The Oral Apparatus of Tetrahymena V

Total Page:16

File Type:pdf, Size:1020Kb

The Oral Apparatus of Tetrahymena V J. Cell Set. 44, 317-333 (1980) 317 Printed in Great Britain © Company of Biologists Limited 1980 THE ORAL APPARATUS OF TETRAHYMENA V. ORAL APPARATUS POLYPEPTIDES AND THEIR DISTRIBUTION R. H. GAVIN Department of Biology, Brooklyn College of The City University of Neto York, Brooklyn, N.Y., U.S.A. SUMMARY Two-dimensional electrophoresis was used to resolve approximately 162 polypeptides from the isolated oral apparatus of Tetrahymena thermophila. The molecular weight range was between 110000 and 15000 Daltons. The polypeptides had apparent isoelectric points between pH 3-3 and pH 7-2. Electrophoretic analysis of isolated ciliary axonemes and fractionated oral ap- paratuses made possible the assignment of polypeptides to structures within the oral apparatus. Approximately 24 polypeptides, including a. and /? tubulins, are probable components of the basal body-basal plate complex. At least 5 of the oral apparatus polypeptides, including a and fl tubulin, are components of the oral apparatus ciliary axonemes. Approximately 138 poly- peptides are components of the oral apparatus framework. INTRODUCTION There is a continuing need for studies that refine our knowledge of the molecular structure of the ciliate cortex and its constituent organelles. The oral apparatus of Tetrahymena is a cortical feeding structure composed of ciliated and non-ciliated basal bodies interconnected by a framework of microtubules and filaments (Fig. 1). The ultrastructure (Nilsson & Williams, 1966; Forer, Nilsson & Zeuthen, 1970; Wolfe, 1970; Rannestad & Williams, 1971; Buhse, Stamler & Corliss, 1973; Gavin, 1977; Sattler & Staehelin, 1979), morphogenesis (Frankel & Williams, 1973) and genetics (Orias & Pollock, 1975; Kaczanowski, 1976; Frankel, Nelsen & Jenkins, 1977; Jerka-Dziadosz & Frankel, 1979; Frankel & Jenkins, 1979) of this cortical organelle complex have been extensively investigated. However, there have been relatively few studies devoted to the molecular composition of the oral apparatus (Rannestad & Williams, 1971; Gavin, 1974; Vaudaux, 1976). One report (Gavin, 1974) showed that in a one-dimensional urea-polyacrylamide system approximately 20 proteins could be resolved from isolated oral apparatuses. In the present paper we report the use of a technique for the separation of poly- peptides in 2 dimensions (O'Farrell, 1975) to resolve approximately 162 polypeptides from the isolated oral apparatus of Tetrahymena. In addition, by making use of a fractionation procedure (Wolfe, 1970) that solubilizes oral apparatus basal bodies while leaving intact a framework of microtubules and filaments (Gavin, 1977), we have shown that about 138 oral apparatus polypeptides are constituents of the frame- work, whereas only 24 polypeptides are basal body fraction components. 3i8 R. H. Gavin urn- - PC -df Fig. i. Diagram of the oral apparatus showing the relationship between oral apparatus basal bodies (open circles) and the fibrillar framework (solid lines). Each membranelle (m) consists of 3 rows of hexagonally arranged ciliated basal bodies. The undulating membrane (ura) consists of 2 rows of basal bodies, of which only the outer row is ciliated. Membranellar connectives (me) interconnect the 3 membranelles. The anterior end of each membranelle is connected to the undulating membrane by cross connectives (cc). The posterior end of each membranelle is connected to the undulating membrane by peripheral connectives (pc). The oral ribs (or) originate at the undulating membrane and join with fibres from the third membranelle to form the deep fibre (df). MATERIALS AND METHODS Culture methods Tetrahymena thermophila (Nanney & McCoy, 1976) was grown at 35 °C in a medium consisting of 1-5 % bacropeptone (Difco) and 0-4% yeast extract (Difco). Oral apparatus isolation The procedures for isolating oral apparatuses were basically those described by Wolfe (1970). However, we have made several minor modifications which we have found to be important for obtaining consistently highly purified oral apparatuses. Cells were grown in bactopeptone supplemented with yeast extract since proteose peptone- Oral apparatus polypeptides 319 grown cells yielded lysates containing flocculent debris which was not removed during the centrifugations through sucrose. After the addition of the isolation medium and Triton X-100 (Wolfe, 1970), cell contents were dispersed, resulting in 'ghosts' which retained cell shape. At this stage the preparation was vigorously stirred (in an ice bath) by means of a magnetic stirrer until all oral apparatuses became detached from the disintegrating pellicle. This step was the most time-consuming, frequently requiring 1-2 h. The suspension was then centrifuged as described by Wolfe (1970). The resulting pellet was vortexed on a vortex mixer and resuspended in isolation medium which contained 2#o% Triton X-100. All subsequent centrifugations were carried out with 2-o% Triton X-100 in the isolation medium. Prior to the final centrifugation the suspension was filtered through a polycarbonate filter (pore size 8-o /tm, Nuclepore Filter Corp., Pleasanton, Calif.). Ciliary axoneme isolation Tetrahymena cilia were isolated according to procedures described by Gibbons (1965). An added step in the procedure was filtration of the isolated cilia suspension through a poly- carbonate filter as described for oral apparatus isolation. The filtrate was centrifuged at 10000 g for 30 min to pellet the cilia. In order to effect demembranation of the ciliary axoneme, the wet cilia pellet was resuspended in the Triton X-100 isolation medium that was used for oral apparatus isolation. The suspension was vigorously vortexed and left in an ice bath for 30 min. Subsequently the suspension was centrifuged at 10000 g for 30 min. The axoneme pellet was washed once with distilled water and retained for electrophoretic analysis. Oral apparatus fractionation Isolated oral apparatuses were resuspended in i-o M KC1 and maintained at 4 °C for 18 h. Subsequently, the suspension was centrifuged at ioooog' for 30 min and the supernatant, which contained solubilized basal bodies (Gavin, 1977), was retained for further analysis. The pellet, which contained the oral apparatus framework (Gavin, 1977), was washed twice in distilled water and retained for further analysis. Protein assays Protein assays were performed as described by Lowry, Rosebrough, Farr & Randall (1951) using serum albumin standards. Radioactive labelling Cells were grown in a medium consisting of 1 % bactopeptone and 01 % yeast extract and containing 5 /iCi/ml of pHJleucine (42 Ci/mM). When the culture reached stationary phase cells were harvested and oral apparatuses isolated. The radioactive cell lysate was retained. In order to determine the extent to which cellular proteins could be adsorbed to isolated oral apparatuses during the isolation procedure, non-radioactive cells were lysed in the radio- active lysate retained from the isolation of labelled oral apparatuses. Prior to use, the radio- active lysate was centrifuged at ioooog for 45 min to remove any remaining labelled oral apparatuses. Oral apparatuses were then isolated from cells that were lysed in the radioactive lysate and subsequently assayed for acid-precipitable radioactivity. For acid precipitations, an aliquot of the desired sample was mixed with 2 ml of cold 10 % TCA and passed through a Millipore filter. The filter was washed with at least 25 ml of cold 5 % TCA, dried and dissolved in Bray's solution (Bray, i960) for scintillation counting. Electrophoresis Chemicals. Acrylamide, A^iV'-methylene bis acrylamide, and AT.TV.iV'.iV'-tetramethylene- diamine were obtained from Eastman Kodak. Ultrapure urea was purchased from Schwarz/ Mann. Ampholines and Coomassie Brilliant Blue R-250 were obtained from Bio-Rad Labora- tories. Glycine, Tris base and ammonium persulphate were obtained from Sigma Chemical Co. 320 R. H. Gavin Preparation of samples. A wet pellet of isolated oral apparatuses was mixed with approxi- mately 4-5 vol. of solubilizing solution consisting of 8 M urea, o-oi M Tris pH 8-o, and 2 % pH range 3-10 ampholines or pH range 5-7 ampholines. This solution solubilized more than 90 % of the oral apparatus protein (Gavin, 1974). The sample was vortexed and left in an ice bath for 30 min. Subsequently the sample was returned to room temperature and clarified by centri- fugation. A small residue remaining in the bottom of the centrifuge tube was discarded. The solubilized protein was then used directly for isoelectric focusing gels. The KCl-soluble oral apparatus fraction was first dialysed at 4 °C against distilled water to remove salt and then dried in vacuo. The powder was dissolved in solubilizing solution as described above. The KC1- insoluble oral apparatus fraction (framework) was solubilized as described for oral apparatuses. All preparations were used for isoelectric focusing within 30 min after solubilization. Isoelectric focusing. Isoelectric focusing was carried out in glass tubes 5 mm x 140 mm or 5 mm x 80 mm using the procedure described by O'Farrell (1975). The gel mixture was as described by O'Farrell except that it contained 5 % ampholines (either pH range 3-10 or pH range 5-7) and detergent was omitted. Gels were prerun for 1 h at 250 V. The sample (500 fig protein in 150 ji\) was then loaded and subjected to electrophoresis at 250 V for 16—18 h at room temperature (24-26 CC). znd-dimension electrophoresis. Isoelectric focusing gels were extruded from the tubes and immediately frozen at — 20 °C. The frozen gel was cut transversely
Recommended publications
  • Wrc Research Report No. 131 Effects of Feedlot Runoff
    WRC RESEARCH REPORT NO. 131 EFFECTS OF FEEDLOT RUNOFF ON FREE-LIVING AQUATIC CILIATED PROTOZOA BY Kenneth S. Todd, Jr. College of Veterinary Medicine Department of Veterinary Pathology and Hygiene University of Illinois Urbana, Illinois 61801 FINAL REPORT PROJECT NO. A-074-ILL This project was partially supported by the U. S. ~epartmentof the Interior in accordance with the Water Resources Research Act of 1964, P .L. 88-379, Agreement No. 14-31-0001-7030. UNIVERSITY OF ILLINOIS WATER RESOURCES CENTER 2535 Hydrosystems Laboratory Urbana, Illinois 61801 AUGUST 1977 ABSTRACT Water samples and free-living and sessite ciliated protozoa were col- lected at various distances above and below a stream that received runoff from a feedlot. No correlation was found between the species of protozoa recovered, water chemistry, location in the stream, or time of collection. Kenneth S. Todd, Jr'. EFFECTS OF FEEDLOT RUNOFF ON FREE-LIVING AQUATIC CILIATED PROTOZOA Final Report Project A-074-ILL, Office of Water Resources Research, Department of the Interior, August 1977, Washington, D.C., 13 p. KEYWORDS--*ciliated protozoa/feed lots runoff/*water pollution/water chemistry/Illinois/surface water INTRODUCTION The current trend for feeding livestock in the United States is toward large confinement types of operation. Most of these large commercial feedlots have some means of manure disposal and programs to prevent runoff from feed- lots from reaching streams. However, there are still large numbers of smaller feedlots, many of which do not have adequate facilities for disposal of manure or preventing runoff from reaching waterways. The production of wastes by domestic animals was often not considered in the past, but management of wastes is currently one of the largest problems facing the livestock industry.
    [Show full text]
  • Screening Snake Venoms for Toxicity to Tetrahymena Pyriformis Revealed Anti-Protozoan Activity of Cobra Cytotoxins
    toxins Article Screening Snake Venoms for Toxicity to Tetrahymena Pyriformis Revealed Anti-Protozoan Activity of Cobra Cytotoxins 1 2 3 1, Olga N. Kuleshina , Elena V. Kruykova , Elena G. Cheremnykh , Leonid V. Kozlov y, Tatyana V. Andreeva 2, Vladislav G. Starkov 2, Alexey V. Osipov 2, Rustam H. Ziganshin 2, Victor I. Tsetlin 2 and Yuri N. Utkin 2,* 1 Gabrichevsky Research Institute of Epidemiology and Microbiology, ul. Admirala Makarova 10, Moscow 125212, Russia; fi[email protected] 2 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, ul. Miklukho-Maklaya 16/10, Moscow 117997, Russia; [email protected] (E.V.K.); damla-sofi[email protected] (T.V.A.); [email protected] (V.G.S.); [email protected] (A.V.O.); [email protected] (R.H.Z.); [email protected] (V.I.T.) 3 Mental Health Research Centre, Kashirskoye shosse, 34, Moscow 115522, Russia; [email protected] * Correspondence: [email protected] or [email protected]; Tel.: +7-495-3366522 Deceased. y Received: 10 April 2020; Accepted: 13 May 2020; Published: 15 May 2020 Abstract: Snake venoms possess lethal activities against different organisms, ranging from bacteria to higher vertebrates. Several venoms were shown to be active against protozoa, however, data about the anti-protozoan activity of cobra and viper venoms are very scarce. We tested the effects of venoms from several snake species on the ciliate Tetrahymena pyriformis. The venoms tested induced T. pyriformis immobilization, followed by death, the most pronounced effect being observed for cobra Naja sumatrana venom. The active polypeptides were isolated from this venom by a combination of gel-filtration, ion exchange and reversed-phase HPLC and analyzed by mass spectrometry.
    [Show full text]
  • Of a Eukaryote, Tetrahymena Pyriformis (Evolution of Repeated Genes/Amplification/DNA RNA Hybridization/Maero- and Micronuclei) MENG-CHAO YAO, ALAN R
    Proc. Nat. Acad. Sci. USA Vol. 71, No. 8, pp. 3082-3086, August 1974 A Small Number of Cistrons for Ribosomal RNA in the Germinal Nucleus of a Eukaryote, Tetrahymena pyriformis (evolution of repeated genes/amplification/DNA RNA hybridization/maero- and micronuclei) MENG-CHAO YAO, ALAN R. KIMMEL, AND MARTIN A. GOROVSKY Department of Biology, University of Rochester, Rochester, New York 14627 Communicated by Joseph G. Gall, May 31, 1974 ABSTRACT The percentage of DNA complementary repeated sequences (5, 8). To our knowledge, little evidence to 25S and 17S rRNA has been determined for both the exists to support any of these hypotheses. macro- and micronucleus of the ciliated protozoan, Tetra- hymena pyriformis. Saturation levels obtained by DNA - The micro- and macronuclei of the ciliated protozoan, RNA hybridization indicate that approximately 200 Tetrdhymena pyriformis are analogous to the germinal and copies of the gene for rRNA per haploid genome were somatic nuclei of higher eukaryotes. While both nuclei are present in macronuclei. The saturation level obtained derived from the same zygotic nucleus during conjugation, with DNA extracted from isolated micronuclei was only the genetic continuity of 5-10% of the level obtained with DNA from macronuclei. only the micronucleus maintains After correction for contamination of micronuclear DNA this organism. The macronucleus is responsible for virtually by DNA from macronuclei, only a few copies (possibly all of the transcriptional activity during growth and division only 1) of the gene for rRNA are estimated to be present in and is capable of dividing an indefinite number of times during micronuclei. Micronuclei are germinal nuclei.
    [Show full text]
  • Subcellular Localization of Dinoflagellate Polyketide Synthases and Fatty Acid Synthase Activity1
    J. Phycol. 49, 1118–1127 (2013) © Published 2013. This article is a U.S. Government work and is in the public domain in the U.S.A. DOI: 10.1111/jpy.12120 SUBCELLULAR LOCALIZATION OF DINOFLAGELLATE POLYKETIDE SYNTHASES AND FATTY ACID SYNTHASE ACTIVITY1 Frances M. Van Dolah,2 Mackenzie L. Zippay Marine Biotoxins Program, NOAA Center for Coastal Environmental Health and Biomolecular Research, Charleston, South Carolina 29412, USA Marine Biomedical and Environmental Sciences, Medical University of South Carolina, Charleston, South Carolina 29412, USA Laura Pezzolesi Interdepartmental Research Centre for Environmental Science (CIRSA), University of Bologna, Ravenna 48123, Italy Kathleen S. Rein Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, USA Jillian G. Johnson Marine Biotoxins Program, NOAA Center for Coastal Environmental Health and Biomolecular Research, Charleston, South Carolina 29412, USA Marine Biomedical and Environmental Sciences, Medical University of South Carolina, Charleston, South Carolina 29412, USA Jeanine S. Morey, Zhihong Wang Marine Biotoxins Program, NOAA Center for Coastal Environmental Health and Biomolecular Research, Charleston, South Carolina 29412, USA and Rossella Pistocchi Interdepartmental Research Centre for Environmental Science (CIRSA), University of Bologna, Ravenna 48123, Italy Dinoflagellates are prolific producers of polyketide related to fatty acid synthases (FAS), we sought to secondary metabolites. Dinoflagellate polyketide determine if fatty acid biosynthesis colocalizes with synthases (PKSs) have sequence similarity to Type I either chloroplast or cytosolic PKSs. [3H]acetate PKSs, megasynthases that encode all catalytic domains labeling showed fatty acids are synthesized in the on a single polypeptide. However, in dinoflagellate cytosol, with little incorporation in chloroplasts, PKSs identified to date, each catalytic domain resides consistent with a Type I FAS system.
    [Show full text]
  • Ultrastructure of Endosymbiotic Chlorella in a Vorticella
    DNA CONTENTOF DOUBLETParamecium 207 scott DM, ed., Methods in Cell Physiology, Academic Press, New cleocytoplasmic ratio requirements for the initiation of DNA repli- York, 4, 241-339. cation and fission in Tetrahymena. Cell Tissue Kinet. 9, 110-30. 27. ~ 1975. The Paramecium aurelia complex of 14 30. Yao MC, Gorovsky MA. 1974. Comparison of the sequence sibling species. Trans. Am. Micrnsc. SOL. 94, 155-78. of macro- and micronuclear DNA of Tetrahymena pyriformis. 28. Woodward J, Gelher G, Swift H. 1966. Nucleoprotein Chromosomn 48, 1-18. changes during the mitotic cycle in Paramecium aurelia. Exp. Cell 31. Zech L. 1966. Dry weight and DNA content in sisters Res. 23, 258-64. of Bursaria truncatella during the interdivision interval. Exp. Cell 29. Worthington DH, Salamone M, Nachtwey DS. 1975. Nu- Res. 44, 599-605. J. Protorool. 25(2) 1978 pp. 207-210 0 1978 by the Socitky of Protozoologists Ultrastructure of Endosymbiotic Chlorella in a Vorticella LINDA E. GRAHAM* and JAMES M. GRAHAM? “Department of Botany, University of Witconsin, Madison, Wisconsin 53706 and +Division of Biological Sciences, University of Micliigan, Ann Arbor, Michigan 48109 SYNOPSIS. Observations were made on the ultrastructure of a species of Vorticella containing endosymbiotic Chlorella The Vorticella, which were collected from nature, bore conspicuous tubercles of irregular size and distribution on the pel- licle. Each endosymbiotic algal cell was located in a separate vacuole and possessed a cell wall and cup-shaped chloroplast \\ith a large pyrenoid. The pyrenoid was bisected by thylakoids and surrounded by starch plates. No dividing or degenerat- ing algal cells were observed.
    [Show full text]
  • Tetrahymena As a Unicellular Model Eukaryote: Genetic and Genomic Tools
    REVIEW GENETIC TOOLBOX Tetrahymena as a Unicellular Model Eukaryote: Genetic and Genomic Tools Marisa D. Ruehle,*,1 Eduardo Orias,† and Chad G. Pearson* *Department of Cell and Developmental Biology, University of Colorado Anschutz Medical Campus, Aurora, Colorado, 80045, and †Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, California 93106 ABSTRACT Tetrahymena thermophila is a ciliate model organism whose study has led to important discoveries and insights into both conserved and divergent biological processes. In this review, we describe the tools for the use of Tetrahymena as a model eukaryote, including an overview of its life cycle, orientation to its evolutionary roots, and methodological approaches to forward and reverse genetics. Recent genomic tools have expanded Tetrahymena’s utility as a genetic model system. With the unique advantages that Tetrahymena provide, we argue that it will continue to be a model organism of choice. KEYWORDS Tetrahymena thermophila; ciliates; model organism; genetics; amitosis; somatic polyploidy ENETIC model systems have a long-standing history as cost-effective laboratory handling, and its accessibility to both Gimportant tools to discover novel genes and processes in forward and reverse genetics. Despite its affectionate reference cell and developmental biology. The ciliate Tetrahymena ther- as “pond scum” (Blackburn 2010), the beauty of Tetrahymena mophila is a model system that combines the power of for- as a genetic model organism is displayed in many lights. ward and reverse genetics with a suite of useful biochemical Tetrahymena has a long and distinguished history in the and cell biological attributes. Moreover, Tetrahymena are discovery of broad biological paradigms (Figure 2), begin- evolutionarily divergent from the commonly studied organ- ning with the discovery of the first microtubule motor, dynein isms in the opisthokont lineage, permitting examination of (Gibbons and Rowe 1965).
    [Show full text]
  • Protozoa: Outline Classification
    Protozoa: Outline Classification 1. Classification of Protozoa 2. Diagnostic Features of Protozoa 3. Scheme of Classification of Protozoa 4. Systematic Resume of Protozoa 1. Classification of Protozoa: Until the early 1970’s, all living organisms were allocated one or the other of two kingdoms — Plant or Animal. Whether an organism was uni- or multi-cellular, or whether prokaryotic or eukaryotic, were not considered relevant to this fundamental division of life. Therefore, under kingdom animal, the multicellular animals comprised the metazoa while the unicellular, the protozoa. Such a two-kingdom system suffers from a number of drawbacks. To name a few, it does not reflect any real phylogenetic dichotomy and the two categories are not really distinguishable. In the case of euglenoid flagellates, they have been considered under both animals and plants. The two kingdom system is thus not a practical working scheme. R. H. Whittaker in 1969 had divided all living things into five kingdoms — Monera, Protista, Plantae, Fungi and Animalia. While Monera is specialized at the subcellular or biochemical level, the higher organisms (Plantae, Fungi and Animalia) are specialized at the tissue level of organization. Between these two levels, the Protista is specialized at the cellular level. Protozoa, the name coined by Goldfuss (1820), containing about 80,000 species, certainly belong to Protista that exhibits animal like mode of nutrition (Phagocytic hetero-trophy). They have been assigned the sub- kingdom category. However, according to some (Barnes et al, 1993), ‘Protozoa’ has for some time ceased to be regarded as a valid or useful grouping of organisms. Etymology: Greek: protos, first; zoon, animal.
    [Show full text]
  • Electrical Responses of the Carnivorous Ciliate Didinium Nasutum in Relation to Discharge of the Extrusive Organelles
    J. exp. Biol. 119, 211-224 (1985) 211 Printed in Great Britain © The Company of Biologists Limited 1985 ELECTRICAL RESPONSES OF THE CARNIVOROUS CILIATE DIDINIUM NASUTUM IN RELATION TO DISCHARGE OF THE EXTRUSIVE ORGANELLES BY RITSUO HARA, HIROSHI ASAI Department of Physics, Waseda University, Tokyo 160, Japan AND YUTAKA NAITOH Institute of Biological Sciences, University ofTsukuba, Ibaraki 305, Japan Accepted 28 May 1985 SUMMARY 1. The carnivorous ciliate Didinium nasutum discharged its extrusive organelles when a strong inward current was injected into the cell in the presence of external Ca2+ ions. 2. In the absence of external Ca2+ ions, the strong inward current produced fusion of the apex membrane of the proboscis. 3. External application of Ca2+ ions after the fusion of the apex mem- brane produced discharge of the organelles. 4. An increase in Ca2"1" concentration around the organelles seems to cause discharge of the organelles. 5. Ca2+ concentration threshold for the discharge of the pexicysts seems to be lower than that for the toxicysts. 6. External Ca2+ ions were not necessary for discharge of the organelles upon contact with Paramecium. 7. Chemical interaction of the apex membrane with Paramecium mem- brane may cause intracellular release of Ca2+ ions from hypothetical Ca2+ storage sites around the organelles. 8. A small hyperpolarizing response seen before the discharge upon con- tact with Paramecium seems to correlate with the chemical interaction, 9. The depolarizing spike response associated with discharge of the organelles is caused by the depolarizing mechanoreceptor potential evoked by mechanical stimulation of the proboscis membrane by the discharging organelles.
    [Show full text]
  • Unicellular Eukaryotes As Models in Cell and Molecular Biology
    Unicellular Eukaryotes as Models in Cell and Molecular Biology: Critical Appraisal of Their Past and Future Value Martin Simon*, Helmut Plattner†,1 *Molecular Cellular Dynamics, Centre of Human and Molecular Biology, Saarland University, Saarbru¨cken, Germany †Faculty of Biology, University of Konstanz, Konstanz, Germany 1Corresponding author: e-mail address: [email protected] Contents 1. Introduction 142 2. What is Special About Unicellular Models 143 2.1 Unicellular models 144 2.2 Unicellular models: Examples, pitfals, and perspectives 148 3. Unicellular Models for Organelle Biogenesis 151 3.1 Biogenesis of mitochondria in yeast 152 3.2 Biogenesis of secretory organelles, cilia, and flagella 152 3.3 Phagocytotic pathway 153 3.4 Qualifying for model system by precise timing 155 3.5 Free-living forms as models for pathogenic forms 157 4. Models for Epigenetic Phenomena 158 4.1 Epigenetic phenomena from molecules to ultrastructure 161 4.2 Models for RNA-mediated epigenetic phenomena 163 4.3 Excision of IESs during macronuclear development: scnRNA model 170 4.4 Maternal RNA controlling DNA copy number 172 4.5 Maternal RNA matrices providing template for DNA unscrambling in Oxytricha 172 4.6 Impact of epigenetic studies with unicellular models 173 5. Exploring Potential of New Model Systems 175 5.1 Human diseases as new models 175 5.2 Protozoan models: Once highly qualified Now disqualified? 178 5.3 Boon and bane of genome size: Small versus large 179 5.4 Birth and death of nuclei, rather than of cells 183 5.5 Special aspects 184 6. Epilogue 185 Acknowledgment 186 References 186 141 142 Abstract Unicellular eukaryotes have been appreciated as model systems for the analysis of cru- cial questions in cell and molecular biology.
    [Show full text]
  • Parasites on Different Ornamental Fish Species in Turkey
    7(2): 114-120 (2013) DOI: 10.3153/jfscom.2013012 Journal of FisheriesSciences.com E-ISSN 1307-234X © 2013 www.fisheriessciences.com SHORT COMMUNICATION KISA BİLGİLENDİRME PARASITES ON DIFFERENT ORNAMENTAL FISH SPECIES IN TURKEY Şevki Kayış1∗, Fikri Balta1, Ramazan Serezli2, Akif Er1 1Recep Tayyip Erdoğan University, Faculty of Fisheries Sciences, Rize 2İzmir Katip Çelebi University, Faculty of Fisheries Sciences, İzmir Abstract: Different ornamental fish species, astronot Astronotus ocellatus (n=3), goldfish Carassius au- ratus (n=11), discus Symphsodon discus, (n=3), beta Betta splendens, (n=2), guppy Poecilia reticulata, (n=5), convict cichlid Cichlasoma nigrofasciatum, (n=13), blue streak hap Labi- dochromis caeruleus, (n=8), angelfish Pterophyllum scalare, (n=2), black molly Poecilia sphenops, (n=3) and severum Heros efasciatus, (n=5) were sampled from Turkey between 2009 and 2010. Dactylogyrus sp., Gyrodactylus sp. (Monogenea), Epistylis sp. Chilodonella cyprini, Ichthyophthirius multifiliis, Tetrahymena sp., Trichodina spp., Vorticella sp. (Ciliates), Hexamita sp., Ichthyobodo necator (flagellates) and Piscinoodinium pillulare (Dinoflagellate) were identified from those sampled fish. I. multifiliis, I. necator and Trichodina spp. were ob- served as highest prevalence (16.36%) in all parasites. From a total 55 examined fishes, 50 (90.90%) fish were parasitized. Vorticella sp. was reported as a first record from the gills of Cichlasoma nigrofasciatum and also Piscinoodinium pillulare was reported for the first time from Betta splendens
    [Show full text]
  • Spatial and Temporal Distribution of Protozoa at Cueva De Los Riscos, Quere´Taro, Me´Xico
    I. Sigala-Regalado, R. Maye´n-Estrada, and J. B. Morales-Malacara – Spatial and temporal distribution of protozoa at Cueva de Los Riscos, Quere´taro, Me´xico. Journal of Cave and Karst Studies, v. 73, no. 2, p. 55–62. DOI: 10.4311/jcks2009mb121 SPATIAL AND TEMPORAL DISTRIBUTION OF PROTOZOA AT CUEVA DE LOS RISCOS, QUERE´ TARO, ME´ XICO ITZEL SIGALA-REGALADO1,ROSAURA MAYE´ N-ESTRADA1,2, AND JUAN B. MORALES-MALACARA3,4 Abstract: Protozoa are important members of ecosystems, but protozoa that inhabit caves are poorly known worldwide. In this work, we present data on the record and distribution of thirteen protozoa species in four underground biotopes (water, soil, bat guano, and moss), at Cueva de Los Riscos. The samples were taken in six different months over more than a year. Protozoa species were ciliates (eight species), flagellates (three species), amoeboid (one species), and heliozoan (one species). Five of these species are reported for the first time inside cave systems anywhere, and an additional three species are new records for Mexican caves. Colpoda was the ciliate genera found in all cave zones sampled, and it inhabited the four biotopes together with Vorticella. The biotopes with the highest specific richness were the moss, sampled near the main cave entrance, and the temporary or permanent water bodies, with ten species each. The greatest number of species was observed in April 2006 (dry season). With the exception of water, all biotopes are studied for the first time. INTRODUCTION The protozoan trophozoite or cyst phase enters caves in water flow or infiltration through soil, in air currents, and A great extent of Mexican territory is formed by by troglophile fauna present in the cave (Golemansky and sedimentary rocks that permit the formation of caves, but Bonnet, 1994) and accidental or trogloxene organisms.
    [Show full text]
  • Electron Microscopical Studies of the Life Cycle of Ichthyophthirius Multifiliis Ouquetf
    University of Montana ScholarWorks at University of Montana Graduate Student Theses, Dissertations, & Professional Papers Graduate School 1984 Electron microscopical studies of the life cycle of Ichthyophthirius multifiliis ouquetF Mark Geisslinger The University of Montana Follow this and additional works at: https://scholarworks.umt.edu/etd Let us know how access to this document benefits ou.y Recommended Citation Geisslinger, Mark, "Electron microscopical studies of the life cycle of Ichthyophthirius multifiliis ouquet"F (1984). Graduate Student Theses, Dissertations, & Professional Papers. 7460. https://scholarworks.umt.edu/etd/7460 This Thesis is brought to you for free and open access by the Graduate School at ScholarWorks at University of Montana. It has been accepted for inclusion in Graduate Student Theses, Dissertations, & Professional Papers by an authorized administrator of ScholarWorks at University of Montana. For more information, please contact [email protected]. COPYRIGHT ACT OF 1976 This is an unpublished manuscript in which copyright s u b ­ s i s t s . Any further reprinting of its contents must be ap proved BY THE AUTHOR. Mansfield Library University of MONTANA Date: I D S..4 ELECTRON MICROSCOPICAL STUDIES OF THE LIFE CYCLE OF ICHTHYOPHTHIRIUS MULTIFILEIS FOUQUET By Mark Gelsslinger B.S. Livingston College, Rutgers University, 1981 Presented in partial fulfillment of the requirements for the degree of Master of Arts University of Montana 1984 Approved by; Chairman, Board of Examiners DéSn, Graduate WRool _________ i r - - / > ' Date UMI Number: EP38261 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted.
    [Show full text]