GGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_brasiliana_RBCAD_2362 ------)--|----|--(------nnnnnG-Gga-aatGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_cultellata_RBCAD_2389 ------)--|----|--(------nnn----nnnnnnnnnnnna-AATGTAgCGT)TC|GGgAGGgAgA|TGTCaa---TTTCT|CGcgCggT|c------tT|cggcgtCsGgtC|Car(GTtCatCTTGAATGgggC)CCCGCTTA|TC|(CGTAG)A(GGGtGCCa|GG|CCc)GtAgT|GacGGacGCCG||GccGCgACG|g|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGaGAgtGCaGCCC)TAAGT(GGGTGGtAmACTCCATC)TAA|GGCT|AAATACgA|CCA-CgAGACC|GATAGCGAACA Chimarra_parana_RBCAD_2406_1W ------)--|----|--(----nnnnnnnnnnnn nnn----nnnnnnnnnnnna-aaTgtagCGT)TC|GGGAGGGAGA|tGTCAA---TTTCT|CGcgCGGt|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_sp_5_BR_RBCAD_2434 ------)--|----|--(------gCaGgga-aatGTAgCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_sp_7_BR_RBCAD_2436 ------)--|----|--(-----nnnnnnnnnnn nnn----nnnnnnncaggga-AatGTagcGT)Tc|GGgAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_texana_08OFCAD_0854_OFCAD876 ------)--|----|--(------a-aatGTNNNNt)tN|GgNAGg-krA|tGTCAA---TTTCT|CGcGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_camella_RBCAD_2457_1W ------)--|----|--(------nnnnnn nnnn---nnnnnnckG--rA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA----TTAT|CGCGCGGT|C------|CGGCGCCCTGTC|CAA(GTCCATCTTGAACGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGGCG|G|TCTCCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(TGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_kontilos_RBCAD_2460_UMCHM101 GAA-CGGGA)AG|AGCC|CA(GcgCTGAntccNNnGG nCCGA--Aag-TCgCCgGgA-AATGTAGCGt)TC|GGgAgnGAGA|tGTCAA----TtaT|CGCgCgGT|C------|CGgCGcCCTGtC|Cna(GTCcaTctTGaacggggc)CccgcTtA|Tc|(cgtAg)A(GGgtGcca|gG|ccc)gtagc|gAcgggCGCCG||gccGCggck|g|TcTCCTTCCc|CaGAGTC(GGGTTGCTTGAgAgTgcagcCc)taaGt(tggtGGTaAACTCCATC)TAA|GGCT|AAATACGA|Cca-cgagAcC|GATaGCgAaCA Chimarra_rosalesi_PHIL_W1 GAAACGGGA)AG|AGCC|CA(GCGCTGAATCCCGCGG TCCGAG-AGGGCCGCCGGGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA----TTAT|CGCGCGGT|C------TT|CGGCGCCCGGTC|CAA(GTCCATCTTGAACGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCTCYTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_maldonadoi_PHIL_W3 GAAACGGGA)AG|AGCC|CA(GCGCTGAATCCCGCGG CCTCCA-CGGGCCGCCGGGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAG---TTTAT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGATG|G|TCTCCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_odonta_RBCAD_2296 ------)--|----|--(------gggccgccGGGA-cATGTAGCGT)TC|GGGAGGGAGA|TGTCAT----TTAT|CGCGCGGT|C------TT|CGGCGCCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGATG|G|TCTCCTTCTC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_rossi_PHIL_J5 GAAACGGGA)AG|AGCC|CA(GCGCTGAATCCCGCGG TCCTCA-CGGACCGCCGGGA-CCTGTAGCGT)TC|GGGAGGGAGA|TGTCAT----TTAT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGACG|G|TCTCCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_patosa_RBCAD_2447 ------)--|----|--(---nnnnnnnnnnnn- nnnnnn-nnnnnnnnnGGGA-CCTGTagCGT)TC|GGGAGGGAGA|tGTCAT----TTAT|CGCGCGGT|A------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGGCGCCG||GCCGCGACG|G|TCTCCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_puertoricensis_PHIL_CP1 GAAACGGGA)AG|AGCC|CA(GCGCTGAATCCCGCGG CCCTCA-CGGGCCGCCGGGA-GCTGTAGCGT)TC|GGGAGGGAGA|TGTCAT----TTAT|CGCGCGGT|G------TT|CGGCGCCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCTCCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATAYGA|CCA-CGAGACC|GATAGCGAACA Chimarra_redonda_UMNEA831 ------)--|----|--(------ggg-acc-tGtagCGttc)gg|aggAGGGAGA|TGTCAT----TTAT|cgtgcggt|T------tT|CGGCGCCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCTCCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGA(GGGTGGTAAACTCCATC)TAA|GGCT|AAATATGA|CCA-CGAGACC|GATAGCGAACA Chimarra_tachuela_RBCAD_2470 ------)--|----|--(--nnnnnnnnnnnnnn nnnnnn--nnnnnnnnnnnn-nnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n-----nnn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_barinita_RBCAD_0646 ------)--|----|--(gcgctgantcccgcGg gCtCcA-CGGATCGCAGGGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_albomaculata_PHIL_Q21_UMNEA653 GAAACGGGA)AC|AGCC|CA(GCGCTGAATCCCGCGG TCTCAA-CGGATCGCAGGGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGYGAACA Chimarra_barrettae_PHIL_K8 GAAACGGGA)AC|AGCC|CA(GCGCTGAATCCCGCGG TCTCAACCGGATCGCAGGGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGYT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_cipoensis_RBCAD_2372 ------)--|----|--(------nnnnn nnnn----nnnnnGCAGGGA-AATGTAGCGT)TC|GGGAGGGAGA|NGTCAA---TTTCT|CGCGCGGT|T------TT|CGACGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGTCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_immaculata_RBCAD_2307 ------)--|----|--(------gCGT)TC|GGGAgGgAGa|TGTCAA---TTTCT|CGcGCGGC|------TT|CGGCGTccGgtC|CAA(GTtCwTCTTGAATGGGGC)CCCGcTTA|TC|(Cgtrc)A(GGGTGCCA|GG|CCC)GTAgT|GACGGACGCCG||GcyGcGAcg|g|tcTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCaGcCC)TAAGT(GGGTGGTAaACTCCATC)TAA|GGCT|AAATActA|cCa-CGAGACC|GATagcGAACA Chimarra_immaculata_RBCAD_2306 ------)--|----|--(----nnnnnnnnnnnn nnn-----nnnnnnnnnnnnnnnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|nnnnnnnn|n------nn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnTCCC|CAgAgtn(GNNnTGCTTGAGAGAGCAgcCA)TAAGt(GggTGGTAAACTCCATC)TAA|GGCT|AAaTACgA|cct-CgAGACc|gatagcGAacA Chimarra_peytoni_RBCAD_2288_1W ------)--|----|--(------aGCAGGGa-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_peytoni_UM418_1W ------)--|----|--(------tcA--CGgaGmGcaGGga-aaTGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGt|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_distermina_RBCAD_2444 --A-aCGGg)AC|AGCC|CA(GcgCTGAaTCCNGcGG Tctca--cGsaGmgcAGGGA-AaTGTAGCGT)TC|GGGAGGGAGA|tGTCAA---TTTCT|CGCGCGGT|C------TT|CGGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_conica_RBCAD_2380 ------)--|----|--(------nnn nnn----nnnnnnnnnnnga-AatgtagcGt)TC|GGGAGGGAGA|tGtcaA---TTTCT|CGCgCGgt|y------TT|CGACGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGN|GACGGACGTCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_aureopunctata_RBCAD_2278 ------)--|----|--(------GagcaGggA-AATGTAGCGT)TC|GGGAGGGAGA|TGTCAA---TTTCT|CGCGCGGc|------Tc|CgGCGTCCGGTC|CAA(GTTCATCTTGAATGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarrhodella_ulmeri_PHIL_J7 GAAACGGGA)AC|AGCC|CA(GCGCTGAATCGCGCGG TCCGCG-CGGGCCGCCGCGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTTAATTCGTTAT|CGCGCGGT|CACCAGTCA|CGGCGTCCAGTC|CAA(GTCCATCTTGAAGGGGGC)CCCGCTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTGGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(TGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCATCGAGACC|GATAGCGAACA Chimarrhodella_peruviana_RBCAD_0780 ------)--|----|--(gcgctgantcGCGCGG Tc-gcG-CGGgCCGCCGCGA-AATGTAGCGT)TC|GGGAGGGAGA|TGTTAATTCGTTAT|CGCGCGGT|CACCAGTCA|CGGCGTCCAGTC|CAA(GTCCATCTTGAAGGGGGC)CCCGCTTA|TC|(CGCAG)A(GGGTGCCA|GG|CCC)GTGGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(TGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCATCGAGACC|GATAGCGAACA Chimarrhodella_peruviana_RBCAD_0785 ------)--|----|--(------nnnnnnnnnnnnnnnnnn)nn|nnnnnnnnnn|nnnnnn----nnnn|------|-nnnAGTCA|CGGCGTCCAGTC|CAA(GTCCATCTTGAAGGGGGC)CCCGCTTA|TC|(CGCAG)A(GGGTGCCA|GG|CCC)GTGGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGT(TGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCATCGAGACC|GATAGCGAACA Chimarrhodella_pilcopata_RBCAD_2478_1W ------)--|----|--(------GCCGcgA-aaTGTAGCGT)TC|GGGAGGGAGA|TGTTAATTCGTTAT|CGCGCGGT|CACCAGTCA|CGGCGTCCAGTC|CAA(GTCCATCTTGAAGGGGGC)CCCGCTTA|TC|(CGCAG)A(GGGTGCCA|GG|CCC)GTGGT|GACGGACGCCG||GCCGCGACG|G|TCTTCCTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGA(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarrhodella_nigra_RBCAD_0777_1W ------)--|-nnn|nn(nnnnnnnnnnnnnnnn nnnn-n---nnnnnnnnnnnnnnnnnnnnnn)nn|nnnnnnnnnn|nnnnnnnnnnnnnn|nnnnnnnn|nnnnnnnnn|nnnnnnnnnnnn|nnn(nnnnnnnnnnnnnnnnnn)nnnnnnnn|nn|(nnnnn)n(nnnnnnnn|nn|nnn)nnnnn|nnnnnnnnnnn||nnnnnnnnn|n|nnnnnnnnnn|nnnnnnn(nnnnnnnnnnnnnnnnnnnnnn)nnnnn(nnnnnnnnnnnnnnnnn)nnn|nnnn|nnnnnnnn|nnn-nnnnnnn|nnnnnnnnnnn Chimarra_marginata_PHIL_Q13 GAAACGGGA)AG|AGCC|CA(GCGCTGAATTCCGCGG TCCTCA-CGGGCCGCCGGAA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA Chimarra_bertrandi_PHIL_Q17 GAAACGGGA)AG|AGCC|CA(GCGCTGAATTCCGCGG TCCTCA-CGGGCCGCCGGAA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGYTTA|TC|(CGTAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGAC?|??????????? Chimarra_n_sp_E_PHIL_Q18 GAAACGGGA)AG|AGCC|CA(GCGCTGAATTCCGCGG TCCTCA-CGGGCCGCCGGAA-AATGTAGCGT)TC|GGGAGGAGGA|TGTCAA----TTAT|CGCGCGGT|T------TT|CGGCGCCCAGTC|CAA(GTTCATCTTGAAAGGGGC)CCCGCTTA|TC|(CACAG)A(GGGTGCCA|GG|CCC)GTAGC|GACGGGCGCCG||GCCGCGACG|G|TCCTCTTCCC|CAGAGTC(GGGTTGCTTGAGAGTGCAGCCC)TAAGC(GGGTGGTAAACTCCATC)TAA|GGCT|AAATACGA|CCA-CGAGACC|GATAGCGAACA

[ 23 3' 24 2' D2-1a D2-1b D2-1c D2-1d D2-1e D2-1 D2-1e' D2-1d' D2-1c' D2-1b' D2-1a'] Unaligned ----(------)----|--|------(------)------|------|------|------| ------|------||----|-|------|------|------|---|------|------|------|------|------|--|------|---|----|------|------|------|------|------Chimarra_akkaorum_08HMCAD_099 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TC ------|GGRGGTC||CACG|T|CGGGCYG|Ty ----- AG|TCGGTTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGTAATCGG|CT|CGGCTCG|T-T|CGTG|--CTTCC|GGTCTTC|GAAGTGCGTGCACT|TCTCCCT|TAGTACAA Chimarra_akkaorum_HMTRI_098 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TC ------|GGGGGTC||CACG|T|CGGGCYG|TT ----- AG|TCGGTTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGTAATCGG|CT|CGGCTCG|T-T|CGTG|--CTTCC|GGTCTTC|GAAGTGCGTGCACT|TCTCCCT|TAGTACAA Chimarra_monorum_HMTRI_095 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TC ------|GGGGGTC||CACG|T|CGGGCCG|TT ----- AG|TCGGTTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGTAATCGG|CT|CGGTTCG|T-T|CGTG|--CTTCC|GGTCTTC|GrAGTGCGTGCACT|TCTCCCT|TAGTACAA Chimarra_ambulans_RBCAD_0559 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnntcgaacgatcgraC |GGGgAGa| ttcaTTCAGCGC G------TCT-TC ------|GGgggTC||CGCG|T|CGGGcCG|tc ----- AG|TCGATCGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|T-T|CGCG|--CATCC|GGytTCC|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_ambulans_RBCAD_0558 AGTA(CCGtGAGG)GAAA|Gt|TgaAAAGAA(CTTTgAAGAgAG)AGTTcaAGAgTACGTgAAA|CCgTTcAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGC G------TCT-TC ------|GGGGGTC||CGCG|T|CGGGCCG|TC ----- AG|TCGATtGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTycg|T-T|CGCG|--CATCC|GgytTCC|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_augusta_RBCAD_0553 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnCgacgatCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGACTG|TC ----- wk|TCGATyGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|T-T|CGCG|--CATCC|GGCCCCC|GAAGTGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_augusta_RBCAD_0554 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnGTTCAGGG|GTAAACTGC-GGGaCTCGrACGATCgAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGgAcTG|TC ----- aG|TCGATyGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|T-T|CGCG|--CATCC|GGCCCCC|GAAGTGCGTGCACT|TCTCCCT|yAGTACAA Chimarra_fuscipes_RBCAD_0593 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCTTCA ---nnn|GGGGGTC||CGCG|T|CGGGCCG|CA ----- CG|TCGATCGCG|---|GCGGGCGT|---TTCG-|GCG-TCCCGT|----TCaa|CGCGGtCGG|CT|CGGTCCG|T-T|CGCG|--CATCC|GGCCTCC|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_fuscipes_RBCAD_0593 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCTTCA ------|GGGGGTC||CGCG|T|CGGGCCG|CA ----- CG|TCGATCGCG|---|GCGGGCGT|---TTCG-|GCG-TCCCGT|----TCaa|CGCGGtCGG|CT|CGGTCCG|T-T|CGCG|--CATCC|GGCCTCC|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_angustipennis_08OFCAD_0824 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGGCCG|TC ----- AG|TTGATTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGyAGTTAG|CT|CGGTyCG|T-T|CGTG|--CTTCC|GGCCTCC|GAAGyGCGTGCACT|TCTCCCt|yAGTACAA Chimarra_limon_RBCAD_0597 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGC G------TCT-TA ------|GGGGGTC||CGCG|T|CGGGCCG|TC ----- AG|TCGATCGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGgtcgg|cT|CGGTCCG|T-T|CGCG|--CATCC|GGCCTCC|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_aterrima_RBCAD_1500 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGACTG|TC ----- AG|TCGATCGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|T-T|CGCG|--CTTCC|GGCyCCC|GAAGTGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_duckworthi_RBCAD_0579 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnngcgt G------TCT-t------|AgGGGkC||cGCG|T|CGGgtCG|yc ----- aG|tCGGCTGCG|---|GCGGgcGT|---TTCG-|GCG-TTCCGT|----TCAA|CGTAGTCGG|CT|CGATTCG|T-T|CGCG|--CnTCC|GGCCTCC|GAAGTGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_centralis_UMC286_1W_Poor nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnnnnnn nnnnnnnn nnnnnn n-----|nnnnnnn||nnnn|n|nnnnnnn|nn nnnnn nn|nnnnnn---|---|nnnnnnnn|---nnnn-|nnn-nnnnnn|-nnnnnnn|nnnnnnnnn|nn|nnnnnnn|n-n|nnnn|--nnnnn|nnnnnnn|nnnnnnnnnnnn-t|wcTCCCC|TAnaaCAa Chimarra_chiangmaiensis_1W_08HMCAD_245 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnnnnnn nnnnnnnn nnnnnn nnnnnn|nnnnnnn||nnnn|n|nnnnnnn|nn nnnnn nn|nnnnnn---|---|nnnnnnnn|---nnnn-|nnn-nnnnnn|-nnnnnnn|nnnnnnnnn|nn|nnnnnnn|n-n|nncg|--CATCC|GGCCTCC|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_flinti_RBCAD_0590_D2mid_1W nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnnnnnn nn-nnnnn nnn-nn ------|nnnnnnn||nnnn|n|nnnnnnn|nn ------|nnnnnnncg|---|gCgGGCGt|---TTCg-|gCG-Ttccgt|----TCAA|CGCGgtNNg|cT|CGGTNCG|T-t|CGcG|--CATCC|ggcCtCC|GAAGNGCGTgCaCt|TcTNCCT|CAGTACAA Chimarra_suadulla_08HMCAD_247 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCACTCAGCGC G------TCTnCC nnnnnn|GGGGGTC||CGCG|G|CGGGT--|------|------|---|CGCGTCGT|---TTCG-|TG------|---CGCAA|GCGCGAGGC|GC|GCGGCCC|G-C|CGCG|--CATCC|GATTCCC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_joliveti_08HMCAD_242 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCACTCAGCGC G------TCT-TC ------|GGAGGTC||CGCG|G|CGGGCGG|CG ------|------|---|TCGG----|---TTCG-|-----TGTGA|----TAAG|CGCGAATCG|CG|CCGTCGG|T--|CGCG|--CATCC|GATCTyC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_lannaensis_HMCAD_105_D1_2_1W AGTA(CCGTGAGG)GArA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|gtAAACCTGCGGGACTCGAACGATCgAaC |GGGGAGA| TTCACTCAGCGC G------TCT-CC ------|GGGAGTC||CGCG|T|CGgGCCG|Cg ------|------|---|tCG-----|---TTCG-|-----TGTGA|----TGAG|CGCGAAAyG|CA|CGGTCCG|C--|CGCG|--CcTCc|cgttccC|GgAgCGCgTgCACT|TCTCCCT|CAGTACAA Chimarra_oreithyia_08HMCAD_227 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCACTCAGCGC G------TCT-CC ------|GGGAGTC||CGCG|G|CGGGCCG|CG ------|------|---|TCG-----|---TTCG-|-----TGTGA|----YAAG|CGCGAAACG|CA|CGGTCAG|T--|CGCG|--CTTCC|GATTCAC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_tsudai_PHIL_CT1 AGTA(CCGTGAGG)GAAA|GT|TGAAAARaA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| -TCACTCAGCGC G------TCT-TT ------|CGGAGTC||CGCG|G|CGGGCCG|CG ------|------|---|TCG-----|---TTCG-|-----TGTGA|----TGAG|CGCGAAACG|CA|CGGTCCG|T--|CGCG|--CATCC|GATTCCG|AGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_megara_08HMCAD_226 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCACTCAGCGC G------TCT-CC ------|GGGGGTC||CGCG|G|CGGGCCG|CT ------|GCGTCGGTG|TGA|------|------|------|----TGAG|CGCCGAACG|CG|CGGTCCG|T--|CGCG|--CATCC|GATTCCC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_spinifera_08HMCAD_241_1W nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnnnnnn nnnnnnnn nnnnnn nnnnnn|nnnnnnn||nnnn|n|nnnnnnn|nn ----n nn|nnnnnnnnn|nn-|nnnnnn-n|---nnnn-|nnn-nnn---|------|nnnnnnnnn|nn|nnnnnnn|n-n|nnnn|--nnnnn|nnnnnnn|nnnnnnnnnnnnnn|nnnnnnn|nnntacAA Chimarra_poolei_RBCAD_0619_D2mid_1W nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnnnnnn nn-nnnnn nnn-nn ------|nnnnnnn||nnnn|n|nnnnnnn|nn nnnnn nn|nnnnnn---|---|nnnnnnnn|---n----|------|------A|CGCGGTtAG|Ct|CGAtTCG|T-T|CGcG|--CATCC|GgCCacc|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_uranka_RBCAD_0632 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGC GT------CTC-GA ------|GGGGGTC||CGCG|T|CGGGCCG|TC ----T CG|TCGATCGCG|---|GCGGGCGT|---TTCG-|GCG-T-TC--|-CGTTCAA|CGCGGTCGG|CT|CGGTGCG|T-T|CGCG|--CATCC|GGCCCCC|TCAGCGCGTGCaCT|TCTCCCT|CAGTACAA Chimarra_protuberans_RBCAD_2310 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ----nn|GGGGGTC||CGCG|T|CGGACTG|AA ----- AG|TTGGTTGC-|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCAG|CT|CGGTYCG|T-T|CGCG|--CTTCC|GGCCCCC|GAAGTGCGTGCACT|TCTCCCT|NAgTACAA Chimarra_rhamphodes_RBCAD_2308 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGAtCG|tc ----- AG|TTGgctGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTTAG|CT|CGGTTCG|T-T|CGCG|--CTTCC|GGCTCCC|GAAGTGCGTGCACT|TCTCCCT|yAgtACAA Chimarra_adamsae_RBCAD_2484 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnCCTGCGGGACTCgaacgaTCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGggcCG|TC ----- AG|TCGGCTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|T-T|CGCG|--CATCC|GGCCCCC|GAAGTGCGTGCACT|TCTCCCT|NAGTACAA Chimarra_sp_1_BOL_RBCAD_2520 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGRYCG|TC ----- AG|TYGGCTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGgTyrG|CT|CGrTyCG|T-T|CGCG|--CATCC|GGCCCyC|GAAGTGCGTGCACT|TCTCCCT|TAGTACAA Chimarra_platyrhina_RBCAD_0615 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CcGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGgTC||CGCG|T|CGGGTCG|TC ----- AG|TCGGCTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGTAGTNGG|CT|CGATTCG|T-T|CGCG|--CNTCC|GGCCTCC|GAAGTGCGTGCACT|TCTCCCT|TAGTACAA Chimarra_villalobosi_RBCAD_0636_1W AGTA(CcgtgaGG)gAAA|GT|TGAAAAGAA(CTTTGAAGAgAG)AGTTCaAGAGTACGTgaaa|ccgTTcaGGg|gtaaAcctgcgGGAcTcgaacgatCgAAC |GgGgaga| ttcaTTCagCgt G------tct-ta ------|Nggggtc||CGcG|t|CGggtcg|tC ------|nnnnnnnnn|GC-|GGCggcGt|---TtCn-|nnn-n-nnnn|--nnnnnn|nnnnnnnnn|nn|nnnnnnn|n-n|nnnn|--nnnnn|nnnnnnn|nnnnnnnnnnnnnn|nnnnnnn|nnnnnnnn Chimarra_obscura_PHIL_R5 ????(????????)????|??|?????????(????????????)???????????????????|??????????|????????????????????????????? |???????| ???????????? ???????? ?????? ??????|???????||????|?|???????|?? ????? ??|?????????|???|????????|??????-?|---?------|--??????|?????????|??|???????|?-?|????|--?????|???????|??????????????|???????|???????? Chimarra_socia_RBCAD_1497 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGATyG|TA ----- AG|TTGAyyGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|T-T|CGCG|--CTTCC|GGCCCCT|AAAGTGCGTGCACT|TCTCCCT|yAGTACAA Chimarra_socia_08NBEPT_0005 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGATTG|TA ----- AG|TTGANTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|T-T|CGCG|--CTTCC|GGCCCCT|AAAGTGCGTGCACT|TCTCCCT|TAGTACAA Chimarra_neboissi_RBCAD_1701 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGC G------TCT-TC G-----|GGGGGTC||CGCG|T|CGGNcCG|CG ----- NG|TCGGCCGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCGG|CT|CGGTCCG|G-T|CGCG|--CATCC|GGCCNCC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_sp_1_BR_RBCAD_2513 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-TA ------|GGGGGTC||CGCG|T|CGGGTCG|TC ----- AG|TCGGCTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGYRGYMGG|CT|CGATCCG|T-T|CGCG|--CATCC|GGCCTCC|GAAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_feria_PHIL_A6 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT G------TCT-YA ------|GGGGGTC||CGCG|T|CGGGCTG|TC ----- AR|TCGGCTGCG|---|GCGGGCGT|---TTCG-|GCG-TTCCGT|----TCAA|CGCGGTCRG|CT|CGGTCCG|T-T|CGTG|--CTTCC|GGCCCCC|GAAGTGCGTGCACT|TCTCCCT|YAGTACAA Chimarra_pipake_08HMCAD_325_1W AGTa(csGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAgaG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGGACTCGAACGATCGAAC |GGGGAGA| ----TTCAGCGC A------TTT-TC ------|GGGGGTT||CGCG|T|CGGGnnn|nn nnnnn nn|nnnnnn---|---|nnnnnnnn|nnnnnnnn|nnnnnnnnn-|-nnnnnnn|nnnnnnnnn|nn|nnnnnnn|n-n|nnnn|--nnnnn|nnnnnnn|nnnnnnnnnnnnnn|nnnnnnn|nnnnnnnn Chimarra_bimbltona_HMTRI_103_1W AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGGACTCGAACGATCGAAC |GGGGAGA| ----TTCAGCGC A------TTT-TC ------|GGGGGTT||CGCG|T|CGGGTCG|AC ------|-GTCGGTTC|--T|----GCGT|---TTCG-|GCG-CG----|------|-GGG-T---|--|CGGCTCG|G-C|TCGT|--CGTCC|GGCCTCC|GAAGGGCGTGCACT|TCTTCCT|TAGTACAA Chimarra_usitatissima_RBCAD_0805 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGATCG|TG --TGT TC|TCGATCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|AG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTAAAA Chimarra_sp_2_VEN_RBCAD_2425_1W AgTa(CcGtGAGG)gAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AgtTCaAGAgTACGTgAAA|CCGTTCAGGG|GtaAACCTGTGgaactCgAAcgAtcgAAC |gGgGAtA| ----Ttcagcgt yg------tTT-Tc ------|GGGGGtC||CmCG|g|cGGANcG|Na ----- Cw|TcGgTCGCG|---|GcGG-CGt|---TTCG-|NCG-T-CNTT|-nn-----|------|--|------|---|----|------|------|------|------|------Chimarra_morio_RBCAD_2399_1W AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGrGCCG|------|------|---|------|------|------|------|------|--|------|---|----|------|------|------|------|------Chimarra_paria_RBCAD_2407_1W nnnn(nnnnnnnn)nAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGArCCG|TA C---- AT|CCGGTCGCG|GC-|GGCggCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGgTTCG|T-T|CGTG|--TATCC|GGCCTCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_sp_8_BR_RBCAD_2438 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_sp_9_BR_RBCAD_2439 AGTA(CCGTGAGG)gAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGgGGTC||CACG|G|CGGGCCG|TT G---G AT|CCGGTCGCG|GCG|AGCGgCGT|---TTCG-|GCG-T-CGTT|TCgtTCaa|cGCgATCGG|GG|CggTCcG|T-C|CGTG|--TgTCC|GGCCCCc|GGAGCGCGTGCaCT|TCTCCCC|TAGTACAA Chimarra_beckeri_RBCAD_2360 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGATC||CACG|G|CGGACCG|TT G---G AT|CCGGTCGCG|GCG|GACGGCGT|---TTCG-|GCG-T-CGTT|TCGTTCAA|CGCGATCGG|GG|CGGTGCG|T-C|CGTG|--TATCC|GGTCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_straminea_UMC424_1W_D2 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnnnnnn nnnnnnnn nnn-nn nnnnnn|nnnnnnn||nnnn|n|nnnnnnn|nn n---- nn|nnnnnnnnn|nn-|nnCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCaA|CGCGATCGG|rG|CGGNCCG|T-T|CGtG|--TATCC|GGCCTCC|GGAgcGCGTGCACT|TCTCCCC|TAgtACAA Chimarra_teresae_RBCAD_2418 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCaA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGaGCGCGTGCACT|TCTCCCC|TAGTACaA Chimarra_sp_4_BR_RBCAD_2428 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-cGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATcC|GGcCCCc|gGAGCGCGTGCACT|TCTCCCC|tAGTACAA Chimarra_mycterophora_RBCAD_2452 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_peruviana_RBCAD_2454 AGTA(CCGTGAGG)GAAA|GT|TGAAaAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGtTCAGGG|GTAAACCTGTGGAActCGAAcGAtcgaAC |GGGgATA| ----tTCAGCGT CG------tTt-Tc ------|GGggGTC||cAcg|g|cGGgCCG|tc a---- at|ccggtCGCG|Gc-|GGCGGCgt|---ttcg-|gcg-T-CgtC|-cgTTCAA|CGCGATCGG|cg|cggtccg|T-T|CGTG|--TATCC|GgCCCCc|gGagcgcGTgcacT|TcTCCCC|tAgTAcaa Chimarra_peruviana_D2_RBCAD_2453 agta(ccgNgagg)GaaA|gt|tgaaaagaa(ctttgaagagag)agttcaagagtacgtgaaa|ccgttcaggg|gtaaacctGtggaactcgaacgatCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTc||Cacg|G|CGGGCCG|TC A---- AT|cCGgtCGcG|Gc-|GGcGgcGT|---TTCG-|GCG-T-cgTC|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_piliferosa_RBCAD_2305 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGATCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGGTCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_piliferosa_RBCAD_2304 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGATCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGGTCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_brasiliana_RBCAD_2362 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGrTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTC|-CGTTCaA|cGCGATCGG|sG|CGGkCCG|k-T|CGTG|--tATCC|gGsCCCC|GGAGCsCGtGCACT|TCTCCCC|TAGTAmAA Chimarra_cultellata_RBCAD_2389 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGgTcGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGGTCGG|CG|CGGTCCG|T-T|CGTG|--TATyC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_parana_RBCAD_2406_1W AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAa|CGCGgTCGG|CG|CGGTCCG|T-T|CgtG|--tATCC|GGCCCCC|GGAGCGCGtGcaCT|TCTCCCC|TAGtACaA Chimarra_sp_5_BR_RBCAD_2434 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGGTCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_sp_7_BR_RBCAD_2436 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGGTCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_texana_08OFCAD_0854_OFCAD876 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTt|-CGtTCaa|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATcC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_camella_RBCAD_2457_1W AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGAGA| ----TTCAGCG- CG------TTT-TC ------|GGGGGTC||CGCG|G|CGGGTCG|CC ------|TCGGTCGTG|C--|GGCGGCGT|---TTCG-|GCG-T-CGTT|-----TAG|CGCGGTCGG|A-|CGGCTCG|C-T|CGCG|--AATCC|GGCCTCC|GGAGCGCGTGCACT|TCTTCCC|TAGTACAA Chimarra_kontilos_RBCAD_2460_UMCHM101 AGTA(CCGTGAGG)GAAA|gT|tgaaaagAA(cTTTGAAGAGAG)AGTTCAaGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGAGA| ----TTCAGCG- CG------TTT-TC ------|GGGGGTC||CGCG|G|CGGGTCG|CC ------|TCGGTCGTG|C--|GGCGGCGT|---TTCG-|GCG-T-CGTT|-----TAG|CGCGGTCGG|A-|CGGCCCG|T-T|CGCG|--AATCC|GGCTCCC|GGAGCGCGTGCACT|TCTTCCC|TAGTACAA Chimarra_rosalesi_PHIL_W1 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGGA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGAAACTCGAACGATCGAAC |GGGGAGA| ----TTCAGCGT CG------CTT-TC ------|GGGGGCC||CGCG|G|CGGTCCG|T------|CTGGGTCGC|GC-|GGCGGCGT|?--TTCG-|GCG-T-CGTT|-----CGC|GCGGTTCGG|-g|CGGTCCG|T-T|TGCG|--TATCC|GGCCTTC|GGAGCGCGTGCACT|TCTTCCC|CAGTACAA Chimarra_maldonadoi AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|A|CGGATCG|TT G------|-GAAACGCG|GT-|GGCGGCGC|---TTCGC|GGTAC-CGTC|------GA|CGCGTTTTG|TG|CGATCCG|TTC|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|CAGTACAA Chimarra_odonta_RBCAD_2296 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGATCG|TG A---- GC|CCGATCGCG|GC-|GACGGCGT|?--TTCG-|GCG-T-CGTC|--GTTTAA|CGCGATCGG|TG|CGGTCCG|T-C|CGTG|--CGTCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_rossi_PHIL_J5 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGATA| -----TCAGCGT TTG----- CTT-TC ------|GGGGGTC||CACG|G|CGGATCG|TG T---- GC|CCGATCGCG|GC-|GGAGGCGT|---TTCG-|GCG-T-CTGC|--GTTCAA|CGCGATCGG|TG|CGATCCG|T-C|CGTG|--CGTCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_patosa_RBCAD_2447 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGATCG|TG T---- GC|CCGGTCGCG|GC-|GGGGGCGT|---TTCG-|GCG-T-CCTC|--GTTTAA|CGCGATCGG|CG|CGGTCCG|T-C|CGTG|--CTTCC|GGCCTCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_puertoricensis_PHIL_CP1 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGTCG|TG S---- GC|CCGATCGCG|GC-|GGCGGCNT|---YTCG-|GCG-T-CGTC|--GTTGAA|CGCGGTCGG|TG|CGGCCCG|T-C|CGTG|--CGTCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|CAGTANAA Chimarra_redonda_UMNEA831 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGnGTCG|TG T---- GC|CCGATCGCG|GC-|GACGGCGT|---TTCG-|GCG-T-CGTC|--GTTCAA|CGCGGTCGG|TG|CGGCTCG|T-C|CGTG|--CGTCC|GACCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_tachuela_RBCAD_2470 nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |nnnnnnn| nnnnnnnnnnnn nnnnnnnn nnn-nn ------|nnnnnnn||nnnn|n|nnnnnnn|nn n---- nn|nnnnnnnnn|nn-|------|------|-----nnnnn|-nnnnnnn|nnnnnnnnn|nn|nnnnnnn|n-n|nnnn|--nnnnn|nnnNNNN|NnAgcgcgtgcact|tctcccc|tagnaCaA Chimarra_barinita_RBCAD_0646 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|A|CGTACCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGGTCGG|CG|CGGTACG|T-T|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCct|TAGTACAA Chimarra_albomaculata_UMNEA653_1W_Poor nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|nnnnnnnnnnnnnnnnnnnnnnnnnnnnn |gGGGann| ----TTCAGCGy G------tTT-TC ------|ggGGGTC||CAAG|G|CGGACCG|TC ----- mm|TyGGTCGCG|---|GCGnnnnn|---nnnn-|nnn-nnnnnn|--rwTCNr|CGCGATCGG|CG|CGGTCCG|T-T|TTTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_barrettae_PHIL_K8 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGATC||CACG|G|CGGACCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|?--TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CT|CGGTyCG|T-T|CGTG|--TATCC|GGTCCCC|GGAGCGCGTGCACT|TCTCCCT|TAGTACAA Chimarra_cipoensis_RBCAD_2372 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TY A---C AT|CCGGTCGCG|GC-|GGCGGCGT|CGTTTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|CGTATCC|GGCCCCC|GGAACGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_immaculata_RBCAD_2307 AgTA(cCGTGAGG)GAAA|GT|TGAaAAGAA(CTTTGAAGAGAg)AgTTCaAGAGTACGTGAaA|cCGTTCAGGG|gTaAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGAGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGccTtC|GGAACGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_immaculata_RBCAD_2306 AgtA(CcGTGAgG)gAAa|gT|tGAAaAgAA(CTTTGAaGAgAG)AgtTCAagAgtacgtGAAA|CcGTTCAgGg|GtaaacctGtGgAACTCGAACGAtCGAac |GggGATa| ----TTCagcGT CG------TTT-TC ------|GGAgGTc||CACG|G|CgGGcCG|TC A---- AT|CCGGTCGCG|gC-|GgCGGCGT|---TTCG-|gCG-T-CGtT|-CGTTCAA|CGCGATCgG|CG|CGGtCCG|T-T|CGTG|--TATCC|GGCCTTC|GGAACGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_peytoni_RBCAD_2288_1W AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGAGGTC||CACG|G|CGGrCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCTNC|GGAACGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_peytoni_UM418_1W AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGAGGTC||CACG|G|CGGACCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TATCC|GGCCTTC|GGAACGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_distermina_RBCAD_2444 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TA A---- AT|CCGGTCGCG|GCG|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-T|CGTG|--TTTCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarra_conica_RBCAD_2380 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGtGgaaCTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CACG|G|CGGGCCG|TC A---- AT|CCGGtCGCG|GC-|GGcGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCaA|CGCGATCGG|cG|CGgtCCG|T-T|CGTG|--tAtcc|gGcCCCC|GGAGCGCGTGCACT|TCtCcCC|TAGTACAA Chimarra_aureopunctata_RBCAD_2278 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGGAACTCGAACGATCGAAC |GGGGATA| ----TTCAGCGT CG------TTT-TC ------|GGGGGTC||CGCG|G|CGGGCCG|TC A---- AT|CCGGTCGCG|GC-|GGCGGCGT|---TTCG-|GCG-T-CGTT|-CGTTCAA|CGCGATCGG|CG|CGGTCCG|T-C|CGTG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCC|TAGTACAA Chimarrhodella_ulmeri_PHIL_J7 AGTA(CCGCGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGAGA| -TCATTCAG------CTT-CC ------|---GGTC||CGCG|C|GCGGCCC|CN NNNNN NN|NNNNNNNNN|NNN|------N|-NNNNNN-|NNNNNNNnNN|NNNNNNNN|NNNNNNNNN|NN|NNNNNNN|---|----|------|NNNNNNC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarrhodella_peruviana_RBCAD_0780 AGTA(CCGCGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT CGCTTTCC GAT-TT ------|AGGGGTC||CGCG|G|CGGGTCG|TC GTTCC AG|TCTGCCGCG|GCG|AGGGGCGT|---TTCG-|GCG-T-CTCT|-CGTTCAA|CGCGGCAGG|CG|CGGCCCG|T-T|CGCG|--TCTCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarrhodella_peruviana_RBCAD_0785 AGTA(CCGCGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT CGCTTTCC GAT-TT ------|AGGGGTC||CGCG|G|CGGGtCG|TC GTTCC AG|TCTGCCGCG|GCG|AGGGGCGT|---TTCG-|GCG-t-CTCT|-CGTTCAA|CGCGgcAGG|CG|CGGCCCG|T-T|CGCG|--TCTCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarrhodella_pilcopata_RBCAD_2478_1W AGTA(CCGCGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGTGAAACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT CGCTTTCC GAT-TT ------|nnnnnnn||nnnn|n|nnnnnnn|nn ----- nn|nnnnnnnnn|nnn|nnnnnnnn|---nnCn-|------cgTT|----TcAA|CGCGGCAGG|cg|CGGcCCg|T-T|cGCG|--TctcC|gGCCCCC|gGAGcGcGtGCaCt|TcTcC-t|CaGtACAA Chimarrhodella_nigra_RBCAD_0777_1W nnnn(nnnnnnnn)nnnn|nn|nnnnnnnnn(nnnnnnnnnnnn)nnnnnnnnnnnnnnnnnnn|nnnnnnnnnn|ntAAACCTGTGAAACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGT CGCTTTCC GAA-TA ATTCAT|AGGGGTC||CGCG|G|CGGGTCG|TC GTTCC AG|TCTGCCGCG|NNG|GGCGGCGT|---TTCG-|GCG-T-CGCA|-CGTTCTA|CGCGGCAGG|CG|CGGCCCG|T-T|CGCG|--TATCC|GGCCCCC|GGAGCGCGTGCACT|TCTCCCT|CAGTACAA Chimarra_marginata_PHIL_Q13 AGTA(CCGTGAGG)GAAA|GT|TGAAAAGAA(CTTTGAAGAGAG)AGTTCAAGAGTACGTGAAA|CCGTTCAGGG|GTAAACCTGCGGGACTCGAACGATCGAAC |GGGGAGA| TTCATTCAGCGC G------TCT-TC ------|GGGGGTC||CGCG|T|CGGGCCG|GT ----- CG|TCGGTCGCG|---|GCGGGCGN|---TTCG-|GCG-TCCCGT|----TCAA|CGCGATCGG|CT|CGGTCCG|Y-T|CGNG|--CATCC|GGNCNTC|NNAGCGCGTGCACT|TCTCCCC|CAGTacAa Chimarra_bertrandi_PHIL_Q17 ????(????????)????|??|?????????(????????????)???????????????????|??????????|????????????????????????????? |???????| ???????????? ???????? ?????? ??????|???????||????|?|???????|?? ????? ??|?????????|???|????????|-?????--|------|--??????|?????????|??|???????|?-?|????|--?????|???????|??????????????|???????|???????? Chimarra_n_sp_E_PHIL_Q18 ????(????????)????|??|?????????(????????????)???????????????????|??????????|????????????????????????????? |???????| ???????????? ???????? ?????? ??????|???????||????|?|???????|?? ????? ??|?????????|???|????????|??????-?|------|--??????|?????????|??|???????|?-?|????|--?????|???????|??????????????|???????|????????

[ D2-3 D2-3a d2-3b D2-3b' D2-3a' D2-5a D2-6 D2-7a D2-7a' D2-5a' D2-3' ] Unaligned |-----|----|------|---- 11111111111 -----|------|------(------)------|------|-----|------|------|------|-(---- 666666666 ------)------|-----|------(------) --77777777777777777777------|----|------|------|------|------|- Chimarra_akkaorum_08HMCAD_099 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCy-GG(CAG AGAGTCCCGG TTC- TCGGC TTCG------GTCGG GTT CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GTGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCT|GCGGTG|- Chimarra_akkaorum_HMTRI_098 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG TTC- TCGGC TTCG------GTCGG GTT CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GTGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCT|GCGGTG|- Chimarra_monorum_HMTRI_095 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCt-GG(CAG AGAGTCCCGG TTC- TCGGC TTCG------GTCGG GTT CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGG|A-TCG|GG-GTGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AT------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCT|GCGGTG|- Chimarra_ambulans_RBCAD_0559 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG AGT- CTAGT TTCG------GCTCG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|AG-GTCCGGCGTCCT (GCGTTCCGGGCTC---CGGCGC TTC- -- G GCGTCGCAGTCCC-GGGCGT) GC------AGTCCTATGGGCGA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_ambulans_RBCAD_0558 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG AGT- CTAGT TTCG------GCTCG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|AG-GTCCGGCGTCCT (GCGTTCCGGGCTC---CGGCGC TTC- -- G GCGTCGCAGTCCC-GGGCGT) GC------AGTCCTATGGGCGA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_augusta_RBCAD_0553 |CACCG|CGAC|CCGTTG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG wGC- TCGGC TTCG------GtCgG gCT CcgGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|AG-GTACGGCGTCCT (GCGTTCCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) GT------GGCCCCCCGGGCAA AGGGGCGTCGT--GGCTT|CGAT|---CTcCGA -AC--- A|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_augusta_RBCAD_0554 |CACCG|CGAC|CCGTTG|-GcG ------tTGCG|GCGGTc|---T-ACCGCGTCC-gG(CAG AGAGTCCCGG AGC- TCGGC TTCG------GTCkG GCT cCgGAATCTG)CT-CGGCGTCGC|GACcgC|C-GCC|CGACGG|TAGAGAACGAgGATC|GGGtTC|G(GcgC ------ATCGCGC)GTC-CGA|A-TCG|AG-GTACGGCGTcCT (GCGTTCCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) GT------GGccCCCCGGGCAA AGGGGCGTCGT--GGCTT|CGAT|---CTCCGA -AC--- A|GGA---CCC|------GTCCCGGTCG|GCGGTg|- Chimarra_fuscipes_RBCAD_0593 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG TGC- TCGGC TTCG------GCCAG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAgAGAACGAGGATC|GGGTCC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|at-GTGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) GCA------GTCCAAACGGGCTA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_fuscipes_RBCAD_0593 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG TGC- TCGGC TTCG------GCCAG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAgAGAACGAGGATC|GGGTCC|G(gcGC ------ATCGCGC)gTC-CGA|A-TCG|AG-GTGCGGCGTCcT (GCGTTTCGGGcTC---CGGCGT TTc- -- G gCGTcGCAGTCCC-GGGcgt) gCA------GTCCAAACGGGcTA AGGGGCGTCGT--CGCTT|cGAT|---cTCCGA -aC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_angustipennis_08OFCAD_0824 |CACCG|CGAC|CCGTTG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCT-GG(CAG AGAGTCCCGG CGC- TCGAC TTCG------GTCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GCGCGGCGTCCT (GCGTTTCGGGCTC---CGTCGC TTC- -- G GCGTCGCAGTCCC-GGGCGT) AT------AGTCCTCTGGGCAA AGGGGCGTCGT--CGTCT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_limon_RBCAD_0597 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGGC TTCG------GTCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GCGCGGCGTCCT (GCGTTTCGGGCTC---CGTCGC TTC- -- G GCGTCGCAGTTCC-GGGCGT) AC------AGTCCACTGGGCAA AGGGGCGTCGT--CGTTT|CGAT|---CTCCGT -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_aterrima_RBCAD_1500 |CACCG|CGAC|CCGTTG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG wGc- TCGGC TTCG------GTCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|AG-GTACGGCGTCCT (GCGTTCCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) GT------GGCCCCCCGGGCAA AGGGGCGTCGT--GGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_duckworthi_RBCAD_0579 |CACCG|CGAC|CCGTTG|-GC------GCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGGC TTCG------GTCGG GCT CCGGAATCTG)CT-CGGCGTCGc|GGCCGC|C-GTC|CGACGg|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCgcgc)gtC-cGA|A-TCG|Gg-GAGCGGCGTCCT (GcGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AgTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCT|Gcggtg|- Chimarra_centralis_UMC286_1W_Poor |cAccg|cgAC|CCgtCg|-GGg tT--atTccA- ---aG|gcGNTc|-----ACcGcgtCC-Gg(gaG AaagtcccGA AGt- NCggc ctCa------aC GGnCG Gca tcggagtcTC)CTCaGGCGtcgt|ggccGC|c-Gct|cgacgG|gAgAagACGAGgATC|GgATTC|G(gCGT ------ataacgc)gtc-ccg|a-Ncg|Cg-acGCGGTACCTC (GCGCGAGGTgGgc---TTCCsG tTAG -- G CCGTT--cccGcT-TTaCGT) ------AGGGGTGCCGT-yCGTTT|csGT|-CstCTcGG -AC-TT t|GGA---TyC|------gTcycggTCG|GCGGTg|- Chimarra_chiangmaiensis_1W_08HMCAD_245 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG AGT- GACGC TTCG------GCTTC GCT CCGGAATCTG)CT-CGGCGTCGC|GgcCGC|C-GCC|CGACGG|TAGAgAACGAGGATC|GgATCC|G(GCGC ------ACAGCGC)gtC-cGG|A-TCG|GG-gTGCGGCGTCCT (GCGTTTCGGGCTC---CGGcGT TtC- -- G gCGTCGCAgTCCC-GGGCGT) AC------AGTCcTCyGGGCAA AGGGGCGTCGT--CGCTT|CgAC|---CTCCGA -AC--- C|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_flinti_RBCAD_0590_D2mid_1W |CAcCG|cGAc|CCGTCg|------GTGCg|GcGGtN|---t-aCcGCgTcC-GG(CAG AGAgtccCgG CGC- Tcggc tTCG------GNcgG GCT CCGGAATctg)cT-cggCGTCGC|GGCCgC|C-gTC|CgaCGG|TAGAGAacGAGGATC|GGGTtn|g(gcgc ------aTcGCGC)gTC-CGA|A-TCG|GG-GAGCGGCgtCcT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCgtNGCaGTyCC-GGGCGT) AC------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -aC--- C|GGa---ccC|------gTcCCGGTCG|GCGGtg|- Chimarra_suadulla_08HMCAD_247 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CGG AGAGTCCCGG TGC- TCGGC CTCA------CG GCCGG GCT CCGGAATCCG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|G(GCGC ------ACAGCGC)GTC-CCG|G-TCG|GG-ATGCGGCGTCCC (GCGTCTCGGGCTC---CGGCGC TTC- -- G GCGTCGCAGTCTC-GGGCGT) GC------G----- AAGGGCGTCGT--CGTCT|CGGC|---CGCCGG -AC--- C|GGA---TCC|------GGCCCGGTCT|GCGGTG|- Chimarra_joliveti_08HMCAD_242 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CGG AGAGTCCCGG GGT- CCGGC TTCA------CG GCCGG GCC CCGGAATCCG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|G(GCGC ------ACAGCGC)GTC-CCG|A-TCG|GG-GCGCGGCGTCCC (GCGTTTCGGGCTC---CGGCGy TTC- -- G GCGTCGCAGTCTC-GrGCGT) GC------G----- ATGGGCGTCGT--CGTCT|CGGT|---CGCCGG -AC--- C|GGA---TCC|------GGCCCGGTCG|GCGGTG|- Chimarra_lannaensis_HMCAD_105_D1_2_1W |CAcCG|CGAC|CcGTCG|-GCG ------TTGCG|gcGgTC|---T-ACCGcGtCC-Gg(CGg AGAGtCcCGG TGC- TCGgC TTCg------CG Gcccg tNa CcGgAATCcg)ctTcGGCgTCGc|gACCGC|C-GCC|CGACGg|TagAGaACGAGgAtC|gNANCG|C(gCgC ------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_oreithyia_08HMCAD_227 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG TGT- GAGGC TTCG------CG GCCTC GCT CCGGAATCTG)CT-CGGCGTCGC|-ACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|G(GCGC ------ACAGCGC)GTC-CCG|G-TCG|GG-ATGCGGCGTCCC (GCGTTTCGGGCTC---CGGCGC TTC- -- G GCGTCGCAGTCTC-GGGCGT) GC------G----- ATGGGCGTCGT--CGTCT|CGGC|---CGCCGG -AC--- C|GGA---TCC|------GGCCCGGTCG|GCGGTG|- Chimarra_tsudai_PHIL_CT1 |-----|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_megara_08HMCAD_226 |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG TGC- TCGGC TTCG------CG GCCCG GCT CCGGAATyTG)CT-yGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|C(GCGC TCG---TTT TGATGGC)GtC-CGC|A-TCG|Gg-ATGCGGCGTCCc (GcGTTTCGGGcTC---CGGCGc TTC- -- G GCGTCgCAgTCTC-GGGCGT) ------GCG ATGGGCGTCGT--CGTCT|CGGT|---CGCCGG -AC--- C|GGA---TCC|------GGCCCGGTCG|GCGGTG|- Chimarra_spinifera_08HMCAD_241_1W |CACCG|CGAC|CCGTCG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CGG AGAGTCCCGG TGC- TCGGC TTCG------CG GCCGG GCT CCGGAATCCG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGAAC|GGATCC|C(GCGC ------AC-nnnn)nnnnnnn|n-nnn|nn-nnnnnnnnnnnn (nnnnnn------GCGT TTC- -- G GGCTCCGGCGCTT-cGGCGT) CGCA------GTCTCGGGCGTGCG ACGGGCGTCGT--CGTCT|CGGC|---CGCCGG -AC--- C|GGA---TCC|------GGCCCGGTCG|GCGGTG|- Chimarra_poolei_RBCAD_0619_D2mid_1W |CACCG|CGaC|CCGTCG|------GTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGGC TTCG------GTCGG GCT CCGGAATCTG)CT-cGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GAGCGGCGTCct (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCCGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCT|GCGGTG|- Chimarra_uranka_RBCAD_0632 |CACCG|CGAC|CCGTCG|-GCC ------CCGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG AGT- TCGGC TTCG------CG GCCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTT-CGA|A-TCG|AG-GTGCGGCGTCCT (GCGTTCCGGGCTC---CGACGT TTC- -- G GCGTCGCGGTCCC-GGGCGT) GCGG------TCCCAGACGGGACTA AAGGGCGTCGT--CGCTC|CGGT|---TCGCGT -AC--- A|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_protuberans_RBCAD_2310 |CACCG|CGAC|CCGTCG|------GTGtg|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGaC TTCG------GTCGG GCt CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-gyC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GAGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCTG------|----|------|------|------|------|- Chimarra_rhamphodes_RBCAD_2308 |CACCG|CGAC|CCGTCG|------GTGTG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGtCCCGG CGC- TCGAC TTCG------GTCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GcC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GAGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGcGT) Ay------AgTCCTCTGGGCAA AGGGGCGTCGT--CgCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_adamsae_RBCAD_2484 |CACCG|CGAC|CCGTCG|------GTGTG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGaC TTCg------gtCGG GCT CCGGAATCTG)CT-CGGCGtCgC|GGCCGc|CCGyC|CGACGG|TAGAGAACGAGGATC|GGGTTc|G(gcGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GAGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCgw -AC--- C|GGA---CCC|------GTCCCGGTCA|GCGGTG|- Chimarra_sp_1_BOL_RBCAD_2520 |CACCG|CGAC|CCGTCG|------GTGyG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGAC TTCG------GtCGG GCT CCGGAATCTG)CT-CGgcGTCGC|GGCCGC|C-GCC|CGACGG|tAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GAGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCt|GCGGTG|- Chimarra_platyrhina_RBCAD_0615 |CACCG|CGAC|CCGTCG|------GTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGGC TTCG------GTCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GTC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GAGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCT|GCGGTG|- Chimarra_villalobosi_RBCAD_0636_1W |nnnnn|nnnn|nnnnnn|nnnn nnnnnnnnnnn nnnnn|------|------(nnn nnnnnnnnnn nnn- nnnnn nnnn------nnn nnnnn nnn nnnnnnnnnn)nnnnnnnnnnnn|nnnnnn|n-nnn|nnnnnn|nnnnnnnnnnnnnnn|nnnnnn|n(nnnn nnnnnnnnn nnnnnnn)nnnnnnn|-n---|--n-nnnnnnnnnnn (nnnnnnnnnnnnn---nnnnnn nnnn -- t cGGcGtNGCAgTa-ccggGc) GTA------CAGTcCTCTGGGCAA aggGGygTcgT--CGCTT|cGAT|---cTCcGA -aC--- C|GGA---ccc|------gtNcCGGtnt|GCGGTG|- Chimarra_obscura_PHIL_R5 |-----|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_socia_RBCAD_1497 |CACCG|CGAC|CCGTTG|-GCG ------CAGCG|GCGGTC|---T-ACCGCGTCy-GG(CAG AGAGTCCCGG CGC- TCGGC TTCG------GTCGG GCR CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTCC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|AG-GTGCGGCGTCCT (GCGTTCCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) ------ACAGGCGTCGT--CGCTT|CGGT|---ATCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_socia_08NBEPT_0005 |CACCG|CGAC|CCGTTG|-GCG ------CAGCG|GCGGTC|---T-ACCGCGTCT-GG(CAG AGAGTCCCGG CGC- TCGGC TTCG------GTCGG GCG CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTCC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|AG-GTGCGGCGTCCT (GCGTTCCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) ------ACAGGCGTCGT--CGCTT|CGGT|---ATCCGA -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_neboissi_RBCAD_1701 |CACCG|CGAC|CCGTCG|-GCT ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGCCCCGG CGC- TCGGC TTCG------GCCCG GCA CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GTGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) GC------AGTCCTmTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGY -AC--- C|GGA---CCC|------GTCCCGGTCG|GCGGTG|- Chimarra_sp_1_BR_RBCAD_2513 |CACCG|CGAC|CCGTCG|-GC------GCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG CGC- TCGGC TTCG------GTCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GGCCGC|C-GTC|CGACGG|TAGAGAACGAGGATC|GGGTTC|G(GCGC ------ATCGCGC)GTC-CGA|A-TCG|GG-GAGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTCCC-GGGCGT) AC------AGTCCTCTGGGCAA AGGGGCGTCGT--CGCTT|CGAT|---CTCCGA -AC--- C|GGA---CCC|------GTCCCGGTCT|GCGGTG|- Chimarra_feria_PHIL_A6 |CACCG|CGAC|CCGTTG|-GCG ------TTGCG|GCGGTC|---T-ACCGCGTCC-GG(CAG AGAGTCCCGG TGC- TCGGC TTCG------GYCGG GCT CCGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|-(GCGC ------ATCGCGC)GTCCGGA|A-TCG|AG-GTACGGCGTCCT (GCGTTCCGGGCTC---CGGCGT TTC- -- R GCGTCGCAGTCCC-GGGCGT) GT------GGCCCCCCGGGCAA AGGGGCGTCGT--GGCTT|CGAT|---CTCCGA -AC--- A|GGA---CCC|------GTCCCGkTCG|GCGGTG|- Chimarra_pipake_08HMCAD_325_1W |nnnng|cgaC|ccgtcG|-gc------TtgcG|gcGgtc|-----aCcgcgtCc-GG(CAG AGAgtCCcGg agc- tcgac TtcG------gtCcG gct CcGgAatctg)ct-cGgcgtcgc|gaCcgC|c-gCC|cgacG-|tagagAacgaGgatc|ggctCc|g(gcgc ------atcgcgc)gct-cgg|a-tcG|GG-gcgctgcgtCct (gcgTTtcgGgctC---cGgcgT TTc- -- g gcgtcgCagtCc--gGgcgt) ct------gtGGgcgTcgt--cgtct|cGgT|---tcacgA -aC--- N|Ggag--tc-|------gtCCcg-tcG|gcGgtG|- Chimarra_bimbltona_HMTRI_103_1W |CACCG|CGAC|CCGTCG|-GCC ------TCGCG|GCGGTC|---A-ACCGCGTCC-GG(CAG AGAGTCCCGG AGC- TCaay TysG------ngA gct CTGGAATCTG)CT-CGGCGTCGC|GACCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GNCTNC|G(GCGC ------ATCGCGC)GCT-CGG|A-TCG|GG-GTGCGGCGTCCT (GCGTTTCGGGCTC---CGGCGT TTC- -- G GCGTCGCAGTTC--GGGCGA) TT------GTGGGCGTCGT--CGTCT|CGGT|---TCGCGA -AC--- T|GGA---GTC|------GTCCCGGTCG|GCGGTG|- Chimarra_usitatissima_RBCAD_0805 |CACCG|CGAC|CCTTCA|------CGCG|TCGGTC|---TTAACGCGTCCCGG(GAG[T]CAAGTCCCGG AA-- TCGGA TCCT------CACGGG TTCGG TT- TCGGAGTCTC)CTCAGGCGTCGG|GGCCGC|CGGTG|CGAAGG|TAGAAAACGAGGATC|GGATCC|C(GCGT ------CT ACGACGC)GTC-GTG|T-TCG|TC-GCGCGTGATCTC (GCGGGTCGCGGGC---TTCCGG TTCG -- T CCGTT--CCCGCGTGCCCGT) ------AGCGG TCGCGTATTCA-ACGCGA|CGTT|-CGTCTCGG -ACCGT A|TGA---TCC|------GTCCCTGTCG|GCGGTG|- Chimarra_sp_2_VEN_RBCAD_2425_1W |-----|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_morio_RBCAD_2399_1W |-----|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_paria_RBCAD_2407_1W |CACCG|CGAC|CCGtCg|------GgT-A------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_sp_8_BR_RBCAD_2438 |CACCG|CGNC|CCGTCG|------AGATGTG- --GGG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGGT CTCA------CG ACCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGCGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CCGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_sp_9_BR_RBCAD_2439 |CACCG|CGAC|CCGTCG|------GAAGG--- --TCG|GCGGTC|---TCATCGCGTCC-GG(GAG AAGGTCCCCG AGAT CCGGC CTCA------CG GTCGG GTA TCGGAGTCTC)CTCNGGCGTCGT|GGCCGC|C-GTT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGTCTC (GCGTCGGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CGACGT) ------AGGGATGCCGTTCCGTTT|CGAT|-CGTCTCGG -ACC-- -|GAA---TTT|TTTGATCC GTCCCGGTCG|GCGGTG|- Chimarra_beckeri_RBCAD_2360 |CACCG|CGAC|CCGTCG|------CGG------TCG|GCGGtC|---TCACCGCGTCC-GG(GAG AAGGTCCCGA AAT- CCGGC CTCA------CG GTCGG GTA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAAAAGACGAGGAtC|GgATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGTCTC (GCGTCGGGTGGGC---TTCCGG TTCG -- T CCGTT--cCCTCT-CGACGT) AT------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATm A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_straminea_UMC424_1W_D2 |CACCG|CGAC|CCGTCG|-GGT CA-A------C ACAAG|GcGGTC|---TCaCCGCGTCC-GG(gaG AaGGtCCCGA AGT- CCGGC TTTC------ACG GTCGG GCA TCGGAGTCTC)CTCmGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-Tcg|cG-ACGCGATACTTC (GCGCGAGGTGGGC---TTCCGG TTAG -- T CCGTT--CcCGCT-TCGCGT) ------AGTGGTGTCgn-nnnnnn|nnnn|-nnnnnnnn -nnnnn n|nnn---nnn|------|-nnnnn|- Chimarra_teresae_RBCAD_2418 |CACCG|CgAC|CCGTCG|-GGT TA-T------T CCAAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGAc CTCA------CG rTCGG GCA TCGGAGTCTC)cTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAacGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-TTGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATT A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_sp_4_BR_RBCAD_2428 |cACCG|CGAc|CCGtcg|-ggt TA-T------T cCAAG|GCggtc|---tcACcGCGTCC-GG(GAG AAAGTCCCCG AAG- tyGaC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCaGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-TTGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATT A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_mycterophora_RBCAD_2452 |CACCG|CGAC|CCGTCG|-GGT TA-T------T CCAAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-TTGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TA T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_peruviana_RBCAD_2454 |caccg|CGac|CCgtcg|-ggt ta-t------T cCAAg|gCggTC|---TCACCGCGTCC-GG(GAg AAAgTCccGA Agt- tcggC CTCa------CG GTCGG gca tcggAGTCtc)ctcagGcGTCGt|ggcCgC|C-GCT|CGACGG|tAGAAGaCGAgGaTc|GGATTC|c(GCGT ------ayaacGG)-TC-CGG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGTGGGC---TTCCGg tTcG -- T CCGTT--CCCGCT-TTACGT) ------AGGGGtGCCGT-CCGTtT|CGGT|-CGTCTCGG -AC-T- C|GGA---TCC|------GTCCCGGTCG|GCGGtG|- Chimarra_peruviana_D2_RBCAD_2453 |CACCG|CGAC|CCgtCG|-GGT TA-T------T CCAAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGGC CTCA------CG GTCGG GCA TCGgAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAaCGC)GTC-CCG|A-TCG|CG-AcGCGGtGcCTC (GCGCGAGGTGG-C---TTCCGg tTCg -- t ccgtt--Cccgct-Ttacgt) ------agg------|----|------|------|------|------|- Chimarra_piliferosa_RBCAD_2305 |CACCG|CGAC|CCGTCG|-GGT CA-T------T CCAAG|GCGGCC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGaC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGGGGTGGGC---TTCCGG TTAG -- G CCGTT--CCCGCT-CTGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_piliferosa_RBCAD_2304 |CACCG|CGAC|CCGTCG|-GGT CA-T------T CCAAG|GCGGCC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGGC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGGGGTGGGC---TTCCGG TTAG -- G CCGTT--CCCNCT-CtGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_brasiliana_RBCAD_2362 |CACCs|CGAc|CCGtCG|-GGt TA-T------T CCAAG|GCGGTC|---TCAcCGCGTCc-gG(GAG AAAgtcCCGA AGT- TCGGC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-TTGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATC A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_cultellata_RBCAD_2389 |CACCG|CGAC|CCGTCG|-GGT TA-T------T CCAAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGGC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCTCT-TTGCGT) GAT------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATs A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_parana_RBCAD_2406_1W |CACCG|CGAC|CCGTCG|GGGT TA-T------T CCAAG|GCGGTC|---TcaccGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGGC CTCA------CG GTCGG gCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAgGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|Cg-ACGCGGtGCCTC (GCGCgAGGTGGgC---tTcCGG TTCG -- T CCGTT--CCCGCT-TTACGT) ------AgGGGTGCCGT-CCGTTT|CGGT|-CGTCTygG -ACATT A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_sp_5_BR_RBCAD_2434 |CACCG|CGAC|CCGTCG|-GGT TA-T------T CCAAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGGC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAGGACGAGGATC|GGATTC|t(GCGT ------ATAACGC)GTC-CCg|A-TCG|CG-ACGCGGTGCCTC (GCGCGGGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CTGCGT) ------At aGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATT A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_sp_7_BR_RBCAD_2436 |CACCG|CGAC|CCGTCG|-GGT TA-T------T CCAAG|GCGGTC|---TCACCGCGTCC-GG(gAG AAAGTCCCGA AGT- TCGGC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-TTACGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATT A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_texana_08OFCAD_0854_OFCAD876 |CACCG|CGAC|CCGTCG|------TCGTG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGgcGTCGC|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATaacGC)Gtc-CCG|A-TCG|cG-ACgCGGTGCCTC (ACGCGAGGTGGGC---TTcCgG TTCG -- T CCGTT--CtCGCA-GCGCGT) ------AGGGGTgCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT N|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_camella_RBCAD_2457_1W |CACCG|CGAC|CCGTCG|--GT ------TCGCG|GCGGTC|----CA-AGCGCGC-CA(GAG AAGGTCCCGG nnnn nnnnn nnnnn------nnnn nCCCG CCN TCGGAGTCTC)----GGCGTCGC|GNCCGC|C-gCC|CGACgs|TAmAAGACGaGGAsm|kGATCc|g(GCGC ------TCGTckC)GTC-yCs|T-CCg|GG-ATGCGGCGCCT- (CCCGCTCGGACCT---CTGCGC -TC- -- T GCGty--GTAGGT-TCCGGG) CGyG------C AGGGGCGTCGA-C-GTCT|CGGT|-CGGCTCGG -AC--- A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_kontilos_RBCAD_2460_UMCHM101 |CACCG|CGAC|CCGTCG|--GT ------TCGCG|GCGGTC|-----GAAGCGCGC-CA(GAG AAGGTCCCGG CG-- CCGGG TTCAT------C CCCGG -CA TCGGAGTCTc)----GGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAAGACGAGGATC|GGATCC|G(GCGA ------TCGTCGC)GTC-CCG|T-CCG|GG-ATGCGGCGCCT- (CCCGCTCGGACCT---CTGCGC -TC- -- T GCGTC--GTAGGC-TCCGGG) CGTG------C AGGGGCGTCGT-C-GTCT|CGGT|-CCGCTCGG -AC--- A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_rosalesi_PHIL_W1 |CACCG|CGAC|CCGTCG|--GT -----AG---- -CGCG|GCGGTC|---TTGGCGCGTCG-AT(GAC T--GTCCCGG CG-- CCGGG TTCG------CCCGG -CA TCGGAGTCTC)----GGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|-(GCGC ------TcGTCGC)GTCCGCG|G-CCG|GG-ATGCGACGTCT- (CCCGTCCGGACCT---CTGCGT -TC- -- C GCGCA--GCAGGC-TCCGGG) CGT------CGGGGCGCCGT-A-GCCT|CGGT|-CCGCTCGG -AC--- C|GGA---TCC|------GGCCCGGtCG|GCGGTG|- Chimarra_maldonadoi_W3 |CACCG|CGAC|CCGTCG|------TCGCG|GCGGTC|---TAACCGCGTCCCGG(GAG AAGGTCCCGA CGT- CCGTC CGATCCGTAAAAAAGGTCT GTCGG -CG TAGGAGTCTC)CATCGGCGTCGT|GACCGC|C-GTA|CGACGG|TAGAAAACGAGGATC|GGATCC|-(GCGT ---GTTTTA TACGCGC)GTC-CGT|GTTCG|GG-ATACGGTACGTC (GCGTTCCGTGGGC---TTCCGG ATTA -A A CCGTT--CCCACG-GGGCGT) ------TAAAATAAA TTTGACGTGCT-GCGTTT|CGAT|-CATCTCGG -ACC-- G|TGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_odonta_RBCAD_2296 |CACCG|CGAC|CCGTCG|------TCGTG|GCGGTC|TTATCAACGCGTC--GG(TAG AAGGTCCCGG TGT- CCGGC TTCG------CG GTCGG -CG CCGGAGTCTA)C---GACGTCGC|GGCCGC|C-GCA|CGACGG|TAGAGAACGAGGATC|GGATTC|G(GCGC ------TCGTCGC)GTT-CTG|G-TCG|GG-TCACGACGTTTC (ACGTGTCGTGGGC---TTCCGG G-TG -- A CCGTT--CCCACG-GCCCGT) ------AGGAGCGGT-GCGGCC|CGAC|-CGTCTCGG -AC--- A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_rossi_PHIL_J5 |CACCG|CGAC|CCGTCG|------TCGCG|GCGGTC|TT-CCAACGCGTCTCGG(GAG AGAGTCCCGA TGT- CCGGC CTCA------CG GTCGG -CG TCGGAATCTC)CT-CGGCGTCGC|GGCCGC|C-GCT|CGACGG|TAGAAAACGAGGATC|GGATCC|-(GCGC ------TT CGAACGC)GTCCGTG|A-TTC|GG-TCACGACGTCTC (GCGTGTCGTGGGC---TTCCGG GTGA -- - CCGTT--CCCACG-GCCCGC) ------AGTGGCGGT-GCGGCC|GGAT|TCGTCTCGG -AC--- A|GGa---tcc|------gtcccggtcc|gcggtg|- Chimarra_patosa_RBCAD_2447 |CACCG|CGAC|CCGTCA|------TCGCG|GCGGTC|TC-CAAACGCGTCTCGG(GAG AGAGTCCCGA TGT- CCGGC CTCG------CG GTCGG -CG TCGGAATCTC)CTTCGGCGTCGC|GGCCGC|C-GCT|CGACGG|TAGAAAACGAGGATC|GGATCC|G(GCGA ------CAATCGC)GTC-CTG|A-CTC|GG-TCACGTCGTCTC (GCGCGTCGTGGGC---TTCCGG GTAA -- - CCGTT--CCCACG-GCGCCG) C------AGGGGCGGT-GCGGCC|GGGT|-CATCTCGG -AC--- A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_puertoricensis_PHIL_CP1 |cac??|????|??????|---- ??------?cg|ncGgTC|TC-TCAACGCGTC--GG(GNG AGAGCCCCGA CGT- CCGGc CTCG------CG GTCGG -CG TCNGAaTCTC)CT-TGGCGTCGC|GACCGC|C-GCT|CGACGG|TAGAAAACGAGGATC|GGATCC|-(GCGC ------TCGTCGC)GTCCGTG|G-CTC|GG-TCACGACGTCTC (GCGTGCCGTGGGC---TTCCGG GCA- -- A CCGTT--CCCACG-GCCCCA) ------GCGGCGGT-GCGGCC|GGGT|-CGTCTCGG -AC--- C|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_redonda_UMNEA831 |CACCG|CGAC|CCGTCG|------TCGCG|GCGGTC|TC-TCAACGCGTC--GG(GAG AGAGTCCCGA TGT- CCGGC TTCA------CG GTCGG -CG TCGGAATCTC)CT-TGGCGTCGC|GGCCGC|C-GCT|CGACGG|TAGAAAACGAGGATC|GGATCC|G(GCGC ------GTGTCGC)GTC-CTG|G-CTC|GG-TCACGACGTcTC (GCGTGTCGTGGGC---TTCCGG GTA- -- A CCGTT--CCCACg-GcCCGC) ------AGTGGCGGT-GCGGCC|GGGT|-CGTCTCGG -AC--- A|GGA---TCC|------GTsCCGgTcG|GCGGtg|- Chimarra_tachuela_RBCAD_2470 |caccr|craC|CCGTCG|------tCgtG|GCgGtC|tC-TTAgcgCGTC--gG(GaG AAGgTCCCGG tGT- CCGTC CGCA------A gGTCG gCG CCGGAGTCTC)CT-TGGCGt-GC|gACCgC|C-GCt|CGACGG|tAGARAACGAGGATC|GgATCC|G(GCGC ------TCGTCGC)GtC--TG|G-TTC|GGC-GACGACGTCTC (GCGTGtCGtGgGC---TTCCGG gC-A -- A CCGTT--ccCACG-GcCCGC) ------ACGGAGGCGGT-GtCGCC|GgGt|-CGtCtCgg -AC--- A|ggA---tcC|------GTCCCGgtCG|gcGGtG|- Chimarra_barinita_RBCAD_0646 |CACCG|cGAC|CCGTCG|-GGT AC-AT-----t ACAAG|GCGGTC|---TCaCCGCgTCC-gG(GAG AAAGTCCCGA AGT- TCGGC CTCA------CG GTCGG GCA TcGGAGTCTC)CTCaGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATTACGC)GTC-CCG|A-TCG|CG-ACGCGGTgCCTC (GCGCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CCGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TN -|GGA---TCC|------GTCCCGgTCG|GCGGTG|- Chimarra_albomaculata_UMNEA653_1W_Poor |CACCG|CGAC|CCGTCG|---- CA------T---G|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA rGT- CAGGC TTCA------CG GTCTG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GTT|CGACGG|TAGAAGACGAGGATC|GGATTC|g(GCGT ------TCAACGC)GTC-Ccg|A-TCG|TG-ACGCGGTGCCyy (mgGGsargNNGGs---yTTCsN GNT- -- y s------) ------|----|------|------|------|------|- Chimarra_barrettae_PHIL_K8 |CACCG|CGAC|CCGTCG|------TC------GTG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGC|GGCCGC|C-GCT|CGACGG|TAAAAGACGAGGTTC|GGATTC|-(GCGT ------ATAACGC)GTCCGCG|A-TCG|CG-ACGCGGTGCCTC (ACGCGAGGCGGGC---TTCCGG TTCG -- T CCGTT--CCCGTA-GCGCGT) ------AGGGGyGCCGT-CCGTTT|CGGT|-CGTCTCGG -ACATt A|GGA---tCC|------gtcccg-tct|gcg-t-|- Chimarra_cipoensis_RBCAD_2372 |CACCG|CGAC|CCGTCG|-GGT ATATTCTTATC ACAAG|GCGGCC|---TCACCGCGTCC-GG(GAG AAGGTCCCGA AAT- TCGGC TTCA------CG GTCGG GTA TCGGAGTCTC)CTCAGGCGTCGC|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GAATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCGAGGGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCACT-TCGCGT) ------AT AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TTC|------GTCCCGGTCG|GCGGTG|- Chimarra_immaculata_RBCAD_2307 |CACCG|CGAC|CCGTCA|-AGT TA-T------A TATAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GgCCGC|C-GCT|CGACGG|TAGCAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (ACACGAGGCGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CCGTGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_immaculata_RBCAD_2306 |CACCG|CGAC|CCGTCA|-AGT TA-T------A TAgAG|GCGGTC|---TCACCGCGTCc-Gg(gaG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GaCCGC|C-GCT|CGACGG|TAgtAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (RCACGAGGCGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CCGTGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_peytoni_RBCAD_2288_1W |CACCG|CGAC|CCGTCA|-AGt Tt-T------aTCAG|GCGGTC|---TCmCCGCGTCs-GG(GAG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GACCGC|C-GCT|CGACGG|TANNAGNCGAGGATC|GGATTC|C(GCGT ------ATAACGC)GTC-GCG|A-TCG|CG-ACGCGGTGCCTC (GCACGAGGCGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CCGTGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_peytoni_UM418_1W |CACCG|CGAC|CCGTCA|-AGT TT-t------aTCAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGCAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (ACACGAGGCGGGC---TTCCGG TTCG -- T CCGTT--CCCGCT-CCGTGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_distermina_RBCAD_2444 |CACCG|CGAC|CCGTCG|-AGT AG-AT------TCGAG|GCGGTC|---TCACCGCGTCC-GG(GAG AAAGTCCCGA AGT- TCGGC CTCG------CG GTCGA GCA TCGGAGTCTC)CTCAGGCGTCGT|GGCCGC|C-GCT|CGACGG|TAGAAGACGAAGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|G-TCG|TG-ACGCGATGTCTC (GCGTGGGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCTCT-CCGCGT) ------AGGGGTGCCGT-CTGTCG|CGAT|-CGTCTCGG -AC-TT t|GrA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarra_conica_RBCAD_2380 |CACCG|CGAc|CCGtCg|-CA- -g------ggg|GCGgcC|---tcaCCGCGTCC-GG(GAG AAGGTCCcGA AAT- TCGGC TTCA------CG GTCGG GTA TCGGAGTCTC)CTCAGGCgTcgt|gGCCGC|CCGCT|CGaCGG|TAGAAGACGAGGATC|GAATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGgtgcCTc (GCGAGGGGTGGGC---TTCCGG TTCG -- T CCGTT--CCCACT-TCGCGT) ------AGGGGTGCCGT-CCGTTT|CGGT|-CGTCTCGG -AC-TT T|GGA---TTC|------GTCCCGGTCG|GCGGTG|- Chimarra_aureopunctata_RBCAD_2278 |CACCG|CGAC|CCGTCG|------TCGTG|GCGGTC|---TCACCGCGTCC-GG(gAG AAAGTCCCGA AGT- TCGAC CTCA------CG GTCGG GCA TCGGAGTCTC)CTCAGGCGTCGC|GGCCGC|C-GCT|CGACGG|TAGAAGACGAGGATC|GGATTC|G(GCGT ------ATAACGC)GTC-CCG|A-TCG|CG-ACGCGGTGCCTC (GCgCGAGGTGGGC---TTCCGG TTCG -- T CCGTT--CCcGCA-GCGCGC) ------AGGGGTgCCGT-CCGTTT|CGGT|-CGNCTCGG -ACATC A|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarrhodella_ulmeri |-----|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarrhodella_peruviana_RBCAD_0780 |CACCG|CGAC|CCGTCG|-GCG ------TAGCG|GCGGTC|---TCAACGCGTCC-GG(GAG AAAGTCCGGA CGG- TCGGC TTCG------CG GCCGG CCG TCCGAGTCTC)CTCAGACGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|C(GCGC C------T CGCGCGC)GTC-GTG|A-TCG|TG-CCGCGGCGCTCC (GCGTCCCGGA------CCTCGG GACC TC G TTGTC-TCGCATGCTCCGGG) CGTTCTCCTCCCGACGGGAGGATAAG GAGCGTCGTCTTTCGGCG|CGGT|-CGTCTCGG -ACA-- -|GGATCTTCC|------GTCCCGGTCG|GCGGTG|- Chimarrhodella_peruviana_RBCAD_0785 |CACCG|CGAC|CCGTCG|-GCG ------TAGCG|GCGGTC|---TCAACGCGTCC-GG(GAG AAAGTCCGGA CGG- TCgGC TTCG------CG GCCGG CCG TCCGAGTCTC)CTCAGaCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|C(GCGC C------T CGCGCGC)GTC-GTG|A-TCG|TG-CCGCGGCGCTCC (GCGTCCCGGA------CCTCGG GACC TC G TTGTC-TCGCATGCTCCGGG) CGTTCTCCTCCCGACGGGAGGATAAG GAGCGTCGTCTTTCGGCG|CGGT|-CGTCTCGG -ACA-- -|GGATCTTCC|------GTCCCGGTCG|GCGGTG|- Chimarrhodella_pilcopata_RBCAD_2478_1W |CACCG|CGAC|CCGTcg|GGcG ------TcGCG|GCgGTc|---tCAAcgcgtcc-cg(Gag AAAgTCCGGA CGG- TcggC Cctaa------tCag gtcgg CCG TcCgAgTctc)cTCaGacgTcGC|GGcCGC|C-gCC|CGACGG|TagaGAacGAGGATC|GGTTCC|G(gCCC gAAtTCaCA ACAGGGc)gtCCgtG|A-TCG|Gg-cCGCGGcGCTCC (GCGTCCCGGA------CCTCGG GGCC CA G TTGTC-CCGCATGCTCCGGG) CGTTCTCCTCCCGACGGGAGGATAAG GAGCGCCGTc-TTCGGCT|CGAT|-CGTCTCGG -ACA-- -|GGA---TCC|------GTCCCGGTCG|GCGGTG|- Chimarrhodella_nigra_RBCAD_0777_1W |CACCG|CGAC|CCGTCG|-GCG ------TAGCG|GCGGTC|---TCAACGCGTCCCGG(GAG AGAGTCCGGA CGG- TGGGC TTCG------CG GCCAG CCG TCCGAATCTC)CTCAGGCGTCGC|GGCCGC|C-GCC|CGACGG|TAGAGAACGAGGATC|GGATCC|A(GCCC GATTTT--A ACGGCGC)GTCCGTG|A-TCG|GA-CCGCGgCGCTCC (GCGTCCCGGA------NCTCGG GGCC CA G TTGTC-TCGCATGTTCCGGG) CGTTCTCCTCCCGACGGGAGGATAAG GAGCGCCGtA-TTCGGCC|CGAT|-CGtCTCGG -ANA-- -|GGA-TTTCC|------GTCCCGGTCG|GCGGTG|- Chimarra_marginata_PHIL_Q13 |cacc?|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_bertrandi_PHIL_Q17 |-----|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|- Chimarra_n_sp_E_PHIL_Q18 |-----|----|------|------|------|------(------)------|------|-----|------|------|------|-(------)------|-----|------(------) ------|----|------|------|------|------|-

[ 26 28 29 30 31 ] Unaligned ------88888-888888------999999999999------00000 0000000000000000000000000000000000000000 Chimarra_akkaorum_08HMCAD_099 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA AGGA------A TAAA-CCCTGAGgC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG TtCC GGCCCG CAgTCcC)GgG-C gttc------Chimarra_akkaorum_HMTRI_098 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA AGGA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG t-CC GgcCCG CAgtccc)NgG-C gT-cGA------Chimarra_monorum_HMTRI_095 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA AcGA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)aAA(GGGACGATGGCGAACGGCT------CGCCG T-CC GGCCCG CAgTccC)GGg-C gT-cg------Chimarra_ambulans_RBCAD_0559 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTA------A TaAA-CCCTGAGGC)GCa(aTGAAAGT)GAAA------(GGCCT------CACGACC)GAA(GGGACGATGGCgAACGTCG------AGGCG TTCC GGCCCG CAGtCCC)GGG-G GTTC------Chimarra_ambulans_RBCAD_0558 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGyCT------CACGNCC)GAN(GNNACGAtgGCGAACGTCg------aggCg T-CC gGCC-G C------)------Chimarra_augusta_RBCAD_0553 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCaTGCgCGCGA(GTCATAgGgA ayTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)gAA(GGGACGATGGCGAACGGCT------)------Chimarra_augusta_RBCAD_0554 gttacgTtTCGgGAACTCACAGGAcCCGTCTTGAAACacgGACCAAG|GAGTC|TagcatGcgCgCgA(gTCATAGGgA atTA------A TaAACCCCTGaGGc)gCa(aTGAAAGT)GAaa------(ggCCT------CACGgCC)rAr(GGGAcgatggcrAACGGcT------CGccG TTCy GsCCCG CAGtccC)GGGGC GTTCGGagAAA------Chimarra_fuscipes_RBCAD_0593 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGaAACACGGaCCAAG|GAGTc|TaGCATGCGCGCGA(GTCATAGGGA TTCA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAa------(ggCCT------CACGGCC)GAa(GGGACGATGGCGAACGGCT------CGCCg ttCN NNNGCr ymcTC--)------Chimarra_fuscipes_RBCAD_0593 GTTACGTTTCGGGAAcTcaCaGGACCCGTCTTGAAaCaCGGaCCAAG|GAGTy|TaGCATGCGCGCGA(GTCATAGGGA TTCA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAa------(ggCCT------CACGGCC)GAa(GGGACGATGGCGAACGGCT------CGCCg t------)------Chimarra_angustipennis_08OFCAD_0824 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTg------A TAMA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)gAA(GGGACGATGGCGAACGGCT------CGCcg ttCC ggcCCG CAgtctC)gg------Chimarra_limon_RBCAD_0597 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CaCggcc)aga(ggGACGATGGCGAAcggcT------CgCCG T-cc ggctc- cagT---)------Chimarra_aterrima_RBCAD_1500 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG T-CC GGCCCG CAgTCCc)GgG-C GT-CGAgAA------Chimarra_duckworthi_RBCAD_0579 gttacgtttcgggaacTcac-ggaCccgtcttgaaacacgGACCAAG|GAGTC|Tagcatgcgcgcga(gtcataggNN N--N------N NNaa-ccctgagGN)Nca(atgaaNgt)gaa------(ggcct------cacg---)---(------)------Chimarra_centralis_UMC286_1W_Poor gTTTTGCTTCGggcACtcACagGaCcCgTCTTGAAACACGGANCAAg|GAgTc|TNGCATsTGCGCGa(gtcaT------)---(------)------(------)---(------)------Chimarra_chiangmaiensis_1W_08HMCAD_245 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA AyCG------AG TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACgrcc)GaA(gGGACGATgGcgaACGGCT------CGCCG TTCC TGCCCG CAGTCCC)GGG------Chimarra_flinti_RBCAD_0590_D2mid_1W gtTACGTTTCgggAacTCaCAGGaCCCGTCTTGAAACACGGaCCAAG|GagTc|tAGCATGCGCGCGA(GTCATAGGGA AgTr------A TAAA-CCCTGAGGC)gca(atgaaaGT)gaNN------(ggCct------cNCNNNc)gaa(NNgACGATggcgaaCGgct------)------Chimarra_suadulla_08HMCAD_247 GTTCCGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGAC-AAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGGACGgtC------CGCCg TCCT GGCCCG CAGTCCC)GGGgC GTTCGGAgAAaTGCcAcCGT-GcgATTATCCGGacGCAc- Chimarra_joliveti_08HMCAD_242 GTTCCGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGGACGGCA------CGCCg TCCT GGCCCG CAgTCCc)GGG-C GT-CG-AgAAATGCNANCgT-GCGATTATcC------Chimarra_lannaensis_HMCAD_105_D1_2_1W ------|-----|------(------)---(------)------(------)---(------)------Chimarra_oreithyia_08HMCAD_227 GTTCCGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGGACGgTC------CGCCg TCCT GGCCCG CAgtccc)gGG-C gtTCGAGAA--tGCCaCCgt-GCGAT------Chimarra_tsudai_PHIL_CT1 ------CAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGGACGGTC------CGCCG TCCT GGCCCG CAGTCCC)GGGGC GTTCGGAGAAATGCCACCGT-GCGATTATCCGGACGCACC Chimarra_megara_08HMCAD_226 GTTCCGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGGACGGTC------CGCCG TCCT GGCCCG CAGTCcC)ggG-C GTCGAGAA------Chimarra_spinifera_08HMCAD_241_1W GTTCCGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGGACGgTC------CGCCg TCCT GGCCCG CAGTC--)------Chimarra_poolei_RBCAD_0619_D2mid_1W GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CaCGNcc)raa(gggACGATGGCGAACGGCT------CGCCG tTcC ------)------Chimarra_uranka_RBCAD_0632 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA TTCA------TAC TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)AGA(GGGACGATGGCGAACGGCn------nGCCG TCaC GGcccG CagTCcC)gGgGC GttCgAgaaagctC------Chimarra_protuberans_RBCAD_2310 ------AAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA wtTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------Cacg-cc)gar(ggGACGATGGCGAACGGCT------CGCCG tnCC gGCcnG cagtcc-)------Chimarra_rhamphodes_RBCAD_2308 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CaCGgcc)gar(ggGACGATGgCGAACGGcT------cgccg T-CC gGcC-G CAgTCTC)------Chimarra_adamsae_RBCAD_2484 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA AGTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCcg ttcc GgcCCG CAgT---)------Chimarra_sp_1_BOL_RBCAD_2520 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GgCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG tTCC ggCC-G CA-----)------Chimarra_platyrhina_RBCAD_0615 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG T-CC ggcccG CAgt---)------Chimarra_villalobosi_RBCAD_0636_1W GttACGtTTCGGGAACTCACAGGaCCcgTcttgaaACaCgGaNCAAG|GAgTc|tagCAtGcGcgcGa(gtyataggga attg------taaa-CCcTgAggN)gCA(atgAANNN)GAAA------(g------)---(------)------Chimarra_obscura_PHIL_R5 ------CAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ACTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCC------CGCCG TTCC GGCCCG CAGTCCC)GGGGC GTTCGGAGAAATGCCTCCGT-GCGATTATCCGGACGCACC Chimarra_socia_RBCAD_1497 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)rAA(GGGACGATGGCGAACGGCA------CGCCG T-cC GgcCCG CAgTCcC)GGg-c gtcgmgAANgc------Chimarra_socia_08NBEPT_0005 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCA------CGCCG T-CC gGCCCG CAgtccc)gG--C gTCGAgAAagCcctggt------Chimarra_neboissi_RBCAD_1701 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA TTGA------GTA TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG T-CC GgCCCG CAGTccc)ggg-c GTcgga------Chimarra_sp_1_BR_RBCAD_2513 GTTACGTTTCGGGAACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG T-CC GgCcCG CAgTc--)------Chimarra_feria_PHIL_A6 nTTACGtttcgnGAACTcacagnaccngtctnga??nnnnnnnCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ACTA------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGTC------AGCCG TTCC GGCCCG CAGTCCC)GGGGC GTTCGGAGAAATGCCTCCGT-GCGATTATCCGGACGCACC Chimarra_pipake_08HMCAD_325_1W gTtacgTTtcGGgcactcacaggaCCcgtcTtgAAaCacGGACCAAG|GAGTC|Tagcatgcgcgcga(gtcataGggN NN-A------A TAGA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG TtcC ggcccg CAgTcc-)------Chimarra_bimbltona_HMTRI_103_1W GTTACGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA GTTA------A TAGA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGgCT------CGCCG T-CC GgCcCG CAgTCcC)ggG-C gT-cg------Chimarra_usitatissima_RBCAD_0805 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTACGCGA(GTCATAGGGA TTACATTTTTTCATAAC TAAA-CCCTGAGGC)GTA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGCC-G------TGAGGTCCN TCCC TGCTCG CAgTCcc)ggg------Chimarra_sp_2_VEN_RBCAD_2425_1W ------|-----|------(------)---(------)------(------)---(------)------Chimarra_morio_RBCAD_2399_1W ------|-----|------(------)---(------)------(------)---(------)------Chimarra_paria_RBCAD_2407_1W ------|-----|------(------)---(------)------(------)---(------)------Chimarra_sp_8_BR_RBCAD_2438 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCC------)------Chimarra_sp_9_BR_RBCAD_2439 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA A------CC-CTCACAA TAAA-CCCTGAGGC)GCA(ATGAAAgt)gaac------(------G)TTA(GGGACGATgGCGGACGGTG------Cgccg tcct GCC------)------Chimarra_beckeri_RBCAD_2360 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA T------GCCAT TACA-CCCTGAGGC)GCA(ATGAAAgT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCg TCCC G------)------Chimarra_straminea_UMC424_1W_D2 nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn|nnnnn|nnnnnnnnnnnnnn(nnnnnnnnnn nnnn---nn-nn-nnnn nnnnnnnnnnnnnn)nnn(nnnnnnnn)nnnn------(nnnn------nnnnnnnn)nnn(nnnnnnnnnnnnnnnnnnn------nnnnn nnnn nn------)------Chimarra_teresae_RBCAD_2418 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)gAac------(------G)ttA(gGGACGATGGCGGACGGTg------cgcCg tCct ggccCg CAgT---)------Chimarra_sp_4_BR_RBCAD_2428 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAgT)GAAc------(------G)tTA(GGGACGATGgCGGACGGTG------CGCCg TCCT GGCCCg CAgt---)------Chimarra_mycterophora_RBCAD_2452 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCg TCCT ggcccg CAGtcCC)GGGGN GTTTCGAGAAATGCCATCGT-GC------Chimarra_peruviana_RBCAD_2454 GTtttggttCGGGCACTcaCagGaCCCGTCNtgaaaCACGGGCCAAG|GAGTC|TaGCATGtGCgCGA(GTCATagggA atCA------TTc gaar-cccTgAggc)gCA(atgNNNNt)NaN------(------N)Nta(gggacGatg--cgaCgrtg------cgC-g ------)------Chimarra_peruviana_D2_RBCAD_2453 ------|-----|------(------)---(------)------(------)---(------)------Chimarra_piliferosa_RBCAD_2305 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------g)Tta(GgGACGATGGCgGACGGTG------Cgcys TCct gcCsCG CAgT---)------Chimarra_piliferosa_RBCAD_2304 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCG TCCT gGcCCG CAgtcyc)GggGT GTTTCGAG------Chimarra_brasiliana_RBCAD_2362 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA -TCA------TTC gaAa--cctGAGGC)gCA(AtgAAAgt)caac------(------G)ttA(gggacGATggcggaCGGtG------cgccg tcmt g------)------Chimarra_cultellata_RBCAD_2389 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAc------(------G)TTA(GGGACGATGGCGGACgGTG------Cgccg tCct ggccCG C------)------Chimarra_parana_RBCAD_2406_1W GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAgT)GAAc------(------G)tTA(GGGACGATGgCggaCGGTG------CGCCg TCCT g-cc-g CA-T---)------Chimarra_sp_5_BR_RBCAD_2434 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCg TCCT GGCCCG CAgTc--)------Chimarra_sp_7_BR_RBCAD_2436 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCc- TC------)------Chimarra_texana_08OFCAD_0854_OFCAD876 GTTNTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TTC GAAA-CCCTGAGGC)GCA(ATGAAAGT)gAaC------(------g)t-a(NNgAcGATGgcgTCcaGTr------cgccc ------)------Chimarra_camella_RBCAD_2457_1W GTTATGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATTG------A TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGGGATCGGTG------CGCCG T-CC gTCCCG CA-----)------Chimarra_kontilos_RBCAD_2460_UMCHM101 GTTATGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATTC------G TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GG-ACGATGGGGGTCGGTG------CGCCG ACCC GTCCCG CAGTCcc)gGG-C GTTTCNNGAAATGccATCNT-TG------Chimarra_rosalesi_PHIL_W1 GT-TTGCTTCGGgCACTCACAGGACCCGTCTTGAAaCAcggacCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ACTC------G TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGGGGTCGGCG------CGCCG TCCC GTCCCG CAGTCCC)GGGGC GTTTCGAGAAATGCCATCGT-GCGATTATCGAGACGCACC Chimarra_maldonadoi_W3 ???????????????????????????????????????????CAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGG ATTA------T TAAA-CCCTGAGGC)CCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGCGAT------AAAACGTCG TCCC GGCCCG CAGTCCC)GGGGT GTTTCGAGAAATGCCATCGT-GCGATTATCGAGACACACC [GAGAGCGTACACGCTGG GA CC CGAAAGATGG*TGAACTATGCCTGG] Chimarra_odonta_RBCAD_2296 GTTCTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCT------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TtA(GgGACGATGGCGAACGTCT------CGTCG TCCT -GCCCG CAgTcC-)GGGGT GTTTCGAGAANTGNCNCCGT-GCG------Chimarra_rossi_PHIL_J5 gtttngctccgggcaC------AAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA TTAT------CCATAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGAACGGTT------CGCCG TTCC CGCCCG CAGTCCC)GGGGT GTTTCGAGAAATGCCATCGT-GCGATTATCGAGACTCACC Chimarra_patosa_RBCAD_2447 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA TTCG------TAAAA TAAA-CCCTGAGGC)GCA(AtGAAagt)gaac------(------G)tta(gggAcGATGGCGAaCGaTC------CgTcg ttcT -gcccg CA-T---)------Chimarra_puertoricensis_PHIL_CP1 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCACAGGGA CCTC------GA TAAG-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGAACGGTT------CGCGCCG TTCC CGCCCG CAGTCCC)GGGGT GTTTCGAGAAATGCCACCGT-GCGATTATCGAGACTCACC Chimarra_redonda_UMNEA831 GTTtygCTtCgGGCACTCNCAgGaccCgTCTtGAAACaCgGACCAAG|GAGTC|TagCATGtGCcCGa(gtcaCAGgGA tCCA------gA taAA-CCcTGAgGC)gCA(AtGAaagt)ga-C------(------N)yTa(GsGAcGanNNCGAGcG------)------Chimarra_tachuela_RBCAD_2470 GtTATGCTTCGgGCACTCACAGGACCCGTCTTGAaACACGGACCAAG|GAGTC|TAgCATGtgcgCGA(GtcAtAggGA GCgA------A TAgA-CCCTgAGGC)gCA(aTGAAagt)gAAC------(------g)tta(gggAcgATgsCgAGcGgCc------CArgccg ------)------Chimarra_barinita_RBCAD_0646 GTTTTGCTTCGGGCACTCACaGGACCCGTCTTGAAaCaCGGACCAAG|GAGTc|TaGCATGTGCGCGA(GTCATAGGGA -TCA------CAT TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCG TCCT GGCCCG CAGTCcc)ggggt ------Chimarra_albomaculata_PHIL_Q21 ------CAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATCG------AAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCG TCCT GGCCCG CAGTCCC)GGGGT GTTTCGAGAAATGCCATCGT-GCGATTATCGCGACACACC Chimarra_barrettae_PHIL_K8 gtttgctccgcatcaaa??????????????------CAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCG TCCT GGCCCG CAGTCCC)GGGGT GTTTCGAGAAATGCCATCGT-GCGATTATCGAGACACACC Chimarra_cipoensis_RBCAD_2372 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ATTG------AAT TAGA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCg TCCC GGCCCG CAgtC--)------Chimarra_immaculata_RBCAD_2307 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCg TCCT -gcCCG CAgTctc)g------Chimarra_immaculata_RBCAD_2306 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GNGACGATGGCGGACGGTG------CGCCg TCCT ------)------Chimarra_peytoni_RBCAD_2288_1W GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------g)kkr(ggGACGATGGCGGACGGTG------CGCCG TCct -GcCCG CaGTctC)------Chimarra_peytoni_UM418_1W GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TAC GAAA-CCCTGAGGC)GCA(ATGAAANT)NAAc------(------g)kkr(ggGACGATGGCGGACGGTG------CGCCg TCct -gcccG CAGT---)------Chimarra_distermina_RBCAD_2444 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA ACTA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAC------(------G)TTA(GGGACGATGGCGGACGGTG------CGCCg TCCT gGCCCG CAGTc--)------Chimarra_conica_RBCAD_2380 GTTTTGCTTCGGGCACTCaCAGGACCCGTCTTGAAAcaCGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA TGAG------gt tAA--CCcTGAGGC)gCA(a-gaAagt)gAac------(------G)tTA(GGGAcGATGGCgGaCGgtG------cgC-G t------)------Chimarra_aureopunctata_RBCAD_2278 GTTTTGCTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCA------TAC GAAA-CCCTGAGGC)GCA(ATGAAAGT)GaAC------(------g)tkr(gGGACGATGgCGgaCGgTG------CGCCg TCCT GgcCCG CAgTC--)------Chimarrhodella_ulmeri ------|-----|------(------)---(------)------(------)---(------)------Chimarrhodella_peruviana_RBCAD_0780 GTTTTGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTCC------AC TAAA-CCCTGAGGC)GTA(ATGAAAGT)GAACAGCGC-CGCGTTCTC(GGTCCTCCGGGG--CCGAGTGTCCGGCC)GCA(GGGACGATGGCGGACGGCCGATTTTCACGTTGACCg tCCT CGCCCG CAgtccc)gggcg t---cgAgAaa-gC-tccgt-g------Chimarrhodella_peruviana_RBCAD_0785 GTTTTGTTTCGGGCACTCACAGGACCCGTCTTGAAACACGGACCAAG|GAGTC|TAGCATGTGCGCGA(GTCATAGGGA GTAC------AC TAAA-CCCTGAGGC)GTA(ATGAAAGT)GAACAGCGC-CGTGTTCTC(GGTCCTTCGGGG--CCGGGTTTC-GGCC)GCA(GGGACGATgGCGGaCGGCC------)------Chimarrhodella_pilcopata_RBCAD_2478_1W GTTTTGTTTCGGGCACTCACAGGA------|-----|------(------)---(------)------(------)---(------)------Chimarrhodella_nigra_RBCAD_0777_1W GTTt-GtTTCgGGCACTCACAGGACCCGTCTTGAA-CACGGACCAAG|GAGTC|TAGCatGTgcgCgA(GTCATAGGgA GAcT------C TAGA-cCCTGAGGC)---(ATGaAaGT)GACaGCGTCGgacGATTTT(TTTTTTTttaaAAAAAAATCTTTCGACC)GCA(GGGACGATGGCGGACGgCCGATTT-CGCGtTGaccg t-ct cGCCCG C------)------Chimarra_marginata_PHIL_Q13 ------CAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCG------AA TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG TTCC GGCCCG CAGTCCC)GGGGC GTTCGGAGAAATGCCTCCGTTGCGATTATCCGGACGCACC Chimarra_bertrandi_PHIL_Q17 ------CAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATCA------T TAAA-CCCTGAGGC)GCA(ATGAAAGT)GAAA------(GGCCT------CACGGCC)GAA(GGGACGATGGCGAACGGCT------CGCCG TTCC GGCCCG CAGTCCC)GGGGC GTTCGGAGAAATGCCTCCGTTGCGATTATCCGGACGCACC Chimarra_n_sp_E_PHIL_Q18 ------CAAG|GAGTC|TAGCATGCGCGCGA(GTCATAGGGA ATKA------A TAAA-CCCTGAGGC)GCA(ATAAAAGT)GAAA------(GGCCT------CACGGCC)AGA(GGGACGATGGCGAACGGYT------CGCCG TTCC GGCCCG CAGTCCC)GGGGC GTTCGGAGAAATGCCTCCGTTGCGATTATCCGGACGCACC ;end; charset unaligned=1-17 591-601 744-752 838-857 1014-1025 1121-1132 1155-1199; Fig. ES2 Fig. ES3