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Phylogenetic Relationships of Brown Frogs from Taiwan and Japan Assessed by Mitochondrial Cytochrome B Gene Sequences (Rana: Ranidae)
ZOOLOGICAL SCIENCE 15: 283–288 (1998) © 1998 Zoological Society of Japan Phylogenetic Relationships of Brown Frogs from Taiwan and Japan Assessed by Mitochondrial Cytochrome b Gene Sequences (Rana: Ranidae) Tomoko Tanaka-Ueno1*, Masafumi Matsui1, Szu-Lung Chen2, Osamu Takenaka3 and Hidetoshi Ota4 1Graduate School of Human and Environmental Studies, Kyoto University, Sakyo-ku, Kyoto 606-01, Japan 2Department of Zoology, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-01, Japan 3Primate Research Institute, Kyoto University, Inuyama, Aichi 484, Japan 4Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa 903-01, Japan ABSTRACT—In order to assess phylogenetic relationships of Taiwanese brown frogs (Rana longicrus and the R. sauteri complex), the partial sequences (587 base pairs) of the mitochondrial cytochrome b genes were compared with six brown frogs from Japan (R. pirica, R. ornativentris, R. japonica, R. tagoi tagoi, R. tsushimensis, and R. okinavana). Resultant phylogenetic trees indicated a considerable genetic differentia- tion between R. longicrus and R. japonica in spite of their close morphological and ecological similarities. The R. sauteri complex includes two genetically distinct groups that are not consistent with current classifica- tion. One group including populations of Alishan (central Taiwan) and Sanyi (western Taiwan) seemed to be closest to R. tagoi and the presumptive common ancestor of these frogs is thought to have diverged very early. Another group including a population from Wulai (northern Taiwan) showed a sister relationship with R. tsushimensis and R. okinavana, both isolated on small islands of Japan. These Taiwanese and Japanese brown frogs as a whole form a monophyletic group, and separation of the R. -
Geographical Variations of Rana Seuterl (Anura: Ranidae) in Taiwan
Zoological Studies 36(3): 201-221 (1997) Geographical Variations of Rana seuterl (Anura: Ranidae) in Taiwan 2 Wen-Hao ChOU 1,2, * and Jun-Yi Lin IZoology Division, National Museum of Natural Science, Taichung, Taiwan 404, R.O.C. Tel: 886-4-3226940 ext. 506 Fax: 886-4-3230787 E-mail: [email protected] 2Department of Biology, Tunghai University, Taichung, Taiwan 407, R.O.C. (Accepted April 14, 1997) Wen-Hao Chou and Jun-Yi Lin (1997) Geographical variations of Rana sauteri (Anura: Ranidae) in Taiwan. Zoological Studies 36(3): 201-221. Rana sauteri is widely distributed in hills and mountains of Taiwan from 100 to 3000 m in elevation, a range including SUbtropical to cool temperate climatic zones. Both the gastro myzophorous tadpoles and adults have distinct geographical variations in morphology. Clinal variation in the shape of the upper jaw sheath and the number of labial tooth rows occurs from the foothills of western Taiwan eastward through the Central Mountain Range to the eastern slopes of the Central Mountain Range. This geographical pattern is supported and validated by multivariate analyses of adult morphology. Ac cording to the dispersal hypothesis, this geographical pattern may suggest that the dispersal center (= initial range of the ancestral group) was located in the western foothills, and it may indicate that the population expanded radially through the clinally variable transition zone to areas adjacent to the ridge of the Central Mountain Range (= range of the derived group). However, the establishment of the geographical pattern of R. sauteri seems to be better explained by the vicariance hypothesis which supports the occurrence of isolation-based dichotomous divergence within this grossly defined taxon. -
Elevational Variation in Reproductive and Life History Traits of Sauter's
Zoological Studies 42(1): 193-202 (2003) Elevational Variation in Reproductive and Life History Traits of Sauter’s Frog Rana sauteri Boulenger, 1909 in Taiwan Su-Ju Lai1,2, Yeong-Choy Kam3 and Yao-Sung Lin1,* 1Department of Zoology, National Taiwan University, Taipei, Taiwan 106, R.O.C. 2Zoology Division, Taiwan Endemic Species Research Institute, Chichi, Nantou, Taiwan 552, R.O.C. 3Department of Biology, National Changhua University of Education, Changhua, Taiwan 500, R.O.C. (Accepted October 23, 2002) Su-Ju Lai, Yeong-Choy Kam and Yao-Sung Lin (2003) Elevational variation in reproductive and life history traits of Sauter’s frog Rana sauteri Boulenger, 1909 in Taiwan. Zoological Studies 42(1): 193-202. Sauter’s frog, Rana sauteri Boulenger, 1909 in the west-central part of the Central Mountain Range of Taiwan at eleva- tions of 300 to 2360 m showed obvious elevational clines in reproductive and life cycle traits. With an increase in elevation, the breeding season and the periods of calling, aggregation, and egg deposition of mature frogs shifted from fall and winter (Oct. to Dec.) to spring (May), while the breeding period decreased but the larval period increased. Also, adult females at high elevations were larger and produced smaller clutch sizes but larg- er eggs and tadpoles. The temperature experiment showed that low temperatures in winter at high elevations and high temperatures in summer at low elevations are the primary environmental factors that define the breed- ing success of the species. Rana sauteri has experienced long-term selection by environmental factors (e.g., temperature), resulting in populations at high elevations breeding in spring and populations at low elevations breeding in fall and winter to ensure that their tadpoles can grow and complete metamorphosis. -
(Amphibia: Ranidae) on Sumatra, Indonesia
Phylogenetic systematics, diversity, and biogeography of the frogs with gastromyzophorous tadpoles (Amphibia: Ranidae) on Sumatra, Indonesia Dissertation zur Erlangung des Doktorgrades Fachbereich Biologie An der Fakultät für Mathematik, Informatik und Naturwissenschaften der Universität Hamburg Vorgelegt von Umilaela Arifin Hamburg, 2018 Tag der Disputation: 25 January 2019 Folgende Gutachter empfehlen die Annahme der Dissertation: 1. Prof. Dr. Alexander Haas 2. Prof. Dr. Bernhard Hausdorf “To reach the same destination, some people might only need one step but some other people might need two, three, a hundred, or a thousand steps. Never give up! Some are successful because they work harder than other people, not because they are smart.” –dti- Preface Preface It is such a relief to have finally finished writing this dissertation entitled “Phylogenetic systematics, diversity, and biogeography of the frogs with gastromyzophorous tadpoles (Amphibia: Ranidae) on Sumatra, Indonesia”. Thank to Allah, who has always embraced me in any situation, especially during my doctoral studies. The work I have done over the past five years is dedicated not only to myself, but also to all the people, who came into my life for various reasons. Also, this thesis is my small contribution to Indonesia (the “Ibu Pertiwi”) and its fascinating biodiversity. I hope to continue actively contributing to the field of herpetology in the future, simply because it is my greatest passion! During my childhood, especially through my high school years, it never crossed my mind that I would end up becoming a scientist. Coming from an ordinary Indonesian family and living in a small town made my parents worry about the education their children would need, in order to have a better life in the future. -
Intraspecific Relationships of Populations of the Brown Frog Rana Sauteri (Ranidae) on Taiwan, Inferred from Mitochondrial Cytochrome B Sequences
ZOOLOGICAL SCIENCE 26: 608–616 (2009) ¤ 2009 Zoological Society of Japan Intraspecific Relationships of Populations of the Brown Frog Rana sauteri (Ranidae) on Taiwan, Inferred from Mitochondrial Cytochrome b Sequences Nian-Hong Jang-Liaw1* and Tsung-Han Lee2 1Department of Zoology, National Museum of Natural Science, 1st Kuang-Chien Rd., Taichung 40453, Taiwan 2Department of Life Sciences, National Chung Hsing University, 250 Kuo-Kuang Rd., Taichung 40227, Taiwan We studied the phylogenetic relationships among populations of Rana sauteri using partial sequences of the mitochondrial cytochrome b gene from 244 samples from 29 localities in Taiwan. We detected 77 haplotypes among these sequences. The phylogenetic trees contained five distinct lineages: the northern (NL), eastern (EL), southern hill (SHL), northern mountain (NML), and south- ern mountain (SML) lineages, defined by geographical distribution. The lineage phylogeny did not support the two-species hypothesis inferred from larval morphology. To describe the possible col- onization history of R. sauteri in Taiwan, we propose hypotheses of within-island differentiation and a multiple-invasion model. Using a molecular clock, we estimated the order of divergence times between lineages in order to test the migration hypothesis. The multiple-invasion model was well supported by the phylogeny and a nested clade network. Key words: Rana sauteri, mtDNA, cytochrome b, phylogeography, Taiwan include Guangxi Province, China (Tian and Jian, 1986; Zhao INTRODUCTION and Adler, 1993). Unfortunately, no specimens of R. sauteri Taiwan is a subtropical island located between 21°53’N from China were located for examination. Smith (1921) and 25°37’N, with mountains up to 3952 m high. -
Taipei Frog Rana Taipehensis As an Example H.-C
90 AMPHIBIAN CONSERVATION Int. Zoo Yb. (2008) 42: 90–98 DOI:10.1111/j.1748-1090.2008.00049.x Involving local communities in amphibian conservation: Taipei frog Rana taipehensis as an example H.-C. LIN1, L.-Y. CHENG2, P.-C. CHEN3 & M.-H. CHANG4 1CEO Wildlife Conservation & Research Center, 2Assistant Researcher, 3Director, and 4Researcher, Taipei Zoo, Taipei, Taiwan 11628, Republic of China E-mail: [email protected] Farmland is an important habitat for many amphibians. inhabit farmlands, and so agrobiodiversity is However, the widespread and prolonged use of agro- an important part of global biological diver- chemicals creates predictable difficulties and limitations for the conservation of agrobiodiversity. Farmland is an sity. Owing to its climate and its rice-con- ecosystem in which human forces are greatly involved; suming culture, Taiwan’s farmland consists therefore, conservation of natural resources in agricultural mainly of paddy fields. These fields, along ecosystems must also relate to the existence of humans in with the irrigating canals and farm pools of order to achieve its goal. The Taipei frog Rana taipehensis this agricultural system, have much to do has become a seriously threatened species in Taiwan because of wetland destruction and extensive use of agro- with the area’s amphibian biodiversity. chemicals on farmland. Nowadays, the species can only be However, farmland is traditionally focused found in Taipei, Taoyuan, Tainan and Pingtung Counties. on producing agricultural products, a goal Since 1999, Taipei Zoo has been surveying the distribution that can conflict with the conservation of of Taipei frogs in Sanzhi, a small town in northern Taiwan. -
Batrachochytrium Dendrobatidis And
UNIVERSITY OF CALIFORNIA Los Angeles Assessing the threat of two deadly fungal pathogens (Batrachochytrium dendrobatidis and Batrachochytrium salamandrivorans) to amphibian biodiversity and the impacts of human- mediated movement of an invasive carrier species and climate change A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Environmental Science and Engineering by Tiffany Ann Yap 2016 © Copyright by Tiffany Ann Yap 2016 Abstract of the Dissertation Assessing the threat of two deadly fungal pathogens (Batrachochytrium dendrobatidis and Batrachochytrium salamandrivorans) to amphibian biodiversity and the impacts of human- mediated movement of an invasive carrier species and climate change by Tiffany Ann Yap Doctor of Environmental Science and Engineering University of California, Los Angeles, 2016 Professor Richard F. Ambrose, Co-Chair Professor Vance T. Vredenburg, Co-Chair Batrachochytrium dendrobatidis (Bd), a fungal pathogen that causes chytridiomycosis in amphibians, has infected >500 species and caused declines and extinctions in >200 species. Recently, a second deadly fungal pathogen that also causes chytridiomycosis, Batrachochytrium salamandrivorans (Bsal) was discovered. The presence of these lethal pathogens in international trade threatens amphibian diversity. In this dissertation, I use a novel modeling approach to predict disease risk from Bd and/or Bsal to amphibian populations in North America and Asia by incorporating pathogen habitat suitability, host availability, the potential presence of an invasive carrier species, and pathogen invasion history. First I identify Bsal threat to North American salamanders to be greatest in the Southeast US, the West Coast, and highlands of Mexico. I then ii investigate the compounded risk of Bd and Bsal in North America and find highest relative risk in those same areas and in the Sierra Nevada Mountains and the northern Rocky Mountains. -
Rana: Ranidae): Results of a Phylogenetic Analysis
动 物 学 研 究 2010,Aug. 31(4): 353−360 CN 53-1040/Q ISSN 0254-5853 Zoological Research DOI:10.3724/SP.J.1141.2010.04353 Validity and Systematic Position of Rana altaica (Rana: Ranidae): Results of a Phylogenetic Analysis YANG Jun-Xiao1, 2, ZHOU Wei-Wei2, RAO Ding-Qi2, POYARKOV A Nikolay3, 4, KUZMIN Sergius L5, CHE Jing2 ,* (1. Center for Chinese Endemic Herp-breeding and Conservation Research and Liaoning Key Laboratory of Evolution and Biodiversity, Shenyang Normal University, Shenyang 110034, China; 2. State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, the Chinese Academy of Sciences, Kunming 650223, China; 3. Department of Vertebrate Zoology, Biological faculty, Lomonosov Moscow State University, Leninskiye Gory, Moscow, GSP-1, 119991, Russia; 4. National Museum of Natural History—Naturalis, P. O. Box 9517, 2300 RA Leiden, the Netherlands; 5. A.N. Severtzov Institute of Ecology and Evolution, Russian Academy of Sciences, 33 Leninsky Prospect, 119071 Moscow, Russia) Abstract: In order to evaluate the phylogenetic position and validity of Rana altaica, we investigated the phylogeny of brown frogs in Eurasia by Bayesian Inference and Maximum Parsimony analyses of a fragment from the mitochondrial DNA gene Cytochrome b. Both analyses resolved R. altaica as nesting deeply within R. arvalis. Most samples of the nominal R. altaica from the Altai region and specimens from Central Siberia shared a haplotype with R. arvalis based on the network analysis. The matrilineal relationships suggested that R. altaica should be considered as a junior synonym of R. arvalis. Furthermore, our study suggested that the species group division of Chinese brown frogs should be re-evaluated within a phylogenetic context. -
Division 056
Attachment 4 DIVISION 056 IMPORTATION, POSSESSION, CONFINEMENT, TRANSPORTATION AND SALE OF NONNATIVE WILDLIFE 635–056–0000 Purpose and General Information (1) The purpose of these rules is to protect Oregon’s native wildlife. These rules aim for this goal by regulating human actions involving nonnative wildlife (whether those actions involve trade in nonnative wildlife or involve interaction with nonnative species in the wild). The rules allow private use or ownership of nonnative species to the extent that they do not pose a significant risk of harm to native species. (2) Scientific taxonomic nomenclature and common names reflect the following: (a) Mammals – “Walker’s Mammals of the World”, 6th Edition, R. M. Nowak, 1999. (b) Amphibians and Reptiles – “A Complete Guide to Scientific and Common Names of Reptiles and Amphibians of the World”, N. Frank and E. Ramus, 1996. (c) Birds – “Birds of the World: A Checklist”, J. F. Clements, 1991. (d) Fish (except subfamily Serrisalminae) – “Common and Scientific Names of Fishes from the United States, [and] Canada, and Mexico”, [C.R.Robins, et. al., 1991] 6th Edition, American Fisheries Society Special Publication 29, J. S. Nelson et al., 2004. Subfamily Serrisalminae: “World Fishes Important to North Americans”, American Fisheries Society Special Publication 21, C. R. Robins et al., 1991. (e) Mollusks – “Common and Scientific Names of Aquatic Invertebrates from the United States and Canada: Mollusks”, 2nd Edition, American Fisheries Society Special Publication 26, D. D. Turgeon et al., 1998. Div. 056 - 1 (f) Crustaceans (except whiteleg shrimp) – “Common and Scientific Names of Aquatic Invertebrates from the United States and Canada: Crustaceans”, American Fisheries Society Special Publication [16, A.B. -
Litoria Wilcoxii)
Behavioural Ecology, Reproductive Biology and Colour Change Physiology in the Stony Creek Frog (Litoria wilcoxii) Author Kindermann, Christina Published 2017 Thesis Type Thesis (PhD Doctorate) School Griffith School of Environment DOI https://doi.org/10.25904/1912/1098 Copyright Statement The author owns the copyright in this thesis, unless stated otherwise. Downloaded from http://hdl.handle.net/10072/367513 Griffith Research Online https://research-repository.griffith.edu.au Behavioural ecology, reproductive biology and colour change physiology in the Stony Creek Frog (Litoria wilcoxii) Christina Kindermann B. Sc. (Hons) Griffith University School of Environment Environmental Futures Research Institute Submitted in fulfilment of the requirements of the degree of Doctor of Philosophy July 2016 Abstract Many animals possess the remarkable ability to change their skin colour. Colour change can have several potential functions, including communication, thermoregulation and camouflage. However, while the physiological mechanisms and functional significance of colour change in other vertebrates have been well studied, the role of colour change in amphibians is still relatively unknown and a disconnection between morphology, physiology and function exists in the literature (review presented in chapter 2). In this thesis, I investigate these multidisciplinary components to understand the processes and functions of colour change in stony creek frogs (Litoria wilcoxii), which are known to turn bright yellow during the breeding season. By (1 – Chapter 3) examining the distribution and structure of dermal pigment cells, (2– Chapter 4) determining hormonal triggers of rapid colour change, (3– Chapter 5) investigating seasonal colour, hormone and disease relationships and (4– Chapter 6) determining the evolutionary functions of colour change, I provide a comprehensive explanation of this phenomenon in L. -
Evolutionary and Biogeographic Origins of High Tropical Diversity in Old World Frogs (Ranidae)
ORIGINAL ARTICLE doi:10.1111/j.1558-5646.2009.00610.x EVOLUTIONARY AND BIOGEOGRAPHIC ORIGINS OF HIGH TROPICAL DIVERSITY IN OLD WORLD FROGS (RANIDAE) John J. Wiens,1,2 Jeet Sukumaran,3 R. Alexander Pyron4 and Rafe M. Brown3 1Department of Ecology and Evolution, Stony Brook University, Stony Brook, New York 11794 2E-mail: [email protected] 3Natural History Museum, Biodiversity Research Center, Department of Ecology and Evolutionary Biology, University of Kansas, Dyche Hall, Lawrence, Kansas 66045-7561 4Department of Biology, The Graduate School and University Center, City University of New York, New York, New York 10016 Received May 24, 2008 Accepted November 17, 2008 Differences in species richness between regions are ultimately explained by patterns of speciation, extinction, and biogeographic dispersal. Yet, few studies have considered the role of all three processes in generating the high biodiversity of tropical regions. A recent study of a speciose group of predominately New World frogs (Hylidae) showed that their low diversity in temperate regions was associated with relatively recent colonization of these regions, rather than latitudinal differences in diversification rates (rates of speciation–extinction). Here, we perform parallel analyses on the most species-rich group of Old World frogs (Ranidae; ∼1300 species) to determine if similar processes drive the latitudinal diversity gradient. We estimate a time-calibrated phylogeny for 390 ranid species and use this phylogeny to analyze patterns of biogeography and diversification rates. As in hylids, we find a strong relationship between the timing of colonization of each region and its current diversity, with recent colonization of temperate regions from tropical regions. -
OREGON BULLETIN Supplements the 2014 Oregon Administrative Rules Compilation
OREGON BULLETIN Supplements the 2014 Oregon Administrative Rules Compilation Volume 53, No. 4 April 1, 2014 For February 16, 2014–March 15, 2014 Published by KATE BROWN Secretary of State Copyright 2014 Oregon Secretary of State INFORMATION ABOUT ADMINISTRATIVE RULES General Information November 15 of the previous year. Administrative Rules created or The Administrative Rules Unit, Archives Division, Secretary of changed after publication in the print Compilation will appear in a State publishes the Oregon Administrative Rules Compilation and the subsequent edition of the online Bulletin. These are listed by rule online Oregon Bulletin. The Oregon Administrative Rules number in the Bulletin’s OAR Revision Cumulative Index, which is Compilation is an annual print publication containing complete text updated monthly. The listings specify each rule’s effective date, rule- of Oregon Administrative Rules (OARs) filed through November 15 making action, and the issue of the Bulletin that contains the full text of the previous year. The Oregon Bulletin is a monthly online sup- of the adopted or amended rule. plement that contains rule text adopted or amended after publication Locating Administrative Rule Publications of the print Compilation, as well as Notices of Proposed Rulemak- ing and Rulemaking Hearing. The Bulletin also includes certain non- Printed volumes of the Compilation are deposited in Oregon’s OAR items when they are submitted, such as Executive Orders of the Public Documents Depository Libraries listed in OAR 543-070- Governor, Opinions of the Attorney General and Department of 0000. Complete sets and individual volumes of the printed OAR Environmental Quality cleanup notices. Compilation may be ordered from the Administrative Rules Unit, Archives Division, 800 Summer Street NE, Salem, Oregon 97301, Background on Oregon Administrative Rules (503) 373-0701.