In Situ Formation of Photoactive B-Ring Reduced Chlorophyll Isomer In
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1 Introduction
Introduction 1 1 Introduction Tetrapyrroles belong to a group of molecules with a common structure. They are synthesized in a branched pathway, in which various end products are formed to different amounts. The most abundant cyclic tetrapyrroles are chlorophyll (Chl) and heme, which are characterized by a chelated magnesium and ferrous ion, respectively. Chlorophyll is involved in light absorption and energy transduction during photosynthesis. Heme is a cofactor of hemoglobin, cytochromes, P450 mixed-function oxygenases, and catalases. Other members of the class of tetrapyrroles include siroheme (the prosthetic group of nitrite and sulphite reductases) and phytochromobilin, the chromophore of phytochrome, which is involved in light perception. Tetrapyrrole biosynthesis has been the subject of numerous studies over several decades. But genetic and biochemical characterization of tetrapyrrole biosynthesis has progressed by using approaches to genetically dissect the tetrapyrrole biosynthetic pathway. Pigment-deficient mutants and antisense technology have proved to be useful for examining the mechanisms of metabolic control or for analyzing biochemically the enzymatic steps which are affected by the mutation or by the antisense RNA expression. Tetrapyrrole intermediates are highly photoreactive. They can easily be excited and transfer the energy or electrons to O2. Then reactive oxygen species (ROS) are produced upon exposure to light and oxygen. Under normal growth conditions the risk of photooxidative damage from intermediates in tetrapyrrole biosynthesis is low. Excessive accumulation of such intermediates is the result of deregulation of tetrapyrrole biosynthesis. Toxic effects of porphyrins are evident in human patients with deficiencies of one of the enzymes of heme biosynthesis. These patients are suffering from metabolic diseases, which are called porphyrias (Moore, 1993). -
Anoxygenic Photosynthesis in Photolithotrophic Sulfur Bacteria and Their Role in Detoxication of Hydrogen Sulfide
antioxidants Review Anoxygenic Photosynthesis in Photolithotrophic Sulfur Bacteria and Their Role in Detoxication of Hydrogen Sulfide Ivan Kushkevych 1,* , Veronika Bosáková 1,2 , Monika Vítˇezová 1 and Simon K.-M. R. Rittmann 3,* 1 Department of Experimental Biology, Faculty of Science, Masaryk University, 62500 Brno, Czech Republic; [email protected] (V.B.); [email protected] (M.V.) 2 Department of Biology, Faculty of Medicine, Masaryk University, 62500 Brno, Czech Republic 3 Archaea Physiology & Biotechnology Group, Department of Functional and Evolutionary Ecology, Universität Wien, 1090 Vienna, Austria * Correspondence: [email protected] (I.K.); [email protected] (S.K.-M.R.R.); Tel.: +420-549-495-315 (I.K.); +431-427-776-513 (S.K.-M.R.R.) Abstract: Hydrogen sulfide is a toxic compound that can affect various groups of water microorgan- isms. Photolithotrophic sulfur bacteria including Chromatiaceae and Chlorobiaceae are able to convert inorganic substrate (hydrogen sulfide and carbon dioxide) into organic matter deriving energy from photosynthesis. This process takes place in the absence of molecular oxygen and is referred to as anoxygenic photosynthesis, in which exogenous electron donors are needed. These donors may be reduced sulfur compounds such as hydrogen sulfide. This paper deals with the description of this metabolic process, representatives of the above-mentioned families, and discusses the possibility using anoxygenic phototrophic microorganisms for the detoxification of toxic hydrogen sulfide. Moreover, their general characteristics, morphology, metabolism, and taxonomy are described as Citation: Kushkevych, I.; Bosáková, well as the conditions for isolation and cultivation of these microorganisms will be presented. V.; Vítˇezová,M.; Rittmann, S.K.-M.R. -
TION of BUCKWHEAT. It Has Been Known for a Long Time That Certain
PHOTOSENSITIZATION OF ANIMALS AFTER THE INGES- TION OF BUCKWHEAT. BY CHARLES SHEARD, PH.D., HAROLD D. CAYLOR, M.D., AND CARL SCHLOTTHAUER, D.V.M. (From tke Section on Pkysics and Biophysical Research, tke Section on Surgical Pathology, and the Division of Experimental Palhdogy and Surgery, Mayo Clinic and The Mayo Foundation, Rochester, Minnesota.) (Received for publication,~'March 1, 1928.) It has been known for a long time that certain animals, following the ingestion of various substances, are rendered sensitive to certain types of radiant energy. The present study covers biologic and physical observations on the degree of sensitization, the character of the sensitizing light and the nature of the photodynamic substance of buckwheat. White rabbits, mice, rats, goats, swine, dogs and varicolored guinea pigs were studied. Sunlight, carbon arc lamp (Efka or Hoffman) with Conradty-Norris vacuum carbon electrodes and quartz mercury vapor arcs (Victor X-Ray Corporation), both with and without various filters, were employed for irradiation. All of these sources contain infra-red, visible and ultra-violet radiations. I~SLr~ OF LITERATURE. Considerable literature, especially European, has appeared on the subject of diseases in animals and man brought about by optical sensitization. Somewhat detailed accounts of the contributions relative to diseases due to exogenous sensi- tization are to be found in the brochures by Hausmann and by Mayer. Years ago European stockmen found that in certain animals which had ingested buckwheat (plant or seed), erythema, itching, edema and convulsions developed and, in many cases, paralysis and death, on exposure to out-of-door sunshine. However, untoward symptoms did not arise if the animals were kept indoors or in partial darkness and they recovered from the sensitization induced by eating certain plants if they were removed from the light early in the onset of the symp- toms. -
Myoglobin with Modified Tetrapyrrole Chromophores: Binding Specificity and Photochemistry ⁎ Stephanie Pröll A, Brigitte Wilhelm A, Bruno Robert B, Hugo Scheer A
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Biochimica et Biophysica Acta 1757 (2006) 750–763 www.elsevier.com/locate/bbabio Myoglobin with modified tetrapyrrole chromophores: Binding specificity and photochemistry ⁎ Stephanie Pröll a, Brigitte Wilhelm a, Bruno Robert b, Hugo Scheer a, a Department Biologie I-Botanik, Universität München, Menzingerstr, 67, 80638 München, Germany b Sections de Biophysique des Protéines et des Membranes, DBCM/CEA et URA CNRS 2096, C.E. Saclay, 91191 Gif (Yvette), France Received 2 August 2005; received in revised form 2 March 2006; accepted 28 March 2006 Available online 12 May 2006 Abstract Complexes were prepared of horse heart myoglobin with derivatives of (bacterio)chlorophylls and the linear tetrapyrrole, phycocyanobilin. Structural factors important for binding are (i) the presence of a central metal with open ligation site, which even induces binding of phycocyanobilin, and (ii) the absence of the hydrophobic esterifying alcohol, phytol. Binding is further modulated by the stereochemistry at the isocyclic ring. The binding pocket can act as a reaction chamber: with enolizable substrates, apo-myoglobin acts as a 132-epimerase converting, e.g., Zn-pheophorbide a' (132S) to a (132R). Light-induced reduction and oxidation of the bound pigments are accelerated as compared to solution. Some flexibility of the myoglobin is required for these reactions to occur; a nucleophile is required near the chromophores for photoreduction (Krasnovskii reaction), and oxygen for photooxidation. Oxidation of the bacteriochlorin in the complex and in aqueous solution continues in the dark. © 2006 Elsevier B.V. -
Biofilm Forming Purple Sulfur Bacteria Enrichment from Trunk River
Different biofilm-forming purple sulfur bacteria enriched from Trunk River Xiaolei Liu Abstract Three different types of biofilm were developed on the bottles of purple sulfur bacteria enrichments. The original inoculum is a piece of sea grass covered with purple biofilm that collected from Trunk River during the course. Microscopy imaging showed that two of the three biofilms were apparently composed of two major species. MonoFISH probing supports the recognition of purple sulfur bacteria as Chromatium in the class of gammaproteobacteria which grow together with a deltaproteobacteria species. Such a combination of Chromatium colonize with deltaproteobacteria species is also originally present in the purple biofilm on sea grass. Further work is needed to investigate the potential interactions between these two species. Introduction Purple sulfur bacteria are photosynthetic anearobes in the phylum of Proteobacteria (Fowler et al., 1984), which is capable of fixing carbon dioxide with sulfide other than water as the electron donors. Since oxygen is not produced during their photosynthesis these purple sulfur bacteria are also known as anoxygenic photoautotrophs. Most purple sulfur bacteria synthesize bacteriochlorophyll and carotenoids as their light-harvesting pigment complex (Iba et al., 1988). Because their photosynthesis reQuires anoxic condition and sulfide, these purple sulfur bacteria are often found in organic rich aquatic environments where sulfate reducing heterotrophic bacteria thrive. Both planktonic and benthic species of purple sulfur bacteria exist in different sulfidic environments. In the habitat of stratified meromictic lakes with external sulfate input, such as Green Lake, Mahoney Lake and Lake Cadagno, the phototrophic chemocline microbial communities are often dominated by planktonic purple sulfur bacteria living on sulfide diffused up from organic rich sediment (e.g. -
1.1-Billion-Year-Old Porphyrins Establish a Marine Ecosystem Dominated by Bacterial Primary Producers
1.1-billion-year-old porphyrins establish a marine ecosystem dominated by bacterial primary producers N. Guenelia,1, A. M. McKennab, N. Ohkouchic, C. J. Borehamd, J. Beghine, E. J. Javauxe, and J. J. Brocksa,1 aResearch School of Earth Sciences, Australian National University, Canberra, ACT 2601, Australia; bNational High Magnetic Field Laboratory, Florida State University, Tallahassee, FL 32310-4005; cDepartment of Biogeochemistry, Japan Agency for Marine–Earth Science and Technology, 237-0061 Kanagawa Prefecture, Yokosuka, Natsushimacho, Japan; dGeoscience Australia, Symonston, ACT 2609, Australia; and eDepartment of Geology, Unité de Recherche Geology, University of Liège, 4000 Liege, Belgium Edited by Andrew H. Knoll, Harvard University, Cambridge, MA, and approved June 8, 2018 (received for review March 6, 2018) The average cell size of marine phytoplankton is critical for the the molecular fossils of biological lipids, can provide comple- flow of energy and nutrients from the base of the food web to mentary information about primary producers. For example, higher trophic levels. Thus, the evolutionary succession of primary hydrocarbon fossils of carotenoid pigments extracted from sed- producers through Earth’s history is important for our understand- imentary rocks have been used to detect phototrophic green ing of the radiation of modern protists ∼800 million years ago and (Chlorobiaceae) and purple sulfur bacteria (PSB) (Chromatia- ∼ the emergence of eumetazoan animals 200 million years later. ceae) in 1,640-My-old marine ecosystems (4, 5), while the con- Currently, it is difficult to establish connections between primary centration of eukaryotic steranes, relative to bacterial hopanes, production and the proliferation of large and complex organisms may provide basic information about the ecological relevance of because the mid-Proterozoic (∼1,800–800 million years ago) rock Precambrian algae (6). -
Chlorophyll Biosynthesis
Chlorophyll Biosynthesis: Various Chlorophyllides as Exogenous Substrates for Chlorophyll Synthetase Jürgen Benz and Wolfhart Rüdiger Botanisches Institut, Universität München, Menziger Str. 67, D-8000 München 19 Z. Naturforsch. 36 c, 51 -5 7 (1981); received October 10, 1980 Dedicated to Professor Dr. H. Merxmüller on the Occasion of His 60th Birthday Chlorophyllides a and b, Protochlorophyllide, Bacteriochlorophyllide a, 3-Acetyl-3-devinylchlo- rophyllide a, Pyrochlorophyllide a, Pheophorbide a The esterification of various chlorophyllides with geranylgeranyl diphosphate was investigated as catalyzed by the enzyme chlorophyll synthetase. The enzyme source was an etioplast membrane fraction from etiolated oat seedlings ( Avena sativa L.). The following chlorophyllides were prepared from the corresponding chlorophylls by the chlorophyllase reaction: chlorophyllide a (2) and b (4), bacteriochlorophyllide a (5), 3-acetyl-3-devinylchlorophyllide a (6), and pyro chlorophyllide a (7). The substrates were solubilized with cholate which reproducibly reduced the activity of chlorophyll synthetase by 40-50%. It was found that the following compounds were good substrates for chlorophyll synthetase: chlorophyllide a and b, 3-acetyl-3-devinylchloro- phyllide a, and pyrochlorophyllide a. Only a poor or no reaction was found with protochloro phyllide, pheophorbide a, and bacteriochlorophyllide. This difference of reactivity was not due to distribution differences of the substrates between solution and pelletable membrane fraction. Furthermore, no interference between good and poor substrate was detected. Structural features necessary for chlorophyll synthetase substrates were discussed. Introduction Therefore no exogenous 2 was applied. The only substrate was 2 formed by photoconversion of endo The last steps of chlorophyll a (Chi a) biosynthe genous Protochlide (1) in the etioplast membrane. -
Phototrophic Pigment Production with Microalgae
Phototrophic pigment production with microalgae Kim J. M. Mulders Thesis committee Promotor Prof. Dr R.H. Wijffels Professor of Bioprocess Engineering Wageningen University Co-promotors Dr D.E. Martens Assistant professor, Bioprocess Engineering Group Wageningen University Dr P.P. Lamers Assistant professor, Bioprocess Engineering Group Wageningen University Other members Prof. Dr H. van Amerongen, Wageningen University Prof. Dr M.J.E.C. van der Maarel, University of Groningen Prof. Dr C. Vilchez Lobato, University of Huelva, Spain Dr S. Verseck, BASF Personal Care and Nutrition GmbH, Düsseldorf, Germany This research was conducted under the auspices of the Graduate School VLAG (Advanced studies in Food Technology, Agrobiotechnology, Nutrition and Health Sciences). Phototrophic pigment production with microalgae Kim J. M. Mulders Thesis submitted in fulfilment of the requirement for the degree of doctor at Wageningen University by the authority of the Rector Magnificus Prof. Dr M.J. Kropff, in the presence of the Thesis Committee appointed by the Academic Board to be defended in public on Friday 5 December 2014 at 11 p.m. in the Aula. K. J. M. Mulders Phototrophic pigment production with microalgae, 192 pages. PhD thesis, Wageningen University, Wageningen, NL (2014) With propositions, references and summaries in Dutch and English ISBN 978-94-6257-145-7 Abstract Microalgal pigments are regarded as natural alternatives for food colourants. To facilitate optimization of microalgae-based pigment production, this thesis aimed to obtain key insights in the pigment metabolism of phototrophic microalgae, with the main focus on secondary carotenoids. Different microalgal groups each possess their own set of primary pigments. Besides, a selected group of green algae (Chlorophytes) accumulate secondary pigments (secondary carotenoids) when exposed to oversaturating light conditions. -
Modifications of Protoporphyrin IX Fluorescence During ALA-Based
ARTICLE IN PRESS Medical Laser Application 21 (2006) 291–297 www.elsevier.de/mla Modifications of protoporphyrin IX fluorescence during ALA-based photodynamic therapy of endometriosis Karsten Ko¨niga,Ã, Marie-Therese Wyss-Desserichb, Yona Tadirc, Urs Hallerb, Bruce Trombergc, Michael W. Bernsc, P. Wyssb aFraunhofer Institute of Biomedical Technology (IBMT), Ensheimer Straße 48, 66386 St. Ingbert, Germany bDepartment of Obstetrics and Gynecology, Clinic of Gynecology, Frauenklinikstr. 10, University Hospital Zu¨rich, 8091 Zu¨rich, Switzerland cBeckman Laser Institute and Medical Clinic, University of California, 1002 Health Sciences Road Irvine, Irvine, CA 92612, USA Received 20 June 2006; accepted 31 July 2006 Abstract Modifications of the porphyrin fluorescence during photodynamic treatment of ovarian cells, endometrial adenocarcinoma cells and rat uterus after administration of the porphyrin precursor d-aminolevulinic acid and exposure with 630 nm laser radiation have been studied. The intracellular and intratissue fluorescence was excited with 407 nm radiation of a krypton ion laser and detected by spectral microscopic imaging using a modified microscope equipped with a slow-scan cooled camera and a liquid crystal filter. In particular, singlet oxygen induced effects due to photobleaching as well as formation of chlorin-type fluorescent photoproducts were detected at around 500, 630 and 670 nm. The photodynamically induced fluorescence modifications were found to vary between cell types. The major fluorescence peak of PP IX was photobleached 63% by a phototoxic fluence of about 20–40 J/cm2 in cells and within rat endometrium. Higher fluences were required to bleach the fluorescence at around 670 nm due to the formation of fluorescent photoproducts. -
Surprising Roles for Bilins in a Green Alga Jean-David Rochaix1 Departments of Molecular Biology and Plant Biology, University of Geneva,1211 Geneva, Switzerland
COMMENTARY COMMENTARY Surprising roles for bilins in a green alga Jean-David Rochaix1 Departments of Molecular Biology and Plant Biology, University of Geneva,1211 Geneva, Switzerland It is well established that the origin of plastids which serves as chromophore of phyto- can be traced to an endosymbiotic event in chromes (Fig. 1). An intriguing feature of which a free-living photosynthetic prokaryote all sequenced chlorophyte genomes is that, invaded a eukaryotic cell more than 1 billion although they lack phytochromes, their years ago. Most genes from the intruder genomes encode two HMOXs, HMOX1 were gradually transferred to the host nu- andHMOX2,andPCYA.InPNAS,Duanmu cleus whereas a small number of these genes et al. (6) investigate the role of these genes in were maintained in the plastid and gave the green alga Chlamydomonas reinhardtii rise to the plastid genome with its associated and made unexpected findings. protein synthesizing system. The products of Duanmu et al. first show that HMOX1, many of the genes transferred to the nucleus HMOX2, and PCYA are catalytically active were then retargeted to the plastid to keep it and produce bilins in vitro (6). They also functional. Altogether, approximately 3,000 demonstrate in a very elegant way that these nuclear genes in plants and algae encode proteins are functional in vivo by expressing plastid proteins, whereas chloroplast ge- a cyanobacteriochrome in the chloroplast Fig. 1. Tetrapyrrole biosynthetic pathways. The heme nomes contain between 100 and 120 genes of C. reinhardtii, where, remarkably, the and chlorophyll biosynthetic pathways diverge at pro- (1). A major challenge for eukaryotic pho- photoreceptor is assembled with bound toporphyrin IX (ProtoIX). -
I Topic - Algal Pigments and Algal Classification(ALGAE) Prepared by –Prof.(Dr.)Jainendra Kumar Coordinated By: Prof.(Dr) Shyam Nandan Prasad
Course- M.Sc. Botany Part -I Paper -I Topic - Algal Pigments and algal Classification(ALGAE) Prepared by –Prof.(Dr.)Jainendra Kumar Coordinated by: Prof.(Dr) Shyam Nandan Prasad The algae were broadly divided by F.F.Fritsch (1935) into eleven classes according to their colour - 1. Chlorophyceae or green algae 2. Xanthophyceae or yellow-green algae 3. Chrysophyceae 4. Bacillariophyceae or golden-brown algae 5. Cryptophyceae 6. Dinophyceae 7. Chloromonadineae 8. Eugleninae 9. Phaeophyceae or brown algae 10. Rhodophyceae or red algae, and 11. Myxophyceae or blue-green algae Normally, classification of algae is based on - 1. Nuclear Organization 2. Nature of Cell Wall Components 3. Pigmentation and Photosynthetic Apparatus The pigment is one of the most important criteria used in differentiation of classes in algae. The pigments in algae can be chlorophylls, carotenoids and biloproteins. These pigments are present in sac like structures called thylakoids. The thylakoids are arranged in stacks in the granum of the chloroplasts. Different groups of algae have different types of pigments and organization of thylakoids in chloroplast. The chlorophylls in algae are chlorophyll a, b, c, d and e types. Chlorophyll a is present in all classes of algae. Chlorophyll b is primary pigment of Chlorophyceae and Euglenineae. Chlorophyll c is found in Phaeophyceae and Cryptophyceae. Chlorophyll d is found in Rhodophyceae. Chlorophyll e is confined to Tribonema of Xanthophyceae. Pigments are chemical compounds which reflect only certain wavelengths of visible light. This makes them appear colourful. More important than their reflection of light is the ability of pigments to absorb certain wavelengths. Since each pigment reacts with only a narrow range of the spectrum, it is important for algae to produce pigments of different colours to capture more of the sun's energy. -
Structure of the Biliverdin Radical Intermediate in Phycocyanobilin
Published on Web 01/21/2009 Structure of the Biliverdin Radical Intermediate in Phycocyanobilin:Ferredoxin Oxidoreductase Identified by High-Field EPR and DFT Stefan Stoll,*,† Alexander Gunn,† Marcin Brynda,†,| Wesley Sughrue,†,‡ Amanda C. Kohler,‡,⊥ Andrew Ozarowski,§ Andrew J. Fisher,†,‡ J. Clark Lagarias,‡ and R. David Britt*,† Department of Chemistry and Section of Molecular and Cellular Biology, UniVersity of California DaVis, 1 Shields AVenue, DaVis, California 95616, and National High Magnetic Field Laboratory, Florida State UniVersity, 1800 East Paul Dirac DriVe, Tallahassee, Florida 32310 Received October 31, 2008; E-mail: [email protected] (S.S.); [email protected] (R.D.B.) The cyanobacterial enzyme phycocyanobilin:ferredoxin oxidoreductase (PcyA) catalyzes the two- step four-electron reduction of biliverdin IXR to phycocyanobilin, the precursor of biliprotein chromophores found in phycobilisomes. It is known that catalysis proceeds via paramagnetic radical intermediates, but the structure of these intermediates and the transfer pathways for the four protons involved are not known. In this study, high-field electron paramagnetic resonance (EPR) spectroscopy of frozen solutions and single crystals of the one-electron reduced protein-substrate complex of two PcyA mutants D105N from the cyanobacteria Synechocystis sp. PCC6803 and Nostoc sp. PCC7120 are examined. Detailed analysis of Synechocystis D105N mutant spectra at 130 and 406 GHz reveals a biliverdin radical with a very narrow g tensor with principal values 2.00359(5), 2.00341(5), and 2.00218(5). Using density-functional theory (DFT) computations to explore the possible protonation states of the biliverdin radical, it is shown that this g tensor is consistent with a biliverdin radical where the carbonyl oxygen atoms on both the A and the D pyrroleringsareprotonated.Thisexperimentallconfirmsthereactionmechanismrecentlyproposed(Tu, et al.